Py04_0007 PWY-5381 pyridine nucleotide cycling (plants) Py04_0009 PWY-101 photosynthesis light reactions Py04_0009 PWY-7230 ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic) Py04_0018 PWY-1042 glycolysis IV (plant cytosol) Py04_0018 PWY-5484 glycolysis II (from fructose 6-phosphate) Py04_0018 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Py04_0018 PWY-7003 glycerol degradation to butanol Py04_0023 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Py04_0043 PWY-4261 glycerol degradation I Py04_0054 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Py04_0071 PWY-5316 nicotine biosynthesis Py04_0071 PWY-5381 pyridine nucleotide cycling (plants) Py04_0071 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde Py04_0071 PWY-7342 superpathway of nicotine biosynthesis Py04_0072 PWY-5316 nicotine biosynthesis Py04_0072 PWY-7342 superpathway of nicotine biosynthesis Py04_0073 PWY-5316 nicotine biosynthesis Py04_0073 PWY-7342 superpathway of nicotine biosynthesis Py04_0074 PWY-1622 formaldehyde assimilation I (serine pathway) Py04_0074 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Py04_0074 PWY-5913 TCA cycle VI (obligate autotrophs) Py04_0074 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Py04_0074 PWY-6146 Methanobacterium thermoautotrophicum biosynthetic metabolism Py04_0074 PWY-6549 L-glutamine biosynthesis III Py04_0074 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Py04_0074 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Py04_0074 PWY-7124 ethylene biosynthesis V (engineered) Py04_0081 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Py04_0081 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Py04_0081 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Py04_0089 PWY-6349 CDP-archaeol biosynthesis Py04_0108 PWY-1042 glycolysis IV (plant cytosol) Py04_0108 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Py04_0108 PWY-5484 glycolysis II (from fructose 6-phosphate) Py04_0108 PWY-5723 Rubisco shunt Py04_0108 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Py04_0108 PWY-6886 1-butanol autotrophic biosynthesis Py04_0108 PWY-6901 superpathway of glucose and xylose degradation Py04_0108 PWY-7003 glycerol degradation to butanol Py04_0108 PWY-7124 ethylene biosynthesis V (engineered) Py04_0108 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Py04_0144 PWY-622 starch biosynthesis Py04_0150 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Py04_0150 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Py04_0150 PWY-6268 adenosylcobalamin salvage from cobalamin Py04_0150 PWY-6269 adenosylcobalamin salvage from cobinamide II Py04_0152 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Py04_0160 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Py04_0160 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Py04_0173 PWY-5484 glycolysis II (from fructose 6-phosphate) Py04_0177 PWY-6703 preQ0 biosynthesis Py04_0178 PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) Py04_0182 PWY-40 putrescine biosynthesis I Py04_0182 PWY-6305 putrescine biosynthesis IV Py04_0191 PWY-5743 3-hydroxypropanoate cycle Py04_0191 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Py04_0191 PWY-6728 methylaspartate cycle Py04_0191 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Py04_0209 PWY-6784 cellulose and hemicellulose degradation (cellulolosome) Py04_0215 PWY-6834 spermidine biosynthesis III Py04_0227 PWY-6700 queuosine biosynthesis Py04_0244 PWY-6829 tRNA methylation (yeast) Py04_0244 PWY-7285 methylwyosine biosynthesis Py04_0244 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Py04_0245 PWY-6823 molybdenum cofactor biosynthesis Py04_0252 PWY-6349 CDP-archaeol biosynthesis Py04_0255 PWY-6823 molybdenum cofactor biosynthesis Py04_0275 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation Py04_0275 PWY-5532 adenosine nucleotides degradation IV Py04_0275 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Py04_0288 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Py04_0291 PWY-6148 tetrahydromethanopterin biosynthesis Py04_0305 PWY-6123 inosine-5'-phosphate biosynthesis I Py04_0305 PWY-6124 inosine-5'-phosphate biosynthesis II Py04_0305 PWY-7234 inosine-5'-phosphate biosynthesis III Py04_0306 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Py04_0306 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Py04_0306 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Py04_0306 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Py04_0310 PWY-6749 CMP-legionaminate biosynthesis I Py04_0315 PWY-6823 molybdenum cofactor biosynthesis Py04_0315 PWY-6891 thiazole biosynthesis II (Bacillus) Py04_0315 PWY-6892 thiazole biosynthesis I (E. coli) Py04_0315 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis Py04_0333 PWY-7219 adenosine ribonucleotides de novo biosynthesis Py04_0334 PWY-7219 adenosine ribonucleotides de novo biosynthesis Py04_0339 PWY-6703 preQ0 biosynthesis Py04_0343 PWY-5686 UMP biosynthesis Py04_0350 PWY-3801 sucrose degradation II (sucrose synthase) Py04_0350 PWY-5054 sorbitol biosynthesis I Py04_0350 PWY-5384 sucrose degradation IV (sucrose phosphorylase) Py04_0350 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Py04_0350 PWY-5659 GDP-mannose biosynthesis Py04_0350 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Py04_0350 PWY-621 sucrose degradation III (sucrose invertase) Py04_0350 PWY-622 starch biosynthesis Py04_0350 PWY-6531 mannitol cycle Py04_0350 PWY-6981 chitin biosynthesis Py04_0350 PWY-7238 sucrose biosynthesis II Py04_0350 PWY-7347 sucrose biosynthesis III Py04_0350 PWY-7385 1,3-propanediol biosynthesis (engineered) Py04_0351 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Py04_0351 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Py04_0351 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Py04_0352 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Py04_0352 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Py04_0352 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Py04_0353 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Py04_0353 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Py04_0353 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Py04_0355 PWY-6938 NADH repair Py04_0362 PWY-4983 L-citrulline-nitric oxide cycle Py04_0362 PWY-4984 urea cycle Py04_0362 PWY-5 canavanine biosynthesis Py04_0362 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Py04_0362 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Py04_0363 PWY-4983 L-citrulline-nitric oxide cycle Py04_0363 PWY-4984 urea cycle Py04_0363 PWY-5 canavanine biosynthesis Py04_0363 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Py04_0363 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Py04_0371 PWY-1042 glycolysis IV (plant cytosol) Py04_0371 PWY-1622 formaldehyde assimilation I (serine pathway) Py04_0371 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Py04_0371 PWY-5484 glycolysis II (from fructose 6-phosphate) Py04_0371 PWY-5723 Rubisco shunt Py04_0371 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Py04_0371 PWY-6886 1-butanol autotrophic biosynthesis Py04_0371 PWY-6901 superpathway of glucose and xylose degradation Py04_0371 PWY-7003 glycerol degradation to butanol Py04_0371 PWY-7124 ethylene biosynthesis V (engineered) Py04_0371 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Py04_0376 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Py04_0376 PWY-5686 UMP biosynthesis Py04_0387 PWY-5392 reductive TCA cycle II Py04_0387 PWY-5537 pyruvate fermentation to acetate V Py04_0387 PWY-5538 pyruvate fermentation to acetate VI Py04_0387 PWY-5690 TCA cycle II (plants and fungi) Py04_0387 PWY-5913 TCA cycle VI (obligate autotrophs) Py04_0387 PWY-6728 methylaspartate cycle Py04_0387 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Py04_0387 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Py04_0389 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Py04_0397 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation Py04_0416 PWY-6519 8-amino-7-oxononanoate biosynthesis I Py04_0416 PWY-6578 8-amino-7-oxononanoate biosynthesis III Py04_0416 PWY-7147 8-amino-7-oxononanoate biosynthesis II Py04_0418 PWY-6689 tRNA splicing Py04_0435 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Py04_0435 PWY-6596 adenosine nucleotides degradation I Py04_0435 PWY-7221 guanosine ribonucleotides de novo biosynthesis Py04_0438 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Py04_0449 PWY-6482 diphthamide biosynthesis (archaea) Py04_0449 PWY-7546 diphthamide biosynthesis (eukaryotes) Py04_0451 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Py04_0451 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Py04_0451 PWY-6269 adenosylcobalamin salvage from cobinamide II Py04_0454 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Py04_0454 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Py04_0454 PWY-6269 adenosylcobalamin salvage from cobinamide II Py04_0466 PWY-5340 sulfate activation for sulfonation Py04_0470 PWY-5278 sulfite oxidation III Py04_0470 PWY-5340 sulfate activation for sulfonation Py04_0470 PWY-6683 sulfate reduction III (assimilatory) Py04_0470 PWY-6932 selenate reduction Py04_0480 PWY-3221 dTDP-L-rhamnose biosynthesis II Py04_0480 PWY-6808 dTDP-D-forosamine biosynthesis Py04_0480 PWY-6942 dTDP-D-desosamine biosynthesis Py04_0480 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis Py04_0480 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis Py04_0480 PWY-6974 dTDP-L-olivose biosynthesis Py04_0480 PWY-6976 dTDP-L-mycarose biosynthesis Py04_0480 PWY-7104 dTDP-L-megosamine biosynthesis Py04_0480 PWY-7301 dTDP-β-L-noviose biosynthesis Py04_0480 PWY-7312 dTDP-D-β-fucofuranose biosynthesis Py04_0480 PWY-7315 dTDP-N-acetylthomosamine biosynthesis Py04_0480 PWY-7316 dTDP-N-acetylviosamine biosynthesis Py04_0480 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis Py04_0480 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis Py04_0480 PWY-7414 dTDP-α-D-mycaminose biosynthesis Py04_0480 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis Py04_0485 PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) Py04_0494 PWY-5340 sulfate activation for sulfonation Py04_0495 PWY-5278 sulfite oxidation III Py04_0495 PWY-5340 sulfate activation for sulfonation Py04_0495 PWY-6683 sulfate reduction III (assimilatory) Py04_0495 PWY-6932 selenate reduction Py04_0506 PWY-7234 inosine-5'-phosphate biosynthesis III Py04_0507 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Py04_0507 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Py04_0507 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Py04_0511 PWY-6123 inosine-5'-phosphate biosynthesis I Py04_0511 PWY-7234 inosine-5'-phosphate biosynthesis III Py04_0513 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Py04_0513 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Py04_0513 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Py04_0515 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Py04_0515 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Py04_0515 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Py04_0515 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Py04_0515 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Py04_0515 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Py04_0515 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Py04_0515 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Py04_0557 PWY-6807 xyloglucan degradation II (exoglucanase) Py04_0584 PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde Py04_0584 PWY-6309 L-tryptophan degradation XI (mammalian, via kynurenine) Py04_0585 PWY-5041 S-adenosyl-L-methionine cycle II Py04_0612 PWY-7294 xylose degradation IV Py04_0612 PWY-7295 L-arabinose degradation IV Py04_0623 PWY-381 nitrate reduction II (assimilatory) Py04_0623 PWY-5675 nitrate reduction V (assimilatory) Py04_0623 PWY-6549 L-glutamine biosynthesis III Py04_0623 PWY-6963 ammonia assimilation cycle I Py04_0623 PWY-6964 ammonia assimilation cycle II Py04_0626 PWY-7219 adenosine ribonucleotides de novo biosynthesis Py04_0628 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation Py04_0628 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Py04_0658 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Py04_0658 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Py04_0658 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Py04_0683 PWY-6829 tRNA methylation (yeast) Py04_0683 PWY-7285 methylwyosine biosynthesis Py04_0683 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Py04_0684 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Py04_0684 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Py04_0684 PWY-7185 UTP and CTP dephosphorylation I Py04_0684 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Py04_0684 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Py04_0710 PWY-5392 reductive TCA cycle II Py04_0710 PWY-5537 pyruvate fermentation to acetate V Py04_0710 PWY-5538 pyruvate fermentation to acetate VI Py04_0710 PWY-5690 TCA cycle II (plants and fungi) Py04_0710 PWY-5913 TCA cycle VI (obligate autotrophs) Py04_0710 PWY-6728 methylaspartate cycle Py04_0710 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Py04_0710 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Py04_0716 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Py04_0734 PWY-5686 UMP biosynthesis Py04_0737 PWY-6784 cellulose and hemicellulose degradation (cellulolosome) Py04_0738 PWY-4981 L-proline biosynthesis II (from arginine) Py04_0738 PWY-4984 urea cycle Py04_0738 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Py04_0739 PWY-6482 diphthamide biosynthesis (archaea) Py04_0743 PWY-5686 UMP biosynthesis Py04_0745 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Py04_0745 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Py04_0745 PWY-6897 thiamin salvage II Py04_0745 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Py04_0745 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Py04_0745 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) Py04_0745 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Py04_0749 PWY-6829 tRNA methylation (yeast) Py04_0749 PWY-7285 methylwyosine biosynthesis Py04_0749 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Py04_0757 PWY-6339 syringate degradation Py04_0759 PWY-6339 syringate degradation Py04_0760 PWY-4381 fatty acid biosynthesis initiation I Py04_0760 PWY-5743 3-hydroxypropanoate cycle Py04_0760 PWY-5744 glyoxylate assimilation Py04_0760 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Py04_0760 PWY-6679 jadomycin biosynthesis Py04_0760 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Py04_0766 PWY-6123 inosine-5'-phosphate biosynthesis I Py04_0766 PWY-6124 inosine-5'-phosphate biosynthesis II Py04_0766 PWY-7219 adenosine ribonucleotides de novo biosynthesis Py04_0766 PWY-7234 inosine-5'-phosphate biosynthesis III Py04_0774 PWY-5392 reductive TCA cycle II Py04_0774 PWY-5537 pyruvate fermentation to acetate V Py04_0774 PWY-5538 pyruvate fermentation to acetate VI Py04_0774 PWY-5690 TCA cycle II (plants and fungi) Py04_0774 PWY-5913 TCA cycle VI (obligate autotrophs) Py04_0774 PWY-6728 methylaspartate cycle Py04_0774 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Py04_0774 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Py04_0777 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Py04_0785 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Py04_0785 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Py04_0785 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Py04_0837 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Py04_0837 PWY-6148 tetrahydromethanopterin biosynthesis Py04_0837 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Py04_0837 PWY-6898 thiamin salvage III Py04_0837 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Py04_0837 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Py04_0837 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Py04_0843 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Py04_0843 PWY-7176 UTP and CTP de novo biosynthesis Py04_0843 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Py04_0843 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Py04_0843 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Py04_0843 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Py04_0843 PWY-7205 CMP phosphorylation Py04_0843 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Py04_0843 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Py04_0843 PWY-7221 guanosine ribonucleotides de novo biosynthesis Py04_0843 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Py04_0843 PWY-7224 purine deoxyribonucleosides salvage Py04_0843 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Py04_0843 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Py04_0847 PWY-5101 L-isoleucine biosynthesis II Py04_0847 PWY-5103 L-isoleucine biosynthesis III Py04_0847 PWY-5104 L-isoleucine biosynthesis IV Py04_0847 PWY-5938 (R)-acetoin biosynthesis I Py04_0847 PWY-5939 (R)-acetoin biosynthesis II Py04_0847 PWY-6389 (S)-acetoin biosynthesis Py04_0847 PWY-7111 pyruvate fermentation to isobutanol (engineered) Py04_0848 PWY-5101 L-isoleucine biosynthesis II Py04_0848 PWY-5103 L-isoleucine biosynthesis III Py04_0848 PWY-5104 L-isoleucine biosynthesis IV Py04_0848 PWY-7111 pyruvate fermentation to isobutanol (engineered) Py04_0849 PWY-6871 3-methylbutanol biosynthesis Py04_0853 PWY-5101 L-isoleucine biosynthesis II Py04_0853 PWY-6871 3-methylbutanol biosynthesis Py04_0854 PWY-5101 L-isoleucine biosynthesis II Py04_0854 PWY-5103 L-isoleucine biosynthesis III Py04_0854 PWY-5104 L-isoleucine biosynthesis IV Py04_0854 PWY-7111 pyruvate fermentation to isobutanol (engineered) Py04_0855 PWY-5656 mannosylglycerate biosynthesis I Py04_0856 PWY-5656 mannosylglycerate biosynthesis I Py04_0857 PWY-5659 GDP-mannose biosynthesis Py04_0857 PWY-6073 alginate biosynthesis I (algal) Py04_0857 PWY-6082 alginate biosynthesis II (bacterial) Py04_0857 PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) Py04_0858 PWY-6749 CMP-legionaminate biosynthesis I Py04_0875 PWY-7533 gliotoxin biosynthesis Py04_0896 PWY-5041 S-adenosyl-L-methionine cycle II Py04_0896 PWY-6151 S-adenosyl-L-methionine cycle I Py04_0896 PWY-6936 seleno-amino acid biosynthesis Py04_0896 PWY-702 L-methionine biosynthesis II Py04_0897 PWY-5041 S-adenosyl-L-methionine cycle II Py04_0897 PWY-6151 S-adenosyl-L-methionine cycle I Py04_0897 PWY-6936 seleno-amino acid biosynthesis Py04_0897 PWY-702 L-methionine biosynthesis II Py04_0898 PWY-2201 folate transformations I Py04_0898 PWY-3841 folate transformations II Py04_0935 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Py04_0935 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Py04_0935 PWY-6897 thiamin salvage II Py04_0935 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Py04_0935 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Py04_0935 PWY-6910 hydroxymethylpyrimidine salvage Py04_0935 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) Py04_0935 PWY-7356 thiamin salvage IV (yeast) Py04_0935 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Py04_0936 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Py04_0936 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Py04_0936 PWY-6897 thiamin salvage II Py04_0936 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Py04_0936 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Py04_0936 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) Py04_0936 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Py04_0937 PWY-6897 thiamin salvage II Py04_0937 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) Py04_0937 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Py04_0940 PWY-6899 base-degraded thiamin salvage Py04_0940 PWY-7356 thiamin salvage IV (yeast) Py04_0947 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Py04_0947 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Py04_0951 PWY-5686 UMP biosynthesis Py04_0956 PWY-6349 CDP-archaeol biosynthesis Py04_0962 PWY-6654 phosphopantothenate biosynthesis III Py04_0969 PWY-6148 tetrahydromethanopterin biosynthesis Py04_0976 PWY-5964 guanylyl molybdenum cofactor biosynthesis Py04_0990 PWY-101 photosynthesis light reactions Py04_0990 PWY-7230 ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic) Py04_1004 PWY-2941 L-lysine biosynthesis II Py04_1004 PWY-2942 L-lysine biosynthesis III Py04_1004 PWY-5097 L-lysine biosynthesis VI Py04_1004 PWY-6559 spermidine biosynthesis II Py04_1004 PWY-6562 norspermidine biosynthesis Py04_1004 PWY-7153 grixazone biosynthesis Py04_1005 PWY-2941 L-lysine biosynthesis II Py04_1005 PWY-2942 L-lysine biosynthesis III Py04_1005 PWY-5097 L-lysine biosynthesis VI Py04_1005 PWY-6559 spermidine biosynthesis II Py04_1005 PWY-6562 norspermidine biosynthesis Py04_1005 PWY-7153 grixazone biosynthesis Py04_1006 PWY-702 L-methionine biosynthesis II Py04_1008 PWY-2941 L-lysine biosynthesis II Py04_1008 PWY-2942 L-lysine biosynthesis III Py04_1008 PWY-5097 L-lysine biosynthesis VI Py04_1008 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Py04_1008 PWY-6559 spermidine biosynthesis II Py04_1008 PWY-6562 norspermidine biosynthesis Py04_1008 PWY-7153 grixazone biosynthesis Py04_1008 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Py04_1009 PWY-1042 glycolysis IV (plant cytosol) Py04_1009 PWY-5484 glycolysis II (from fructose 6-phosphate) Py04_1009 PWY-6886 1-butanol autotrophic biosynthesis Py04_1009 PWY-6901 superpathway of glucose and xylose degradation Py04_1009 PWY-7003 glycerol degradation to butanol Py04_1021 PWY-6482 diphthamide biosynthesis (archaea) Py04_1021 PWY-7546 diphthamide biosynthesis (eukaryotes) Py04_1023 PWY-5663 tetrahydrobiopterin biosynthesis I Py04_1023 PWY-5664 tetrahydrobiopterin biosynthesis II Py04_1023 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Py04_1023 PWY-6703 preQ0 biosynthesis Py04_1023 PWY-6983 tetrahydrobiopterin biosynthesis III Py04_1023 PWY-7442 drosopterin and aurodrosopterin biosynthesis Py04_1042 PWY-6823 molybdenum cofactor biosynthesis Py04_1053 PWY-6749 CMP-legionaminate biosynthesis I Py04_1060 PWY-5123 trans, trans-farnesyl diphosphate biosynthesis Py04_1060 PWY-6174 mevalonate pathway II (archaea) Py04_1060 PWY-6383 mono-trans, poly-cis decaprenyl phosphate biosynthesis Py04_1060 PWY-6859 all-trans-farnesol biosynthesis Py04_1060 PWY-7102 bisabolene biosynthesis Py04_1060 PWY-7391 isoprene biosynthesis II (engineered) Py04_1060 PWY-7524 mevalonate pathway III (archaea) Py04_1060 PWY-7560 methylerythritol phosphate pathway II Py04_1060 PWY-922 mevalonate pathway I Py04_1083 PWY-4381 fatty acid biosynthesis initiation I Py04_1090 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Py04_1090 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Py04_1090 PWY-6268 adenosylcobalamin salvage from cobalamin Py04_1090 PWY-6269 adenosylcobalamin salvage from cobinamide II Py04_1091 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Py04_1091 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Py04_1099 PWY-6167 flavin biosynthesis II (archaea) Py04_1102 PWY-7378 aminopropanol phosphate biosynthesis II Py04_1119 PWY-6703 preQ0 biosynthesis Py04_1124 PWY-1042 glycolysis IV (plant cytosol) Py04_1124 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Py04_1124 PWY-5484 glycolysis II (from fructose 6-phosphate) Py04_1124 PWY-5723 Rubisco shunt Py04_1124 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Py04_1124 PWY-6886 1-butanol autotrophic biosynthesis Py04_1124 PWY-6901 superpathway of glucose and xylose degradation Py04_1124 PWY-7003 glycerol degradation to butanol Py04_1124 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Py04_1124 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Py04_1134 PWY-101 photosynthesis light reactions Py04_1134 PWY-7230 ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic) Py04_1143 PWY-6829 tRNA methylation (yeast) Py04_1143 PWY-7285 methylwyosine biosynthesis Py04_1143 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Py04_1152 PWY-3581 (S)-reticuline biosynthesis I Py04_1152 PWY-5254 methanofuran biosynthesis Py04_1152 PWY-5474 hydroxycinnamic acid tyramine amides biosynthesis Py04_1152 PWY-6133 (S)-reticuline biosynthesis II Py04_1152 PWY-6802 salidroside biosynthesis Py04_1152 PWY-7297 octopamine biosynthesis Py04_1155 PWY-5532 adenosine nucleotides degradation IV Py04_1155 PWY-5723 Rubisco shunt Py04_1169 PWY-7219 adenosine ribonucleotides de novo biosynthesis Py04_1170 PWY-6700 queuosine biosynthesis Py04_1170 PWY-6711 archaeosine biosynthesis Py04_1179 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation Py04_1179 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Py04_1186 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) Py04_1192 PWY-7205 CMP phosphorylation Py04_1196 PWY-6482 diphthamide biosynthesis (archaea) Py04_1196 PWY-7546 diphthamide biosynthesis (eukaryotes) Py04_1201 PWY-5839 menaquinol-7 biosynthesis Py04_1201 PWY-5844 menaquinol-9 biosynthesis Py04_1201 PWY-5849 menaquinol-6 biosynthesis Py04_1201 PWY-5890 menaquinol-10 biosynthesis Py04_1201 PWY-5891 menaquinol-11 biosynthesis Py04_1201 PWY-5892 menaquinol-12 biosynthesis Py04_1201 PWY-5895 menaquinol-13 biosynthesis Py04_1212 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Py04_1212 PWY-5723 Rubisco shunt Py04_1228 PWY-7183 pyrimidine nucleobases salvage I Py04_1232 PWY-6891 thiazole biosynthesis II (Bacillus) Py04_1232 PWY-6892 thiazole biosynthesis I (E. coli) Py04_1234 PWY-1881 formate oxidation to CO2 Py04_1234 PWY-5497 purine nucleobases degradation II (anaerobic) Py04_1234 PWY-6696 oxalate degradation III Py04_1238 PWY-7234 inosine-5'-phosphate biosynthesis III Py04_1239 PWY-7221 guanosine ribonucleotides de novo biosynthesis Py04_1240 PWY-7221 guanosine ribonucleotides de novo biosynthesis Py04_1276 PWY-5743 3-hydroxypropanoate cycle Py04_1276 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Py04_1276 PWY-6728 methylaspartate cycle Py04_1276 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Py04_1281 PWY-6832 2-aminoethylphosphonate degradation II Py04_1287 PWY-5941 glycogen degradation II (eukaryotic) Py04_1287 PWY-6724 starch degradation II Py04_1287 PWY-6737 starch degradation V Py04_1287 PWY-7238 sucrose biosynthesis II Py04_1294 PWY-6823 molybdenum cofactor biosynthesis Py04_1333 PWY-181 photorespiration Py04_1336 PWY-6829 tRNA methylation (yeast) Py04_1336 PWY-7285 methylwyosine biosynthesis Py04_1336 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Py04_1355 PWY-6654 phosphopantothenate biosynthesis III Py04_1358 PWY-5067 glycogen biosynthesis II (from UDP-D-Glucose) Py04_1358 PWY-622 starch biosynthesis Py04_1369 PWY-6349 CDP-archaeol biosynthesis Py04_1377 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Py04_1377 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Py04_1405 PWY-5941 glycogen degradation II (eukaryotic) Py04_1405 PWY-622 starch biosynthesis Py04_1405 PWY-6731 starch degradation III Py04_1405 PWY-6737 starch degradation V Py04_1405 PWY-7238 sucrose biosynthesis II Py04_1410 PWY-5392 reductive TCA cycle II Py04_1410 PWY-5537 pyruvate fermentation to acetate V Py04_1410 PWY-5538 pyruvate fermentation to acetate VI Py04_1410 PWY-5690 TCA cycle II (plants and fungi) Py04_1410 PWY-5913 TCA cycle VI (obligate autotrophs) Py04_1410 PWY-6728 methylaspartate cycle Py04_1410 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Py04_1410 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Py04_1476 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Py04_1485 PWY-5532 adenosine nucleotides degradation IV Py04_1492 PWY-2301 myo-inositol biosynthesis Py04_1492 PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) Py04_1492 PWY-6372 1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium) Py04_1492 PWY-6580 phosphatidylinositol biosynthesis I (bacteria) Py04_1492 PWY-6664 di-myo-inositol phosphate biosynthesis Py04_1495 PWY-6703 preQ0 biosynthesis Py04_1496 PWY-40 putrescine biosynthesis I Py04_1496 PWY-43 putrescine biosynthesis II Py04_1496 PWY-6305 putrescine biosynthesis IV Py04_1496 PWY-6834 spermidine biosynthesis III Py04_1510 PWY-7335 UDP-N-acetyl-α-D-mannosaminouronate biosynthesis Py04_1517 PWY-6174 mevalonate pathway II (archaea) Py04_1517 PWY-7524 mevalonate pathway III (archaea) Py04_1518 PWY-3821 galactose degradation III Py04_1518 PWY-6174 mevalonate pathway II (archaea) Py04_1518 PWY-6317 galactose degradation I (Leloir pathway) Py04_1518 PWY-6527 stachyose degradation Py04_1518 PWY-7391 isoprene biosynthesis II (engineered) Py04_1518 PWY-922 mevalonate pathway I Py04_1522 PWY-1042 glycolysis IV (plant cytosol) Py04_1522 PWY-1622 formaldehyde assimilation I (serine pathway) Py04_1522 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Py04_1522 PWY-5484 glycolysis II (from fructose 6-phosphate) Py04_1522 PWY-5723 Rubisco shunt Py04_1522 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Py04_1522 PWY-6886 1-butanol autotrophic biosynthesis Py04_1522 PWY-6901 superpathway of glucose and xylose degradation Py04_1522 PWY-7003 glycerol degradation to butanol Py04_1522 PWY-7124 ethylene biosynthesis V (engineered) Py04_1522 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Py04_1537 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Py04_1538 PWY-6823 molybdenum cofactor biosynthesis Py04_1543 PWY-1622 formaldehyde assimilation I (serine pathway) Py04_1543 PWY-181 photorespiration Py04_1543 PWY-2161 folate polyglutamylation Py04_1543 PWY-2201 folate transformations I Py04_1543 PWY-3661 glycine betaine degradation I Py04_1543 PWY-3661-1 glycine betaine degradation II (mammalian) Py04_1543 PWY-3841 folate transformations II Py04_1543 PWY-5497 purine nucleobases degradation II (anaerobic) Py04_1562 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Py04_1562 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Py04_1562 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Py04_1579 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Py04_1587 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Py04_1587 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Py04_1587 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Py04_1587 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Py04_1587 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Py04_1587 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Py04_1588 PWY-6749 CMP-legionaminate biosynthesis I Py04_1594 PWY-5796 malonate decarboxylase activation Py04_1597 PWY-7285 methylwyosine biosynthesis Py04_1597 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Py04_1600 PWY-3341 L-proline biosynthesis III Py04_1600 PWY-4981 L-proline biosynthesis II (from arginine) Py04_1600 PWY-6344 L-ornithine degradation II (Stickland reaction) Py04_1601 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Py04_1601 PWY-5686 UMP biosynthesis Py04_1601 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Py04_1602 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Py04_1602 PWY-5686 UMP biosynthesis Py04_1602 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Py04_1606 PWY-5958 acridone alkaloid biosynthesis Py04_1606 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Py04_1606 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Py04_1607 PWY-5958 acridone alkaloid biosynthesis Py04_1607 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Py04_1607 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Py04_1612 PWY-7303 3-dimethylallyl-4-hydroxybenzoate biosynthesis Py04_1615 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Py04_1616 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Py04_1624 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Py04_1625 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Py04_1626 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Py04_1626 PWY-6416 quinate degradation II Py04_1626 PWY-6707 gallate biosynthesis Py04_1627 PWY-6164 3-dehydroquinate biosynthesis I Py04_1628 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Py04_1628 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Py04_1628 PWY-6164 3-dehydroquinate biosynthesis I Py04_1630 PWY-6891 thiazole biosynthesis II (Bacillus) Py04_1630 PWY-6892 thiazole biosynthesis I (E. coli) Py04_1630 PWY-7560 methylerythritol phosphate pathway II Py04_1634 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Py04_1634 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Py04_1635 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Py04_1635 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Py04_1641 PWY-3081 L-lysine biosynthesis V Py04_1641 PWY-6871 3-methylbutanol biosynthesis Py04_1643 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Py04_1643 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Py04_1682 PWY-7219 adenosine ribonucleotides de novo biosynthesis Py04_1714 PWY-5663 tetrahydrobiopterin biosynthesis I Py04_1714 PWY-5664 tetrahydrobiopterin biosynthesis II Py04_1714 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Py04_1714 PWY-6703 preQ0 biosynthesis Py04_1714 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Py04_1714 PWY-6983 tetrahydrobiopterin biosynthesis III Py04_1714 PWY-7442 drosopterin and aurodrosopterin biosynthesis Py04_1720 PWY-5392 reductive TCA cycle II Py04_1720 PWY-5537 pyruvate fermentation to acetate V Py04_1720 PWY-5538 pyruvate fermentation to acetate VI Py04_1720 PWY-5690 TCA cycle II (plants and fungi) Py04_1720 PWY-5913 TCA cycle VI (obligate autotrophs) Py04_1720 PWY-6728 methylaspartate cycle Py04_1720 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Py04_1720 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Py04_1721 PWY-7176 UTP and CTP de novo biosynthesis Py04_1721 PWY-7177 UTP and CTP dephosphorylation II Py04_1721 PWY-7185 UTP and CTP dephosphorylation I Py04_1729 PWY-6174 mevalonate pathway II (archaea) Py04_1729 PWY-7391 isoprene biosynthesis II (engineered) Py04_1729 PWY-7524 mevalonate pathway III (archaea) Py04_1729 PWY-922 mevalonate pathway I Py04_1751 PWY-5041 S-adenosyl-L-methionine cycle II Py04_1751 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis Py04_1757 PWY-6654 phosphopantothenate biosynthesis III Py04_1759 PWY-6829 tRNA methylation (yeast) Py04_1764 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Py04_1764 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Py04_1764 PWY-6896 thiamin salvage I Py04_1764 PWY-6897 thiamin salvage II Py04_1786 PWY-6829 tRNA methylation (yeast)