RHE_CH00002	SSF52972	ITPase-like
RHE_CH00003	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00003	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RHE_CH00004	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00005	SSF53098	Ribonuclease H-like
RHE_CH00006	SSF54611	SecB-like
RHE_CH00008	SSF54427	NTF2-like
RHE_CH00009	SSF50685	Barwin-like endoglucanases
RHE_CH00010	SSF160443	SMR domain-like
RHE_CH00011	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH00012	SSF54211	Ribosomal protein S5 domain 2-like
RHE_CH00012	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH00012	SSF56719	Type II DNA topoisomerase
RHE_CH00013	SSF55469	FMN-dependent nitroreductase-like
RHE_CH00016	SSF56529	FAH
RHE_CH00017	SSF53474	alpha/beta-Hydrolases
RHE_CH00020	SSF51366	Ribulose-phoshate binding barrel
RHE_CH00021	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RHE_CH00022	SSF51366	Ribulose-phoshate binding barrel
RHE_CH00023	SSF52096	ClpP/crotonase
RHE_CH00024	SSF53244	MurD-like peptide ligases, peptide-binding domain
RHE_CH00024	SSF53623	MurD-like peptide ligases, catalytic domain
RHE_CH00025	SSF52833	Thioredoxin-like
RHE_CH00026	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00026	SSF52980	Restriction endonuclease-like
RHE_CH00027	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00028	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH00029	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00029	SSF56112	Protein kinase-like (PK-like)
RHE_CH00030	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH00030	SSF55785	PYP-like sensor domain (PAS domain)
RHE_CH00030	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH00031	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00031	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RHE_CH00032	SSF55594	HPr-like
RHE_CH00033	SSF53062	PTS system fructose IIA component-like
RHE_CH00035	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH00035	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH00036	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_CH00036	SSF52172	CheY-like
RHE_CH00037	SSF53795	PEP carboxykinase-like
RHE_CH00037	SSF68923	PEP carboxykinase N-terminal domain
RHE_CH00038	SSF110916	Peptidyl-tRNA hydrolase domain-like
RHE_CH00039	SSF51197	Clavaminate synthase-like
RHE_CH00040	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00041	SSF101386	all-alpha NTP pyrophosphatases
RHE_CH00042	SSF51366	Ribulose-phoshate binding barrel
RHE_CH00043	SSF51366	Ribulose-phoshate binding barrel
RHE_CH00045	SSF52317	Class I glutamine amidotransferase-like
RHE_CH00047	SSF54211	Ribosomal protein S5 domain 2-like
RHE_CH00048	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RHE_CH00049	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00051	SSF48264	Cytochrome P450
RHE_CH00052	SSF51645	Malate synthase G
RHE_CH00053	SSF141523	L,D-transpeptidase catalytic domain-like
RHE_CH00055	SSF52172	CheY-like
RHE_CH00056	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH00056	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH00057	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00058	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00065	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00066	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_CH00068	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00069	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00070	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH00072	SSF51445	(Trans)glycosidases
RHE_CH00073	SSF53850	Periplasmic binding protein-like II
RHE_CH00074	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH00074	SSF53822	Periplasmic binding protein-like I
RHE_CH00076	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00076	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RHE_CH00077	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00077	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH00078	SSF51658	Xylose isomerase-like
RHE_CH00079	SSF51569	Aldolase
RHE_CH00080	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00080	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH00081	SSF46689	Homeodomain-like
RHE_CH00081	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_CH00082	SSF53850	Periplasmic binding protein-like II
RHE_CH00083	SSF161098	MetI-like
RHE_CH00084	SSF161098	MetI-like
RHE_CH00085	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00085	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH00086	SSF50331	MOP-like
RHE_CH00086	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00087	SSF56112	Protein kinase-like (PK-like)
RHE_CH00088	SSF101790	Aminomethyltransferase beta-barrel domain
RHE_CH00088	SSF103025	Folate-binding domain
RHE_CH00088	SSF51905	FAD/NAD(P)-binding domain
RHE_CH00088	SSF54373	FAD-linked reductases, C-terminal domain
RHE_CH00089	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RHE_CH00089	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00090	SSF51556	Metallo-dependent hydrolases
RHE_CH00092	SSF53720	ALDH-like
RHE_CH00093	SSF53383	PLP-dependent transferases
RHE_CH00094	SSF46955	Putative DNA-binding domain
RHE_CH00094	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH00094	SSF51182	RmlC-like cupins
RHE_CH00095	SSF53098	Ribonuclease H-like
RHE_CH00097	SSF50249	Nucleic acid-binding proteins
RHE_CH00098	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00106	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00107	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RHE_CH00108	SSF53901	Thiolase-like
RHE_CH00109	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00110	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH00111	SSF46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
RHE_CH00111	SSF50249	Nucleic acid-binding proteins
RHE_CH00111	SSF54211	Ribosomal protein S5 domain 2-like
RHE_CH00111	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
RHE_CH00111	SSF55666	Ribonuclease PH domain 2-like
RHE_CH00112	SSF47060	S15/NS1 RNA-binding domain
RHE_CH00113	SSF53474	alpha/beta-Hydrolases
RHE_CH00114	SSF55120	Pseudouridine synthase
RHE_CH00115	SSF89919	Ribosome-binding factor A, RbfA
RHE_CH00116	SSF50447	Translation proteins
RHE_CH00116	SSF52156	Initiation factor IF2/eIF5b, domain 3
RHE_CH00116	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00117	SSF55315	L30e-like
RHE_CH00117	SSF64376	YlxR-like
RHE_CH00118	SSF47794	Rad51 N-terminal domain-like
RHE_CH00118	SSF50249	Nucleic acid-binding proteins
RHE_CH00118	SSF54814	Prokaryotic type KH domain (KH-domain type II)
RHE_CH00118	SSF69705	Transcription factor NusA, N-terminal domain
RHE_CH00119	SSF74942	YhbC-like, C-terminal domain
RHE_CH00119	SSF75420	YhbC-like, N-terminal domain
RHE_CH00120	SSF103473	MFS general substrate transporter
RHE_CH00121	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH00122	SSF47090	PGBD-like
RHE_CH00122	SSF53955	Lysozyme-like
RHE_CH00123	SSF111304	Recombination protein RecR
RHE_CH00124	SSF50800	PK beta-barrel domain-like
RHE_CH00125	SSF82607	YbaB-like
RHE_CH00126	SSF48019	post-AAA+ oligomerization domain-like
RHE_CH00126	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00127	SSF54197	HIT-like
RHE_CH00128	SSF55811	Nudix
RHE_CH00129	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00130	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH00131	SSF53850	Periplasmic binding protein-like II
RHE_CH00131	SSF55021	ACT-like
RHE_CH00132	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH00133	SSF46626	Cytochrome c
RHE_CH00135	SSF53613	Ribokinase-like
RHE_CH00138	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00138	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RHE_CH00139	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH00140	SSF69572	Activating enzymes of the ubiquitin-like proteins
RHE_CH00141	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00142	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH00144	SSF46565	Chaperone J-domain
RHE_CH00144	SSF49493	HSP40/DnaJ peptide-binding domain
RHE_CH00144	SSF57938	DnaJ/Hsp40 cysteine-rich domain
RHE_CH00145	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
RHE_CH00145	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
RHE_CH00145	SSF53067	Actin-like ATPase domain
RHE_CH00146	SSF53955	Lysozyme-like
RHE_CH00146	SSF56601	beta-lactamase/transpeptidase-like
RHE_CH00148	SSF53187	Zn-dependent exopeptidases
RHE_CH00149	SSF141868	EAL domain-like
RHE_CH00149	SSF55073	Nucleotide cyclase
RHE_CH00149	SSF55785	PYP-like sensor domain (PAS domain)
RHE_CH00150	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00151	SSF47807	5' to 3' exonuclease, C-terminal subdomain
RHE_CH00151	SSF53098	Ribonuclease H-like
RHE_CH00151	SSF56672	DNA/RNA polymerases
RHE_CH00151	SSF88723	PIN domain-like
RHE_CH00152	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00152	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00153	SSF81301	Nucleotidyltransferase
RHE_CH00154	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00155	SSF51338	Composite domain of metallo-dependent hydrolases
RHE_CH00155	SSF51556	Metallo-dependent hydrolases
RHE_CH00157	SSF161098	MetI-like
RHE_CH00158	SSF161098	MetI-like
RHE_CH00159	SSF53850	Periplasmic binding protein-like II
RHE_CH00160	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00161	SSF51161	Trimeric LpxA-like enzymes
RHE_CH00162	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00163	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00166	SSF159709	PhnH-like
RHE_CH00168	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00168	SSF64288	Chorismate lyase-like
RHE_CH00169	SSF53254	Phosphoglycerate mutase-like
RHE_CH00170	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00170	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH00171	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00171	SSF90123	ABC transporter transmembrane region
RHE_CH00172	SSF53067	Actin-like ATPase domain
RHE_CH00173	SSF52335	Methylglyoxal synthase-like
RHE_CH00174	SSF55166	Hedgehog/DD-peptidase
RHE_CH00175	SSF53850	Periplasmic binding protein-like II
RHE_CH00176	SSF161098	MetI-like
RHE_CH00177	SSF161098	MetI-like
RHE_CH00178	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00179	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00179	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RHE_CH00181	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
RHE_CH00181	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
RHE_CH00184	SSF53474	alpha/beta-Hydrolases
RHE_CH00187	SSF53822	Periplasmic binding protein-like I
RHE_CH00188	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00191	SSF53927	Cytidine deaminase-like
RHE_CH00192	SSF53167	Purine and uridine phosphorylases
RHE_CH00193	SSF51569	Aldolase
RHE_CH00194	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
RHE_CH00194	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
RHE_CH00194	SSF54680	Pyrimidine nucleoside phosphorylase C-terminal domain
RHE_CH00195	SSF50630	Acid proteases
RHE_CH00196	SSF53271	PRTase-like
RHE_CH00197	SSF51556	Metallo-dependent hydrolases
RHE_CH00198	SSF143856	DeoB insert domain-like
RHE_CH00198	SSF53649	Alkaline phosphatase-like
RHE_CH00207	SSF52172	CheY-like
RHE_CH00207	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00208	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00212	SSF48452	TPR-like
RHE_CH00213	SSF52949	Macro domain-like
RHE_CH00213	SSF53187	Zn-dependent exopeptidases
RHE_CH00214	SSF46689	Homeodomain-like
RHE_CH00216	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00217	SSF54001	Cysteine proteinases
RHE_CH00218	SSF75304	Amidase signature (AS) enzymes
RHE_CH00219	SSF161098	MetI-like
RHE_CH00220	SSF161098	MetI-like
RHE_CH00221	SSF53850	Periplasmic binding protein-like II
RHE_CH00222	SSF56266	DmpA/ArgJ-like
RHE_CH00224	SSF53383	PLP-dependent transferases
RHE_CH00224	SSF56112	Protein kinase-like (PK-like)
RHE_CH00225	SSF53328	Formyltransferase
RHE_CH00225	SSF55021	ACT-like
RHE_CH00228	SSF51445	(Trans)glycosidases
RHE_CH00234	SSF110849	ParB/Sulfiredoxin
RHE_CH00235	SSF46689	Homeodomain-like
RHE_CH00235	SSF53041	Resolvase-like
RHE_CH00237	SSF48295	TrpR-like
RHE_CH00241	SSF56349	DNA breaking-rejoining enzymes
RHE_CH00244	SSF52833	Thioredoxin-like
RHE_CH00245	SSF52317	Class I glutamine amidotransferase-like
RHE_CH00246	SSF51161	Trimeric LpxA-like enzymes
RHE_CH00247	SSF51316	Mss4-like
RHE_CH00248	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00248	SSF54980	EF-G C-terminal domain-like
RHE_CH00249	SSF48613	Heme oxygenase-like
RHE_CH00250	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH00250	SSF51182	RmlC-like cupins
RHE_CH00251	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH00252	SSF56784	HAD-like
RHE_CH00253	SSF52768	Arginase/deacetylase
RHE_CH00255	SSF103481	Multidrug resistance efflux transporter EmrE
RHE_CH00256	SSF46458	Globin-like
RHE_CH00257	SSF47240	Ferritin-like
RHE_CH00259	SSF53474	alpha/beta-Hydrolases
RHE_CH00260	SSF54364	Translation initiation factor IF3, N-terminal domain
RHE_CH00260	SSF55200	Translation initiation factor IF3, C-terminal domain
RHE_CH00261	SSF143034	L35p-like
RHE_CH00262	SSF74731	Ribosomal protein L20
RHE_CH00263	SSF46589	tRNA-binding arm
RHE_CH00263	SSF55681	Class II aaRS and biotin synthetases
RHE_CH00264	SSF46955	Putative DNA-binding domain
RHE_CH00264	SSF50249	Nucleic acid-binding proteins
RHE_CH00264	SSF54991	Anticodon-binding domain of PheRS
RHE_CH00264	SSF55681	Class II aaRS and biotin synthetases
RHE_CH00264	SSF56037	PheT/TilS domain
RHE_CH00265	SSF54427	NTF2-like
RHE_CH00266	SSF51430	NAD(P)-linked oxidoreductase
RHE_CH00267	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00267	SSF53850	Periplasmic binding protein-like II
RHE_CH00268	SSF47240	Ferritin-like
RHE_CH00269	SSF55166	Hedgehog/DD-peptidase
RHE_CH00270	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH00271	SSF51430	NAD(P)-linked oxidoreductase
RHE_CH00272	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00272	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH00274	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH00277	SSF52218	Flavoproteins
RHE_CH00278	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00279	SSF103481	Multidrug resistance efflux transporter EmrE
RHE_CH00280	SSF144052	Thermophilic metalloprotease-like
RHE_CH00281	SSF47616	GST C-terminal domain-like
RHE_CH00281	SSF52833	Thioredoxin-like
RHE_CH00282	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00283	SSF55826	YbaK/ProRS associated domain
RHE_CH00284	SSF52833	Thioredoxin-like
RHE_CH00285	SSF53187	Zn-dependent exopeptidases
RHE_CH00286	SSF55144	LigT-like
RHE_CH00287	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
RHE_CH00287	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
RHE_CH00288	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00289	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00291	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00291	SSF53850	Periplasmic binding protein-like II
RHE_CH00292	SSF46689	Homeodomain-like
RHE_CH00293	SSF49777	PEBP-like
RHE_CH00294	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH00295	SSF53597	Dihydrofolate reductase-like
RHE_CH00297	SSF52317	Class I glutamine amidotransferase-like
RHE_CH00297	SSF52402	Adenine nucleotide alpha hydrolases-like
RHE_CH00297	SSF54810	GMP synthetase C-terminal dimerisation domain
RHE_CH00298	SSF53167	Purine and uridine phosphorylases
RHE_CH00299	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RHE_CH00300	SSF56112	Protein kinase-like (PK-like)
RHE_CH00301	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
RHE_CH00303	SSF46626	Cytochrome c
RHE_CH00305	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH00306	SSF50685	Barwin-like endoglucanases
RHE_CH00307	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00308	SSF46548	alpha-helical ferredoxin
RHE_CH00309	SSF47616	GST C-terminal domain-like
RHE_CH00309	SSF52833	Thioredoxin-like
RHE_CH00312	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00313	SSF54909	Dimeric alpha+beta barrel
RHE_CH00314	SSF51366	Ribulose-phoshate binding barrel
RHE_CH00315	SSF53254	Phosphoglycerate mutase-like
RHE_CH00316	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH00317	SSF117396	TM1631-like
RHE_CH00318	SSF55979	DNA clamp
RHE_CH00319	SSF53790	Tetrapyrrole methylase
RHE_CH00320	SSF52980	Restriction endonuclease-like
RHE_CH00321	SSF51182	RmlC-like cupins
RHE_CH00322	SSF52440	PreATP-grasp domain
RHE_CH00322	SSF56059	Glutathione synthetase ATP-binding domain-like
RHE_CH00323	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00323	SSF54211	Ribosomal protein S5 domain 2-like
RHE_CH00325	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RHE_CH00327	SSF103481	Multidrug resistance efflux transporter EmrE
RHE_CH00328	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00328	SSF54909	Dimeric alpha+beta barrel
RHE_CH00329	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH00330	SSF51283	dUTPase-like
RHE_CH00331	SSF50447	Translation proteins
RHE_CH00331	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00331	SSF54980	EF-G C-terminal domain-like
RHE_CH00335	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00335	SSF90123	ABC transporter transmembrane region
RHE_CH00337	SSF51316	Mss4-like
RHE_CH00338	SSF53474	alpha/beta-Hydrolases
RHE_CH00339	SSF103473	MFS general substrate transporter
RHE_CH00340	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00340	SSF48008	GntR ligand-binding domain-like
RHE_CH00341	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RHE_CH00342	SSF102645	CoaB-like
RHE_CH00342	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
RHE_CH00343	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00344	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00344	SSF53850	Periplasmic binding protein-like II
RHE_CH00345	SSF103473	MFS general substrate transporter
RHE_CH00346	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH00347	SSF111326	Urocanase
RHE_CH00348	SSF159894	YgaC/TfoX-N like
RHE_CH00349	SSF160991	CV3147-like
RHE_CH00350	SSF53187	Zn-dependent exopeptidases
RHE_CH00350	SSF55031	Bacterial exopeptidase dimerisation domain
RHE_CH00351	SSF51338	Composite domain of metallo-dependent hydrolases
RHE_CH00351	SSF51556	Metallo-dependent hydrolases
RHE_CH00352	SSF48557	L-aspartase-like
RHE_CH00353	SSF56112	Protein kinase-like (PK-like)
RHE_CH00354	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH00355	SSF46946	S13-like H2TH domain
RHE_CH00355	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RHE_CH00355	SSF81624	N-terminal domain of MutM-like DNA repair proteins
RHE_CH00356	SSF52096	ClpP/crotonase
RHE_CH00357	SSF46992	Ribosomal protein S20
RHE_CH00358	SSF48295	TrpR-like
RHE_CH00358	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00359	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00359	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH00360	SSF102114	Radical SAM enzymes
RHE_CH00361	SSF52972	ITPase-like
RHE_CH00362	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH00363	SSF54211	Ribosomal protein S5 domain 2-like
RHE_CH00363	SSF55666	Ribonuclease PH domain 2-like
RHE_CH00364	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00364	SSF55781	GAF domain-like
RHE_CH00365	SSF51064	Head domain of nucleotide exchange factor GrpE
RHE_CH00365	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
RHE_CH00366	SSF53590	Nucleoside hydrolase
RHE_CH00367	SSF49764	HSP20-like chaperones
RHE_CH00369	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH00370	SSF55973	S-adenosylmethionine synthetase
RHE_CH00371	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH00372	SSF56317	Carbon-nitrogen hydrolase
RHE_CH00373	SSF54631	CBS-domain pair
RHE_CH00373	SSF56176	FAD-binding/transporter-associated domain-like
RHE_CH00374	SSF55486	Metalloproteases ("zincins"), catalytic domain
RHE_CH00375	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00376	SSF102114	Radical SAM enzymes
RHE_CH00377	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
RHE_CH00378	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00379	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH00380	SSF53067	Actin-like ATPase domain
RHE_CH00381	SSF110836	Hypothetical protein SAV1430
RHE_CH00381	SSF117916	Fe-S cluster assembly (FSCA) domain-like
RHE_CH00382	SSF52402	Adenine nucleotide alpha hydrolases-like
RHE_CH00383	SSF52374	Nucleotidylyl transferase
RHE_CH00384	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH00385	SSF55166	Hedgehog/DD-peptidase
RHE_CH00387	SSF55021	ACT-like
RHE_CH00387	SSF81301	Nucleotidyltransferase
RHE_CH00387	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
RHE_CH00387	SSF81891	Poly A polymerase C-terminal region-like
RHE_CH00388	SSF48334	DNA repair protein MutS, domain III
RHE_CH00388	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00388	SSF53150	DNA repair protein MutS, domain II
RHE_CH00388	SSF55271	DNA repair protein MutS, domain I
RHE_CH00389	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00389	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RHE_CH00389	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RHE_CH00390	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH00391	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH00391	SSF52172	CheY-like
RHE_CH00391	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH00393	SSF55315	L30e-like
RHE_CH00393	SSF75217	alpha/beta knot
RHE_CH00394	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH00395	SSF55811	Nudix
RHE_CH00396	SSF55961	Bet v1-like
RHE_CH00397	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH00399	SSF47729	IHF-like DNA-binding proteins
RHE_CH00400	SSF52096	ClpP/crotonase
RHE_CH00403	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00405	SSF103481	Multidrug resistance efflux transporter EmrE
RHE_CH00406	SSF69754	Ribosome binding protein Y (YfiA homologue)
RHE_CH00407	SSF55804	Phoshotransferase/anion transport protein
RHE_CH00408	SSF158472	HAMP domain-like
RHE_CH00408	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RHE_CH00409	SSF53613	Ribokinase-like
RHE_CH00411	SSF46458	Globin-like
RHE_CH00411	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RHE_CH00412	SSF56420	Peptide deformylase
RHE_CH00413	SSF88723	PIN domain-like
RHE_CH00415	SSF55120	Pseudouridine synthase
RHE_CH00417	SSF53187	Zn-dependent exopeptidases
RHE_CH00417	SSF55031	Bacterial exopeptidase dimerisation domain
RHE_CH00418	SSF51161	Trimeric LpxA-like enzymes
RHE_CH00419	SSF102405	MCP/YpsA-like
RHE_CH00420	SSF47473	EF-hand
RHE_CH00421	SSF56784	HAD-like
RHE_CH00422	SSF102114	Radical SAM enzymes
RHE_CH00423	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
RHE_CH00423	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
RHE_CH00423	SSF57884	Ada DNA repair protein, N-terminal domain (N-Ada 10)
RHE_CH00424	SSF51621	Phosphoenolpyruvate/pyruvate domain
RHE_CH00425	SSF51395	FMN-linked oxidoreductases
RHE_CH00427	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00428	SSF53633	Carbamate kinase-like
RHE_CH00429	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RHE_CH00429	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RHE_CH00431	SSF82153	FAS1 domain
RHE_CH00432	SSF55785	PYP-like sensor domain (PAS domain)
RHE_CH00432	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH00435	SSF50249	Nucleic acid-binding proteins
RHE_CH00436	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00438	SSF54211	Ribosomal protein S5 domain 2-like
RHE_CH00440	SSF158472	HAMP domain-like
RHE_CH00440	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RHE_CH00441	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH00448	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH00449	SSF51430	NAD(P)-linked oxidoreductase
RHE_CH00450	SSF53474	alpha/beta-Hydrolases
RHE_CH00451	SSF51905	FAD/NAD(P)-binding domain
RHE_CH00451	SSF54373	FAD-linked reductases, C-terminal domain
RHE_CH00452	SSF54506	Diaminopimelate epimerase-like
RHE_CH00453	SSF159894	YgaC/TfoX-N like
RHE_CH00454	SSF54427	NTF2-like
RHE_CH00455	SSF46689	Homeodomain-like
RHE_CH00455	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_CH00456	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_CH00456	SSF48452	TPR-like
RHE_CH00457	SSF51182	RmlC-like cupins
RHE_CH00458	SSF55298	YjgF-like
RHE_CH00459	SSF141868	EAL domain-like
RHE_CH00459	SSF55073	Nucleotide cyclase
RHE_CH00460	SSF50129	GroES-like
RHE_CH00460	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00461	SSF46689	Homeodomain-like
RHE_CH00461	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_CH00462	SSF47240	Ferritin-like
RHE_CH00463	SSF102546	RbsD-like
RHE_CH00464	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00464	SSF53067	Actin-like ATPase domain
RHE_CH00465	SSF53822	Periplasmic binding protein-like I
RHE_CH00467	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00468	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00469	SSF51556	Metallo-dependent hydrolases
RHE_CH00470	SSF55073	Nucleotide cyclase
RHE_CH00471	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH00473	SSF46689	Homeodomain-like
RHE_CH00474	SSF53271	PRTase-like
RHE_CH00475	SSF53613	Ribokinase-like
RHE_CH00476	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RHE_CH00477	SSF53697	SIS domain
RHE_CH00478	SSF56801	Acetyl-CoA synthetase-like
RHE_CH00479	SSF50346	PRC-barrel domain
RHE_CH00480	SSF49303	beta-Galactosidase/glucuronidase domain
RHE_CH00480	SSF49785	Galactose-binding domain-like
RHE_CH00480	SSF51445	(Trans)glycosidases
RHE_CH00481	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH00482	SSF161098	MetI-like
RHE_CH00483	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00484	SSF161098	MetI-like
RHE_CH00485	SSF53850	Periplasmic binding protein-like II
RHE_CH00487	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00487	SSF53850	Periplasmic binding protein-like II
RHE_CH00488	SSF110395	CutC-like
RHE_CH00489	SSF50129	GroES-like
RHE_CH00489	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00491	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00492	SSF53822	Periplasmic binding protein-like I
RHE_CH00493	SSF102546	RbsD-like
RHE_CH00494	SSF51430	NAD(P)-linked oxidoreductase
RHE_CH00496	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00496	SSF48008	GntR ligand-binding domain-like
RHE_CH00497	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00497	SSF90123	ABC transporter transmembrane region
RHE_CH00498	SSF103473	MFS general substrate transporter
RHE_CH00505	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
RHE_CH00507	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00508	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH00508	SSF55785	PYP-like sensor domain (PAS domain)
RHE_CH00508	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH00509	SSF53850	Periplasmic binding protein-like II
RHE_CH00510	SSF161098	MetI-like
RHE_CH00511	SSF161098	MetI-like
RHE_CH00512	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00513	SSF109755	PhoU-like
RHE_CH00514	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_CH00514	SSF52172	CheY-like
RHE_CH00516	SSF53383	PLP-dependent transferases
RHE_CH00517	SSF53671	Aspartate/ornithine carbamoyltransferase
RHE_CH00518	SSF118352	HSP33 redox switch-like
RHE_CH00518	SSF64397	Hsp33 domain
RHE_CH00519	SSF46689	Homeodomain-like
RHE_CH00521	SSF110069	ApaG-like
RHE_CH00522	SSF53383	PLP-dependent transferases
RHE_CH00524	SSF51283	dUTPase-like
RHE_CH00526	SSF46689	Homeodomain-like
RHE_CH00526	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_CH00527	SSF111369	HlyD-like secretion proteins
RHE_CH00528	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RHE_CH00528	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RHE_CH00528	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RHE_CH00529	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00531	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH00532	SSF158472	HAMP domain-like
RHE_CH00532	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RHE_CH00533	SSF53850	Periplasmic binding protein-like II
RHE_CH00534	SSF158682	TerB-like
RHE_CH00535	SSF50199	Staphylococcal nuclease
RHE_CH00536	SSF51306	LexA/Signal peptidase
RHE_CH00537	SSF52172	CheY-like
RHE_CH00539	SSF56399	ADP-ribosylation
RHE_CH00540	SSF51395	FMN-linked oxidoreductases
RHE_CH00542	SSF55797	PR-1-like
RHE_CH00544	SSF48452	TPR-like
RHE_CH00544	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH00546	SSF69118	AhpD-like
RHE_CH00547	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00549	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00550	SSF56300	Metallo-dependent phosphatases
RHE_CH00551	SSF53955	Lysozyme-like
RHE_CH00552	SSF53597	Dihydrofolate reductase-like
RHE_CH00555	SSF47090	PGBD-like
RHE_CH00555	SSF81901	HCP-like
RHE_CH00556	SSF48150	DNA-glycosylase
RHE_CH00557	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RHE_CH00557	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RHE_CH00558	SSF53901	Thiolase-like
RHE_CH00559	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RHE_CH00559	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00559	SSF52096	ClpP/crotonase
RHE_CH00560	SSF50249	Nucleic acid-binding proteins
RHE_CH00561	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00562	SSF51316	Mss4-like
RHE_CH00563	SSF54427	NTF2-like
RHE_CH00564	SSF103473	MFS general substrate transporter
RHE_CH00565	SSF46689	Homeodomain-like
RHE_CH00565	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_CH00566	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH00566	SSF52172	CheY-like
RHE_CH00566	SSF55785	PYP-like sensor domain (PAS domain)
RHE_CH00566	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH00567	SSF81330	Gated mechanosensitive channel
RHE_CH00568	SSF53383	PLP-dependent transferases
RHE_CH00569	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00570	SSF141868	EAL domain-like
RHE_CH00570	SSF55073	Nucleotide cyclase
RHE_CH00571	SSF52096	ClpP/crotonase
RHE_CH00572	SSF56281	Metallo-hydrolase/oxidoreductase
RHE_CH00573	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00579	SSF55205	EPT/RTPC-like
RHE_CH00581	SSF53720	ALDH-like
RHE_CH00583	SSF52788	Phosphotyrosine protein phosphatases I
RHE_CH00586	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RHE_CH00590	SSF101874	YceI-like
RHE_CH00591	SSF54001	Cysteine proteinases
RHE_CH00592	SSF51182	RmlC-like cupins
RHE_CH00593	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00593	SSF53850	Periplasmic binding protein-like II
RHE_CH00595	SSF51658	Xylose isomerase-like
RHE_CH00601	SSF46689	Homeodomain-like
RHE_CH00602	SSF55298	YjgF-like
RHE_CH00603	SSF51569	Aldolase
RHE_CH00604	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00605	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00606	SSF51569	Aldolase
RHE_CH00607	SSF161098	MetI-like
RHE_CH00608	SSF161098	MetI-like
RHE_CH00609	SSF53850	Periplasmic binding protein-like II
RHE_CH00610	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00610	SSF48008	GntR ligand-binding domain-like
RHE_CH00611	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH00611	SSF53822	Periplasmic binding protein-like I
RHE_CH00612	SSF53822	Periplasmic binding protein-like I
RHE_CH00613	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00615	SSF51126	Pectin lyase-like
RHE_CH00616	SSF100939	SPOC domain-like
RHE_CH00617	SSF50249	Nucleic acid-binding proteins
RHE_CH00617	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
RHE_CH00618	SSF100939	SPOC domain-like
RHE_CH00620	SSF82784	OsmC-like
RHE_CH00621	SSF51905	FAD/NAD(P)-binding domain
RHE_CH00622	SSF103481	Multidrug resistance efflux transporter EmrE
RHE_CH00623	SSF53474	alpha/beta-Hydrolases
RHE_CH00623	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH00624	SSF52172	CheY-like
RHE_CH00624	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH00625	SSF52172	CheY-like
RHE_CH00626	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH00626	SSF55785	PYP-like sensor domain (PAS domain)
RHE_CH00626	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH00627	SSF52172	CheY-like
RHE_CH00628	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_CH00629	SSF52172	CheY-like
RHE_CH00630	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH00630	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH00631	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RHE_CH00633	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00634	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH00636	SSF46458	Globin-like
RHE_CH00636	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RHE_CH00637	SSF52091	SpoIIaa-like
RHE_CH00638	SSF52172	CheY-like
RHE_CH00639	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RHE_CH00639	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH00639	SSF50341	CheW-like
RHE_CH00639	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH00640	SSF50341	CheW-like
RHE_CH00641	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
RHE_CH00641	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH00642	SSF52172	CheY-like
RHE_CH00642	SSF52738	Methylesterase CheB, C-terminal domain
RHE_CH00643	SSF52172	CheY-like
RHE_CH00644	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
RHE_CH00647	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_CH00648	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_CH00650	SSF160544	EscU C-terminal domain-like
RHE_CH00651	SSF48029	FliG
RHE_CH00652	SSF101801	Surface presentation of antigens (SPOA)
RHE_CH00653	SSF101801	Surface presentation of antigens (SPOA)
RHE_CH00655	SSF117143	Flagellar hook protein flgE
RHE_CH00656	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00661	SSF117143	Flagellar hook protein flgE
RHE_CH00664	SSF158791	MgtE N-terminal domain-like
RHE_CH00668	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RHE_CH00669	SSF64518	Phase 1 flagellin
RHE_CH00670	SSF64518	Phase 1 flagellin
RHE_CH00671	SSF64518	Phase 1 flagellin
RHE_CH00672	SSF64518	Phase 1 flagellin
RHE_CH00674	SSF103088	OmpA-like
RHE_CH00677	SSF53955	Lysozyme-like
RHE_CH00678	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_CH00678	SSF52172	CheY-like
RHE_CH00679	SSF117143	Flagellar hook protein flgE
RHE_CH00680	SSF64518	Phase 1 flagellin
RHE_CH00681	SSF64518	Phase 1 flagellin
RHE_CH00684	SSF117143	Flagellar hook protein flgE
RHE_CH00694	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00694	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RHE_CH00695	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH00695	SSF53822	Periplasmic binding protein-like I
RHE_CH00696	SSF53850	Periplasmic binding protein-like II
RHE_CH00697	SSF160964	MalF N-terminal region-like
RHE_CH00697	SSF161098	MetI-like
RHE_CH00698	SSF161098	MetI-like
RHE_CH00699	SSF51011	Glycosyl hydrolase domain
RHE_CH00699	SSF51445	(Trans)glycosidases
RHE_CH00700	SSF50331	MOP-like
RHE_CH00700	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00702	SSF143975	IlvD/EDD N-terminal domain-like
RHE_CH00702	SSF52016	LeuD/IlvD-like
RHE_CH00703	SSF100950	NagB/RpiA/CoA transferase-like
RHE_CH00704	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00704	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH00705	SSF51905	FAD/NAD(P)-binding domain
RHE_CH00706	SSF54368	Glutamine synthetase, N-terminal domain
RHE_CH00706	SSF55931	Glutamine synthetase/guanido kinase
RHE_CH00707	SSF160996	HI0933 insert domain-like
RHE_CH00707	SSF51905	FAD/NAD(P)-binding domain
RHE_CH00708	SSF158472	HAMP domain-like
RHE_CH00708	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RHE_CH00709	SSF103190	Sensory domain-like
RHE_CH00709	SSF158472	HAMP domain-like
RHE_CH00709	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RHE_CH00710	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00710	SSF53850	Periplasmic binding protein-like II
RHE_CH00712	SSF51621	Phosphoenolpyruvate/pyruvate domain
RHE_CH00713	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH00714	SSF53850	Periplasmic binding protein-like II
RHE_CH00715	SSF50331	MOP-like
RHE_CH00715	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00716	SSF161098	MetI-like
RHE_CH00717	SSF161098	MetI-like
RHE_CH00719	SSF56801	Acetyl-CoA synthetase-like
RHE_CH00720	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH00720	SSF55785	PYP-like sensor domain (PAS domain)
RHE_CH00720	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH00723	SSF55486	Metalloproteases ("zincins"), catalytic domain
RHE_CH00724	SSF51120	beta-Roll
RHE_CH00725	SSF81301	Nucleotidyltransferase
RHE_CH00725	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
RHE_CH00726	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00729	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00729	SSF53850	Periplasmic binding protein-like II
RHE_CH00731	SSF53720	ALDH-like
RHE_CH00732	SSF56219	DNase I-like
RHE_CH00733	SSF81901	HCP-like
RHE_CH00735	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00736	SSF53850	Periplasmic binding protein-like II
RHE_CH00737	SSF161098	MetI-like
RHE_CH00741	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00742	SSF51905	FAD/NAD(P)-binding domain
RHE_CH00742	SSF54373	FAD-linked reductases, C-terminal domain
RHE_CH00744	SSF53901	Thiolase-like
RHE_CH00745	SSF48452	TPR-like
RHE_CH00746	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RHE_CH00746	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RHE_CH00748	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RHE_CH00749	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH00750	SSF51161	Trimeric LpxA-like enzymes
RHE_CH00751	SSF51161	Trimeric LpxA-like enzymes
RHE_CH00752	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH00754	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00755	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH00755	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH00756	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RHE_CH00757	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RHE_CH00758	SSF52402	Adenine nucleotide alpha hydrolases-like
RHE_CH00758	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RHE_CH00759	SSF52266	SGNH hydrolase
RHE_CH00760	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00761	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH00762	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00763	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00764	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH00766	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH00767	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH00768	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH00769	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH00772	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH00775	SSF48295	TrpR-like
RHE_CH00780	SSF48295	TrpR-like
RHE_CH00784	SSF53041	Resolvase-like
RHE_CH00788	SSF53067	Actin-like ATPase domain
RHE_CH00789	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH00791	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH00792	SSF103473	MFS general substrate transporter
RHE_CH00793	SSF56281	Metallo-hydrolase/oxidoreductase
RHE_CH00794	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
RHE_CH00794	SSF54631	CBS-domain pair
RHE_CH00796	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00796	SSF53850	Periplasmic binding protein-like II
RHE_CH00797	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00798	SSF161084	MAPEG domain-like
RHE_CH00799	SSF46689	Homeodomain-like
RHE_CH00800	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00800	SSF53850	Periplasmic binding protein-like II
RHE_CH00803	SSF55931	Glutamine synthetase/guanido kinase
RHE_CH00804	SSF75217	alpha/beta knot
RHE_CH00804	SSF88697	PUA domain-like
RHE_CH00806	SSF55811	Nudix
RHE_CH00807	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00807	SSF53850	Periplasmic binding protein-like II
RHE_CH00808	SSF55103	FAD-linked oxidases, C-terminal domain
RHE_CH00808	SSF56176	FAD-binding/transporter-associated domain-like
RHE_CH00809	SSF55103	FAD-linked oxidases, C-terminal domain
RHE_CH00809	SSF56176	FAD-binding/transporter-associated domain-like
RHE_CH00810	SSF54862	4Fe-4S ferredoxins
RHE_CH00812	SSF56925	OMPA-like
RHE_CH00813	SSF141523	L,D-transpeptidase catalytic domain-like
RHE_CH00814	SSF141523	L,D-transpeptidase catalytic domain-like
RHE_CH00815	SSF48150	DNA-glycosylase
RHE_CH00817	SSF56784	HAD-like
RHE_CH00818	SSF51430	NAD(P)-linked oxidoreductase
RHE_CH00819	SSF56024	Phospholipase D/nuclease
RHE_CH00821	SSF52954	Class II aaRS ABD-related
RHE_CH00821	SSF55681	Class II aaRS and biotin synthetases
RHE_CH00822	SSF55681	Class II aaRS and biotin synthetases
RHE_CH00823	SSF53850	Periplasmic binding protein-like II
RHE_CH00825	SSF47616	GST C-terminal domain-like
RHE_CH00825	SSF52833	Thioredoxin-like
RHE_CH00828	SSF48592	GroEL equatorial domain-like
RHE_CH00828	SSF52029	GroEL apical domain-like
RHE_CH00828	SSF54849	GroEL-intermediate domain like
RHE_CH00829	SSF50129	GroES-like
RHE_CH00830	SSF56784	HAD-like
RHE_CH00831	SSF52374	Nucleotidylyl transferase
RHE_CH00831	SSF82114	Riboflavin kinase-like
RHE_CH00832	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RHE_CH00832	SSF50677	ValRS/IleRS/LeuRS editing domain
RHE_CH00832	SSF52374	Nucleotidylyl transferase
RHE_CH00834	SSF53927	Cytidine deaminase-like
RHE_CH00835	SSF55120	Pseudouridine synthase
RHE_CH00835	SSF55174	Alpha-L RNA-binding motif
RHE_CH00836	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH00837	SSF52151	FabD/lysophospholipase-like
RHE_CH00838	SSF88697	PUA domain-like
RHE_CH00839	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH00840	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00841	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
RHE_CH00842	SSF56655	Carbohydrate phosphatase
RHE_CH00844	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RHE_CH00845	SSF56784	HAD-like
RHE_CH00846	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00848	SSF118116	DNA mismatch repair protein MutL
RHE_CH00848	SSF54211	Ribosomal protein S5 domain 2-like
RHE_CH00848	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH00849	SSF52172	CheY-like
RHE_CH00849	SSF55785	PYP-like sensor domain (PAS domain)
RHE_CH00850	SSF141868	EAL domain-like
RHE_CH00850	SSF55073	Nucleotide cyclase
RHE_CH00851	SSF50346	PRC-barrel domain
RHE_CH00852	SSF63829	Calcium-dependent phosphotriesterase
RHE_CH00853	SSF51569	Aldolase
RHE_CH00854	SSF53067	Actin-like ATPase domain
RHE_CH00855	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00856	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00856	SSF55781	GAF domain-like
RHE_CH00857	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_CH00857	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
RHE_CH00859	SSF117916	Fe-S cluster assembly (FSCA) domain-like
RHE_CH00859	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00860	SSF143865	CorA soluble domain-like
RHE_CH00860	SSF144083	Magnesium transport protein CorA, transmembrane region
RHE_CH00864	SSF81336	F1F0 ATP synthase subunit A
RHE_CH00865	SSF81333	F1F0 ATP synthase subunit C
RHE_CH00868	SSF53098	Ribonuclease H-like
RHE_CH00869	SSF102114	Radical SAM enzymes
RHE_CH00870	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH00872	SSF53218	Molybdenum cofactor biosynthesis proteins
RHE_CH00873	SSF54211	Ribosomal protein S5 domain 2-like
RHE_CH00873	SSF55060	GHMP Kinase, C-terminal domain
RHE_CH00874	SSF48452	TPR-like
RHE_CH00875	SSF48576	Terpenoid synthases
RHE_CH00876	SSF54913	GlnB-like
RHE_CH00877	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH00879	SSF52096	ClpP/crotonase
RHE_CH00881	SSF55681	Class II aaRS and biotin synthetases
RHE_CH00882	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00883	SSF140478	LemA-like
RHE_CH00884	SSF55205	EPT/RTPC-like
RHE_CH00886	SSF51246	Rudiment single hybrid motif
RHE_CH00886	SSF52440	PreATP-grasp domain
RHE_CH00886	SSF56059	Glutathione synthetase ATP-binding domain-like
RHE_CH00888	SSF158472	HAMP domain-like
RHE_CH00888	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RHE_CH00890	SSF109604	HD-domain/PDEase-like
RHE_CH00891	SSF158832	Tex N-terminal region-like
RHE_CH00891	SSF47781	RuvA domain 2-like
RHE_CH00891	SSF50249	Nucleic acid-binding proteins
RHE_CH00891	SSF53098	Ribonuclease H-like
RHE_CH00892	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH00893	SSF53254	Phosphoglycerate mutase-like
RHE_CH00897	SSF158837	AGR C 984p-like
RHE_CH00898	SSF55103	FAD-linked oxidases, C-terminal domain
RHE_CH00898	SSF56176	FAD-binding/transporter-associated domain-like
RHE_CH00899	SSF55821	YrdC/RibB
RHE_CH00901	SSF50022	ISP domain
RHE_CH00901	SSF55961	Bet v1-like
RHE_CH00904	SSF143865	CorA soluble domain-like
RHE_CH00904	SSF144083	Magnesium transport protein CorA, transmembrane region
RHE_CH00905	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RHE_CH00905	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RHE_CH00906	SSF52096	ClpP/crotonase
RHE_CH00907	SSF56281	Metallo-hydrolase/oxidoreductase
RHE_CH00908	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00909	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00910	SSF50249	Nucleic acid-binding proteins
RHE_CH00910	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH00911	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH00911	SSF55174	Alpha-L RNA-binding motif
RHE_CH00912	SSF158472	HAMP domain-like
RHE_CH00912	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RHE_CH00913	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RHE_CH00913	SSF52922	TK C-terminal domain-like
RHE_CH00914	SSF51182	RmlC-like cupins
RHE_CH00916	SSF116842	XseB-like
RHE_CH00917	SSF52768	Arginase/deacetylase
RHE_CH00918	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RHE_CH00919	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00919	SSF48008	GntR ligand-binding domain-like
RHE_CH00921	SSF56801	Acetyl-CoA synthetase-like
RHE_CH00923	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_CH00924	SSF51182	RmlC-like cupins
RHE_CH00925	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00925	SSF53850	Periplasmic binding protein-like II
RHE_CH00930	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00932	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00933	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00933	SSF53850	Periplasmic binding protein-like II
RHE_CH00935	SSF103263	Chorismate synthase, AroC
RHE_CH00937	SSF53254	Phosphoglycerate mutase-like
RHE_CH00938	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH00939	SSF46565	Chaperone J-domain
RHE_CH00939	SSF49493	HSP40/DnaJ peptide-binding domain
RHE_CH00941	SSF50475	FMN-binding split barrel
RHE_CH00942	SSF88713	Glycoside hydrolase/deacetylase
RHE_CH00944	SSF110997	Sporulation related repeat
RHE_CH00944	SSF56601	beta-lactamase/transpeptidase-like
RHE_CH00945	SSF101386	all-alpha NTP pyrophosphatases
RHE_CH00948	SSF55811	Nudix
RHE_CH00949	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH00950	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
RHE_CH00952	SSF49503	Cupredoxins
RHE_CH00952	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
RHE_CH00953	SSF81442	Cytochrome c oxidase subunit I-like
RHE_CH00955	SSF110111	Ctag/Cox11
RHE_CH00956	SSF81452	Cytochrome c oxidase subunit III-like
RHE_CH00957	SSF54197	HIT-like
RHE_CH00958	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00962	SSF56112	Protein kinase-like (PK-like)
RHE_CH00963	SSF53098	Ribonuclease H-like
RHE_CH00965	SSF69047	Hypothetical protein YjbJ
RHE_CH00966	SSF143456	VC0467-like
RHE_CH00968	SSF52833	Thioredoxin-like
RHE_CH00969	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH00970	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RHE_CH00971	SSF53807	"Helical backbone" metal receptor
RHE_CH00972	SSF53850	Periplasmic binding protein-like II
RHE_CH00973	SSF54909	Dimeric alpha+beta barrel
RHE_CH00974	SSF158472	HAMP domain-like
RHE_CH00974	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RHE_CH00976	SSF141868	EAL domain-like
RHE_CH00976	SSF55073	Nucleotide cyclase
RHE_CH00976	SSF55785	PYP-like sensor domain (PAS domain)
RHE_CH00977	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH00978	SSF63411	LuxS/MPP-like metallohydrolase
RHE_CH00979	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RHE_CH00981	SSF46626	Cytochrome c
RHE_CH00982	SSF81442	Cytochrome c oxidase subunit I-like
RHE_CH00983	SSF49503	Cupredoxins
RHE_CH00984	SSF46626	Cytochrome c
RHE_CH00985	SSF46626	Cytochrome c
RHE_CH00986	SSF56784	HAD-like
RHE_CH00987	SSF103473	MFS general substrate transporter
RHE_CH00988	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00988	SSF53850	Periplasmic binding protein-like II
RHE_CH00992	SSF46785	"Winged helix" DNA-binding domain
RHE_CH00993	SSF54909	Dimeric alpha+beta barrel
RHE_CH00994	SSF54909	Dimeric alpha+beta barrel
RHE_CH00995	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH00996	SSF56784	HAD-like
RHE_CH00997	SSF48150	DNA-glycosylase
RHE_CH00997	SSF55811	Nudix
RHE_CH00999	SSF52833	Thioredoxin-like
RHE_CH01000	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01000	SSF75553	Smc hinge domain
RHE_CH01001	SSF47616	GST C-terminal domain-like
RHE_CH01001	SSF52833	Thioredoxin-like
RHE_CH01003	SSF51621	Phosphoenolpyruvate/pyruvate domain
RHE_CH01003	SSF52009	Phosphohistidine domain
RHE_CH01003	SSF56059	Glutathione synthetase ATP-binding domain-like
RHE_CH01008	SSF52833	Thioredoxin-like
RHE_CH01009	SSF53474	alpha/beta-Hydrolases
RHE_CH01010	SSF55811	Nudix
RHE_CH01011	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01013	SSF56281	Metallo-hydrolase/oxidoreductase
RHE_CH01016	SSF88723	PIN domain-like
RHE_CH01018	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01019	SSF46689	Homeodomain-like
RHE_CH01019	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_CH01022	SSF103473	MFS general substrate transporter
RHE_CH01022	SSF56801	Acetyl-CoA synthetase-like
RHE_CH01022	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
RHE_CH01023	SSF103473	MFS general substrate transporter
RHE_CH01024	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01024	SSF53383	PLP-dependent transferases
RHE_CH01027	SSF46626	Cytochrome c
RHE_CH01028	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01029	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01033	SSF51306	LexA/Signal peptidase
RHE_CH01037	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_CH01040	SSF51316	Mss4-like
RHE_CH01042	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH01042	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH01043	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_CH01043	SSF52172	CheY-like
RHE_CH01046	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01047	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01048	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01049	SSF48452	TPR-like
RHE_CH01049	SSF55073	Nucleotide cyclase
RHE_CH01051	SSF54909	Dimeric alpha+beta barrel
RHE_CH01057	SSF50249	Nucleic acid-binding proteins
RHE_CH01061	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01061	SSF53850	Periplasmic binding protein-like II
RHE_CH01062	SSF56281	Metallo-hydrolase/oxidoreductase
RHE_CH01063	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH01064	SSF53056	beta-carbonic anhydrase, cab
RHE_CH01066	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01066	SSF54211	Ribosomal protein S5 domain 2-like
RHE_CH01066	SSF54980	EF-G C-terminal domain-like
RHE_CH01068	SSF141072	CalX-like
RHE_CH01068	SSF50952	Soluble quinoprotein glucose dehydrogenase
RHE_CH01071	SSF51182	RmlC-like cupins
RHE_CH01072	SSF54909	Dimeric alpha+beta barrel
RHE_CH01073	SSF53474	alpha/beta-Hydrolases
RHE_CH01074	SSF47616	GST C-terminal domain-like
RHE_CH01074	SSF52833	Thioredoxin-like
RHE_CH01075	SSF55961	Bet v1-like
RHE_CH01076	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01077	SSF51316	Mss4-like
RHE_CH01078	SSF55961	Bet v1-like
RHE_CH01079	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01081	SSF50939	Sialidases
RHE_CH01085	SSF53474	alpha/beta-Hydrolases
RHE_CH01086	SSF110710	TTHA0583/YokD-like
RHE_CH01088	SSF140804	YidB-like
RHE_CH01089	SSF53474	alpha/beta-Hydrolases
RHE_CH01102	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH01105	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH01108	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH01113	SSF53955	Lysozyme-like
RHE_CH01118	SSF54427	NTF2-like
RHE_CH01118	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RHE_CH01118	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RHE_CH01119	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01120	SSF50156	PDZ domain-like
RHE_CH01120	SSF50494	Trypsin-like serine proteases
RHE_CH01121	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH01121	SSF53822	Periplasmic binding protein-like I
RHE_CH01122	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01122	SSF53850	Periplasmic binding protein-like II
RHE_CH01123	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01124	SSF50129	GroES-like
RHE_CH01124	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01125	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01125	SSF53850	Periplasmic binding protein-like II
RHE_CH01126	SSF53955	Lysozyme-like
RHE_CH01126	SSF56601	beta-lactamase/transpeptidase-like
RHE_CH01127	SSF52833	Thioredoxin-like
RHE_CH01130	SSF50447	Translation proteins
RHE_CH01130	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
RHE_CH01130	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01131	SSF52402	Adenine nucleotide alpha hydrolases-like
RHE_CH01132	SSF52402	Adenine nucleotide alpha hydrolases-like
RHE_CH01133	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01136	SSF51905	FAD/NAD(P)-binding domain
RHE_CH01136	SSF54373	FAD-linked reductases, C-terminal domain
RHE_CH01137	SSF53720	ALDH-like
RHE_CH01138	SSF46689	Homeodomain-like
RHE_CH01138	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_CH01141	SSF50129	GroES-like
RHE_CH01141	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01142	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH01143	SSF103473	MFS general substrate transporter
RHE_CH01145	SSF100950	NagB/RpiA/CoA transferase-like
RHE_CH01145	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01147	SSF47616	GST C-terminal domain-like
RHE_CH01147	SSF52833	Thioredoxin-like
RHE_CH01150	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01154	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01154	SSF53850	Periplasmic binding protein-like II
RHE_CH01157	SSF49777	PEBP-like
RHE_CH01158	SSF51126	Pectin lyase-like
RHE_CH01159	SSF141868	EAL domain-like
RHE_CH01159	SSF55073	Nucleotide cyclase
RHE_CH01159	SSF55781	GAF domain-like
RHE_CH01159	SSF55785	PYP-like sensor domain (PAS domain)
RHE_CH01160	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_CH01160	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
RHE_CH01161	SSF55785	PYP-like sensor domain (PAS domain)
RHE_CH01161	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RHE_CH01162	SSF53474	alpha/beta-Hydrolases
RHE_CH01163	SSF56281	Metallo-hydrolase/oxidoreductase
RHE_CH01164	SSF50249	Nucleic acid-binding proteins
RHE_CH01164	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
RHE_CH01165	SSF53474	alpha/beta-Hydrolases
RHE_CH01167	SSF141523	L,D-transpeptidase catalytic domain-like
RHE_CH01168	SSF141523	L,D-transpeptidase catalytic domain-like
RHE_CH01169	SSF50249	Nucleic acid-binding proteins
RHE_CH01173	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01174	SSF82784	OsmC-like
RHE_CH01175	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01176	SSF52833	Thioredoxin-like
RHE_CH01178	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH01179	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01181	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01183	SSF55811	Nudix
RHE_CH01185	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01185	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH01186	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH01187	SSF54631	CBS-domain pair
RHE_CH01187	SSF56176	FAD-binding/transporter-associated domain-like
RHE_CH01188	SSF51182	RmlC-like cupins
RHE_CH01189	SSF50129	GroES-like
RHE_CH01189	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01190	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
RHE_CH01191	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01191	SSF53850	Periplasmic binding protein-like II
RHE_CH01192	SSF111369	HlyD-like secretion proteins
RHE_CH01193	SSF103473	MFS general substrate transporter
RHE_CH01194	SSF55073	Nucleotide cyclase
RHE_CH01194	SSF55781	GAF domain-like
RHE_CH01195	SSF52402	Adenine nucleotide alpha hydrolases-like
RHE_CH01196	SSF47616	GST C-terminal domain-like
RHE_CH01196	SSF52833	Thioredoxin-like
RHE_CH01197	SSF46689	Homeodomain-like
RHE_CH01197	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_CH01198	SSF103473	MFS general substrate transporter
RHE_CH01199	SSF54427	NTF2-like
RHE_CH01201	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH01203	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
RHE_CH01203	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
RHE_CH01204	SSF56300	Metallo-dependent phosphatases
RHE_CH01205	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01207	SSF46689	Homeodomain-like
RHE_CH01208	SSF51658	Xylose isomerase-like
RHE_CH01209	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01209	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH01210	SSF53822	Periplasmic binding protein-like I
RHE_CH01212	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01213	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH01213	SSF53822	Periplasmic binding protein-like I
RHE_CH01214	SSF47175	Cytochromes
RHE_CH01215	SSF46626	Cytochrome c
RHE_CH01216	SSF47616	GST C-terminal domain-like
RHE_CH01216	SSF52833	Thioredoxin-like
RHE_CH01217	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH01219	SSF161111	Cation efflux protein transmembrane domain-like
RHE_CH01220	SSF56601	beta-lactamase/transpeptidase-like
RHE_CH01221	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_CH01221	SSF48452	TPR-like
RHE_CH01222	SSF50998	Quinoprotein alcohol dehydrogenase-like
RHE_CH01224	SSF103473	MFS general substrate transporter
RHE_CH01225	SSF160379	SP0830-like
RHE_CH01226	SSF50993	Peptidase/esterase 'gauge' domain
RHE_CH01226	SSF53474	alpha/beta-Hydrolases
RHE_CH01228	SSF88713	Glycoside hydrolase/deacetylase
RHE_CH01229	SSF51905	FAD/NAD(P)-binding domain
RHE_CH01232	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH01233	SSF52402	Adenine nucleotide alpha hydrolases-like
RHE_CH01235	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH01236	SSF141571	Pentapeptide repeat-like
RHE_CH01238	SSF50129	GroES-like
RHE_CH01239	SSF48592	GroEL equatorial domain-like
RHE_CH01239	SSF52029	GroEL apical domain-like
RHE_CH01239	SSF54849	GroEL-intermediate domain like
RHE_CH01241	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RHE_CH01242	SSF48208	Six-hairpin glycosidases
RHE_CH01244	SSF49764	HSP20-like chaperones
RHE_CH01245	SSF49764	HSP20-like chaperones
RHE_CH01247	SSF51316	Mss4-like
RHE_CH01250	SSF82649	SufE/NifU
RHE_CH01252	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH01252	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH01253	SSF47090	PGBD-like
RHE_CH01254	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RHE_CH01260	SSF160935	VPA0735-like
RHE_CH01261	SSF53955	Lysozyme-like
RHE_CH01261	SSF56601	beta-lactamase/transpeptidase-like
RHE_CH01263	SSF46689	Homeodomain-like
RHE_CH01263	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_CH01264	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01266	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH01270	SSF50129	GroES-like
RHE_CH01271	SSF48592	GroEL equatorial domain-like
RHE_CH01271	SSF52029	GroEL apical domain-like
RHE_CH01271	SSF54849	GroEL-intermediate domain like
RHE_CH01273	SSF50156	PDZ domain-like
RHE_CH01273	SSF50494	Trypsin-like serine proteases
RHE_CH01275	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01275	SSF53383	PLP-dependent transferases
RHE_CH01277	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01277	SSF53850	Periplasmic binding protein-like II
RHE_CH01278	SSF47616	GST C-terminal domain-like
RHE_CH01278	SSF52833	Thioredoxin-like
RHE_CH01279	SSF50475	FMN-binding split barrel
RHE_CH01280	SSF54427	NTF2-like
RHE_CH01281	SSF46689	Homeodomain-like
RHE_CH01281	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_CH01282	SSF53955	Lysozyme-like
RHE_CH01283	SSF54909	Dimeric alpha+beta barrel
RHE_CH01284	SSF103473	MFS general substrate transporter
RHE_CH01286	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_CH01286	SSF52172	CheY-like
RHE_CH01287	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH01287	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH01289	SSF48452	TPR-like
RHE_CH01290	SSF82093	Heme chaperone CcmE
RHE_CH01293	SSF50156	PDZ domain-like
RHE_CH01293	SSF50494	Trypsin-like serine proteases
RHE_CH01294	SSF52172	CheY-like
RHE_CH01295	SSF158472	HAMP domain-like
RHE_CH01295	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH01295	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH01296	SSF81301	Nucleotidyltransferase
RHE_CH01296	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
RHE_CH01297	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH01297	SSF55785	PYP-like sensor domain (PAS domain)
RHE_CH01297	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH01298	SSF55486	Metalloproteases ("zincins"), catalytic domain
RHE_CH01298	SSF63737	Leukotriene A4 hydrolase N-terminal domain
RHE_CH01299	SSF103481	Multidrug resistance efflux transporter EmrE
RHE_CH01302	SSF52141	Uracil-DNA glycosylase-like
RHE_CH01303	SSF53067	Actin-like ATPase domain
RHE_CH01304	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RHE_CH01304	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RHE_CH01304	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RHE_CH01305	SSF111369	HlyD-like secretion proteins
RHE_CH01306	SSF56112	Protein kinase-like (PK-like)
RHE_CH01307	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01308	SSF51905	FAD/NAD(P)-binding domain
RHE_CH01308	SSF54373	FAD-linked reductases, C-terminal domain
RHE_CH01308	SSF54862	4Fe-4S ferredoxins
RHE_CH01309	SSF141523	L,D-transpeptidase catalytic domain-like
RHE_CH01310	SSF103481	Multidrug resistance efflux transporter EmrE
RHE_CH01311	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01311	SSF54909	Dimeric alpha+beta barrel
RHE_CH01312	SSF158791	MgtE N-terminal domain-like
RHE_CH01312	SSF161093	MgtE membrane domain-like
RHE_CH01312	SSF54631	CBS-domain pair
RHE_CH01313	SSF103473	MFS general substrate transporter
RHE_CH01314	SSF111331	NAD kinase/diacylglycerol kinase-like
RHE_CH01315	SSF54368	Glutamine synthetase, N-terminal domain
RHE_CH01315	SSF55931	Glutamine synthetase/guanido kinase
RHE_CH01316	SSF53383	PLP-dependent transferases
RHE_CH01319	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH01322	SSF48452	TPR-like
RHE_CH01322	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RHE_CH01322	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RHE_CH01323	SSF54909	Dimeric alpha+beta barrel
RHE_CH01324	SSF54909	Dimeric alpha+beta barrel
RHE_CH01325	SSF54909	Dimeric alpha+beta barrel
RHE_CH01327	SSF53167	Purine and uridine phosphorylases
RHE_CH01329	SSF81901	HCP-like
RHE_CH01330	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH01331	SSF53383	PLP-dependent transferases
RHE_CH01332	SSF53098	Ribonuclease H-like
RHE_CH01336	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01336	SSF53850	Periplasmic binding protein-like II
RHE_CH01340	SSF46689	Homeodomain-like
RHE_CH01341	SSF51182	RmlC-like cupins
RHE_CH01342	SSF51658	Xylose isomerase-like
RHE_CH01343	SSF52467	DHS-like NAD/FAD-binding domain
RHE_CH01343	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RHE_CH01344	SSF53613	Ribokinase-like
RHE_CH01345	SSF46689	Homeodomain-like
RHE_CH01345	SSF53697	SIS domain
RHE_CH01346	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01346	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH01347	SSF51905	FAD/NAD(P)-binding domain
RHE_CH01347	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RHE_CH01349	SSF56935	Porins
RHE_CH01350	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01351	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01352	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RHE_CH01353	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RHE_CH01354	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH01356	SSF51126	Pectin lyase-like
RHE_CH01360	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01361	SSF48452	TPR-like
RHE_CH01362	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_CH01362	SSF52172	CheY-like
RHE_CH01363	SSF51161	Trimeric LpxA-like enzymes
RHE_CH01364	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01364	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH01365	SSF53383	PLP-dependent transferases
RHE_CH01366	SSF51161	Trimeric LpxA-like enzymes
RHE_CH01367	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01368	SSF53383	PLP-dependent transferases
RHE_CH01372	SSF49313	Cadherin-like
RHE_CH01372	SSF81296	E set domains
RHE_CH01373	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01374	SSF81296	E set domains
RHE_CH01375	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01377	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01377	SSF90123	ABC transporter transmembrane region
RHE_CH01378	SSF111369	HlyD-like secretion proteins
RHE_CH01379	SSF53474	alpha/beta-Hydrolases
RHE_CH01380	SSF48435	Bacterial muramidases
RHE_CH01380	SSF53955	Lysozyme-like
RHE_CH01381	SSF51569	Aldolase
RHE_CH01382	SSF74982	Small protein B (SmpB)
RHE_CH01384	SSF63562	RPB6/omega subunit-like
RHE_CH01385	SSF109604	HD-domain/PDEase-like
RHE_CH01385	SSF55021	ACT-like
RHE_CH01385	SSF81271	TGS-like
RHE_CH01385	SSF81301	Nucleotidyltransferase
RHE_CH01388	SSF56214	4'-phosphopantetheinyl transferase
RHE_CH01389	SSF51306	LexA/Signal peptidase
RHE_CH01390	SSF54768	dsRNA-binding domain-like
RHE_CH01390	SSF69065	RNase III domain-like
RHE_CH01391	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01391	SSF54814	Prokaryotic type KH domain (KH-domain type II)
RHE_CH01392	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01392	SSF51206	cAMP-binding domain-like
RHE_CH01393	SSF52172	CheY-like
RHE_CH01394	SSF50249	Nucleic acid-binding proteins
RHE_CH01394	SSF57863	ArfGap/RecO-like zinc finger
RHE_CH01395	SSF51430	NAD(P)-linked oxidoreductase
RHE_CH01396	SSF141673	MOSC N-terminal domain-like
RHE_CH01396	SSF50800	PK beta-barrel domain-like
RHE_CH01397	SSF109604	HD-domain/PDEase-like
RHE_CH01398	SSF141868	EAL domain-like
RHE_CH01398	SSF55073	Nucleotide cyclase
RHE_CH01398	SSF55785	PYP-like sensor domain (PAS domain)
RHE_CH01400	SSF49329	Cu,Zn superoxide dismutase-like
RHE_CH01401	SSF50182	Sm-like ribonucleoproteins
RHE_CH01401	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
RHE_CH01401	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
RHE_CH01402	SSF52799	(Phosphotyrosine protein) phosphatases II
RHE_CH01403	SSF109604	HD-domain/PDEase-like
RHE_CH01404	SSF103025	Folate-binding domain
RHE_CH01407	SSF55811	Nudix
RHE_CH01408	SSF103481	Multidrug resistance efflux transporter EmrE
RHE_CH01409	SSF143081	BB1717-like
RHE_CH01412	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01413	SSF55961	Bet v1-like
RHE_CH01414	SSF52096	ClpP/crotonase
RHE_CH01415	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01415	SSF90123	ABC transporter transmembrane region
RHE_CH01417	SSF102405	MCP/YpsA-like
RHE_CH01418	SSF103481	Multidrug resistance efflux transporter EmrE
RHE_CH01419	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
RHE_CH01419	SSF51569	Aldolase
RHE_CH01420	SSF53474	alpha/beta-Hydrolases
RHE_CH01421	SSF51316	Mss4-like
RHE_CH01422	SSF51316	Mss4-like
RHE_CH01423	SSF51316	Mss4-like
RHE_CH01424	SSF52980	Restriction endonuclease-like
RHE_CH01425	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RHE_CH01425	SSF52374	Nucleotidylyl transferase
RHE_CH01426	SSF51445	(Trans)glycosidases
RHE_CH01427	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01428	SSF53271	PRTase-like
RHE_CH01428	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RHE_CH01430	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01430	SSF54211	Ribosomal protein S5 domain 2-like
RHE_CH01432	SSF50621	Alanine racemase C-terminal domain-like
RHE_CH01432	SSF51419	PLP-binding barrel
RHE_CH01433	SSF46689	Homeodomain-like
RHE_CH01433	SSF51215	Regulatory protein AraC
RHE_CH01436	SSF48024	N-terminal domain of DnaB helicase
RHE_CH01436	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01437	SSF55653	Ribosomal protein L9 C-domain
RHE_CH01437	SSF55658	L9 N-domain-like
RHE_CH01439	SSF46911	Ribosomal protein S18
RHE_CH01440	SSF54995	Ribosomal protein S6
RHE_CH01441	SSF51430	NAD(P)-linked oxidoreductase
RHE_CH01442	SSF52151	FabD/lysophospholipase-like
RHE_CH01442	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
RHE_CH01443	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01444	SSF47336	ACP-like
RHE_CH01445	SSF53901	Thiolase-like
RHE_CH01448	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01449	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH01450	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RHE_CH01451	SSF109998	Triger factor/SurA peptide-binding domain-like
RHE_CH01455	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
RHE_CH01456	SSF52949	Macro domain-like
RHE_CH01456	SSF53187	Zn-dependent exopeptidases
RHE_CH01457	SSF102400	DNA polymerase III chi subunit
RHE_CH01458	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01459	SSF50993	Peptidase/esterase 'gauge' domain
RHE_CH01459	SSF53474	alpha/beta-Hydrolases
RHE_CH01460	SSF51679	Bacterial luciferase-like
RHE_CH01461	SSF103378	2-methylcitrate dehydratase PrpD
RHE_CH01462	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01463	SSF161098	MetI-like
RHE_CH01464	SSF161098	MetI-like
RHE_CH01465	SSF53850	Periplasmic binding protein-like II
RHE_CH01466	SSF46689	Homeodomain-like
RHE_CH01466	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_CH01467	SSF88713	Glycoside hydrolase/deacetylase
RHE_CH01468	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01469	SSF55073	Nucleotide cyclase
RHE_CH01470	SSF109854	DinB/YfiT-like putative metalloenzymes
RHE_CH01471	SSF47616	GST C-terminal domain-like
RHE_CH01471	SSF52833	Thioredoxin-like
RHE_CH01472	SSF54919	Nucleoside diphosphate kinase, NDK
RHE_CH01474	SSF160904	Jann2411-like
RHE_CH01476	SSF54690	Molybdopterin synthase subunit MoaE
RHE_CH01477	SSF54285	MoaD/ThiS
RHE_CH01479	SSF46600	C-terminal UvrC-binding domain of UvrB
RHE_CH01479	SSF47781	RuvA domain 2-like
RHE_CH01479	SSF82771	GIY-YIG endonuclease
RHE_CH01480	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01481	SSF56925	OMPA-like
RHE_CH01482	SSF47616	GST C-terminal domain-like
RHE_CH01482	SSF52833	Thioredoxin-like
RHE_CH01483	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH01484	SSF50692	ADC-like
RHE_CH01484	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
RHE_CH01485	SSF55811	Nudix
RHE_CH01486	SSF51338	Composite domain of metallo-dependent hydrolases
RHE_CH01486	SSF51556	Metallo-dependent hydrolases
RHE_CH01487	SSF53328	Formyltransferase
RHE_CH01488	SSF55326	PurM N-terminal domain-like
RHE_CH01488	SSF56042	PurM C-terminal domain-like
RHE_CH01490	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01491	SSF140356	PPK N-terminal domain-like
RHE_CH01491	SSF143724	PHP14-like
RHE_CH01491	SSF56024	Phospholipase D/nuclease
RHE_CH01492	SSF109604	HD-domain/PDEase-like
RHE_CH01492	SSF53067	Actin-like ATPase domain
RHE_CH01494	SSF55073	Nucleotide cyclase
RHE_CH01495	SSF47819	HRDC-like
RHE_CH01495	SSF53098	Ribonuclease H-like
RHE_CH01496	SSF49503	Cupredoxins
RHE_CH01497	SSF50249	Nucleic acid-binding proteins
RHE_CH01497	SSF55261	GAD domain-like
RHE_CH01497	SSF55681	Class II aaRS and biotin synthetases
RHE_CH01499	SSF101904	GyrA/ParC C-terminal domain-like
RHE_CH01499	SSF56719	Type II DNA topoisomerase
RHE_CH01501	SSF103481	Multidrug resistance efflux transporter EmrE
RHE_CH01502	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH01504	SSF51569	Aldolase
RHE_CH01506	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01507	SSF141523	L,D-transpeptidase catalytic domain-like
RHE_CH01507	SSF47090	PGBD-like
RHE_CH01508	SSF53383	PLP-dependent transferases
RHE_CH01510	SSF53597	Dihydrofolate reductase-like
RHE_CH01510	SSF53927	Cytidine deaminase-like
RHE_CH01511	SSF63380	Riboflavin synthase domain-like
RHE_CH01512	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH01513	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01514	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01515	SSF51182	RmlC-like cupins
RHE_CH01517	SSF53383	PLP-dependent transferases
RHE_CH01518	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01518	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH01519	SSF52440	PreATP-grasp domain
RHE_CH01519	SSF56059	Glutathione synthetase ATP-binding domain-like
RHE_CH01520	SSF102114	Radical SAM enzymes
RHE_CH01520	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH01521	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH01522	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH01523	SSF51182	RmlC-like cupins
RHE_CH01525	SSF52121	Lumazine synthase
RHE_CH01526	SSF48013	NusB-like
RHE_CH01531	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RHE_CH01532	SSF53901	Thiolase-like
RHE_CH01533	SSF47729	IHF-like DNA-binding proteins
RHE_CH01534	SSF46955	Putative DNA-binding domain
RHE_CH01535	SSF52172	CheY-like
RHE_CH01536	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH01536	SSF52172	CheY-like
RHE_CH01536	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH01539	SSF46689	Homeodomain-like
RHE_CH01542	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH01544	SSF48208	Six-hairpin glycosidases
RHE_CH01545	SSF48452	TPR-like
RHE_CH01546	SSF56784	HAD-like
RHE_CH01549	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH01551	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH01552	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01552	SSF53067	Actin-like ATPase domain
RHE_CH01553	SSF48208	Six-hairpin glycosidases
RHE_CH01554	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH01555	SSF53850	Periplasmic binding protein-like II
RHE_CH01556	SSF161098	MetI-like
RHE_CH01557	SSF161098	MetI-like
RHE_CH01559	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01560	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RHE_CH01562	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01563	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH01567	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01567	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH01568	SSF52768	Arginase/deacetylase
RHE_CH01569	SSF103473	MFS general substrate transporter
RHE_CH01570	SSF54211	Ribosomal protein S5 domain 2-like
RHE_CH01571	SSF52161	Ribosomal protein L13
RHE_CH01572	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01572	SSF53850	Periplasmic binding protein-like II
RHE_CH01573	SSF52096	ClpP/crotonase
RHE_CH01574	SSF103481	Multidrug resistance efflux transporter EmrE
RHE_CH01576	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01577	SSF53383	PLP-dependent transferases
RHE_CH01580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01581	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH01583	SSF51182	RmlC-like cupins
RHE_CH01584	SSF141868	EAL domain-like
RHE_CH01584	SSF55073	Nucleotide cyclase
RHE_CH01585	SSF48264	Cytochrome P450
RHE_CH01586	SSF55073	Nucleotide cyclase
RHE_CH01587	SSF52096	ClpP/crotonase
RHE_CH01588	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01588	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RHE_CH01589	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01589	SSF54211	Ribosomal protein S5 domain 2-like
RHE_CH01589	SSF88697	PUA domain-like
RHE_CH01590	SSF47729	IHF-like DNA-binding proteins
RHE_CH01591	SSF103481	Multidrug resistance efflux transporter EmrE
RHE_CH01592	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
RHE_CH01593	SSF51430	NAD(P)-linked oxidoreductase
RHE_CH01594	SSF51182	RmlC-like cupins
RHE_CH01595	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH01597	SSF52833	Thioredoxin-like
RHE_CH01603	SSF56770	HydA/Nqo6-like
RHE_CH01604	SSF143243	Nqo5-like
RHE_CH01605	SSF158446	IVS-encoded protein-like
RHE_CH01606	SSF56762	HydB/Nqo4-like
RHE_CH01608	SSF52833	Thioredoxin-like
RHE_CH01609	SSF140490	Nqo1C-terminal domain-like
RHE_CH01609	SSF142019	Nqo1 FMN-binding domain-like
RHE_CH01609	SSF142984	Nqo1 middle domain-like
RHE_CH01611	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
RHE_CH01611	SSF54292	2Fe-2S ferredoxin-like
RHE_CH01611	SSF54862	4Fe-4S ferredoxins
RHE_CH01613	SSF54862	4Fe-4S ferredoxins
RHE_CH01619	SSF50037	C-terminal domain of transcriptional repressors
RHE_CH01619	SSF55681	Class II aaRS and biotin synthetases
RHE_CH01620	SSF56281	Metallo-hydrolase/oxidoreductase
RHE_CH01621	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH01623	SSF52954	Class II aaRS ABD-related
RHE_CH01623	SSF55681	Class II aaRS and biotin synthetases
RHE_CH01625	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01627	SSF160975	AF1531-like
RHE_CH01627	SSF89550	PHP domain-like
RHE_CH01628	SSF141523	L,D-transpeptidase catalytic domain-like
RHE_CH01628	SSF47090	PGBD-like
RHE_CH01629	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
RHE_CH01629	SSF56672	DNA/RNA polymerases
RHE_CH01630	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH01631	SSF56784	HAD-like
RHE_CH01632	SSF52172	CheY-like
RHE_CH01633	SSF52172	CheY-like
RHE_CH01633	SSF55073	Nucleotide cyclase
RHE_CH01634	SSF57829	Zn-binding ribosomal proteins
RHE_CH01635	SSF103473	MFS general substrate transporter
RHE_CH01637	SSF50249	Nucleic acid-binding proteins
RHE_CH01638	SSF56712	Prokaryotic type I DNA topoisomerase
RHE_CH01638	SSF57783	Zinc beta-ribbon
RHE_CH01639	SSF102405	MCP/YpsA-like
RHE_CH01641	SSF51338	Composite domain of metallo-dependent hydrolases
RHE_CH01641	SSF51556	Metallo-dependent hydrolases
RHE_CH01642	SSF53671	Aspartate/ornithine carbamoyltransferase
RHE_CH01643	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RHE_CH01643	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RHE_CH01644	SSF88723	PIN domain-like
RHE_CH01645	SSF50249	Nucleic acid-binding proteins
RHE_CH01646	SSF53187	Zn-dependent exopeptidases
RHE_CH01647	SSF53955	Lysozyme-like
RHE_CH01647	SSF56601	beta-lactamase/transpeptidase-like
RHE_CH01648	SSF75620	Release factor
RHE_CH01649	SSF53474	alpha/beta-Hydrolases
RHE_CH01651	SSF111331	NAD kinase/diacylglycerol kinase-like
RHE_CH01654	SSF50882	beta-Barrel protease inhibitors
RHE_CH01655	SSF55315	L30e-like
RHE_CH01655	SSF75217	alpha/beta knot
RHE_CH01658	SSF50447	Translation proteins
RHE_CH01658	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
RHE_CH01658	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01659	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01662	SSF50104	Translation proteins SH3-like domain
RHE_CH01662	SSF82679	N-utilization substance G protein NusG, N-terminal domain
RHE_CH01663	SSF46906	Ribosomal protein L11, C-terminal domain
RHE_CH01663	SSF54747	Ribosomal L11/L12e N-terminal domain
RHE_CH01664	SSF56808	Ribosomal protein L1
RHE_CH01665	SSF160369	Ribosomal protein L10-like
RHE_CH01666	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
RHE_CH01666	SSF54736	ClpS-like
RHE_CH01667	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
RHE_CH01668	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
RHE_CH01670	SSF50249	Nucleic acid-binding proteins
RHE_CH01671	SSF47973	Ribosomal protein S7
RHE_CH01672	SSF50447	Translation proteins
RHE_CH01672	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01672	SSF54211	Ribosomal protein S5 domain 2-like
RHE_CH01672	SSF54980	EF-G C-terminal domain-like
RHE_CH01673	SSF50447	Translation proteins
RHE_CH01673	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
RHE_CH01673	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01674	SSF54999	Ribosomal protein S10
RHE_CH01675	SSF50447	Translation proteins
RHE_CH01676	SSF52166	Ribosomal protein L4
RHE_CH01677	SSF54189	Ribosomal proteins S24e, L23 and L15e
RHE_CH01678	SSF50104	Translation proteins SH3-like domain
RHE_CH01678	SSF50249	Nucleic acid-binding proteins
RHE_CH01679	SSF54570	Ribosomal protein S19
RHE_CH01680	SSF54843	Ribosomal protein L22
RHE_CH01681	SSF54814	Prokaryotic type KH domain (KH-domain type II)
RHE_CH01681	SSF54821	Ribosomal protein S3 C-terminal domain
RHE_CH01682	SSF54686	Ribosomal protein L16p/L10e
RHE_CH01683	SSF46561	Ribosomal protein L29 (L29p)
RHE_CH01684	SSF50249	Nucleic acid-binding proteins
RHE_CH01685	SSF50193	Ribosomal protein L14
RHE_CH01686	SSF50104	Translation proteins SH3-like domain
RHE_CH01687	SSF55282	RL5-like
RHE_CH01688	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RHE_CH01689	SSF56047	Ribosomal protein S8
RHE_CH01690	SSF56053	Ribosomal protein L6
RHE_CH01691	SSF53137	Translational machinery components
RHE_CH01692	SSF54211	Ribosomal protein S5 domain 2-like
RHE_CH01692	SSF54768	dsRNA-binding domain-like
RHE_CH01693	SSF55129	Ribosomal protein L30p/L7e
RHE_CH01694	SSF52080	Ribosomal proteins L15p and L18e
RHE_CH01695	SSF103491	Preprotein translocase SecY subunit
RHE_CH01696	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01697	SSF46946	S13-like H2TH domain
RHE_CH01698	SSF53137	Translational machinery components
RHE_CH01699	SSF47789	C-terminal domain of RNA polymerase alpha subunit
RHE_CH01699	SSF55257	RBP11-like subunits of RNA polymerase
RHE_CH01699	SSF56553	Insert subdomain of RNA polymerase alpha subunit
RHE_CH01700	SSF64263	Prokaryotic ribosomal protein L17
RHE_CH01703	SSF56524	Oxidoreductase molybdopterin-binding domain
RHE_CH01704	SSF143975	IlvD/EDD N-terminal domain-like
RHE_CH01704	SSF52016	LeuD/IlvD-like
RHE_CH01707	SSF50156	PDZ domain-like
RHE_CH01707	SSF50494	Trypsin-like serine proteases
RHE_CH01708	SSF48019	post-AAA+ oligomerization domain-like
RHE_CH01708	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01709	SSF141099	Atu1913-like
RHE_CH01710	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RHE_CH01710	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01711	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01712	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01712	SSF53850	Periplasmic binding protein-like II
RHE_CH01713	SSF52309	N-(deoxy)ribosyltransferase-like
RHE_CH01714	SSF53474	alpha/beta-Hydrolases
RHE_CH01715	SSF69118	AhpD-like
RHE_CH01716	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH01717	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH01718	SSF55785	PYP-like sensor domain (PAS domain)
RHE_CH01719	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH01719	SSF53822	Periplasmic binding protein-like I
RHE_CH01720	SSF100950	NagB/RpiA/CoA transferase-like
RHE_CH01721	SSF52096	ClpP/crotonase
RHE_CH01722	SSF53720	ALDH-like
RHE_CH01723	SSF53850	Periplasmic binding protein-like II
RHE_CH01724	SSF161098	MetI-like
RHE_CH01725	SSF161098	MetI-like
RHE_CH01726	SSF50331	MOP-like
RHE_CH01726	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01727	SSF51905	FAD/NAD(P)-binding domain
RHE_CH01728	SSF51905	FAD/NAD(P)-binding domain
RHE_CH01728	SSF54373	FAD-linked reductases, C-terminal domain
RHE_CH01729	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01729	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH01730	SSF51905	FAD/NAD(P)-binding domain
RHE_CH01731	SSF56219	DNase I-like
RHE_CH01734	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_CH01734	SSF52172	CheY-like
RHE_CH01735	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH01736	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH01741	SSF141523	L,D-transpeptidase catalytic domain-like
RHE_CH01741	SSF47090	PGBD-like
RHE_CH01742	SSF56534	Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
RHE_CH01743	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01743	SSF54909	Dimeric alpha+beta barrel
RHE_CH01744	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01744	SSF54909	Dimeric alpha+beta barrel
RHE_CH01745	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH01746	SSF51182	RmlC-like cupins
RHE_CH01747	SSF56529	FAH
RHE_CH01748	SSF47616	GST C-terminal domain-like
RHE_CH01748	SSF52833	Thioredoxin-like
RHE_CH01749	SSF55785	PYP-like sensor domain (PAS domain)
RHE_CH01750	SSF52151	FabD/lysophospholipase-like
RHE_CH01752	SSF53254	Phosphoglycerate mutase-like
RHE_CH01753	SSF51998	PFL-like glycyl radical enzymes
RHE_CH01753	SSF75625	YebC-like
RHE_CH01754	SSF53271	PRTase-like
RHE_CH01755	SSF52402	Adenine nucleotide alpha hydrolases-like
RHE_CH01756	SSF53218	Molybdenum cofactor biosynthesis proteins
RHE_CH01759	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RHE_CH01759	SSF55021	ACT-like
RHE_CH01761	SSF55073	Nucleotide cyclase
RHE_CH01762	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01763	SSF46689	Homeodomain-like
RHE_CH01763	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_CH01764	SSF52218	Flavoproteins
RHE_CH01765	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01765	SSF53850	Periplasmic binding protein-like II
RHE_CH01766	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
RHE_CH01766	SSF56300	Metallo-dependent phosphatases
RHE_CH01767	SSF141371	PilZ domain-like
RHE_CH01768	SSF103481	Multidrug resistance efflux transporter EmrE
RHE_CH01769	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01769	SSF54909	Dimeric alpha+beta barrel
RHE_CH01770	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01770	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RHE_CH01772	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH01773	SSF52821	Rhodanese/Cell cycle control phosphatase
RHE_CH01774	SSF50447	Translation proteins
RHE_CH01774	SSF55186	ThrRS/AlaRS common domain
RHE_CH01775	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RHE_CH01776	SSF51182	RmlC-like cupins
RHE_CH01777	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01779	SSF56784	HAD-like
RHE_CH01780	SSF50692	ADC-like
RHE_CH01780	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
RHE_CH01781	SSF50022	ISP domain
RHE_CH01782	SSF51905	FAD/NAD(P)-binding domain
RHE_CH01782	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
RHE_CH01782	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
RHE_CH01783	SSF103473	MFS general substrate transporter
RHE_CH01784	SSF53850	Periplasmic binding protein-like II
RHE_CH01785	SSF52172	CheY-like
RHE_CH01786	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH01786	SSF53822	Periplasmic binding protein-like I
RHE_CH01787	SSF53822	Periplasmic binding protein-like I
RHE_CH01788	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01791	SSF52833	Thioredoxin-like
RHE_CH01792	SSF53955	Lysozyme-like
RHE_CH01793	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01794	SSF82544	GckA/TtuD-like
RHE_CH01802	SSF69047	Hypothetical protein YjbJ
RHE_CH01809	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH01811	SSF46589	tRNA-binding arm
RHE_CH01811	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RHE_CH01811	SSF50677	ValRS/IleRS/LeuRS editing domain
RHE_CH01811	SSF52374	Nucleotidylyl transferase
RHE_CH01812	SSF56935	Porins
RHE_CH01814	SSF81901	HCP-like
RHE_CH01815	SSF56219	DNase I-like
RHE_CH01816	SSF89360	HesB-like domain
RHE_CH01817	SSF109604	HD-domain/PDEase-like
RHE_CH01818	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RHE_CH01818	SSF52374	Nucleotidylyl transferase
RHE_CH01818	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
RHE_CH01820	SSF51445	(Trans)glycosidases
RHE_CH01822	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01826	SSF46589	tRNA-binding arm
RHE_CH01826	SSF55681	Class II aaRS and biotin synthetases
RHE_CH01827	SSF64167	SurE-like
RHE_CH01828	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH01829	SSF51261	Duplicated hybrid motif
RHE_CH01829	SSF54106	LysM domain
RHE_CH01830	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01832	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RHE_CH01833	SSF64076	MTH938-like
RHE_CH01834	SSF48576	Terpenoid synthases
RHE_CH01836	SSF51905	FAD/NAD(P)-binding domain
RHE_CH01842	SSF102735	Trigger factor ribosome-binding domain
RHE_CH01842	SSF109998	Triger factor/SurA peptide-binding domain-like
RHE_CH01842	SSF54534	FKBP-like
RHE_CH01843	SSF54427	NTF2-like
RHE_CH01844	SSF102114	Radical SAM enzymes
RHE_CH01845	SSF56219	DNase I-like
RHE_CH01846	SSF51905	FAD/NAD(P)-binding domain
RHE_CH01846	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RHE_CH01847	SSF51395	FMN-linked oxidoreductases
RHE_CH01848	SSF102712	JAB1/MPN domain
RHE_CH01848	SSF47781	RuvA domain 2-like
RHE_CH01849	SSF55920	Creatinase/aminopeptidase
RHE_CH01850	SSF46689	Homeodomain-like
RHE_CH01850	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_CH01852	SSF53098	Ribonuclease H-like
RHE_CH01853	SSF56281	Metallo-hydrolase/oxidoreductase
RHE_CH01854	SSF141000	Glu-tRNAGln amidotransferase C subunit
RHE_CH01855	SSF75304	Amidase signature (AS) enzymes
RHE_CH01860	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH01862	SSF55931	Glutamine synthetase/guanido kinase
RHE_CH01862	SSF89095	GatB/YqeY motif
RHE_CH01863	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH01864	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH01868	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH01869	SSF51246	Rudiment single hybrid motif
RHE_CH01869	SSF52440	PreATP-grasp domain
RHE_CH01869	SSF56059	Glutathione synthetase ATP-binding domain-like
RHE_CH01870	SSF51230	Single hybrid motif
RHE_CH01871	SSF52304	Type II 3-dehydroquinate dehydratase
RHE_CH01872	SSF52833	Thioredoxin-like
RHE_CH01873	SSF53383	PLP-dependent transferases
RHE_CH01875	SSF53474	alpha/beta-Hydrolases
RHE_CH01877	SSF53383	PLP-dependent transferases
RHE_CH01878	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01878	SSF55021	ACT-like
RHE_CH01878	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH01879	SSF64182	DHH phosphoesterases
RHE_CH01883	SSF55166	Hedgehog/DD-peptidase
RHE_CH01884	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH01885	SSF50249	Nucleic acid-binding proteins
RHE_CH01890	SSF54909	Dimeric alpha+beta barrel
RHE_CH01891	SSF143081	BB1717-like
RHE_CH01892	SSF51120	beta-Roll
RHE_CH01892	SSF51126	Pectin lyase-like
RHE_CH01895	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01896	SSF161098	MetI-like
RHE_CH01897	SSF161098	MetI-like
RHE_CH01898	SSF53850	Periplasmic binding protein-like II
RHE_CH01899	SSF53383	PLP-dependent transferases
RHE_CH01900	SSF51905	FAD/NAD(P)-binding domain
RHE_CH01900	SSF54373	FAD-linked reductases, C-terminal domain
RHE_CH01902	SSF53474	alpha/beta-Hydrolases
RHE_CH01903	SSF51161	Trimeric LpxA-like enzymes
RHE_CH01906	SSF54736	ClpS-like
RHE_CH01907	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01907	SSF81923	Double Clp-N motif
RHE_CH01908	SSF54197	HIT-like
RHE_CH01909	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH01910	SSF51695	PLC-like phosphodiesterases
RHE_CH01911	SSF55298	YjgF-like
RHE_CH01913	SSF52313	Ribosomal protein S2
RHE_CH01914	SSF46934	UBA-like
RHE_CH01914	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
RHE_CH01915	SSF53633	Carbamate kinase-like
RHE_CH01916	SSF55194	Ribosome recycling factor, RRF
RHE_CH01917	SSF64005	Undecaprenyl diphosphate synthase
RHE_CH01919	SSF50156	PDZ domain-like
RHE_CH01921	SSF51161	Trimeric LpxA-like enzymes
RHE_CH01922	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RHE_CH01923	SSF51161	Trimeric LpxA-like enzymes
RHE_CH01925	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RHE_CH01926	SSF48256	Citrate synthase
RHE_CH01928	SSF46785	"Winged helix" DNA-binding domain
RHE_CH01928	SSF51306	LexA/Signal peptidase
RHE_CH01929	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH01930	SSF51569	Aldolase
RHE_CH01931	SSF51604	Enolase C-terminal domain-like
RHE_CH01931	SSF54826	Enolase N-terminal domain-like
RHE_CH01933	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RHE_CH01934	SSF51230	Single hybrid motif
RHE_CH01934	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RHE_CH01934	SSF52922	TK C-terminal domain-like
RHE_CH01935	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
RHE_CH01935	SSF51230	Single hybrid motif
RHE_CH01935	SSF52777	CoA-dependent acyltransferases
RHE_CH01936	SSF52266	SGNH hydrolase
RHE_CH01937	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH01938	SSF51905	FAD/NAD(P)-binding domain
RHE_CH01938	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RHE_CH01941	SSF102114	Radical SAM enzymes
RHE_CH01942	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01943	SSF55961	Bet v1-like
RHE_CH01944	SSF142433	CinA-like
RHE_CH01945	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH01945	SSF69765	IpsF-like
RHE_CH01946	SSF51395	FMN-linked oxidoreductases
RHE_CH01947	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH01947	SSF55785	PYP-like sensor domain (PAS domain)
RHE_CH01947	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH01948	SSF46689	Homeodomain-like
RHE_CH01948	SSF52172	CheY-like
RHE_CH01948	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01949	SSF51182	RmlC-like cupins
RHE_CH01950	SSF51430	NAD(P)-linked oxidoreductase
RHE_CH01951	SSF158472	HAMP domain-like
RHE_CH01951	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH01951	SSF55785	PYP-like sensor domain (PAS domain)
RHE_CH01951	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH01952	SSF46689	Homeodomain-like
RHE_CH01952	SSF52172	CheY-like
RHE_CH01952	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01953	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
RHE_CH01954	SSF50182	Sm-like ribonucleoproteins
RHE_CH01955	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01956	SSF101386	all-alpha NTP pyrophosphatases
RHE_CH01957	SSF53927	Cytidine deaminase-like
RHE_CH01958	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH01958	SSF53790	Tetrapyrrole methylase
RHE_CH01958	SSF75615	Siroheme synthase middle domains-like
RHE_CH01960	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
RHE_CH01960	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
RHE_CH01962	SSF51905	FAD/NAD(P)-binding domain
RHE_CH01967	SSF56349	DNA breaking-rejoining enzymes
RHE_CH01969	SSF52129	Caspase-like
RHE_CH01975	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH01977	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH01979	SSF53383	PLP-dependent transferases
RHE_CH01980	SSF56784	HAD-like
RHE_CH01981	SSF103378	2-methylcitrate dehydratase PrpD
RHE_CH01982	SSF103481	Multidrug resistance efflux transporter EmrE
RHE_CH01987	SSF56349	DNA breaking-rejoining enzymes
RHE_CH01993	SSF46689	Homeodomain-like
RHE_CH01993	SSF53041	Resolvase-like
RHE_CH01996	SSF102712	JAB1/MPN domain
RHE_CH01997	SSF54495	UBC-like
RHE_CH01997	SSF69572	Activating enzymes of the ubiquitin-like proteins
RHE_CH01998	SSF81301	Nucleotidyltransferase
RHE_CH02002	SSF109709	KorB DNA-binding domain-like
RHE_CH02002	SSF110849	ParB/Sulfiredoxin
RHE_CH02005	SSF55073	Nucleotide cyclase
RHE_CH02005	SSF55785	PYP-like sensor domain (PAS domain)
RHE_CH02009	SSF56349	DNA breaking-rejoining enzymes
RHE_CH02010	SSF48295	TrpR-like
RHE_CH02016	SSF48295	TrpR-like
RHE_CH02021	SSF141523	L,D-transpeptidase catalytic domain-like
RHE_CH02023	SSF51905	FAD/NAD(P)-binding domain
RHE_CH02025	SSF55073	Nucleotide cyclase
RHE_CH02026	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02027	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RHE_CH02028	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02028	SSF90123	ABC transporter transmembrane region
RHE_CH02031	SSF55073	Nucleotide cyclase
RHE_CH02034	SSF51905	FAD/NAD(P)-binding domain
RHE_CH02034	SSF52833	Thioredoxin-like
RHE_CH02035	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02036	SSF54427	NTF2-like
RHE_CH02037	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02038	SSF143744	GlcG-like
RHE_CH02039	SSF46689	Homeodomain-like
RHE_CH02040	SSF55298	YjgF-like
RHE_CH02041	SSF52218	Flavoproteins
RHE_CH02042	SSF55103	FAD-linked oxidases, C-terminal domain
RHE_CH02042	SSF56176	FAD-binding/transporter-associated domain-like
RHE_CH02043	SSF51338	Composite domain of metallo-dependent hydrolases
RHE_CH02043	SSF51556	Metallo-dependent hydrolases
RHE_CH02044	SSF161098	MetI-like
RHE_CH02045	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02046	SSF53850	Periplasmic binding protein-like II
RHE_CH02047	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02047	SSF53850	Periplasmic binding protein-like II
RHE_CH02048	SSF102215	Creatininase
RHE_CH02050	SSF52317	Class I glutamine amidotransferase-like
RHE_CH02051	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02051	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH02052	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02052	SSF53067	Actin-like ATPase domain
RHE_CH02053	SSF53850	Periplasmic binding protein-like II
RHE_CH02054	SSF161098	MetI-like
RHE_CH02055	SSF161098	MetI-like
RHE_CH02056	SSF50331	MOP-like
RHE_CH02056	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02057	SSF51569	Aldolase
RHE_CH02058	SSF51658	Xylose isomerase-like
RHE_CH02059	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02059	SSF48008	GntR ligand-binding domain-like
RHE_CH02060	SSF53850	Periplasmic binding protein-like II
RHE_CH02061	SSF161098	MetI-like
RHE_CH02062	SSF161098	MetI-like
RHE_CH02063	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02064	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02065	SSF52218	Flavoproteins
RHE_CH02066	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH02066	SSF53822	Periplasmic binding protein-like I
RHE_CH02068	SSF53850	Periplasmic binding protein-like II
RHE_CH02069	SSF161098	MetI-like
RHE_CH02070	SSF161098	MetI-like
RHE_CH02071	SSF50331	MOP-like
RHE_CH02071	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02073	SSF51316	Mss4-like
RHE_CH02074	SSF111369	HlyD-like secretion proteins
RHE_CH02075	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02077	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02077	SSF48008	GntR ligand-binding domain-like
RHE_CH02078	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
RHE_CH02078	SSF63380	Riboflavin synthase domain-like
RHE_CH02080	SSF50129	GroES-like
RHE_CH02080	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02081	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02085	SSF53822	Periplasmic binding protein-like I
RHE_CH02086	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02089	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02089	SSF48008	GntR ligand-binding domain-like
RHE_CH02090	SSF51161	Trimeric LpxA-like enzymes
RHE_CH02090	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH02091	SSF53697	SIS domain
RHE_CH02091	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RHE_CH02093	SSF50249	Nucleic acid-binding proteins
RHE_CH02093	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02094	SSF109910	YgfY-like
RHE_CH02095	SSF141259	CarD-like
RHE_CH02095	SSF143517	TRCF domain-like
RHE_CH02095	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02096	SSF82784	OsmC-like
RHE_CH02097	SSF81301	Nucleotidyltransferase
RHE_CH02098	SSF52833	Thioredoxin-like
RHE_CH02099	SSF53850	Periplasmic binding protein-like II
RHE_CH02101	SSF141255	YccV-like
RHE_CH02102	SSF54368	Glutamine synthetase, N-terminal domain
RHE_CH02102	SSF55931	Glutamine synthetase/guanido kinase
RHE_CH02103	SSF54913	GlnB-like
RHE_CH02104	SSF53613	Ribokinase-like
RHE_CH02104	SSF64153	YjeF N-terminal domain-like
RHE_CH02105	SSF117396	TM1631-like
RHE_CH02106	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH02107	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02108	SSF50249	Nucleic acid-binding proteins
RHE_CH02110	SSF101904	GyrA/ParC C-terminal domain-like
RHE_CH02110	SSF56719	Type II DNA topoisomerase
RHE_CH02113	SSF52374	Nucleotidylyl transferase
RHE_CH02114	SSF50891	Cyclophilin-like
RHE_CH02115	SSF50891	Cyclophilin-like
RHE_CH02116	SSF111337	QueA-like
RHE_CH02117	SSF51713	tRNA-guanine transglycosylase
RHE_CH02120	SSF53901	Thiolase-like
RHE_CH02121	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02122	SSF55811	Nudix
RHE_CH02123	SSF56655	Carbohydrate phosphatase
RHE_CH02124	SSF50331	MOP-like
RHE_CH02124	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02125	SSF161098	MetI-like
RHE_CH02126	SSF53850	Periplasmic binding protein-like II
RHE_CH02127	SSF53850	Periplasmic binding protein-like II
RHE_CH02128	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_CH02128	SSF52172	CheY-like
RHE_CH02129	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH02129	SSF55785	PYP-like sensor domain (PAS domain)
RHE_CH02129	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH02133	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH02134	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02135	SSF103473	MFS general substrate transporter
RHE_CH02136	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_CH02136	SSF48452	TPR-like
RHE_CH02137	SSF52833	Thioredoxin-like
RHE_CH02138	SSF48452	TPR-like
RHE_CH02138	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02138	SSF55073	Nucleotide cyclase
RHE_CH02139	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02140	SSF161098	MetI-like
RHE_CH02141	SSF161098	MetI-like
RHE_CH02142	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02142	SSF48008	GntR ligand-binding domain-like
RHE_CH02143	SSF52768	Arginase/deacetylase
RHE_CH02144	SSF53850	Periplasmic binding protein-like II
RHE_CH02145	SSF53383	PLP-dependent transferases
RHE_CH02146	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RHE_CH02147	SSF53720	ALDH-like
RHE_CH02148	SSF141868	EAL domain-like
RHE_CH02148	SSF55073	Nucleotide cyclase
RHE_CH02150	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH02151	SSF50182	Sm-like ribonucleoproteins
RHE_CH02151	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
RHE_CH02151	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
RHE_CH02155	SSF56281	Metallo-hydrolase/oxidoreductase
RHE_CH02156	SSF51556	Metallo-dependent hydrolases
RHE_CH02157	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RHE_CH02157	SSF52374	Nucleotidylyl transferase
RHE_CH02159	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02160	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02161	SSF56601	beta-lactamase/transpeptidase-like
RHE_CH02161	SSF69189	Penicillin-binding protein associated domain
RHE_CH02162	SSF50685	Barwin-like endoglucanases
RHE_CH02165	SSF46689	Homeodomain-like
RHE_CH02165	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_CH02167	SSF82057	Prokaryotic SH3-related domain
RHE_CH02168	SSF54001	Cysteine proteinases
RHE_CH02169	SSF54001	Cysteine proteinases
RHE_CH02173	SSF109998	Triger factor/SurA peptide-binding domain-like
RHE_CH02174	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
RHE_CH02174	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
RHE_CH02175	SSF51366	Ribulose-phoshate binding barrel
RHE_CH02176	SSF55040	Molybdenum cofactor biosynthesis protein C, MoaC
RHE_CH02177	SSF53218	Molybdenum cofactor biosynthesis proteins
RHE_CH02177	SSF63867	MoeA C-terminal domain-like
RHE_CH02177	SSF63882	MoeA N-terminal region -like
RHE_CH02178	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH02179	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02180	SSF55073	Nucleotide cyclase
RHE_CH02182	SSF48256	Citrate synthase
RHE_CH02184	SSF52317	Class I glutamine amidotransferase-like
RHE_CH02184	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02186	SSF51351	Triosephosphate isomerase (TIM)
RHE_CH02187	SSF53474	alpha/beta-Hydrolases
RHE_CH02188	SSF54211	Ribosomal protein S5 domain 2-like
RHE_CH02188	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH02188	SSF56719	Type II DNA topoisomerase
RHE_CH02190	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH02193	SSF50475	FMN-binding split barrel
RHE_CH02194	SSF55469	FMN-dependent nitroreductase-like
RHE_CH02196	SSF52954	Class II aaRS ABD-related
RHE_CH02196	SSF55186	ThrRS/AlaRS common domain
RHE_CH02196	SSF55681	Class II aaRS and biotin synthetases
RHE_CH02196	SSF81271	TGS-like
RHE_CH02197	SSF160379	SP0830-like
RHE_CH02200	SSF82649	SufE/NifU
RHE_CH02201	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RHE_CH02202	SSF141734	HisI-like
RHE_CH02203	SSF52151	FabD/lysophospholipase-like
RHE_CH02204	SSF54631	CBS-domain pair
RHE_CH02205	SSF144091	Rhomboid-like
RHE_CH02207	SSF141371	PilZ domain-like
RHE_CH02208	SSF53474	alpha/beta-Hydrolases
RHE_CH02211	SSF110997	Sporulation related repeat
RHE_CH02211	SSF56601	beta-lactamase/transpeptidase-like
RHE_CH02214	SSF143548	Serine metabolism enzymes domain
RHE_CH02217	SSF46955	Putative DNA-binding domain
RHE_CH02218	SSF158791	MgtE N-terminal domain-like
RHE_CH02218	SSF161093	MgtE membrane domain-like
RHE_CH02218	SSF54631	CBS-domain pair
RHE_CH02219	SSF56420	Peptide deformylase
RHE_CH02223	SSF55681	Class II aaRS and biotin synthetases
RHE_CH02224	SSF103481	Multidrug resistance efflux transporter EmrE
RHE_CH02226	SSF51230	Single hybrid motif
RHE_CH02226	SSF51246	Rudiment single hybrid motif
RHE_CH02226	SSF52440	PreATP-grasp domain
RHE_CH02226	SSF56059	Glutathione synthetase ATP-binding domain-like
RHE_CH02227	SSF50129	GroES-like
RHE_CH02227	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02228	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH02230	SSF103481	Multidrug resistance efflux transporter EmrE
RHE_CH02232	SSF52096	ClpP/crotonase
RHE_CH02234	SSF160909	ATP12-like
RHE_CH02235	SSF56784	HAD-like
RHE_CH02236	SSF55120	Pseudouridine synthase
RHE_CH02236	SSF55174	Alpha-L RNA-binding motif
RHE_CH02239	SSF110087	DR1885-like metal-binding protein
RHE_CH02241	SSF101790	Aminomethyltransferase beta-barrel domain
RHE_CH02241	SSF103025	Folate-binding domain
RHE_CH02242	SSF51230	Single hybrid motif
RHE_CH02243	SSF53383	PLP-dependent transferases
RHE_CH02244	SSF51445	(Trans)glycosidases
RHE_CH02247	SSF89360	HesB-like domain
RHE_CH02248	SSF117916	Fe-S cluster assembly (FSCA) domain-like
RHE_CH02249	SSF53383	PLP-dependent transferases
RHE_CH02250	SSF101960	Stabilizer of iron transporter SufD
RHE_CH02251	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02252	SSF82771	GIY-YIG endonuclease
RHE_CH02253	SSF101960	Stabilizer of iron transporter SufD
RHE_CH02254	SSF53383	PLP-dependent transferases
RHE_CH02255	SSF53474	alpha/beta-Hydrolases
RHE_CH02256	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH02257	SSF53067	Actin-like ATPase domain
RHE_CH02258	SSF52374	Nucleotidylyl transferase
RHE_CH02258	SSF55174	Alpha-L RNA-binding motif
RHE_CH02260	SSF51011	Glycosyl hydrolase domain
RHE_CH02260	SSF51445	(Trans)glycosidases
RHE_CH02262	SSF52833	Thioredoxin-like
RHE_CH02263	SSF47240	Ferritin-like
RHE_CH02264	SSF51261	Duplicated hybrid motif
RHE_CH02265	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02266	SSF55811	Nudix
RHE_CH02267	SSF159894	YgaC/TfoX-N like
RHE_CH02268	SSF50475	FMN-binding split barrel
RHE_CH02269	SSF53822	Periplasmic binding protein-like I
RHE_CH02270	SSF51366	Ribulose-phoshate binding barrel
RHE_CH02273	SSF48557	L-aspartase-like
RHE_CH02276	SSF53474	alpha/beta-Hydrolases
RHE_CH02277	SSF141868	EAL domain-like
RHE_CH02277	SSF55073	Nucleotide cyclase
RHE_CH02277	SSF55785	PYP-like sensor domain (PAS domain)
RHE_CH02278	SSF56104	SAICAR synthase-like
RHE_CH02279	SSF82697	PurS-like
RHE_CH02280	SSF56399	ADP-ribosylation
RHE_CH02281	SSF52317	Class I glutamine amidotransferase-like
RHE_CH02284	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02284	SSF53383	PLP-dependent transferases
RHE_CH02286	SSF55326	PurM N-terminal domain-like
RHE_CH02286	SSF56042	PurM C-terminal domain-like
RHE_CH02287	SSF82657	BolA-like
RHE_CH02288	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02288	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH02289	SSF52304	Type II 3-dehydroquinate dehydratase
RHE_CH02290	SSF55331	Tautomerase/MIF
RHE_CH02291	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02291	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RHE_CH02292	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02293	SSF53850	Periplasmic binding protein-like II
RHE_CH02294	SSF161098	MetI-like
RHE_CH02295	SSF161098	MetI-like
RHE_CH02296	SSF51658	Xylose isomerase-like
RHE_CH02297	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02297	SSF48008	GntR ligand-binding domain-like
RHE_CH02298	SSF49482	Aromatic compound dioxygenase
RHE_CH02299	SSF56529	FAH
RHE_CH02300	SSF51621	Phosphoenolpyruvate/pyruvate domain
RHE_CH02301	SSF53850	Periplasmic binding protein-like II
RHE_CH02304	SSF52833	Thioredoxin-like
RHE_CH02305	SSF103473	MFS general substrate transporter
RHE_CH02306	SSF103473	MFS general substrate transporter
RHE_CH02307	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH02308	SSF56655	Carbohydrate phosphatase
RHE_CH02309	SSF56655	Carbohydrate phosphatase
RHE_CH02310	SSF52402	Adenine nucleotide alpha hydrolases-like
RHE_CH02311	SSF56601	beta-lactamase/transpeptidase-like
RHE_CH02312	SSF55174	Alpha-L RNA-binding motif
RHE_CH02313	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02314	SSF53681	Aspartate/glutamate racemase
RHE_CH02315	SSF75217	alpha/beta knot
RHE_CH02319	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH02320	SSF47616	GST C-terminal domain-like
RHE_CH02320	SSF52833	Thioredoxin-like
RHE_CH02321	SSF46689	Homeodomain-like
RHE_CH02321	SSF55136	Probable bacterial effector-binding domain
RHE_CH02322	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
RHE_CH02322	SSF50447	Translation proteins
RHE_CH02322	SSF55186	ThrRS/AlaRS common domain
RHE_CH02322	SSF55681	Class II aaRS and biotin synthetases
RHE_CH02323	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02323	SSF54752	RecA protein, C-terminal domain
RHE_CH02324	SSF53613	Ribokinase-like
RHE_CH02325	SSF110581	Indigoidine synthase A-like
RHE_CH02326	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH02326	SSF52172	CheY-like
RHE_CH02326	SSF55785	PYP-like sensor domain (PAS domain)
RHE_CH02326	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH02329	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
RHE_CH02329	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RHE_CH02330	SSF53254	Phosphoglycerate mutase-like
RHE_CH02334	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
RHE_CH02335	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RHE_CH02336	SSF51717	Dihydropteroate synthetase-like
RHE_CH02338	SSF54292	2Fe-2S ferredoxin-like
RHE_CH02339	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RHE_CH02340	SSF58113	Apolipoprotein A-I
RHE_CH02341	SSF52499	Isochorismatase-like hydrolases
RHE_CH02342	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02344	SSF56601	beta-lactamase/transpeptidase-like
RHE_CH02345	SSF55073	Nucleotide cyclase
RHE_CH02345	SSF55781	GAF domain-like
RHE_CH02346	SSF159594	XCC0632-like
RHE_CH02347	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RHE_CH02348	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02349	SSF52091	SpoIIaa-like
RHE_CH02350	SSF51604	Enolase C-terminal domain-like
RHE_CH02350	SSF54826	Enolase N-terminal domain-like
RHE_CH02351	SSF103473	MFS general substrate transporter
RHE_CH02352	SSF56300	Metallo-dependent phosphatases
RHE_CH02353	SSF53254	Phosphoglycerate mutase-like
RHE_CH02354	SSF56176	FAD-binding/transporter-associated domain-like
RHE_CH02355	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02355	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RHE_CH02355	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RHE_CH02356	SSF46689	Homeodomain-like
RHE_CH02357	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02357	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH02358	SSF51658	Xylose isomerase-like
RHE_CH02359	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02361	SSF53822	Periplasmic binding protein-like I
RHE_CH02362	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH02362	SSF53822	Periplasmic binding protein-like I
RHE_CH02363	SSF53098	Ribonuclease H-like
RHE_CH02364	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH02365	SSF48452	TPR-like
RHE_CH02365	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RHE_CH02365	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RHE_CH02366	SSF54909	Dimeric alpha+beta barrel
RHE_CH02368	SSF55469	FMN-dependent nitroreductase-like
RHE_CH02369	SSF51569	Aldolase
RHE_CH02370	SSF82171	DPP6 N-terminal domain-like
RHE_CH02371	SSF52402	Adenine nucleotide alpha hydrolases-like
RHE_CH02371	SSF56317	Carbon-nitrogen hydrolase
RHE_CH02373	SSF51316	Mss4-like
RHE_CH02374	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02374	SSF90123	ABC transporter transmembrane region
RHE_CH02375	SSF51569	Aldolase
RHE_CH02376	SSF53300	vWA-like
RHE_CH02377	SSF51905	FAD/NAD(P)-binding domain
RHE_CH02377	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RHE_CH02378	SSF54975	Acylphosphatase/BLUF domain-like
RHE_CH02380	SSF100950	NagB/RpiA/CoA transferase-like
RHE_CH02380	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
RHE_CH02381	SSF56784	HAD-like
RHE_CH02382	SSF141523	L,D-transpeptidase catalytic domain-like
RHE_CH02382	SSF47090	PGBD-like
RHE_CH02383	SSF48557	L-aspartase-like
RHE_CH02385	SSF117457	FumA C-terminal domain-like
RHE_CH02386	SSF55073	Nucleotide cyclase
RHE_CH02387	SSF50475	FMN-binding split barrel
RHE_CH02388	SSF53474	alpha/beta-Hydrolases
RHE_CH02389	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02392	SSF102114	Radical SAM enzymes
RHE_CH02394	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02395	SSF100950	NagB/RpiA/CoA transferase-like
RHE_CH02395	SSF46689	Homeodomain-like
RHE_CH02396	SSF53067	Actin-like ATPase domain
RHE_CH02397	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RHE_CH02397	SSF52922	TK C-terminal domain-like
RHE_CH02398	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RHE_CH02400	SSF53822	Periplasmic binding protein-like I
RHE_CH02401	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02402	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02403	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02404	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02405	SSF103481	Multidrug resistance efflux transporter EmrE
RHE_CH02406	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH02407	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02410	SSF47616	GST C-terminal domain-like
RHE_CH02410	SSF52833	Thioredoxin-like
RHE_CH02411	SSF82784	OsmC-like
RHE_CH02412	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH02412	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH02413	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_CH02413	SSF52172	CheY-like
RHE_CH02414	SSF53474	alpha/beta-Hydrolases
RHE_CH02415	SSF52833	Thioredoxin-like
RHE_CH02416	SSF53474	alpha/beta-Hydrolases
RHE_CH02417	SSF103088	OmpA-like
RHE_CH02418	SSF53850	Periplasmic binding protein-like II
RHE_CH02419	SSF161098	MetI-like
RHE_CH02420	SSF161098	MetI-like
RHE_CH02423	SSF48452	TPR-like
RHE_CH02423	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH02424	SSF47616	GST C-terminal domain-like
RHE_CH02424	SSF52833	Thioredoxin-like
RHE_CH02425	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02426	SSF55961	Bet v1-like
RHE_CH02427	SSF159888	YdhG-like
RHE_CH02428	SSF159888	YdhG-like
RHE_CH02430	SSF55961	Bet v1-like
RHE_CH02431	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02432	SSF51679	Bacterial luciferase-like
RHE_CH02433	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RHE_CH02433	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02434	SSF48371	ARM repeat
RHE_CH02435	SSF54631	CBS-domain pair
RHE_CH02437	SSF56935	Porins
RHE_CH02438	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02438	SSF54909	Dimeric alpha+beta barrel
RHE_CH02439	SSF52141	Uracil-DNA glycosylase-like
RHE_CH02440	SSF50199	Staphylococcal nuclease
RHE_CH02441	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH02441	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH02443	SSF52733	Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
RHE_CH02446	SSF50630	Acid proteases
RHE_CH02447	SSF103473	MFS general substrate transporter
RHE_CH02449	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02449	SSF53850	Periplasmic binding protein-like II
RHE_CH02450	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02452	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02453	SSF49899	Concanavalin A-like lectins/glucanases
RHE_CH02453	SSF75005	Arabinanase/levansucrase/invertase
RHE_CH02454	SSF51430	NAD(P)-linked oxidoreductase
RHE_CH02455	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02455	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH02456	SSF51658	Xylose isomerase-like
RHE_CH02457	SSF49303	beta-Galactosidase/glucuronidase domain
RHE_CH02457	SSF49785	Galactose-binding domain-like
RHE_CH02457	SSF51445	(Trans)glycosidases
RHE_CH02458	SSF50331	MOP-like
RHE_CH02458	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02459	SSF161098	MetI-like
RHE_CH02460	SSF161098	MetI-like
RHE_CH02461	SSF53850	Periplasmic binding protein-like II
RHE_CH02462	SSF53822	Periplasmic binding protein-like I
RHE_CH02464	SSF52440	PreATP-grasp domain
RHE_CH02464	SSF56059	Glutathione synthetase ATP-binding domain-like
RHE_CH02465	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02466	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH02467	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH02468	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RHE_CH02468	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02470	SSF55961	Bet v1-like
RHE_CH02471	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH02472	SSF55785	PYP-like sensor domain (PAS domain)
RHE_CH02474	SSF50129	GroES-like
RHE_CH02474	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02475	SSF53901	Thiolase-like
RHE_CH02476	SSF53901	Thiolase-like
RHE_CH02477	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RHE_CH02478	SSF47336	ACP-like
RHE_CH02479	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02479	SSF51206	cAMP-binding domain-like
RHE_CH02480	SSF141523	L,D-transpeptidase catalytic domain-like
RHE_CH02482	SSF53383	PLP-dependent transferases
RHE_CH02483	SSF52317	Class I glutamine amidotransferase-like
RHE_CH02483	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02484	SSF53790	Tetrapyrrole methylase
RHE_CH02485	SSF53590	Nucleoside hydrolase
RHE_CH02486	SSF159664	CobE/GbiG C-terminal domain-like
RHE_CH02488	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02490	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02490	SSF90002	Hypothetical protein YjiA, C-terminal domain
RHE_CH02491	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02492	SSF54631	CBS-domain pair
RHE_CH02492	SSF81340	Clc chloride channel
RHE_CH02493	SSF55073	Nucleotide cyclase
RHE_CH02494	SSF52317	Class I glutamine amidotransferase-like
RHE_CH02494	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02495	SSF53850	Periplasmic binding protein-like II
RHE_CH02498	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02498	SSF53850	Periplasmic binding protein-like II
RHE_CH02500	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02500	SSF53850	Periplasmic binding protein-like II
RHE_CH02501	SSF54534	FKBP-like
RHE_CH02506	SSF111369	HlyD-like secretion proteins
RHE_CH02507	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RHE_CH02507	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RHE_CH02507	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RHE_CH02511	SSF47175	Cytochromes
RHE_CH02514	SSF81342	Transmembrane di-heme cytochromes
RHE_CH02518	SSF56954	Outer membrane efflux proteins (OEP)
RHE_CH02519	SSF49503	Cupredoxins
RHE_CH02520	SSF49503	Cupredoxins
RHE_CH02525	SSF46689	Homeodomain-like
RHE_CH02525	SSF52317	Class I glutamine amidotransferase-like
RHE_CH02526	SSF52172	CheY-like
RHE_CH02526	SSF55073	Nucleotide cyclase
RHE_CH02527	SSF52172	CheY-like
RHE_CH02529	SSF48239	Terpenoid cyclases/Protein prenyltransferases
RHE_CH02531	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02532	SSF52788	Phosphotyrosine protein phosphatases I
RHE_CH02533	SSF81338	Aquaporin-like
RHE_CH02534	SSF52833	Thioredoxin-like
RHE_CH02535	SSF52218	Flavoproteins
RHE_CH02537	SSF50182	Sm-like ribonucleoproteins
RHE_CH02537	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
RHE_CH02537	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
RHE_CH02538	SSF48452	TPR-like
RHE_CH02539	SSF52172	CheY-like
RHE_CH02539	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH02540	SSF103473	MFS general substrate transporter
RHE_CH02541	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02542	SSF55811	Nudix
RHE_CH02544	SSF82784	OsmC-like
RHE_CH02545	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH02547	SSF158472	HAMP domain-like
RHE_CH02547	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RHE_CH02548	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RHE_CH02552	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH02553	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02554	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02554	SSF53850	Periplasmic binding protein-like II
RHE_CH02556	SSF52172	CheY-like
RHE_CH02557	SSF56770	HydA/Nqo6-like
RHE_CH02559	SSF52833	Thioredoxin-like
RHE_CH02560	SSF55073	Nucleotide cyclase
RHE_CH02563	SSF46600	C-terminal UvrC-binding domain of UvrB
RHE_CH02563	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02565	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH02566	SSF143081	BB1717-like
RHE_CH02568	SSF50249	Nucleic acid-binding proteins
RHE_CH02569	SSF51395	FMN-linked oxidoreductases
RHE_CH02570	SSF50156	PDZ domain-like
RHE_CH02570	SSF50494	Trypsin-like serine proteases
RHE_CH02571	SSF53474	alpha/beta-Hydrolases
RHE_CH02576	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH02576	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH02577	SSF52172	CheY-like
RHE_CH02578	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02579	SSF53597	Dihydrofolate reductase-like
RHE_CH02582	SSF46689	Homeodomain-like
RHE_CH02583	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH02586	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02587	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02590	SSF51316	Mss4-like
RHE_CH02591	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH02593	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02593	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH02594	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02595	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH02597	SSF46689	Homeodomain-like
RHE_CH02597	SSF51215	Regulatory protein AraC
RHE_CH02598	SSF51197	Clavaminate synthase-like
RHE_CH02599	SSF53383	PLP-dependent transferases
RHE_CH02604	SSF49482	Aromatic compound dioxygenase
RHE_CH02605	SSF51126	Pectin lyase-like
RHE_CH02606	SSF51126	Pectin lyase-like
RHE_CH02609	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02610	SSF111369	HlyD-like secretion proteins
RHE_CH02611	SSF46689	Homeodomain-like
RHE_CH02612	SSF53474	alpha/beta-Hydrolases
RHE_CH02614	SSF81452	Cytochrome c oxidase subunit III-like
RHE_CH02615	SSF81452	Cytochrome c oxidase subunit III-like
RHE_CH02616	SSF81442	Cytochrome c oxidase subunit I-like
RHE_CH02617	SSF49503	Cupredoxins
RHE_CH02617	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
RHE_CH02618	SSF46626	Cytochrome c
RHE_CH02621	SSF52799	(Phosphotyrosine protein) phosphatases II
RHE_CH02621	SSF56281	Metallo-hydrolase/oxidoreductase
RHE_CH02623	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH02624	SSF55144	LigT-like
RHE_CH02626	SSF52490	Tubulin nucleotide-binding domain-like
RHE_CH02626	SSF55307	Tubulin C-terminal domain-like
RHE_CH02627	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH02628	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02636	SSF55961	Bet v1-like
RHE_CH02637	SSF51316	Mss4-like
RHE_CH02638	SSF52317	Class I glutamine amidotransferase-like
RHE_CH02639	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH02639	SSF53822	Periplasmic binding protein-like I
RHE_CH02641	SSF50022	ISP domain
RHE_CH02642	SSF53822	Periplasmic binding protein-like I
RHE_CH02643	SSF51905	FAD/NAD(P)-binding domain
RHE_CH02643	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RHE_CH02644	SSF51658	Xylose isomerase-like
RHE_CH02645	SSF141868	EAL domain-like
RHE_CH02645	SSF55073	Nucleotide cyclase
RHE_CH02647	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH02648	SSF158472	HAMP domain-like
RHE_CH02648	SSF81606	PP2C-like
RHE_CH02650	SSF52091	SpoIIaa-like
RHE_CH02651	SSF52266	SGNH hydrolase
RHE_CH02656	SSF51445	(Trans)glycosidases
RHE_CH02656	SSF52317	Class I glutamine amidotransferase-like
RHE_CH02657	SSF50331	MOP-like
RHE_CH02657	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02658	SSF161098	MetI-like
RHE_CH02659	SSF161098	MetI-like
RHE_CH02660	SSF53850	Periplasmic binding protein-like II
RHE_CH02661	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02661	SSF53067	Actin-like ATPase domain
RHE_CH02663	SSF51182	RmlC-like cupins
RHE_CH02665	SSF103481	Multidrug resistance efflux transporter EmrE
RHE_CH02666	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02666	SSF53383	PLP-dependent transferases
RHE_CH02667	SSF52172	CheY-like
RHE_CH02668	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH02668	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH02669	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH02670	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase
RHE_CH02671	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02672	SSF52833	Thioredoxin-like
RHE_CH02674	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02675	SSF51679	Bacterial luciferase-like
RHE_CH02676	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02676	SSF53850	Periplasmic binding protein-like II
RHE_CH02677	SSF103473	MFS general substrate transporter
RHE_CH02678	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02679	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH02680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02681	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RHE_CH02682	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RHE_CH02683	SSF53807	"Helical backbone" metal receptor
RHE_CH02684	SSF55073	Nucleotide cyclase
RHE_CH02687	SSF55961	Bet v1-like
RHE_CH02688	SSF52121	Lumazine synthase
RHE_CH02689	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH02690	SSF53300	vWA-like
RHE_CH02691	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02691	SSF53850	Periplasmic binding protein-like II
RHE_CH02692	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02693	SSF55298	YjgF-like
RHE_CH02695	SSF48452	TPR-like
RHE_CH02695	SSF56935	Porins
RHE_CH02696	SSF55073	Nucleotide cyclase
RHE_CH02697	SSF46689	Homeodomain-like
RHE_CH02697	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_CH02699	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02700	SSF81301	Nucleotidyltransferase
RHE_CH02701	SSF56529	FAH
RHE_CH02702	SSF51161	Trimeric LpxA-like enzymes
RHE_CH02706	SSF54427	NTF2-like
RHE_CH02709	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02710	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RHE_CH02711	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02712	SSF53807	"Helical backbone" metal receptor
RHE_CH02713	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02714	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH02715	SSF54631	CBS-domain pair
RHE_CH02715	SSF56176	FAD-binding/transporter-associated domain-like
RHE_CH02717	SSF52821	Rhodanese/Cell cycle control phosphatase
RHE_CH02720	SSF54506	Diaminopimelate epimerase-like
RHE_CH02721	SSF55811	Nudix
RHE_CH02722	SSF56219	DNase I-like
RHE_CH02723	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02724	SSF161098	MetI-like
RHE_CH02725	SSF53850	Periplasmic binding protein-like II
RHE_CH02726	SSF53474	alpha/beta-Hydrolases
RHE_CH02727	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02728	SSF51430	NAD(P)-linked oxidoreductase
RHE_CH02729	SSF53383	PLP-dependent transferases
RHE_CH02730	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
RHE_CH02731	SSF47598	Ribbon-helix-helix
RHE_CH02733	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH02735	SSF50952	Soluble quinoprotein glucose dehydrogenase
RHE_CH02737	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH02738	SSF56112	Protein kinase-like (PK-like)
RHE_CH02739	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02739	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH02740	SSF53254	Phosphoglycerate mutase-like
RHE_CH02741	SSF51445	(Trans)glycosidases
RHE_CH02744	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RHE_CH02744	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02745	SSF46689	Homeodomain-like
RHE_CH02745	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_CH02747	SSF53067	Actin-like ATPase domain
RHE_CH02748	SSF56784	HAD-like
RHE_CH02749	SSF51695	PLC-like phosphodiesterases
RHE_CH02750	SSF161098	MetI-like
RHE_CH02751	SSF161098	MetI-like
RHE_CH02752	SSF53850	Periplasmic binding protein-like II
RHE_CH02753	SSF50331	MOP-like
RHE_CH02753	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02754	SSF100950	NagB/RpiA/CoA transferase-like
RHE_CH02754	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RHE_CH02756	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH02757	SSF46689	Homeodomain-like
RHE_CH02758	SSF50129	GroES-like
RHE_CH02758	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02760	SSF51905	FAD/NAD(P)-binding domain
RHE_CH02762	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02762	SSF54909	Dimeric alpha+beta barrel
RHE_CH02763	SSF53681	Aspartate/glutamate racemase
RHE_CH02764	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02764	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH02765	SSF46689	Homeodomain-like
RHE_CH02765	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_CH02766	SSF103473	MFS general substrate transporter
RHE_CH02767	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02768	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02769	SSF63892	Pyridoxine 5'-phosphate synthase
RHE_CH02770	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_CH02770	SSF46955	Putative DNA-binding domain
RHE_CH02771	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02772	SSF53850	Periplasmic binding protein-like II
RHE_CH02773	SSF69118	AhpD-like
RHE_CH02774	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02775	SSF51182	RmlC-like cupins
RHE_CH02776	SSF50182	Sm-like ribonucleoproteins
RHE_CH02776	SSF51206	cAMP-binding domain-like
RHE_CH02776	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
RHE_CH02777	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02779	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RHE_CH02779	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RHE_CH02781	SSF50090	Electron transport accessory proteins
RHE_CH02782	SSF50090	Electron transport accessory proteins
RHE_CH02783	SSF56209	Nitrile hydratase alpha chain
RHE_CH02785	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02788	SSF51430	NAD(P)-linked oxidoreductase
RHE_CH02789	SSF55021	ACT-like
RHE_CH02790	SSF52467	DHS-like NAD/FAD-binding domain
RHE_CH02790	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RHE_CH02791	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02792	SSF51569	Aldolase
RHE_CH02793	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02794	SSF56784	HAD-like
RHE_CH02795	SSF50156	PDZ domain-like
RHE_CH02795	SSF50494	Trypsin-like serine proteases
RHE_CH02796	SSF117892	Band 7/SPFH domain
RHE_CH02797	SSF117892	Band 7/SPFH domain
RHE_CH02798	SSF53597	Dihydrofolate reductase-like
RHE_CH02799	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
RHE_CH02800	SSF101738	SspB-like
RHE_CH02804	SSF55103	FAD-linked oxidases, C-terminal domain
RHE_CH02804	SSF56176	FAD-binding/transporter-associated domain-like
RHE_CH02805	SSF51430	NAD(P)-linked oxidoreductase
RHE_CH02806	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02806	SSF53850	Periplasmic binding protein-like II
RHE_CH02808	SSF46689	Homeodomain-like
RHE_CH02808	SSF51215	Regulatory protein AraC
RHE_CH02809	SSF102462	Peptidyl-tRNA hydrolase II
RHE_CH02810	SSF103088	OmpA-like
RHE_CH02811	SSF64518	Phase 1 flagellin
RHE_CH02812	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RHE_CH02812	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RHE_CH02812	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RHE_CH02813	SSF111369	HlyD-like secretion proteins
RHE_CH02814	SSF55073	Nucleotide cyclase
RHE_CH02817	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02818	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH02819	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02821	SSF52499	Isochorismatase-like hydrolases
RHE_CH02822	SSF53597	Dihydrofolate reductase-like
RHE_CH02827	SSF53092	Creatinase/prolidase N-terminal domain
RHE_CH02827	SSF55920	Creatinase/aminopeptidase
RHE_CH02828	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH02829	SSF52833	Thioredoxin-like
RHE_CH02830	SSF158472	HAMP domain-like
RHE_CH02830	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RHE_CH02831	SSF50341	CheW-like
RHE_CH02833	SSF53098	Ribonuclease H-like
RHE_CH02834	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH02835	SSF47781	RuvA domain 2-like
RHE_CH02835	SSF50249	Nucleic acid-binding proteins
RHE_CH02835	SSF52113	BRCT domain
RHE_CH02835	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
RHE_CH02837	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02838	SSF48452	TPR-like
RHE_CH02839	SSF54211	Ribosomal protein S5 domain 2-like
RHE_CH02840	SSF52490	Tubulin nucleotide-binding domain-like
RHE_CH02840	SSF55307	Tubulin C-terminal domain-like
RHE_CH02841	SSF53067	Actin-like ATPase domain
RHE_CH02843	SSF52440	PreATP-grasp domain
RHE_CH02843	SSF56059	Glutathione synthetase ATP-binding domain-like
RHE_CH02844	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02845	SSF56176	FAD-binding/transporter-associated domain-like
RHE_CH02845	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
RHE_CH02846	SSF51984	MurCD N-terminal domain
RHE_CH02846	SSF53244	MurD-like peptide ligases, peptide-binding domain
RHE_CH02846	SSF53623	MurD-like peptide ligases, catalytic domain
RHE_CH02847	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RHE_CH02849	SSF51984	MurCD N-terminal domain
RHE_CH02849	SSF53244	MurD-like peptide ligases, peptide-binding domain
RHE_CH02849	SSF53623	MurD-like peptide ligases, catalytic domain
RHE_CH02851	SSF53244	MurD-like peptide ligases, peptide-binding domain
RHE_CH02851	SSF53623	MurD-like peptide ligases, catalytic domain
RHE_CH02851	SSF63418	MurE/MurF N-terminal domain
RHE_CH02852	SSF53244	MurD-like peptide ligases, peptide-binding domain
RHE_CH02852	SSF53623	MurD-like peptide ligases, catalytic domain
RHE_CH02852	SSF63418	MurE/MurF N-terminal domain
RHE_CH02853	SSF56519	Penicillin binding protein dimerisation domain
RHE_CH02853	SSF56601	beta-lactamase/transpeptidase-like
RHE_CH02855	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH02855	SSF81799	Putative methyltransferase TM0872, insert domain
RHE_CH02856	SSF89447	AbrB/MazE/MraZ-like
RHE_CH02857	SSF51905	FAD/NAD(P)-binding domain
RHE_CH02857	SSF54373	FAD-linked reductases, C-terminal domain
RHE_CH02858	SSF51905	FAD/NAD(P)-binding domain
RHE_CH02858	SSF54373	FAD-linked reductases, C-terminal domain
RHE_CH02859	SSF53955	Lysozyme-like
RHE_CH02860	SSF47090	PGBD-like
RHE_CH02860	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
RHE_CH02861	SSF158682	TerB-like
RHE_CH02861	SSF46565	Chaperone J-domain
RHE_CH02862	SSF53784	Phosphofructokinase
RHE_CH02864	SSF53955	Lysozyme-like
RHE_CH02865	SSF56601	beta-lactamase/transpeptidase-like
RHE_CH02866	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH02867	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH02870	SSF103481	Multidrug resistance efflux transporter EmrE
RHE_CH02871	SSF51730	FAD-linked oxidoreductase
RHE_CH02872	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02872	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH02873	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02874	SSF55895	Ribonuclease Rh-like
RHE_CH02875	SSF53474	alpha/beta-Hydrolases
RHE_CH02876	SSF103481	Multidrug resistance efflux transporter EmrE
RHE_CH02877	SSF89796	CoA-transferase family III (CaiB/BaiF)
RHE_CH02878	SSF52467	DHS-like NAD/FAD-binding domain
RHE_CH02878	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RHE_CH02879	SSF55298	YjgF-like
RHE_CH02880	SSF52799	(Phosphotyrosine protein) phosphatases II
RHE_CH02881	SSF74650	Galactose mutarotase-like
RHE_CH02882	SSF141523	L,D-transpeptidase catalytic domain-like
RHE_CH02883	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02884	SSF56796	Dehydroquinate synthase-like
RHE_CH02885	SSF53720	ALDH-like
RHE_CH02886	SSF54368	Glutamine synthetase, N-terminal domain
RHE_CH02886	SSF55931	Glutamine synthetase/guanido kinase
RHE_CH02888	SSF53187	Zn-dependent exopeptidases
RHE_CH02889	SSF46689	Homeodomain-like
RHE_CH02889	SSF53697	SIS domain
RHE_CH02890	SSF53850	Periplasmic binding protein-like II
RHE_CH02891	SSF161098	MetI-like
RHE_CH02892	SSF161098	MetI-like
RHE_CH02893	SSF50331	MOP-like
RHE_CH02893	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02894	SSF50331	MOP-like
RHE_CH02894	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02895	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02895	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH02896	SSF161098	MetI-like
RHE_CH02897	SSF161098	MetI-like
RHE_CH02898	SSF53850	Periplasmic binding protein-like II
RHE_CH02899	SSF53067	Actin-like ATPase domain
RHE_CH02900	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02900	SSF64288	Chorismate lyase-like
RHE_CH02901	SSF47644	Methionine synthase domain
RHE_CH02901	SSF51717	Dihydropteroate synthetase-like
RHE_CH02901	SSF52242	Cobalamin (vitamin B12)-binding domain
RHE_CH02901	SSF56507	Methionine synthase activation domain-like
RHE_CH02901	SSF82282	Homocysteine S-methyltransferase
RHE_CH02902	SSF48208	Six-hairpin glycosidases
RHE_CH02903	SSF143744	GlcG-like
RHE_CH02904	SSF50475	FMN-binding split barrel
RHE_CH02906	SSF161098	MetI-like
RHE_CH02907	SSF161098	MetI-like
RHE_CH02908	SSF53850	Periplasmic binding protein-like II
RHE_CH02909	SSF50331	MOP-like
RHE_CH02909	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02910	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02910	SSF48008	GntR ligand-binding domain-like
RHE_CH02915	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_CH02915	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
RHE_CH02916	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH02917	SSF52172	CheY-like
RHE_CH02919	SSF56349	DNA breaking-rejoining enzymes
RHE_CH02920	SSF46955	Putative DNA-binding domain
RHE_CH02927	SSF52096	ClpP/crotonase
RHE_CH02929	SSF46955	Putative DNA-binding domain
RHE_CH02933	SSF56925	OMPA-like
RHE_CH02938	SSF111038	YjbQ-like
RHE_CH02940	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02940	SSF51206	cAMP-binding domain-like
RHE_CH02944	SSF56037	PheT/TilS domain
RHE_CH02945	SSF103481	Multidrug resistance efflux transporter EmrE
RHE_CH02946	SSF46689	Homeodomain-like
RHE_CH02946	SSF51215	Regulatory protein AraC
RHE_CH02947	SSF56112	Protein kinase-like (PK-like)
RHE_CH02950	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RHE_CH02950	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RHE_CH02951	SSF50129	GroES-like
RHE_CH02951	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02952	SSF53383	PLP-dependent transferases
RHE_CH02953	SSF47819	HRDC-like
RHE_CH02953	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02954	SSF56731	DNA primase core
RHE_CH02954	SSF57783	Zinc beta-ribbon
RHE_CH02956	SSF89095	GatB/YqeY motif
RHE_CH02957	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
RHE_CH02957	SSF52317	Class I glutamine amidotransferase-like
RHE_CH02958	SSF56524	Oxidoreductase molybdopterin-binding domain
RHE_CH02958	SSF81296	E set domains
RHE_CH02959	SSF158472	HAMP domain-like
RHE_CH02959	SSF55073	Nucleotide cyclase
RHE_CH02959	SSF55785	PYP-like sensor domain (PAS domain)
RHE_CH02960	SSF53822	Periplasmic binding protein-like I
RHE_CH02961	SSF54909	Dimeric alpha+beta barrel
RHE_CH02963	SSF103473	MFS general substrate transporter
RHE_CH02964	SSF55486	Metalloproteases ("zincins"), catalytic domain
RHE_CH02965	SSF50129	GroES-like
RHE_CH02965	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02966	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
RHE_CH02966	SSF52335	Methylglyoxal synthase-like
RHE_CH02966	SSF52440	PreATP-grasp domain
RHE_CH02966	SSF56059	Glutathione synthetase ATP-binding domain-like
RHE_CH02967	SSF52141	Uracil-DNA glycosylase-like
RHE_CH02968	SSF102114	Radical SAM enzymes
RHE_CH02968	SSF47781	RuvA domain 2-like
RHE_CH02969	SSF46557	GreA transcript cleavage protein, N-terminal domain
RHE_CH02969	SSF54534	FKBP-like
RHE_CH02970	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RHE_CH02971	SSF118215	Proton glutamate symport protein
RHE_CH02972	SSF103190	Sensory domain-like
RHE_CH02972	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH02972	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH02973	SSF46689	Homeodomain-like
RHE_CH02973	SSF52172	CheY-like
RHE_CH02973	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02974	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02974	SSF54909	Dimeric alpha+beta barrel
RHE_CH02975	SSF51905	FAD/NAD(P)-binding domain
RHE_CH02976	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02976	SSF53850	Periplasmic binding protein-like II
RHE_CH02977	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02978	SSF103473	MFS general substrate transporter
RHE_CH02979	SSF51395	FMN-linked oxidoreductases
RHE_CH02980	SSF56112	Protein kinase-like (PK-like)
RHE_CH02981	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH02981	SSF53822	Periplasmic binding protein-like I
RHE_CH02982	SSF53850	Periplasmic binding protein-like II
RHE_CH02983	SSF160964	MalF N-terminal region-like
RHE_CH02983	SSF161098	MetI-like
RHE_CH02984	SSF161098	MetI-like
RHE_CH02986	SSF50331	MOP-like
RHE_CH02986	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02987	SSF50331	MOP-like
RHE_CH02987	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH02988	SSF101473	DhaL-like
RHE_CH02988	SSF82549	DAK1/DegV-like
RHE_CH02989	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH02990	SSF46785	"Winged helix" DNA-binding domain
RHE_CH02990	SSF53850	Periplasmic binding protein-like II
RHE_CH02991	SSF81301	Nucleotidyltransferase
RHE_CH02994	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH02996	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH02997	SSF88723	PIN domain-like
RHE_CH02998	SSF53383	PLP-dependent transferases
RHE_CH03000	SSF53300	vWA-like
RHE_CH03001	SSF63817	Sortase
RHE_CH03002	SSF50952	Soluble quinoprotein glucose dehydrogenase
RHE_CH03004	SSF103481	Multidrug resistance efflux transporter EmrE
RHE_CH03007	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03008	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03009	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH03009	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH03010	SSF52172	CheY-like
RHE_CH03011	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03013	SSF56281	Metallo-hydrolase/oxidoreductase
RHE_CH03014	SSF50249	Nucleic acid-binding proteins
RHE_CH03015	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RHE_CH03015	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03019	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH03020	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
RHE_CH03021	SSF53092	Creatinase/prolidase N-terminal domain
RHE_CH03021	SSF55920	Creatinase/aminopeptidase
RHE_CH03023	SSF53271	PRTase-like
RHE_CH03025	SSF50715	Ribosomal protein L25-like
RHE_CH03026	SSF141868	EAL domain-like
RHE_CH03026	SSF158472	HAMP domain-like
RHE_CH03026	SSF55073	Nucleotide cyclase
RHE_CH03026	SSF55785	PYP-like sensor domain (PAS domain)
RHE_CH03027	SSF53850	Periplasmic binding protein-like II
RHE_CH03028	SSF53178	Peptidyl-tRNA hydrolase-like
RHE_CH03029	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH03030	SSF54736	ClpS-like
RHE_CH03031	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03031	SSF81271	TGS-like
RHE_CH03033	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RHE_CH03034	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RHE_CH03035	SSF53271	PRTase-like
RHE_CH03036	SSF46626	Cytochrome c
RHE_CH03037	SSF81342	Transmembrane di-heme cytochromes
RHE_CH03037	SSF81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
RHE_CH03038	SSF50022	ISP domain
RHE_CH03039	SSF56219	DNase I-like
RHE_CH03040	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03040	SSF90123	ABC transporter transmembrane region
RHE_CH03041	SSF47598	Ribbon-helix-helix
RHE_CH03042	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03042	SSF90123	ABC transporter transmembrane region
RHE_CH03043	SSF75217	alpha/beta knot
RHE_CH03044	SSF109755	PhoU-like
RHE_CH03046	SSF102886	Coproporphyrinogen III oxidase
RHE_CH03049	SSF81301	Nucleotidyltransferase
RHE_CH03049	SSF81891	Poly A polymerase C-terminal region-like
RHE_CH03050	SSF55811	Nudix
RHE_CH03052	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03054	SSF52317	Class I glutamine amidotransferase-like
RHE_CH03055	SSF52317	Class I glutamine amidotransferase-like
RHE_CH03058	SSF48295	TrpR-like
RHE_CH03059	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH03060	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH03061	SSF47616	GST C-terminal domain-like
RHE_CH03061	SSF52833	Thioredoxin-like
RHE_CH03062	SSF55811	Nudix
RHE_CH03063	SSF56300	Metallo-dependent phosphatases
RHE_CH03064	SSF48452	TPR-like
RHE_CH03065	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RHE_CH03065	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RHE_CH03067	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
RHE_CH03067	SSF51569	Aldolase
RHE_CH03067	SSF89000	post-HMGL domain-like
RHE_CH03069	SSF52096	ClpP/crotonase
RHE_CH03071	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RHE_CH03072	SSF160240	Cation efflux protein cytoplasmic domain-like
RHE_CH03072	SSF161111	Cation efflux protein transmembrane domain-like
RHE_CH03075	SSF52317	Class I glutamine amidotransferase-like
RHE_CH03075	SSF56322	ADC synthase
RHE_CH03076	SSF56935	Porins
RHE_CH03078	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03079	SSF52096	ClpP/crotonase
RHE_CH03080	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_CH03080	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
RHE_CH03084	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03084	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RHE_CH03085	SSF53850	Periplasmic binding protein-like II
RHE_CH03086	SSF161098	MetI-like
RHE_CH03087	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03088	SSF50475	FMN-binding split barrel
RHE_CH03089	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03090	SSF53383	PLP-dependent transferases
RHE_CH03091	SSF109604	HD-domain/PDEase-like
RHE_CH03093	SSF53822	Periplasmic binding protein-like I
RHE_CH03094	SSF51338	Composite domain of metallo-dependent hydrolases
RHE_CH03094	SSF51556	Metallo-dependent hydrolases
RHE_CH03095	SSF51011	Glycosyl hydrolase domain
RHE_CH03095	SSF51445	(Trans)glycosidases
RHE_CH03096	SSF53850	Periplasmic binding protein-like II
RHE_CH03097	SSF161098	MetI-like
RHE_CH03098	SSF161098	MetI-like
RHE_CH03099	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03100	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03102	SSF53613	Ribokinase-like
RHE_CH03104	SSF54368	Glutamine synthetase, N-terminal domain
RHE_CH03104	SSF55931	Glutamine synthetase/guanido kinase
RHE_CH03105	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RHE_CH03106	SSF53474	alpha/beta-Hydrolases
RHE_CH03107	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03108	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03109	SSF48452	TPR-like
RHE_CH03111	SSF88713	Glycoside hydrolase/deacetylase
RHE_CH03112	SSF90123	ABC transporter transmembrane region
RHE_CH03113	SSF103473	MFS general substrate transporter
RHE_CH03114	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03115	SSF50022	ISP domain
RHE_CH03115	SSF51905	FAD/NAD(P)-binding domain
RHE_CH03116	SSF55920	Creatinase/aminopeptidase
RHE_CH03117	SSF51679	Bacterial luciferase-like
RHE_CH03119	SSF55961	Bet v1-like
RHE_CH03120	SSF48452	TPR-like
RHE_CH03120	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RHE_CH03120	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RHE_CH03121	SSF54909	Dimeric alpha+beta barrel
RHE_CH03122	SSF53067	Actin-like ATPase domain
RHE_CH03123	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03124	SSF47741	CO dehydrogenase ISP C-domain like
RHE_CH03124	SSF54292	2Fe-2S ferredoxin-like
RHE_CH03124	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
RHE_CH03124	SSF56176	FAD-binding/transporter-associated domain-like
RHE_CH03125	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
RHE_CH03125	SSF56003	Molybdenum cofactor-binding domain
RHE_CH03127	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03127	SSF53850	Periplasmic binding protein-like II
RHE_CH03129	SSF46626	Cytochrome c
RHE_CH03130	SSF51338	Composite domain of metallo-dependent hydrolases
RHE_CH03130	SSF51556	Metallo-dependent hydrolases
RHE_CH03131	SSF51395	FMN-linked oxidoreductases
RHE_CH03133	SSF52799	(Phosphotyrosine protein) phosphatases II
RHE_CH03134	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH03134	SSF53474	alpha/beta-Hydrolases
RHE_CH03138	SSF117892	Band 7/SPFH domain
RHE_CH03139	SSF51182	RmlC-like cupins
RHE_CH03141	SSF158694	UraD-Like
RHE_CH03142	SSF88713	Glycoside hydrolase/deacetylase
RHE_CH03144	SSF51971	Nucleotide-binding domain
RHE_CH03144	SSF54373	FAD-linked reductases, C-terminal domain
RHE_CH03146	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH03146	SSF52172	CheY-like
RHE_CH03146	SSF55785	PYP-like sensor domain (PAS domain)
RHE_CH03146	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH03148	SSF103473	MFS general substrate transporter
RHE_CH03149	SSF51569	Aldolase
RHE_CH03150	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH03150	SSF53822	Periplasmic binding protein-like I
RHE_CH03151	SSF48371	ARM repeat
RHE_CH03152	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03153	SSF46689	Homeodomain-like
RHE_CH03153	SSF51215	Regulatory protein AraC
RHE_CH03154	SSF103473	MFS general substrate transporter
RHE_CH03155	SSF103481	Multidrug resistance efflux transporter EmrE
RHE_CH03156	SSF56059	Glutathione synthetase ATP-binding domain-like
RHE_CH03158	SSF54001	Cysteine proteinases
RHE_CH03159	SSF88723	PIN domain-like
RHE_CH03160	SSF143975	IlvD/EDD N-terminal domain-like
RHE_CH03160	SSF52016	LeuD/IlvD-like
RHE_CH03161	SSF53720	ALDH-like
RHE_CH03162	SSF56529	FAH
RHE_CH03164	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03165	SSF53822	Periplasmic binding protein-like I
RHE_CH03166	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03166	SSF53850	Periplasmic binding protein-like II
RHE_CH03168	SSF51294	Hedgehog/intein (Hint) domain
RHE_CH03170	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03170	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH03171	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03171	SSF53067	Actin-like ATPase domain
RHE_CH03172	SSF53822	Periplasmic binding protein-like I
RHE_CH03174	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03180	SSF51206	cAMP-binding domain-like
RHE_CH03180	SSF81324	Voltage-gated potassium channels
RHE_CH03182	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH03184	SSF55166	Hedgehog/DD-peptidase
RHE_CH03188	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH03190	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03191	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03192	SSF53822	Periplasmic binding protein-like I
RHE_CH03193	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03193	SSF53850	Periplasmic binding protein-like II
RHE_CH03194	SSF56601	beta-lactamase/transpeptidase-like
RHE_CH03195	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03196	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH03197	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH03197	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH03197	SSF88713	Glycoside hydrolase/deacetylase
RHE_CH03198	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH03199	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03199	SSF90123	ABC transporter transmembrane region
RHE_CH03200	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH03207	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_CH03207	SSF48452	TPR-like
RHE_CH03208	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH03209	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH03212	SSF51445	(Trans)glycosidases
RHE_CH03213	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RHE_CH03214	SSF51161	Trimeric LpxA-like enzymes
RHE_CH03218	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH03219	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH03220	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH03221	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH03222	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH03223	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH03225	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RHE_CH03226	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RHE_CH03227	SSF52266	SGNH hydrolase
RHE_CH03229	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03229	SSF90123	ABC transporter transmembrane region
RHE_CH03230	SSF51126	Pectin lyase-like
RHE_CH03233	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03238	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RHE_CH03238	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03238	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
RHE_CH03239	SSF56300	Metallo-dependent phosphatases
RHE_CH03240	SSF53474	alpha/beta-Hydrolases
RHE_CH03241	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH03242	SSF52141	Uracil-DNA glycosylase-like
RHE_CH03243	SSF53738	Phosphoglucomutase, first 3 domains
RHE_CH03243	SSF55957	Phosphoglucomutase, C-terminal domain
RHE_CH03244	SSF51182	RmlC-like cupins
RHE_CH03244	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH03246	SSF56219	DNase I-like
RHE_CH03247	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03249	SSF46689	Homeodomain-like
RHE_CH03249	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_CH03250	SSF111369	HlyD-like secretion proteins
RHE_CH03251	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03255	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03255	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH03256	SSF52317	Class I glutamine amidotransferase-like
RHE_CH03257	SSF103481	Multidrug resistance efflux transporter EmrE
RHE_CH03258	SSF46689	Homeodomain-like
RHE_CH03258	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_CH03259	SSF46458	Globin-like
RHE_CH03261	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH03262	SSF54909	Dimeric alpha+beta barrel
RHE_CH03265	SSF74653	TolA/TonB C-terminal domain
RHE_CH03268	SSF144064	Heme iron utilization protein-like
RHE_CH03269	SSF53807	"Helical backbone" metal receptor
RHE_CH03270	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RHE_CH03271	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03273	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RHE_CH03273	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RHE_CH03275	SSF52172	CheY-like
RHE_CH03275	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RHE_CH03277	SSF46548	alpha-helical ferredoxin
RHE_CH03277	SSF51971	Nucleotide-binding domain
RHE_CH03278	SSF51395	FMN-linked oxidoreductases
RHE_CH03278	SSF54862	4Fe-4S ferredoxins
RHE_CH03279	SSF51445	(Trans)glycosidases
RHE_CH03279	SSF81296	E set domains
RHE_CH03281	SSF51445	(Trans)glycosidases
RHE_CH03282	SSF51011	Glycosyl hydrolase domain
RHE_CH03282	SSF51445	(Trans)glycosidases
RHE_CH03283	SSF46689	Homeodomain-like
RHE_CH03283	SSF52317	Class I glutamine amidotransferase-like
RHE_CH03284	SSF52821	Rhodanese/Cell cycle control phosphatase
RHE_CH03285	SSF50129	GroES-like
RHE_CH03285	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03286	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03286	SSF53850	Periplasmic binding protein-like II
RHE_CH03288	SSF52172	CheY-like
RHE_CH03289	SSF46689	Homeodomain-like
RHE_CH03289	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_CH03290	SSF53187	Zn-dependent exopeptidases
RHE_CH03290	SSF55031	Bacterial exopeptidase dimerisation domain
RHE_CH03291	SSF52980	Restriction endonuclease-like
RHE_CH03292	SSF51338	Composite domain of metallo-dependent hydrolases
RHE_CH03292	SSF51556	Metallo-dependent hydrolases
RHE_CH03293	SSF51182	RmlC-like cupins
RHE_CH03294	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03295	SSF161098	MetI-like
RHE_CH03296	SSF161098	MetI-like
RHE_CH03297	SSF53850	Periplasmic binding protein-like II
RHE_CH03298	SSF111369	HlyD-like secretion proteins
RHE_CH03299	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RHE_CH03299	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RHE_CH03299	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RHE_CH03300	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03302	SSF69287	Urease metallochaperone UreE, N-terminal domain
RHE_CH03302	SSF69737	Urease metallochaperone UreE, C-terminal domain
RHE_CH03303	SSF55073	Nucleotide cyclase
RHE_CH03305	SSF51338	Composite domain of metallo-dependent hydrolases
RHE_CH03305	SSF51556	Metallo-dependent hydrolases
RHE_CH03308	SSF51278	Urease, beta-subunit
RHE_CH03310	SSF54111	Urease, gamma-subunit
RHE_CH03312	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03314	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03317	SSF53822	Periplasmic binding protein-like I
RHE_CH03318	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
RHE_CH03318	SSF51126	Pectin lyase-like
RHE_CH03320	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_CH03320	SSF52172	CheY-like
RHE_CH03321	SSF53822	Periplasmic binding protein-like I
RHE_CH03323	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03324	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03327	SSF56655	Carbohydrate phosphatase
RHE_CH03330	SSF48295	TrpR-like
RHE_CH03332	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH03334	SSF52172	CheY-like
RHE_CH03335	SSF52172	CheY-like
RHE_CH03339	SSF55315	L30e-like
RHE_CH03339	SSF75217	alpha/beta knot
RHE_CH03341	SSF55120	Pseudouridine synthase
RHE_CH03341	SSF55174	Alpha-L RNA-binding motif
RHE_CH03342	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RHE_CH03342	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RHE_CH03344	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03346	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH03347	SSF143975	IlvD/EDD N-terminal domain-like
RHE_CH03347	SSF52016	LeuD/IlvD-like
RHE_CH03348	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RHE_CH03348	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RHE_CH03348	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RHE_CH03349	SSF111369	HlyD-like secretion proteins
RHE_CH03350	SSF53474	alpha/beta-Hydrolases
RHE_CH03351	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03351	SSF53850	Periplasmic binding protein-like II
RHE_CH03352	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03353	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03353	SSF53850	Periplasmic binding protein-like II
RHE_CH03355	SSF50486	FMT C-terminal domain-like
RHE_CH03356	SSF103473	MFS general substrate transporter
RHE_CH03357	SSF111369	HlyD-like secretion proteins
RHE_CH03358	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03360	SSF111369	HlyD-like secretion proteins
RHE_CH03361	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RHE_CH03361	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RHE_CH03361	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RHE_CH03362	SSF56300	Metallo-dependent phosphatases
RHE_CH03363	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RHE_CH03363	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RHE_CH03364	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03365	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03366	SSF51658	Xylose isomerase-like
RHE_CH03367	SSF69118	AhpD-like
RHE_CH03368	SSF51182	RmlC-like cupins
RHE_CH03369	SSF50331	MOP-like
RHE_CH03369	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03370	SSF161098	MetI-like
RHE_CH03371	SSF161098	MetI-like
RHE_CH03372	SSF53850	Periplasmic binding protein-like II
RHE_CH03373	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03373	SSF53067	Actin-like ATPase domain
RHE_CH03374	SSF53850	Periplasmic binding protein-like II
RHE_CH03375	SSF161098	MetI-like
RHE_CH03376	SSF161098	MetI-like
RHE_CH03377	SSF53697	SIS domain
RHE_CH03378	SSF53613	Ribokinase-like
RHE_CH03379	SSF50331	MOP-like
RHE_CH03379	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03380	SSF49899	Concanavalin A-like lectins/glucanases
RHE_CH03382	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RHE_CH03383	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RHE_CH03384	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03384	SSF51206	cAMP-binding domain-like
RHE_CH03386	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03387	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH03388	SSF56954	Outer membrane efflux proteins (OEP)
RHE_CH03391	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH03392	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH03394	SSF50998	Quinoprotein alcohol dehydrogenase-like
RHE_CH03395	SSF49503	Cupredoxins
RHE_CH03406	SSF55120	Pseudouridine synthase
RHE_CH03406	SSF55174	Alpha-L RNA-binding motif
RHE_CH03407	SSF53271	PRTase-like
RHE_CH03408	SSF116726	TrkA C-terminal domain-like
RHE_CH03409	SSF56104	SAICAR synthase-like
RHE_CH03410	SSF46689	Homeodomain-like
RHE_CH03410	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_CH03411	SSF111369	HlyD-like secretion proteins
RHE_CH03412	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RHE_CH03412	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RHE_CH03412	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RHE_CH03413	SSF56954	Outer membrane efflux proteins (OEP)
RHE_CH03414	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH03414	SSF53822	Periplasmic binding protein-like I
RHE_CH03415	SSF53850	Periplasmic binding protein-like II
RHE_CH03416	SSF161098	MetI-like
RHE_CH03417	SSF161098	MetI-like
RHE_CH03418	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03419	SSF53590	Nucleoside hydrolase
RHE_CH03420	SSF51338	Composite domain of metallo-dependent hydrolases
RHE_CH03420	SSF51556	Metallo-dependent hydrolases
RHE_CH03424	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03425	SSF56176	FAD-binding/transporter-associated domain-like
RHE_CH03427	SSF56784	HAD-like
RHE_CH03428	SSF116726	TrkA C-terminal domain-like
RHE_CH03429	SSF53187	Zn-dependent exopeptidases
RHE_CH03429	SSF55031	Bacterial exopeptidase dimerisation domain
RHE_CH03432	SSF53850	Periplasmic binding protein-like II
RHE_CH03433	SSF46689	Homeodomain-like
RHE_CH03433	SSF52172	CheY-like
RHE_CH03433	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03434	SSF103190	Sensory domain-like
RHE_CH03434	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH03434	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH03435	SSF56524	Oxidoreductase molybdopterin-binding domain
RHE_CH03439	SSF53254	Phosphoglycerate mutase-like
RHE_CH03440	SSF141868	EAL domain-like
RHE_CH03440	SSF55073	Nucleotide cyclase
RHE_CH03441	SSF53067	Actin-like ATPase domain
RHE_CH03442	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RHE_CH03443	SSF46689	Homeodomain-like
RHE_CH03443	SSF51182	RmlC-like cupins
RHE_CH03444	SSF51905	FAD/NAD(P)-binding domain
RHE_CH03444	SSF54373	FAD-linked reductases, C-terminal domain
RHE_CH03445	SSF53822	Periplasmic binding protein-like I
RHE_CH03448	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03449	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03452	SSF52402	Adenine nucleotide alpha hydrolases-like
RHE_CH03454	SSF143548	Serine metabolism enzymes domain
RHE_CH03454	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03454	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RHE_CH03454	SSF55021	ACT-like
RHE_CH03455	SSF53383	PLP-dependent transferases
RHE_CH03456	SSF56925	OMPA-like
RHE_CH03457	SSF53738	Phosphoglucomutase, first 3 domains
RHE_CH03457	SSF55957	Phosphoglucomutase, C-terminal domain
RHE_CH03458	SSF140990	FtsH protease domain-like
RHE_CH03458	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03459	SSF52402	Adenine nucleotide alpha hydrolases-like
RHE_CH03460	SSF48452	TPR-like
RHE_CH03461	SSF103088	OmpA-like
RHE_CH03462	SSF52964	TolB, N-terminal domain
RHE_CH03462	SSF69304	Tricorn protease N-terminal domain
RHE_CH03463	SSF74653	TolA/TonB C-terminal domain
RHE_CH03467	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RHE_CH03468	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03469	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH03470	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03471	SSF100950	NagB/RpiA/CoA transferase-like
RHE_CH03472	SSF56300	Metallo-dependent phosphatases
RHE_CH03473	SSF56281	Metallo-hydrolase/oxidoreductase
RHE_CH03474	SSF50475	FMN-binding split barrel
RHE_CH03475	SSF75625	YebC-like
RHE_CH03476	SSF51679	Bacterial luciferase-like
RHE_CH03477	SSF158472	HAMP domain-like
RHE_CH03477	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RHE_CH03478	SSF53098	Ribonuclease H-like
RHE_CH03479	SSF89447	AbrB/MazE/MraZ-like
RHE_CH03480	SSF88723	PIN domain-like
RHE_CH03481	SSF46929	DNA helicase RuvA subunit, C-terminal domain
RHE_CH03481	SSF47781	RuvA domain 2-like
RHE_CH03481	SSF50249	Nucleic acid-binding proteins
RHE_CH03482	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03482	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03483	SSF56300	Metallo-dependent phosphatases
RHE_CH03484	SSF109854	DinB/YfiT-like putative metalloenzymes
RHE_CH03485	SSF53474	alpha/beta-Hydrolases
RHE_CH03486	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH03487	SSF50182	Sm-like ribonucleoproteins
RHE_CH03487	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
RHE_CH03487	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
RHE_CH03488	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RHE_CH03488	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03489	SSF55961	Bet v1-like
RHE_CH03490	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03491	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH03492	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03493	SSF102829	Cell division protein ZapA-like
RHE_CH03495	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RHE_CH03495	SSF52922	TK C-terminal domain-like
RHE_CH03496	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03496	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH03499	SSF53748	Phosphoglycerate kinase
RHE_CH03500	SSF51569	Aldolase
RHE_CH03501	SSF54506	Diaminopimelate epimerase-like
RHE_CH03503	SSF103473	MFS general substrate transporter
RHE_CH03506	SSF143800	L28p-like
RHE_CH03507	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03507	SSF90123	ABC transporter transmembrane region
RHE_CH03508	SSF53850	Periplasmic binding protein-like II
RHE_CH03509	SSF160113	YegP-like
RHE_CH03510	SSF54909	Dimeric alpha+beta barrel
RHE_CH03511	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RHE_CH03512	SSF103088	OmpA-like
RHE_CH03514	SSF56655	Carbohydrate phosphatase
RHE_CH03515	SSF52172	CheY-like
RHE_CH03515	SSF52738	Methylesterase CheB, C-terminal domain
RHE_CH03516	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
RHE_CH03516	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH03517	SSF50341	CheW-like
RHE_CH03518	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RHE_CH03519	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RHE_CH03520	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RHE_CH03521	SSF50341	CheW-like
RHE_CH03522	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RHE_CH03522	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH03522	SSF50341	CheW-like
RHE_CH03522	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH03523	SSF52172	CheY-like
RHE_CH03525	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RHE_CH03526	SSF81901	HCP-like
RHE_CH03527	SSF51391	Thiamin phosphate synthase
RHE_CH03529	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03531	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
RHE_CH03532	SSF51246	Rudiment single hybrid motif
RHE_CH03532	SSF52440	PreATP-grasp domain
RHE_CH03532	SSF56059	Glutathione synthetase ATP-binding domain-like
RHE_CH03533	SSF57840	Ribosomal protein L36
RHE_CH03534	SSF48452	TPR-like
RHE_CH03535	SSF53474	alpha/beta-Hydrolases
RHE_CH03536	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RHE_CH03537	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RHE_CH03538	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03538	SSF53850	Periplasmic binding protein-like II
RHE_CH03539	SSF55331	Tautomerase/MIF
RHE_CH03542	SSF50800	PK beta-barrel domain-like
RHE_CH03542	SSF51621	Phosphoenolpyruvate/pyruvate domain
RHE_CH03542	SSF52935	PK C-terminal domain-like
RHE_CH03544	SSF53187	Zn-dependent exopeptidases
RHE_CH03545	SSF158757	SMc04008-like
RHE_CH03547	SSF55166	Hedgehog/DD-peptidase
RHE_CH03548	SSF46689	Homeodomain-like
RHE_CH03548	SSF52172	CheY-like
RHE_CH03548	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03549	SSF55486	Metalloproteases ("zincins"), catalytic domain
RHE_CH03550	SSF56322	ADC synthase
RHE_CH03551	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
RHE_CH03552	SSF54909	Dimeric alpha+beta barrel
RHE_CH03555	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
RHE_CH03555	SSF56300	Metallo-dependent phosphatases
RHE_CH03556	SSF53800	Chelatase
RHE_CH03557	SSF117892	Band 7/SPFH domain
RHE_CH03559	SSF53697	SIS domain
RHE_CH03560	SSF56925	OMPA-like
RHE_CH03561	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH03562	SSF47090	PGBD-like
RHE_CH03562	SSF53955	Lysozyme-like
RHE_CH03563	SSF52266	SGNH hydrolase
RHE_CH03565	SSF46548	alpha-helical ferredoxin
RHE_CH03565	SSF51971	Nucleotide-binding domain
RHE_CH03566	SSF51395	FMN-linked oxidoreductases
RHE_CH03566	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RHE_CH03566	SSF69336	Alpha subunit of glutamate synthase, C-terminal domain
RHE_CH03568	SSF53383	PLP-dependent transferases
RHE_CH03569	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03569	SSF53850	Periplasmic binding protein-like II
RHE_CH03571	SSF49764	HSP20-like chaperones
RHE_CH03572	SSF53474	alpha/beta-Hydrolases
RHE_CH03573	SSF56655	Carbohydrate phosphatase
RHE_CH03574	SSF53187	Zn-dependent exopeptidases
RHE_CH03575	SSF52172	CheY-like
RHE_CH03578	SSF56935	Porins
RHE_CH03580	SSF50199	Staphylococcal nuclease
RHE_CH03584	SSF53850	Periplasmic binding protein-like II
RHE_CH03585	SSF53850	Periplasmic binding protein-like II
RHE_CH03586	SSF48452	TPR-like
RHE_CH03586	SSF52964	TolB, N-terminal domain
RHE_CH03586	SSF55073	Nucleotide cyclase
RHE_CH03587	SSF52172	CheY-like
RHE_CH03588	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_CH03588	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_CH03589	SSF54001	Cysteine proteinases
RHE_CH03590	SSF56059	Glutathione synthetase ATP-binding domain-like
RHE_CH03591	SSF54001	Cysteine proteinases
RHE_CH03592	SSF53300	vWA-like
RHE_CH03593	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RHE_CH03594	SSF51011	Glycosyl hydrolase domain
RHE_CH03594	SSF51445	(Trans)glycosidases
RHE_CH03594	SSF81296	E set domains
RHE_CH03595	SSF51161	Trimeric LpxA-like enzymes
RHE_CH03595	SSF53448	Nucleotide-diphospho-sugar transferases
RHE_CH03596	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RHE_CH03599	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RHE_CH03600	SSF103025	Folate-binding domain
RHE_CH03601	SSF101790	Aminomethyltransferase beta-barrel domain
RHE_CH03601	SSF103025	Folate-binding domain
RHE_CH03601	SSF51905	FAD/NAD(P)-binding domain
RHE_CH03603	SSF51905	FAD/NAD(P)-binding domain
RHE_CH03603	SSF54373	FAD-linked reductases, C-terminal domain
RHE_CH03605	SSF55073	Nucleotide cyclase
RHE_CH03606	SSF55073	Nucleotide cyclase
RHE_CH03608	SSF48439	Protein prenylyltransferase
RHE_CH03611	SSF52467	DHS-like NAD/FAD-binding domain
RHE_CH03613	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03613	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RHE_CH03614	SSF81469	Bacterial aa3 type cytochrome c oxidase subunit IV
RHE_CH03615	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH03616	SSF141868	EAL domain-like
RHE_CH03616	SSF55073	Nucleotide cyclase
RHE_CH03616	SSF55785	PYP-like sensor domain (PAS domain)
RHE_CH03620	SSF52317	Class I glutamine amidotransferase-like
RHE_CH03621	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03621	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RHE_CH03622	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH03622	SSF53822	Periplasmic binding protein-like I
RHE_CH03623	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03624	SSF102215	Creatininase
RHE_CH03625	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03625	SSF90002	Hypothetical protein YjiA, C-terminal domain
RHE_CH03626	SSF50998	Quinoprotein alcohol dehydrogenase-like
RHE_CH03627	SSF51161	Trimeric LpxA-like enzymes
RHE_CH03628	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH03629	SSF50621	Alanine racemase C-terminal domain-like
RHE_CH03629	SSF51419	PLP-binding barrel
RHE_CH03630	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03630	SSF53850	Periplasmic binding protein-like II
RHE_CH03633	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH03634	SSF158682	TerB-like
RHE_CH03635	SSF51569	Aldolase
RHE_CH03636	SSF55154	CYTH-like phosphatases
RHE_CH03638	SSF52821	Rhodanese/Cell cycle control phosphatase
RHE_CH03639	SSF141868	EAL domain-like
RHE_CH03639	SSF55073	Nucleotide cyclase
RHE_CH03640	SSF51445	(Trans)glycosidases
RHE_CH03642	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03642	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH03643	SSF51658	Xylose isomerase-like
RHE_CH03644	SSF53822	Periplasmic binding protein-like I
RHE_CH03646	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03647	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH03647	SSF53822	Periplasmic binding protein-like I
RHE_CH03648	SSF51658	Xylose isomerase-like
RHE_CH03649	SSF53067	Actin-like ATPase domain
RHE_CH03650	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH03650	SSF53822	Periplasmic binding protein-like I
RHE_CH03651	SSF103473	MFS general substrate transporter
RHE_CH03652	SSF111369	HlyD-like secretion proteins
RHE_CH03653	SSF46689	Homeodomain-like
RHE_CH03653	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_CH03654	SSF46689	Homeodomain-like
RHE_CH03654	SSF55136	Probable bacterial effector-binding domain
RHE_CH03656	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
RHE_CH03656	SSF52374	Nucleotidylyl transferase
RHE_CH03657	SSF50249	Nucleic acid-binding proteins
RHE_CH03657	SSF55681	Class II aaRS and biotin synthetases
RHE_CH03659	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03659	SSF53850	Periplasmic binding protein-like II
RHE_CH03660	SSF53850	Periplasmic binding protein-like II
RHE_CH03661	SSF50331	MOP-like
RHE_CH03661	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03663	SSF161098	MetI-like
RHE_CH03664	SSF53720	ALDH-like
RHE_CH03667	SSF51569	Aldolase
RHE_CH03668	SSF100950	NagB/RpiA/CoA transferase-like
RHE_CH03668	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RHE_CH03669	SSF46689	Homeodomain-like
RHE_CH03669	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
RHE_CH03669	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
RHE_CH03671	SSF48150	DNA-glycosylase
RHE_CH03672	SSF46689	Homeodomain-like
RHE_CH03673	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH03675	SSF46689	Homeodomain-like
RHE_CH03675	SSF53697	SIS domain
RHE_CH03676	SSF53067	Actin-like ATPase domain
RHE_CH03677	SSF56784	HAD-like
RHE_CH03678	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RHE_CH03678	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03679	SSF50331	MOP-like
RHE_CH03679	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03680	SSF161098	MetI-like
RHE_CH03681	SSF161098	MetI-like
RHE_CH03682	SSF53850	Periplasmic binding protein-like II
RHE_CH03683	SSF100950	NagB/RpiA/CoA transferase-like
RHE_CH03685	SSF53067	Actin-like ATPase domain
RHE_CH03686	SSF51445	(Trans)glycosidases
RHE_CH03686	SSF55545	beta-N-acetylhexosaminidase-like domain
RHE_CH03687	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RHE_CH03687	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RHE_CH03687	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RHE_CH03688	SSF111369	HlyD-like secretion proteins
RHE_CH03689	SSF46689	Homeodomain-like
RHE_CH03689	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_CH03690	SSF82784	OsmC-like
RHE_CH03691	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03692	SSF74650	Galactose mutarotase-like
RHE_CH03694	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03695	SSF53822	Periplasmic binding protein-like I
RHE_CH03696	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03696	SSF48008	GntR ligand-binding domain-like
RHE_CH03697	SSF51604	Enolase C-terminal domain-like
RHE_CH03697	SSF54826	Enolase N-terminal domain-like
RHE_CH03699	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03700	SSF55073	Nucleotide cyclase
RHE_CH03701	SSF53822	Periplasmic binding protein-like I
RHE_CH03702	SSF51197	Clavaminate synthase-like
RHE_CH03703	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03704	SSF63829	Calcium-dependent phosphotriesterase
RHE_CH03705	SSF49303	beta-Galactosidase/glucuronidase domain
RHE_CH03705	SSF49785	Galactose-binding domain-like
RHE_CH03705	SSF51445	(Trans)glycosidases
RHE_CH03706	SSF50331	MOP-like
RHE_CH03706	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03707	SSF161098	MetI-like
RHE_CH03708	SSF161098	MetI-like
RHE_CH03709	SSF53850	Periplasmic binding protein-like II
RHE_CH03710	SSF47413	lambda repressor-like DNA-binding domains
RHE_CH03710	SSF53822	Periplasmic binding protein-like I
RHE_CH03711	SSF52402	Adenine nucleotide alpha hydrolases-like
RHE_CH03712	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RHE_CH03713	SSF102114	Radical SAM enzymes
RHE_CH03714	SSF55073	Nucleotide cyclase
RHE_CH03715	SSF47240	Ferritin-like
RHE_CH03716	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
RHE_CH03716	SSF51998	PFL-like glycyl radical enzymes
RHE_CH03717	SSF52218	Flavoproteins
RHE_CH03718	SSF52833	Thioredoxin-like
RHE_CH03719	SSF55008	HMA, heavy metal-associated domain
RHE_CH03719	SSF56784	HAD-like
RHE_CH03719	SSF81653	Calcium ATPase, transduction domain A
RHE_CH03719	SSF81665	Calcium ATPase, transmembrane domain M
RHE_CH03720	SSF46955	Putative DNA-binding domain
RHE_CH03721	SSF160996	HI0933 insert domain-like
RHE_CH03721	SSF51905	FAD/NAD(P)-binding domain
RHE_CH03722	SSF46689	Homeodomain-like
RHE_CH03722	SSF55781	GAF domain-like
RHE_CH03723	SSF53720	ALDH-like
RHE_CH03725	SSF52317	Class I glutamine amidotransferase-like
RHE_CH03727	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03737	SSF56770	HydA/Nqo6-like
RHE_CH03738	SSF143243	Nqo5-like
RHE_CH03739	SSF56762	HydB/Nqo4-like
RHE_CH03740	SSF52833	Thioredoxin-like
RHE_CH03741	SSF140490	Nqo1C-terminal domain-like
RHE_CH03741	SSF142019	Nqo1 FMN-binding domain-like
RHE_CH03741	SSF142984	Nqo1 middle domain-like
RHE_CH03742	SSF50692	ADC-like
RHE_CH03742	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
RHE_CH03742	SSF54292	2Fe-2S ferredoxin-like
RHE_CH03742	SSF54862	4Fe-4S ferredoxins
RHE_CH03743	SSF54631	CBS-domain pair
RHE_CH03744	SSF54862	4Fe-4S ferredoxins
RHE_CH03752	SSF51261	Duplicated hybrid motif
RHE_CH03753	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03753	SSF81923	Double Clp-N motif
RHE_CH03755	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH03756	SSF75620	Release factor
RHE_CH03757	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
RHE_CH03757	SSF51621	Phosphoenolpyruvate/pyruvate domain
RHE_CH03757	SSF52009	Phosphohistidine domain
RHE_CH03757	SSF55781	GAF domain-like
RHE_CH03758	SSF53633	Carbamate kinase-like
RHE_CH03758	SSF55021	ACT-like
RHE_CH03759	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH03761	SSF56317	Carbon-nitrogen hydrolase
RHE_CH03762	SSF52833	Thioredoxin-like
RHE_CH03763	SSF53271	PRTase-like
RHE_CH03764	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH03766	SSF55811	Nudix
RHE_CH03767	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH03768	SSF56266	DmpA/ArgJ-like
RHE_CH03769	SSF109998	Triger factor/SurA peptide-binding domain-like
RHE_CH03769	SSF54534	FKBP-like
RHE_CH03770	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03770	SSF81767	Pre-protein crosslinking domain of SecA
RHE_CH03770	SSF81886	Helical scaffold and wing domains of SecA
RHE_CH03772	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH03773	SSF56801	Acetyl-CoA synthetase-like
RHE_CH03774	SSF51430	NAD(P)-linked oxidoreductase
RHE_CH03775	SSF46689	Homeodomain-like
RHE_CH03775	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_CH03776	SSF103473	MFS general substrate transporter
RHE_CH03780	SSF51206	cAMP-binding domain-like
RHE_CH03783	SSF158442	DsbB-like
RHE_CH03785	SSF48150	DNA-glycosylase
RHE_CH03786	SSF52374	Nucleotidylyl transferase
RHE_CH03788	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03790	SSF89028	Cobalamin adenosyltransferase-like
RHE_CH03791	SSF144091	Rhomboid-like
RHE_CH03792	SSF52402	Adenine nucleotide alpha hydrolases-like
RHE_CH03793	SSF52402	Adenine nucleotide alpha hydrolases-like
RHE_CH03793	SSF52467	DHS-like NAD/FAD-binding domain
RHE_CH03794	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RHE_CH03794	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03795	SSF52833	Thioredoxin-like
RHE_CH03796	SSF48557	L-aspartase-like
RHE_CH03797	SSF50621	Alanine racemase C-terminal domain-like
RHE_CH03797	SSF51419	PLP-binding barrel
RHE_CH03799	SSF52172	CheY-like
RHE_CH03800	SSF53271	PRTase-like
RHE_CH03802	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03805	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
RHE_CH03806	SSF110857	Gamma-glutamyl cyclotransferase-like
RHE_CH03808	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH03809	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RHE_CH03809	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03810	SSF53383	PLP-dependent transferases
RHE_CH03811	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH03812	SSF56281	Metallo-hydrolase/oxidoreductase
RHE_CH03813	SSF51182	RmlC-like cupins
RHE_CH03814	SSF103481	Multidrug resistance efflux transporter EmrE
RHE_CH03816	SSF143800	L28p-like
RHE_CH03818	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03820	SSF53300	vWA-like
RHE_CH03821	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03822	SSF46565	Chaperone J-domain
RHE_CH03823	SSF82657	BolA-like
RHE_CH03824	SSF54631	CBS-domain pair
RHE_CH03824	SSF56176	FAD-binding/transporter-associated domain-like
RHE_CH03825	SSF56796	Dehydroquinate synthase-like
RHE_CH03826	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03827	SSF56349	DNA breaking-rejoining enzymes
RHE_CH03828	SSF52096	ClpP/crotonase
RHE_CH03829	SSF141523	L,D-transpeptidase catalytic domain-like
RHE_CH03830	SSF64307	SirA-like
RHE_CH03831	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03831	SSF90002	Hypothetical protein YjiA, C-terminal domain
RHE_CH03832	SSF56601	beta-lactamase/transpeptidase-like
RHE_CH03833	SSF53187	Zn-dependent exopeptidases
RHE_CH03833	SSF55031	Bacterial exopeptidase dimerisation domain
RHE_CH03839	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03839	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH03839	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
RHE_CH03840	SSF50331	MOP-like
RHE_CH03840	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03841	SSF48208	Six-hairpin glycosidases
RHE_CH03842	SSF161098	MetI-like
RHE_CH03843	SSF160964	MalF N-terminal region-like
RHE_CH03843	SSF161098	MetI-like
RHE_CH03844	SSF53850	Periplasmic binding protein-like II
RHE_CH03845	SSF53822	Periplasmic binding protein-like I
RHE_CH03846	SSF53383	PLP-dependent transferases
RHE_CH03850	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03850	SSF54909	Dimeric alpha+beta barrel
RHE_CH03851	SSF52768	Arginase/deacetylase
RHE_CH03852	SSF53383	PLP-dependent transferases
RHE_CH03853	SSF50341	CheW-like
RHE_CH03856	SSF53927	Cytidine deaminase-like
RHE_CH03857	SSF50692	ADC-like
RHE_CH03857	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
RHE_CH03857	SSF54292	2Fe-2S ferredoxin-like
RHE_CH03857	SSF54862	4Fe-4S ferredoxins
RHE_CH03858	SSF140490	Nqo1C-terminal domain-like
RHE_CH03858	SSF142019	Nqo1 FMN-binding domain-like
RHE_CH03858	SSF142984	Nqo1 middle domain-like
RHE_CH03858	SSF52833	Thioredoxin-like
RHE_CH03859	SSF52833	Thioredoxin-like
RHE_CH03860	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03860	SSF53850	Periplasmic binding protein-like II
RHE_CH03861	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03862	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03863	SSF46955	Putative DNA-binding domain
RHE_CH03864	SSF161098	MetI-like
RHE_CH03865	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03866	SSF53850	Periplasmic binding protein-like II
RHE_CH03869	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
RHE_CH03870	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
RHE_CH03870	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
RHE_CH03870	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03871	SSF52943	ATP synthase (F1-ATPase), gamma subunit
RHE_CH03872	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
RHE_CH03872	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
RHE_CH03872	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03873	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
RHE_CH03875	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03876	SSF51569	Aldolase
RHE_CH03877	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH03878	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
RHE_CH03879	SSF56349	DNA breaking-rejoining enzymes
RHE_CH03881	SSF81342	Transmembrane di-heme cytochromes
RHE_CH03882	SSF51905	FAD/NAD(P)-binding domain
RHE_CH03882	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RHE_CH03884	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03887	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
RHE_CH03887	SSF51230	Single hybrid motif
RHE_CH03887	SSF52777	CoA-dependent acyltransferases
RHE_CH03888	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RHE_CH03889	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03889	SSF52210	Succinyl-CoA synthetase domains
RHE_CH03890	SSF52210	Succinyl-CoA synthetase domains
RHE_CH03890	SSF56059	Glutathione synthetase ATP-binding domain-like
RHE_CH03891	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03891	SSF56327	LDH C-terminal domain-like
RHE_CH03892	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03893	SSF50882	beta-Barrel protease inhibitors
RHE_CH03894	SSF46548	alpha-helical ferredoxin
RHE_CH03894	SSF54292	2Fe-2S ferredoxin-like
RHE_CH03895	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
RHE_CH03895	SSF51905	FAD/NAD(P)-binding domain
RHE_CH03895	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
RHE_CH03896	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
RHE_CH03897	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
RHE_CH03899	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH03900	SSF88697	PUA domain-like
RHE_CH03901	SSF54909	Dimeric alpha+beta barrel
RHE_CH03902	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RHE_CH03902	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03903	SSF53067	Actin-like ATPase domain
RHE_CH03904	SSF53850	Periplasmic binding protein-like II
RHE_CH03904	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
RHE_CH03905	SSF69618	HemD-like
RHE_CH03907	SSF48452	TPR-like
RHE_CH03908	SSF158682	TerB-like
RHE_CH03909	SSF52317	Class I glutamine amidotransferase-like
RHE_CH03910	SSF103473	MFS general substrate transporter
RHE_CH03912	SSF69786	YggU-like
RHE_CH03913	SSF50324	Inorganic pyrophosphatase
RHE_CH03914	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH03915	SSF50447	Translation proteins
RHE_CH03915	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03915	SSF54980	EF-G C-terminal domain-like
RHE_CH03916	SSF55486	Metalloproteases ("zincins"), catalytic domain
RHE_CH03920	SSF82784	OsmC-like
RHE_CH03922	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03922	SSF53850	Periplasmic binding protein-like II
RHE_CH03924	SSF52402	Adenine nucleotide alpha hydrolases-like
RHE_CH03924	SSF69864	Argininosuccinate synthetase, C-terminal domain
RHE_CH03925	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03927	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03929	SSF53822	Periplasmic binding protein-like I
RHE_CH03930	SSF102114	Radical SAM enzymes
RHE_CH03932	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RHE_CH03932	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RHE_CH03934	SSF55248	PCD-like
RHE_CH03935	SSF52788	Phosphotyrosine protein phosphatases I
RHE_CH03936	SSF55144	LigT-like
RHE_CH03937	SSF52266	SGNH hydrolase
RHE_CH03938	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03941	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH03943	SSF52833	Thioredoxin-like
RHE_CH03944	SSF52016	LeuD/IlvD-like
RHE_CH03944	SSF53732	Aconitase iron-sulfur domain
RHE_CH03945	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03950	SSF52833	Thioredoxin-like
RHE_CH03953	SSF47364	Domain of the SRP/SRP receptor G-proteins
RHE_CH03953	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03954	SSF102114	Radical SAM enzymes
RHE_CH03955	SSF54506	Diaminopimelate epimerase-like
RHE_CH03957	SSF47446	Signal peptide-binding domain
RHE_CH03957	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03958	SSF48600	Chorismate mutase II
RHE_CH03959	SSF54565	Ribosomal protein S16
RHE_CH03960	SSF50346	PRC-barrel domain
RHE_CH03960	SSF50447	Translation proteins
RHE_CH03961	SSF75217	alpha/beta knot
RHE_CH03962	SSF50104	Translation proteins SH3-like domain
RHE_CH03963	SSF53850	Periplasmic binding protein-like II
RHE_CH03964	SSF161098	MetI-like
RHE_CH03965	SSF53732	Aconitase iron-sulfur domain
RHE_CH03966	SSF51430	NAD(P)-linked oxidoreductase
RHE_CH03967	SSF141523	L,D-transpeptidase catalytic domain-like
RHE_CH03968	SSF52172	CheY-like
RHE_CH03969	SSF51206	cAMP-binding domain-like
RHE_CH03970	SSF56219	DNase I-like
RHE_CH03971	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
RHE_CH03972	SSF46785	"Winged helix" DNA-binding domain
RHE_CH03972	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03973	SSF111352	Ammonium transporter
RHE_CH03974	SSF54913	GlnB-like
RHE_CH03975	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RHE_CH03976	SSF51905	FAD/NAD(P)-binding domain
RHE_CH03977	SSF158997	Trm112p-like
RHE_CH03978	SSF88697	PUA domain-like
RHE_CH03979	SSF48452	TPR-like
RHE_CH03979	SSF52833	Thioredoxin-like
RHE_CH03980	SSF55826	YbaK/ProRS associated domain
RHE_CH03984	SSF52317	Class I glutamine amidotransferase-like
RHE_CH03985	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH03986	SSF53649	Alkaline phosphatase-like
RHE_CH03987	SSF109854	DinB/YfiT-like putative metalloenzymes
RHE_CH03988	SSF53822	Periplasmic binding protein-like I
RHE_CH03989	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03991	SSF51556	Metallo-dependent hydrolases
RHE_CH03992	SSF53850	Periplasmic binding protein-like II
RHE_CH03993	SSF161098	MetI-like
RHE_CH03994	SSF161098	MetI-like
RHE_CH03995	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03996	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH03997	SSF48208	Six-hairpin glycosidases
RHE_CH03997	SSF74650	Galactose mutarotase-like
RHE_CH03999	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH04000	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH04000	SSF90123	ABC transporter transmembrane region
RHE_CH04001	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_CH04001	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
RHE_CH04002	SSF51230	Single hybrid motif
RHE_CH04002	SSF51246	Rudiment single hybrid motif
RHE_CH04002	SSF51569	Aldolase
RHE_CH04002	SSF52440	PreATP-grasp domain
RHE_CH04002	SSF56059	Glutathione synthetase ATP-binding domain-like
RHE_CH04002	SSF89000	post-HMGL domain-like
RHE_CH04003	SSF52218	Flavoproteins
RHE_CH04004	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH04005	SSF161098	MetI-like
RHE_CH04006	SSF53850	Periplasmic binding protein-like II
RHE_CH04007	SSF100950	NagB/RpiA/CoA transferase-like
RHE_CH04007	SSF46785	"Winged helix" DNA-binding domain
RHE_CH04008	SSF103473	MFS general substrate transporter
RHE_CH04009	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
RHE_CH04010	SSF53383	PLP-dependent transferases
RHE_CH04011	SSF48576	Terpenoid synthases
RHE_CH04012	SSF53955	Lysozyme-like
RHE_CH04013	SSF55144	LigT-like
RHE_CH04014	SSF47616	GST C-terminal domain-like
RHE_CH04014	SSF52833	Thioredoxin-like
RHE_CH04015	SSF57829	Zn-binding ribosomal proteins
RHE_CH04018	SSF53901	Thiolase-like
RHE_CH04019	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH04022	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH04023	SSF55174	Alpha-L RNA-binding motif
RHE_CH04024	SSF54862	4Fe-4S ferredoxins
RHE_CH04025	SSF141259	CarD-like
RHE_CH04026	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RHE_CH04026	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RHE_CH04028	SSF103473	MFS general substrate transporter
RHE_CH04029	SSF46785	"Winged helix" DNA-binding domain
RHE_CH04030	SSF63999	Thiamin pyrophosphokinase, catalytic domain
RHE_CH04031	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH04032	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH04032	SSF90123	ABC transporter transmembrane region
RHE_CH04033	SSF52317	Class I glutamine amidotransferase-like
RHE_CH04034	SSF74650	Galactose mutarotase-like
RHE_CH04035	SSF46785	"Winged helix" DNA-binding domain
RHE_CH04035	SSF64288	Chorismate lyase-like
RHE_CH04036	SSF53697	SIS domain
RHE_CH04037	SSF51338	Composite domain of metallo-dependent hydrolases
RHE_CH04037	SSF51556	Metallo-dependent hydrolases
RHE_CH04038	SSF53697	SIS domain
RHE_CH04040	SSF50104	Translation proteins SH3-like domain
RHE_CH04040	SSF50249	Nucleic acid-binding proteins
RHE_CH04041	SSF55681	Class II aaRS and biotin synthetases
RHE_CH04042	SSF102114	Radical SAM enzymes
RHE_CH04043	SSF47336	ACP-like
RHE_CH04044	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RHE_CH04044	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RHE_CH04045	SSF55681	Class II aaRS and biotin synthetases
RHE_CH04047	SSF49303	beta-Galactosidase/glucuronidase domain
RHE_CH04047	SSF49785	Galactose-binding domain-like
RHE_CH04047	SSF51445	(Trans)glycosidases
RHE_CH04048	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RHE_CH04049	SSF53474	alpha/beta-Hydrolases
RHE_CH04050	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RHE_CH04051	SSF54909	Dimeric alpha+beta barrel
RHE_CH04052	SSF46785	"Winged helix" DNA-binding domain
RHE_CH04052	SSF53850	Periplasmic binding protein-like II
RHE_CH04054	SSF51905	FAD/NAD(P)-binding domain
RHE_CH04055	SSF53720	ALDH-like
RHE_CH04056	SSF53850	Periplasmic binding protein-like II
RHE_CH04057	SSF161098	MetI-like
RHE_CH04058	SSF50331	MOP-like
RHE_CH04058	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH04062	SSF141091	L21p-like
RHE_CH04063	SSF110324	Ribosomal L27 protein-like
RHE_CH04064	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH04065	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_CH04066	SSF56219	DNase I-like
RHE_CH04067	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH04067	SSF82051	Obg GTP-binding protein N-terminal domain
RHE_CH04068	SSF53633	Carbamate kinase-like
RHE_CH04068	SSF88697	PUA domain-like
RHE_CH04069	SSF53720	ALDH-like
RHE_CH04070	SSF52374	Nucleotidylyl transferase
RHE_CH04071	SSF53850	Periplasmic binding protein-like II
RHE_CH04072	SSF161098	MetI-like
RHE_CH04073	SSF50331	MOP-like
RHE_CH04073	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH04074	SSF46785	"Winged helix" DNA-binding domain
RHE_CH04075	SSF81301	Nucleotidyltransferase
RHE_CH04076	SSF75217	alpha/beta knot
RHE_CH04077	SSF51261	Duplicated hybrid motif
RHE_CH04078	SSF50156	PDZ domain-like
RHE_CH04078	SSF52096	ClpP/crotonase
RHE_CH04079	SSF88713	Glycoside hydrolase/deacetylase
RHE_CH04080	SSF55811	Nudix
RHE_CH04081	SSF47240	Ferritin-like
RHE_CH04084	SSF56672	DNA/RNA polymerases
RHE_CH04085	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH04086	SSF55486	Metalloproteases ("zincins"), catalytic domain
RHE_CH04088	SSF51621	Phosphoenolpyruvate/pyruvate domain
RHE_CH04090	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_CH04091	SSF52016	LeuD/IlvD-like
RHE_CH04092	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RHE_CH04093	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RHE_CH04094	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
RHE_CH04095	SSF103473	MFS general substrate transporter
RHE_CH04097	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH04099	SSF53649	Alkaline phosphatase-like
RHE_CH04100	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH04100	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_CH04101	SSF53955	Lysozyme-like
RHE_CH04102	SSF55073	Nucleotide cyclase
RHE_CH04103	SSF53056	beta-carbonic anhydrase, cab
RHE_CH04105	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_CH04105	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RHE_CH04106	SSF103473	MFS general substrate transporter
RHE_CH04107	SSF52335	Methylglyoxal synthase-like
RHE_CH04107	SSF53927	Cytidine deaminase-like
RHE_CH04109	SSF48013	NusB-like
RHE_CH04109	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH04112	SSF56801	Acetyl-CoA synthetase-like
RHE_CH04114	SSF56801	Acetyl-CoA synthetase-like
RHE_CH04115	SSF51419	PLP-binding barrel
RHE_CH04116	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RHE_CH04116	SSF50677	ValRS/IleRS/LeuRS editing domain
RHE_CH04116	SSF52374	Nucleotidylyl transferase
RHE_CH04118	SSF48019	post-AAA+ oligomerization domain-like
RHE_CH04118	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH04119	SSF110849	ParB/Sulfiredoxin
RHE_CH04120	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH04121	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_CH04122	SSF51905	FAD/NAD(P)-binding domain
RHE_CH04123	SSF116878	TrmE connector domain
RHE_CH04123	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH04124	SSF50249	Nucleic acid-binding proteins
RHE_CH04124	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_CH04124	SSF68912	Rho N-terminal domain-like
RHE_CH04126	SSF51726	UROD/MetE-like