Rpic12D_3470 PWY-5041 S-adenosyl-L-methionine cycle II Rpic12D_3470 PWY-6151 S-adenosyl-L-methionine cycle I Rpic12D_3470 PWY-6936 seleno-amino acid biosynthesis Rpic12D_3470 PWY-702 L-methionine biosynthesis II Rpic12D_3481 PWY-5747 2-methylcitrate cycle II Rpic12D_3541 PWY-5162 2-oxopentenoate degradation Rpic12D_3542 PWY-5162 2-oxopentenoate degradation Rpic12D_3542 PWY-5436 L-threonine degradation IV Rpic12D_3542 PWY-5480 pyruvate fermentation to ethanol I Rpic12D_3542 PWY-6587 pyruvate fermentation to ethanol III Rpic12D_3542 PWY-7085 triethylamine degradation Rpic12D_3542 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation Rpic12D_3543 PWY-5419 catechol degradation to 2-oxopent-4-enoate II Rpic12D_3543 PWY-5647 2-nitrobenzoate degradation I Rpic12D_3543 PWY-5654 2-amino-3-carboxymuconate semialdehyde degradation to 2-oxopentenoate Rpic12D_3543 PWY-6210 2-aminophenol degradation Rpic12D_3543 PWY-6214 3-chlorocatechol degradation III (meta pathway) Rpic12D_3543 PWY-6336 protocatechuate degradation III (para-cleavage pathway) Rpic12D_3543 PWY-7006 4-amino-3-hydroxybenzoate degradation Rpic12D_3543 PWY-7480 2,3-dihydroxybenzoate degradation Rpic12D_3548 PWY-5419 catechol degradation to 2-oxopent-4-enoate II Rpic12D_3548 PWY-5641 2-nitrotoluene degradation Rpic12D_3551 PWY-5418 phenol degradation I (aerobic) Rpic12D_3555 PWY-5418 phenol degradation I (aerobic) Rpic12D_3566 PWY-1881 formate oxidation to CO2 Rpic12D_3566 PWY-5497 purine nucleobases degradation II (anaerobic) Rpic12D_3566 PWY-6696 oxalate degradation III Rpic12D_3577 PWY-5381 pyridine nucleotide cycling (plants) Rpic12D_3580 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Rpic12D_3580 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Rpic12D_3580 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Rpic12D_3616 PWY-7335 UDP-N-acetyl-α-D-mannosaminouronate biosynthesis Rpic12D_3635 PWY-4381 fatty acid biosynthesis initiation I Rpic12D_3651 PWY-7219 adenosine ribonucleotides de novo biosynthesis Rpic12D_3657 PWY-5833 CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis Rpic12D_3657 PWY-5940 streptomycin biosynthesis Rpic12D_3658 PWY-5833 CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis Rpic12D_3688 PWY-5971 palmitate biosynthesis II (bacteria and plants) Rpic12D_3688 PWY-5973 cis-vaccenate biosynthesis Rpic12D_3688 PWY-5989 stearate biosynthesis II (bacteria and plants) Rpic12D_3688 PWY-5994 palmitate biosynthesis I (animals and fungi) Rpic12D_3688 PWY-6113 superpathway of mycolate biosynthesis Rpic12D_3688 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Rpic12D_3688 PWY-6519 8-amino-7-oxononanoate biosynthesis I Rpic12D_3688 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Rpic12D_3688 PWYG-321 mycolate biosynthesis Rpic12D_3696 PWY-5367 petroselinate biosynthesis Rpic12D_3696 PWY-5971 palmitate biosynthesis II (bacteria and plants) Rpic12D_3696 PWY-5973 cis-vaccenate biosynthesis Rpic12D_3696 PWY-5989 stearate biosynthesis II (bacteria and plants) Rpic12D_3696 PWY-5994 palmitate biosynthesis I (animals and fungi) Rpic12D_3696 PWY-6113 superpathway of mycolate biosynthesis Rpic12D_3696 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Rpic12D_3696 PWY-6519 8-amino-7-oxononanoate biosynthesis I Rpic12D_3696 PWY-6951 Rpic12D_3696 Rpic12D_3696 PWY-7053 docosahexaenoate biosynthesis I (lower eukaryotes) Rpic12D_3696 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Rpic12D_3696 PWYG-321 mycolate biosynthesis Rpic12D_3701 PWY-5839 menaquinol-7 biosynthesis Rpic12D_3701 PWY-5844 menaquinol-9 biosynthesis Rpic12D_3701 PWY-5849 menaquinol-6 biosynthesis Rpic12D_3701 PWY-5890 menaquinol-10 biosynthesis Rpic12D_3701 PWY-5891 menaquinol-11 biosynthesis Rpic12D_3701 PWY-5892 menaquinol-12 biosynthesis Rpic12D_3701 PWY-5895 menaquinol-13 biosynthesis Rpic12D_3724 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Rpic12D_3729 PWY-6871 3-methylbutanol biosynthesis Rpic12D_3740 PWY-723 alkylnitronates degradation Rpic12D_3745 PWY-723 alkylnitronates degradation Rpic12D_3761 PWY-5022 4-aminobutanoate degradation V Rpic12D_3761 PWY-6728 methylaspartate cycle Rpic12D_3761 PWY-7126 ethylene biosynthesis IV Rpic12D_3780 PWY-6654 phosphopantothenate biosynthesis III Rpic12D_3783 PWY-3461 L-tyrosine biosynthesis II Rpic12D_3783 PWY-3462 L-phenylalanine biosynthesis II Rpic12D_3783 PWY-6120 L-tyrosine biosynthesis III Rpic12D_3783 PWY-6627 salinosporamide A biosynthesis Rpic12D_3788 PWY-2723 trehalose degradation V Rpic12D_3788 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Rpic12D_3788 PWY-5661 GDP-glucose biosynthesis Rpic12D_3788 PWY-7238 sucrose biosynthesis II Rpic12D_3788 PWY-7385 1,3-propanediol biosynthesis (engineered) Rpic12D_3789 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Rpic12D_3789 PWY-6855 chitin degradation I (archaea) Rpic12D_3789 PWY-6906 chitin derivatives degradation Rpic12D_3790 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Rpic12D_3791 PWY-5101 L-isoleucine biosynthesis II Rpic12D_3791 PWY-5103 L-isoleucine biosynthesis III Rpic12D_3791 PWY-5104 L-isoleucine biosynthesis IV Rpic12D_3791 PWY-7111 pyruvate fermentation to isobutanol (engineered) Rpic12D_3796 PWY-3781 aerobic respiration I (cytochrome c) Rpic12D_3796 PWY-4521 arsenite oxidation I (respiratory) Rpic12D_3796 PWY-6692 Fe(II) oxidation Rpic12D_3796 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Rpic12D_3852 PWY-1361 benzoyl-CoA degradation I (aerobic) Rpic12D_3852 PWY-5109 2-methylbutanoate biosynthesis Rpic12D_3852 PWY-5136 fatty acid β-oxidation II (peroxisome) Rpic12D_3852 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Rpic12D_3852 PWY-5177 glutaryl-CoA degradation Rpic12D_3852 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Rpic12D_3852 PWY-6435 4-hydroxybenzoate biosynthesis V Rpic12D_3852 PWY-6583 pyruvate fermentation to butanol I Rpic12D_3852 PWY-6863 pyruvate fermentation to hexanol Rpic12D_3852 PWY-6883 pyruvate fermentation to butanol II Rpic12D_3852 PWY-6944 androstenedione degradation Rpic12D_3852 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Rpic12D_3852 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Rpic12D_3852 PWY-7007 methyl ketone biosynthesis Rpic12D_3852 PWY-7046 4-coumarate degradation (anaerobic) Rpic12D_3852 PWY-7094 fatty acid salvage Rpic12D_3852 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Rpic12D_3852 PWY-735 jasmonic acid biosynthesis Rpic12D_3852 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Rpic12D_3863 PWY-5794 malonate degradation I (biotin-independent) Rpic12D_3863 PWY-6060 malonate degradation II (biotin-dependent) Rpic12D_3864 PWY-5796 malonate decarboxylase activation Rpic12D_3866 PWY-4381 fatty acid biosynthesis initiation I Rpic12D_3866 PWY-5743 3-hydroxypropanoate cycle Rpic12D_3866 PWY-5744 glyoxylate assimilation Rpic12D_3866 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Rpic12D_3866 PWY-6060 malonate degradation II (biotin-dependent) Rpic12D_3866 PWY-6679 jadomycin biosynthesis Rpic12D_3866 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Rpic12D_3867 PWY-6060 malonate degradation II (biotin-dependent) Rpic12D_3870 PWY-5796 malonate decarboxylase activation Rpic12D_3899 PWY-3801 sucrose degradation II (sucrose synthase) Rpic12D_3899 PWY-6527 stachyose degradation Rpic12D_3899 PWY-6981 chitin biosynthesis Rpic12D_3899 PWY-7238 sucrose biosynthesis II Rpic12D_3899 PWY-7343 UDP-glucose biosynthesis Rpic12D_3975 PWY-5747 2-methylcitrate cycle II Rpic12D_3992 PWY-7310 D-glucosaminate degradation Rpic12D_4004 PWY-6151 S-adenosyl-L-methionine cycle I Rpic12D_4004 PWY-6153 autoinducer AI-2 biosynthesis I Rpic12D_4004 PWY-6154 autoinducer AI-2 biosynthesis II (Vibrio) Rpic12D_4036 PWY-6617 adenosine nucleotides degradation III Rpic12D_4046 PWY-2661 trehalose biosynthesis V Rpic12D_4047 PWY-5941 glycogen degradation II (eukaryotic) Rpic12D_4047 PWY-6724 starch degradation II Rpic12D_4047 PWY-6737 starch degradation V Rpic12D_4047 PWY-7238 sucrose biosynthesis II Rpic12D_4048 PWY-2661 trehalose biosynthesis V Rpic12D_4050 PWY-5067 glycogen biosynthesis II (from UDP-D-Glucose) Rpic12D_4050 PWY-622 starch biosynthesis Rpic12D_4051 PWY-2622 trehalose biosynthesis IV Rpic12D_4053 PWY-622 starch biosynthesis Rpic12D_4081 PWY-7052 cyanophycin metabolism Rpic12D_4082 PWY-7052 cyanophycin metabolism Rpic12D_4088 PWY-5642 2,4-dinitrotoluene degradation Rpic12D_4088 PWY-6373 acrylate degradation Rpic12D_4126 PWY-3781 aerobic respiration I (cytochrome c) Rpic12D_4126 PWY-4521 arsenite oxidation I (respiratory) Rpic12D_4126 PWY-6692 Fe(II) oxidation Rpic12D_4126 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Rpic12D_4128 PWY-6523 nitrite-dependent anaerobic methane oxidation Rpic12D_4128 PWY-6748 nitrate reduction VII (denitrification) Rpic12D_4128 PWY-7084 nitrifier denitrification Rpic12D_4134 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Rpic12D_4134 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Rpic12D_4136 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Rpic12D_4136 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Rpic12D_4171 PWY-6748 nitrate reduction VII (denitrification) Rpic12D_4171 PWY-7084 nitrifier denitrification Rpic12D_4184 PWY-2723 trehalose degradation V Rpic12D_4184 PWY-6317 galactose degradation I (Leloir pathway) Rpic12D_4184 PWY-6737 starch degradation V Rpic12D_4194 PWY-5101 L-isoleucine biosynthesis II Rpic12D_4194 PWY-5103 L-isoleucine biosynthesis III Rpic12D_4194 PWY-5104 L-isoleucine biosynthesis IV Rpic12D_4194 PWY-7111 pyruvate fermentation to isobutanol (engineered) Rpic12D_4211 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Rpic12D_4211 PWY-6416 quinate degradation II Rpic12D_4211 PWY-6707 gallate biosynthesis Rpic12D_4219 PWY-5057 L-valine degradation II Rpic12D_4219 PWY-5076 L-leucine degradation III Rpic12D_4219 PWY-5078 L-isoleucine degradation II Rpic12D_4219 PWY-5101 L-isoleucine biosynthesis II Rpic12D_4219 PWY-5103 L-isoleucine biosynthesis III Rpic12D_4219 PWY-5104 L-isoleucine biosynthesis IV Rpic12D_4219 PWY-5108 L-isoleucine biosynthesis V Rpic12D_4237 PWY-6834 spermidine biosynthesis III Rpic12D_4239 PWY-5392 reductive TCA cycle II Rpic12D_4239 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Rpic12D_4239 PWY-5690 TCA cycle II (plants and fungi) Rpic12D_4239 PWY-5913 TCA cycle VI (obligate autotrophs) Rpic12D_4239 PWY-6728 methylaspartate cycle Rpic12D_4239 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Rpic12D_4239 PWY-7254 TCA cycle VII (acetate-producers) Rpic12D_4239 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Rpic12D_4276 PWY-6683 sulfate reduction III (assimilatory) Rpic12D_4301 PWY-6167 flavin biosynthesis II (archaea) Rpic12D_4301 PWY-6168 flavin biosynthesis III (fungi) Rpic12D_4302 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Rpic12D_4302 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation Rpic12D_4302 PWY-7242 D-fructuronate degradation Rpic12D_4302 PWY-7310 D-glucosaminate degradation Rpic12D_4307 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Rpic12D_4345 PWY-3821 galactose degradation III Rpic12D_4345 PWY-6317 galactose degradation I (Leloir pathway) Rpic12D_4345 PWY-6397 mycolyl-arabinogalactan-peptidoglycan complex biosynthesis Rpic12D_4345 PWY-6527 stachyose degradation Rpic12D_4345 PWY-7328 superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis Rpic12D_4345 PWY-7344 UDP-D-galactose biosynthesis Rpic12D_4368 PWY-5451 acetone degradation I (to methylglyoxal) Rpic12D_4368 PWY-5665 vanillin biosynthesis I Rpic12D_4368 PWY-6398 melatonin degradation I Rpic12D_4368 PWY-6992 1,5-anhydrofructose degradation Rpic12D_4368 PWY-7466 acetone degradation III (to propane-1,2-diol) Rpic12D_4370 PWY-5530 sorbitol biosynthesis II Rpic12D_4381 PWY-5451 acetone degradation I (to methylglyoxal) Rpic12D_4381 PWY-6588 pyruvate fermentation to acetone Rpic12D_4381 PWY-6876 isopropanol biosynthesis Rpic12D_4381 PWY-7466 acetone degradation III (to propane-1,2-diol) Rpic12D_4384 PWY-5642 2,4-dinitrotoluene degradation Rpic12D_4384 PWY-6373 acrylate degradation Rpic12D_4409 PWY-4041 γ-glutamyl cycle Rpic12D_4409 PWY-5826 hypoglycin biosynthesis Rpic12D_4412 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Rpic12D_4426 PWY-1281 sulfoacetaldehyde degradation I Rpic12D_4426 PWY-5482 pyruvate fermentation to acetate II Rpic12D_4426 PWY-5485 pyruvate fermentation to acetate IV Rpic12D_4426 PWY-5497 purine nucleobases degradation II (anaerobic) Rpic12D_4426 PWY-6637 sulfolactate degradation II Rpic12D_4427 PWY-5482 pyruvate fermentation to acetate II Rpic12D_4427 PWY-5485 pyruvate fermentation to acetate IV Rpic12D_4427 PWY-5497 purine nucleobases degradation II (anaerobic) Rpic12D_4459 PWY-3722 glycine betaine biosynthesis II (Gram-positive bacteria) Rpic12D_4459 PWY-7494 choline degradation IV Rpic12D_4491 PWY-3781 aerobic respiration I (cytochrome c) Rpic12D_4491 PWY-4302 aerobic respiration III (alternative oxidase pathway) Rpic12D_4491 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Rpic12D_4491 PWY-5690 TCA cycle II (plants and fungi) Rpic12D_4491 PWY-6728 methylaspartate cycle Rpic12D_4491 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Rpic12D_4491 PWY-7254 TCA cycle VII (acetate-producers) Rpic12D_4491 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Rpic12D_4492 PWY-3781 aerobic respiration I (cytochrome c) Rpic12D_4492 PWY-4302 aerobic respiration III (alternative oxidase pathway) Rpic12D_4492 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Rpic12D_4492 PWY-5690 TCA cycle II (plants and fungi) Rpic12D_4492 PWY-6728 methylaspartate cycle Rpic12D_4492 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Rpic12D_4492 PWY-7254 TCA cycle VII (acetate-producers) Rpic12D_4492 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Rpic12D_4510 PWY-7181 pyrimidine deoxyribonucleosides degradation Rpic12D_4522 PWY-5484 glycolysis II (from fructose 6-phosphate) Rpic12D_4523 PWY-1881 formate oxidation to CO2 Rpic12D_4523 PWY-5497 purine nucleobases degradation II (anaerobic) Rpic12D_4523 PWY-6696 oxalate degradation III Rpic12D_4536 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Rpic12D_4536 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Rpic12D_4536 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Rpic12D_4536 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Rpic12D_4536 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Rpic12D_4536 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Rpic12D_4536 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Rpic12D_4536 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Rpic12D_4545 PWY-5676 acetyl-CoA fermentation to butanoate II Rpic12D_4545 PWY-5741 ethylmalonyl-CoA pathway Rpic12D_4545 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Rpic12D_4570 PWY-3162 L-tryptophan degradation V (side chain pathway) Rpic12D_4570 PWY-5057 L-valine degradation II Rpic12D_4570 PWY-5076 L-leucine degradation III Rpic12D_4570 PWY-5078 L-isoleucine degradation II Rpic12D_4570 PWY-5079 L-phenylalanine degradation III Rpic12D_4570 PWY-5082 L-methionine degradation III Rpic12D_4570 PWY-5480 pyruvate fermentation to ethanol I Rpic12D_4570 PWY-5486 pyruvate fermentation to ethanol II Rpic12D_4570 PWY-5751 phenylethanol biosynthesis Rpic12D_4570 PWY-6028 acetoin degradation Rpic12D_4570 PWY-6313 serotonin degradation Rpic12D_4570 PWY-6333 acetaldehyde biosynthesis I Rpic12D_4570 PWY-6342 noradrenaline and adrenaline degradation Rpic12D_4570 PWY-6587 pyruvate fermentation to ethanol III Rpic12D_4570 PWY-6802 salidroside biosynthesis Rpic12D_4570 PWY-6871 3-methylbutanol biosynthesis Rpic12D_4570 PWY-7013 L-1,2-propanediol degradation Rpic12D_4570 PWY-7111 pyruvate fermentation to isobutanol (engineered) Rpic12D_4570 PWY-7118 chitin degradation to ethanol Rpic12D_4570 PWY-7396 butanol and isobutanol biosynthesis (engineered) Rpic12D_4570 PWY-7557 dehydrodiconiferyl alcohol degradation Rpic12D_4582 PWY-6497 D-galactarate degradation II Rpic12D_4586 PWY-6497 D-galactarate degradation II Rpic12D_4586 PWY-6499 D-glucarate degradation II Rpic12D_4597 PWY-5331 taurine biosynthesis Rpic12D_4613 PWY-5747 2-methylcitrate cycle II