RHE_PF00001	SSF52374	Nucleotidylyl transferase
RHE_PF00002	SSF51621	Phosphoenolpyruvate/pyruvate domain
RHE_PF00003	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00003	SSF53850	Periplasmic binding protein-like II
RHE_PF00004	SSF48113	Heme-dependent peroxidases
RHE_PF00005	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00007	SSF50475	FMN-binding split barrel
RHE_PF00008	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00009	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00009	SSF53850	Periplasmic binding protein-like II
RHE_PF00010	SSF54427	NTF2-like
RHE_PF00011	SSF50129	GroES-like
RHE_PF00011	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00012	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RHE_PF00013	SSF56801	Acetyl-CoA synthetase-like
RHE_PF00014	SSF53901	Thiolase-like
RHE_PF00015	SSF53850	Periplasmic binding protein-like II
RHE_PF00016	SSF51182	RmlC-like cupins
RHE_PF00017	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00018	SSF51182	RmlC-like cupins
RHE_PF00019	SSF53383	PLP-dependent transferases
RHE_PF00023	SSF51316	Mss4-like
RHE_PF00024	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00025	SSF111331	NAD kinase/diacylglycerol kinase-like
RHE_PF00026	SSF117892	Band 7/SPFH domain
RHE_PF00027	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00027	SSF55811	Nudix
RHE_PF00028	SSF103473	MFS general substrate transporter
RHE_PF00029	SSF52402	Adenine nucleotide alpha hydrolases-like
RHE_PF00030	SSF101473	DhaL-like
RHE_PF00031	SSF82549	DAK1/DegV-like
RHE_PF00033	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00033	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_PF00035	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00036	SSF141318	TM0957-like
RHE_PF00037	SSF53822	Periplasmic binding protein-like I
RHE_PF00038	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00039	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
RHE_PF00040	SSF51351	Triosephosphate isomerase (TIM)
RHE_PF00041	SSF142764	YgbK-like
RHE_PF00042	SSF51649	RuBisCo, C-terminal domain
RHE_PF00042	SSF54966	RuBisCO, large subunit, small (N-terminal) domain
RHE_PF00043	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00043	SSF48008	GntR ligand-binding domain-like
RHE_PF00045	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00045	SSF90123	ABC transporter transmembrane region
RHE_PF00046	SSF53822	Periplasmic binding protein-like I
RHE_PF00047	SSF53850	Periplasmic binding protein-like II
RHE_PF00048	SSF161098	MetI-like
RHE_PF00049	SSF161098	MetI-like
RHE_PF00050	SSF49899	Concanavalin A-like lectins/glucanases
RHE_PF00050	SSF75005	Arabinanase/levansucrase/invertase
RHE_PF00051	SSF47240	Ferritin-like
RHE_PF00052	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RHE_PF00052	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RHE_PF00053	SSF48264	Cytochrome P450
RHE_PF00056	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RHE_PF00056	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RHE_PF00057	SSF51206	cAMP-binding domain-like
RHE_PF00058	SSF47240	Ferritin-like
RHE_PF00060	SSF53474	alpha/beta-Hydrolases
RHE_PF00061	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00061	SSF51206	cAMP-binding domain-like
RHE_PF00065	SSF55785	PYP-like sensor domain (PAS domain)
RHE_PF00065	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_PF00067	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00067	SSF48008	GntR ligand-binding domain-like
RHE_PF00071	SSF50129	GroES-like
RHE_PF00071	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00072	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00072	SSF51206	cAMP-binding domain-like
RHE_PF00072	SSF52172	CheY-like
RHE_PF00073	SSF52172	CheY-like
RHE_PF00074	SSF52172	CheY-like
RHE_PF00075	SSF52738	Methylesterase CheB, C-terminal domain
RHE_PF00076	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
RHE_PF00076	SSF52738	Methylesterase CheB, C-terminal domain
RHE_PF00076	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_PF00076	SSF55785	PYP-like sensor domain (PAS domain)
RHE_PF00077	SSF52172	CheY-like
RHE_PF00078	SSF55073	Nucleotide cyclase
RHE_PF00079	SSF158472	HAMP domain-like
RHE_PF00079	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_PF00080	SSF52172	CheY-like
RHE_PF00084	SSF56300	Metallo-dependent phosphatases
RHE_PF00086	SSF55811	Nudix
RHE_PF00087	SSF47413	lambda repressor-like DNA-binding domains
RHE_PF00087	SSF53822	Periplasmic binding protein-like I
RHE_PF00088	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00089	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00090	SSF50331	MOP-like
RHE_PF00090	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00091	SSF53850	Periplasmic binding protein-like II
RHE_PF00092	SSF161098	MetI-like
RHE_PF00093	SSF161098	MetI-like
RHE_PF00094	SSF51569	Aldolase
RHE_PF00095	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00095	SSF48008	GntR ligand-binding domain-like
RHE_PF00096	SSF53850	Periplasmic binding protein-like II
RHE_PF00097	SSF161098	MetI-like
RHE_PF00098	SSF161098	MetI-like
RHE_PF00099	SSF53613	Ribokinase-like
RHE_PF00102	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00103	SSF48613	Heme oxygenase-like
RHE_PF00107	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_PF00108	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RHE_PF00110	SSF52980	Restriction endonuclease-like
RHE_PF00116	SSF47413	lambda repressor-like DNA-binding domains
RHE_PF00118	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00118	SSF51206	cAMP-binding domain-like
RHE_PF00120	SSF52172	CheY-like
RHE_PF00122	SSF110942	HSP90 C-terminal domain
RHE_PF00122	SSF54211	Ribosomal protein S5 domain 2-like
RHE_PF00122	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_PF00130	SSF50249	Nucleic acid-binding proteins
RHE_PF00134	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00137	SSF51905	FAD/NAD(P)-binding domain
RHE_PF00140	SSF52266	SGNH hydrolase
RHE_PF00141	SSF141868	EAL domain-like
RHE_PF00141	SSF55073	Nucleotide cyclase
RHE_PF00142	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00143	SSF55331	Tautomerase/MIF
RHE_PF00144	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00145	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00145	SSF53850	Periplasmic binding protein-like II
RHE_PF00146	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00146	SSF51206	cAMP-binding domain-like
RHE_PF00147	SSF143081	BB1717-like
RHE_PF00148	SSF143081	BB1717-like
RHE_PF00149	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
RHE_PF00149	SSF56672	DNA/RNA polymerases
RHE_PF00150	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00151	SSF56672	DNA/RNA polymerases
RHE_PF00152	SSF89550	PHP domain-like
RHE_PF00155	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00156	SSF50129	GroES-like
RHE_PF00156	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00157	SSF143744	GlcG-like
RHE_PF00158	SSF50814	Lipocalins
RHE_PF00159	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00160	SSF161098	MetI-like
RHE_PF00161	SSF161098	MetI-like
RHE_PF00162	SSF53850	Periplasmic binding protein-like II
RHE_PF00163	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00163	SSF48008	GntR ligand-binding domain-like
RHE_PF00164	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00165	SSF161098	MetI-like
RHE_PF00166	SSF161098	MetI-like
RHE_PF00167	SSF53850	Periplasmic binding protein-like II
RHE_PF00168	SSF158837	AGR C 984p-like
RHE_PF00169	SSF46689	Homeodomain-like
RHE_PF00169	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_PF00170	SSF47473	EF-hand
RHE_PF00171	SSF117143	Flagellar hook protein flgE
RHE_PF00173	SSF64518	Phase 1 flagellin
RHE_PF00178	SSF158472	HAMP domain-like
RHE_PF00178	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RHE_PF00179	SSF53187	Zn-dependent exopeptidases
RHE_PF00180	SSF53092	Creatinase/prolidase N-terminal domain
RHE_PF00180	SSF55920	Creatinase/aminopeptidase
RHE_PF00181	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00182	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RHE_PF00184	SSF161098	MetI-like
RHE_PF00185	SSF161098	MetI-like
RHE_PF00186	SSF53850	Periplasmic binding protein-like II
RHE_PF00187	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00188	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00188	SSF53383	PLP-dependent transferases
RHE_PF00189	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00189	SSF54909	Dimeric alpha+beta barrel
RHE_PF00190	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00191	SSF161098	MetI-like
RHE_PF00192	SSF53850	Periplasmic binding protein-like II
RHE_PF00193	SSF69118	AhpD-like
RHE_PF00194	SSF53474	alpha/beta-Hydrolases
RHE_PF00195	SSF51679	Bacterial luciferase-like
RHE_PF00196	SSF53720	ALDH-like
RHE_PF00197	SSF50475	FMN-binding split barrel
RHE_PF00198	SSF55781	GAF domain-like
RHE_PF00199	SSF160519	BB2672-like
RHE_PF00200	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00200	SSF54909	Dimeric alpha+beta barrel
RHE_PF00201	SSF53720	ALDH-like
RHE_PF00202	SSF53383	PLP-dependent transferases
RHE_PF00203	SSF50129	GroES-like
RHE_PF00203	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00205	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00205	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_PF00206	SSF52317	Class I glutamine amidotransferase-like
RHE_PF00207	SSF50331	MOP-like
RHE_PF00207	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00208	SSF161098	MetI-like
RHE_PF00209	SSF161098	MetI-like
RHE_PF00210	SSF53850	Periplasmic binding protein-like II
RHE_PF00211	SSF47413	lambda repressor-like DNA-binding domains
RHE_PF00211	SSF53822	Periplasmic binding protein-like I
RHE_PF00212	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00213	SSF109709	KorB DNA-binding domain-like
RHE_PF00213	SSF110849	ParB/Sulfiredoxin
RHE_PF00214	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00215	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RHE_PF00216	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00217	SSF53822	Periplasmic binding protein-like I
RHE_PF00218	SSF47413	lambda repressor-like DNA-binding domains
RHE_PF00218	SSF53822	Periplasmic binding protein-like I
RHE_PF00220	SSF89447	AbrB/MazE/MraZ-like
RHE_PF00221	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00222	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_PF00222	SSF55785	PYP-like sensor domain (PAS domain)
RHE_PF00222	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_PF00223	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_PF00223	SSF52172	CheY-like
RHE_PF00224	SSF52172	CheY-like
RHE_PF00225	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_PF00225	SSF52172	CheY-like
RHE_PF00226	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00227	SSF55469	FMN-dependent nitroreductase-like
RHE_PF00228	SSF52218	Flavoproteins
RHE_PF00229	SSF51604	Enolase C-terminal domain-like
RHE_PF00229	SSF54826	Enolase N-terminal domain-like
RHE_PF00230	SSF51604	Enolase C-terminal domain-like
RHE_PF00230	SSF54826	Enolase N-terminal domain-like
RHE_PF00231	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00232	SSF161098	MetI-like
RHE_PF00233	SSF161098	MetI-like
RHE_PF00234	SSF53850	Periplasmic binding protein-like II
RHE_PF00235	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00235	SSF48008	GntR ligand-binding domain-like
RHE_PF00236	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00237	SSF63829	Calcium-dependent phosphotriesterase
RHE_PF00238	SSF51569	Aldolase
RHE_PF00239	SSF53850	Periplasmic binding protein-like II
RHE_PF00240	SSF161098	MetI-like
RHE_PF00241	SSF161098	MetI-like
RHE_PF00242	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00243	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00245	SSF103481	Multidrug resistance efflux transporter EmrE
RHE_PF00247	SSF56024	Phospholipase D/nuclease
RHE_PF00249	SSF56219	DNase I-like
RHE_PF00250	SSF158472	HAMP domain-like
RHE_PF00250	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RHE_PF00253	SSF51905	FAD/NAD(P)-binding domain
RHE_PF00254	SSF161098	MetI-like
RHE_PF00254	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00255	SSF53850	Periplasmic binding protein-like II
RHE_PF00256	SSF47413	lambda repressor-like DNA-binding domains
RHE_PF00256	SSF53822	Periplasmic binding protein-like I
RHE_PF00262	SSF51445	(Trans)glycosidases
RHE_PF00263	SSF51445	(Trans)glycosidases
RHE_PF00263	SSF81296	E set domains
RHE_PF00264	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_PF00264	SSF52172	CheY-like
RHE_PF00264	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_PF00265	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_PF00265	SSF52172	CheY-like
RHE_PF00265	SSF55781	GAF domain-like
RHE_PF00265	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_PF00265	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RHE_PF00268	SSF53474	alpha/beta-Hydrolases
RHE_PF00269	SSF53807	"Helical backbone" metal receptor
RHE_PF00270	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RHE_PF00271	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00272	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00272	SSF54909	Dimeric alpha+beta barrel
RHE_PF00273	SSF53383	PLP-dependent transferases
RHE_PF00274	SSF52467	DHS-like NAD/FAD-binding domain
RHE_PF00274	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RHE_PF00275	SSF51011	Glycosyl hydrolase domain
RHE_PF00275	SSF51445	(Trans)glycosidases
RHE_PF00275	SSF81296	E set domains
RHE_PF00276	SSF51011	Glycosyl hydrolase domain
RHE_PF00276	SSF51445	(Trans)glycosidases
RHE_PF00276	SSF56112	Protein kinase-like (PK-like)
RHE_PF00277	SSF51445	(Trans)glycosidases
RHE_PF00279	SSF56281	Metallo-hydrolase/oxidoreductase
RHE_PF00280	SSF56112	Protein kinase-like (PK-like)
RHE_PF00281	SSF143865	CorA soluble domain-like
RHE_PF00281	SSF144083	Magnesium transport protein CorA, transmembrane region
RHE_PF00283	SSF53474	alpha/beta-Hydrolases
RHE_PF00284	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RHE_PF00284	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RHE_PF00284	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RHE_PF00285	SSF111369	HlyD-like secretion proteins
RHE_PF00286	SSF111369	HlyD-like secretion proteins
RHE_PF00287	SSF46689	Homeodomain-like
RHE_PF00287	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_PF00288	SSF47413	lambda repressor-like DNA-binding domains
RHE_PF00288	SSF53822	Periplasmic binding protein-like I
RHE_PF00289	SSF46689	Homeodomain-like
RHE_PF00290	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00290	SSF53067	Actin-like ATPase domain
RHE_PF00291	SSF161098	MetI-like
RHE_PF00292	SSF160964	MalF N-terminal region-like
RHE_PF00292	SSF161098	MetI-like
RHE_PF00293	SSF50331	MOP-like
RHE_PF00293	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00294	SSF51126	Pectin lyase-like
RHE_PF00295	SSF48208	Six-hairpin glycosidases
RHE_PF00297	SSF53850	Periplasmic binding protein-like II
RHE_PF00299	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RHE_PF00300	SSF53822	Periplasmic binding protein-like I
RHE_PF00301	SSF161098	MetI-like
RHE_PF00302	SSF161098	MetI-like
RHE_PF00303	SSF53850	Periplasmic binding protein-like II
RHE_PF00304	SSF51445	(Trans)glycosidases
RHE_PF00305	SSF47413	lambda repressor-like DNA-binding domains
RHE_PF00305	SSF53822	Periplasmic binding protein-like I
RHE_PF00306	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00306	SSF48008	GntR ligand-binding domain-like
RHE_PF00307	SSF53850	Periplasmic binding protein-like II
RHE_PF00308	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00309	SSF161098	MetI-like
RHE_PF00310	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_PF00310	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_PF00311	SSF52172	CheY-like
RHE_PF00312	SSF52499	Isochorismatase-like hydrolases
RHE_PF00313	SSF46689	Homeodomain-like
RHE_PF00313	SSF52317	Class I glutamine amidotransferase-like
RHE_PF00314	SSF49785	Galactose-binding domain-like
RHE_PF00315	SSF48230	Chondroitin AC/alginate lyase
RHE_PF00316	SSF161098	MetI-like
RHE_PF00317	SSF161098	MetI-like
RHE_PF00318	SSF48208	Six-hairpin glycosidases
RHE_PF00319	SSF50331	MOP-like
RHE_PF00319	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00321	SSF53850	Periplasmic binding protein-like II
RHE_PF00323	SSF53254	Phosphoglycerate mutase-like
RHE_PF00324	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_PF00324	SSF52172	CheY-like
RHE_PF00324	SSF55785	PYP-like sensor domain (PAS domain)
RHE_PF00324	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_PF00325	SSF109604	HD-domain/PDEase-like
RHE_PF00329	SSF50129	GroES-like
RHE_PF00330	SSF48592	GroEL equatorial domain-like
RHE_PF00330	SSF52029	GroEL apical domain-like
RHE_PF00330	SSF54849	GroEL-intermediate domain like
RHE_PF00331	SSF54631	CBS-domain pair
RHE_PF00332	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00332	SSF53850	Periplasmic binding protein-like II
RHE_PF00334	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_PF00335	SSF53187	Zn-dependent exopeptidases
RHE_PF00335	SSF55031	Bacterial exopeptidase dimerisation domain
RHE_PF00336	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00338	SSF53720	ALDH-like
RHE_PF00339	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RHE_PF00340	SSF53720	ALDH-like
RHE_PF00341	SSF51905	FAD/NAD(P)-binding domain
RHE_PF00342	SSF56784	HAD-like
RHE_PF00343	SSF53639	AraD/HMP-PK domain-like
RHE_PF00344	SSF53822	Periplasmic binding protein-like I
RHE_PF00345	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RHE_PF00345	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00346	SSF51658	Xylose isomerase-like
RHE_PF00347	SSF142764	YgbK-like
RHE_PF00348	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_PF00349	SSF53383	PLP-dependent transferases
RHE_PF00350	SSF56784	HAD-like
RHE_PF00351	SSF53850	Periplasmic binding protein-like II
RHE_PF00352	SSF161098	MetI-like
RHE_PF00353	SSF161098	MetI-like
RHE_PF00354	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00356	SSF51905	FAD/NAD(P)-binding domain
RHE_PF00357	SSF51905	FAD/NAD(P)-binding domain
RHE_PF00357	SSF54373	FAD-linked reductases, C-terminal domain
RHE_PF00358	SSF51905	FAD/NAD(P)-binding domain
RHE_PF00359	SSF53720	ALDH-like
RHE_PF00360	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00360	SSF54909	Dimeric alpha+beta barrel
RHE_PF00361	SSF51905	FAD/NAD(P)-binding domain
RHE_PF00362	SSF158472	HAMP domain-like
RHE_PF00362	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RHE_PF00363	SSF53474	alpha/beta-Hydrolases
RHE_PF00364	SSF53720	ALDH-like
RHE_PF00365	SSF56796	Dehydroquinate synthase-like
RHE_PF00366	SSF89733	L-sulfolactate dehydrogenase-like
RHE_PF00367	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00367	SSF48008	GntR ligand-binding domain-like
RHE_PF00368	SSF52317	Class I glutamine amidotransferase-like
RHE_PF00369	SSF53092	Creatinase/prolidase N-terminal domain
RHE_PF00369	SSF55920	Creatinase/aminopeptidase
RHE_PF00370	SSF51182	RmlC-like cupins
RHE_PF00371	SSF51621	Phosphoenolpyruvate/pyruvate domain
RHE_PF00373	SSF46689	Homeodomain-like
RHE_PF00374	SSF53850	Periplasmic binding protein-like II
RHE_PF00375	SSF160964	MalF N-terminal region-like
RHE_PF00375	SSF161098	MetI-like
RHE_PF00376	SSF161098	MetI-like
RHE_PF00377	SSF50331	MOP-like
RHE_PF00377	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00378	SSF50331	MOP-like
RHE_PF00378	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00379	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00379	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RHE_PF00380	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00380	SSF48008	GntR ligand-binding domain-like
RHE_PF00381	SSF51604	Enolase C-terminal domain-like
RHE_PF00381	SSF54826	Enolase N-terminal domain-like
RHE_PF00382	SSF51658	Xylose isomerase-like
RHE_PF00383	SSF51658	Xylose isomerase-like
RHE_PF00384	SSF51730	FAD-linked oxidoreductase
RHE_PF00384	SSF53720	ALDH-like
RHE_PF00384	SSF81935	N-terminal domain of bifunctional PutA protein
RHE_PF00385	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00385	SSF54909	Dimeric alpha+beta barrel
RHE_PF00386	SSF51161	Trimeric LpxA-like enzymes
RHE_PF00387	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00387	SSF53850	Periplasmic binding protein-like II
RHE_PF00388	SSF50022	ISP domain
RHE_PF00388	SSF55961	Bet v1-like
RHE_PF00389	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
RHE_PF00389	SSF54292	2Fe-2S ferredoxin-like
RHE_PF00389	SSF63380	Riboflavin synthase domain-like
RHE_PF00390	SSF46689	Homeodomain-like
RHE_PF00390	SSF52317	Class I glutamine amidotransferase-like
RHE_PF00391	SSF54506	Diaminopimelate epimerase-like
RHE_PF00392	SSF161098	MetI-like
RHE_PF00393	SSF161098	MetI-like
RHE_PF00394	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00395	SSF53850	Periplasmic binding protein-like II
RHE_PF00396	SSF51905	FAD/NAD(P)-binding domain
RHE_PF00397	SSF53720	ALDH-like
RHE_PF00398	SSF51569	Aldolase
RHE_PF00399	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00399	SSF48008	GntR ligand-binding domain-like
RHE_PF00400	SSF51316	Mss4-like
RHE_PF00401	SSF53474	alpha/beta-Hydrolases
RHE_PF00402	SSF50129	GroES-like
RHE_PF00402	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00404	SSF52402	Adenine nucleotide alpha hydrolases-like
RHE_PF00404	SSF52467	DHS-like NAD/FAD-binding domain
RHE_PF00405	SSF52402	Adenine nucleotide alpha hydrolases-like
RHE_PF00406	SSF51182	RmlC-like cupins
RHE_PF00407	SSF51395	FMN-linked oxidoreductases
RHE_PF00407	SSF51905	FAD/NAD(P)-binding domain
RHE_PF00408	SSF46689	Homeodomain-like
RHE_PF00409	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RHE_PF00409	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00410	SSF53850	Periplasmic binding protein-like II
RHE_PF00411	SSF161098	MetI-like
RHE_PF00412	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00412	SSF54631	CBS-domain pair
RHE_PF00414	SSF46689	Homeodomain-like
RHE_PF00416	SSF50692	ADC-like
RHE_PF00416	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
RHE_PF00417	SSF55073	Nucleotide cyclase
RHE_PF00417	SSF55785	PYP-like sensor domain (PAS domain)
RHE_PF00418	SSF51430	NAD(P)-linked oxidoreductase
RHE_PF00421	SSF49503	Cupredoxins
RHE_PF00422	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RHE_PF00422	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RHE_PF00428	SSF89733	L-sulfolactate dehydrogenase-like
RHE_PF00429	SSF48008	GntR ligand-binding domain-like
RHE_PF00430	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00433	SSF47413	lambda repressor-like DNA-binding domains
RHE_PF00433	SSF51182	RmlC-like cupins
RHE_PF00434	SSF53383	PLP-dependent transferases
RHE_PF00435	SSF46689	Homeodomain-like
RHE_PF00436	SSF51905	FAD/NAD(P)-binding domain
RHE_PF00436	SSF54373	FAD-linked reductases, C-terminal domain
RHE_PF00437	SSF50621	Alanine racemase C-terminal domain-like
RHE_PF00437	SSF51419	PLP-binding barrel
RHE_PF00438	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00438	SSF54909	Dimeric alpha+beta barrel
RHE_PF00439	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_PF00439	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
RHE_PF00440	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_PF00441	SSF47413	lambda repressor-like DNA-binding domains
RHE_PF00442	SSF48208	Six-hairpin glycosidases
RHE_PF00443	SSF51905	FAD/NAD(P)-binding domain
RHE_PF00444	SSF47240	Ferritin-like
RHE_PF00446	SSF51658	Xylose isomerase-like
RHE_PF00447	SSF51658	Xylose isomerase-like
RHE_PF00448	SSF56281	Metallo-hydrolase/oxidoreductase
RHE_PF00449	SSF52467	DHS-like NAD/FAD-binding domain
RHE_PF00449	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RHE_PF00450	SSF141868	EAL domain-like
RHE_PF00450	SSF55073	Nucleotide cyclase
RHE_PF00450	SSF55785	PYP-like sensor domain (PAS domain)
RHE_PF00451	SSF158472	HAMP domain-like
RHE_PF00451	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RHE_PF00452	SSF53850	Periplasmic binding protein-like II
RHE_PF00453	SSF161098	MetI-like
RHE_PF00454	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00455	SSF56214	4'-phosphopantetheinyl transferase
RHE_PF00456	SSF51905	FAD/NAD(P)-binding domain
RHE_PF00457	SSF47336	ACP-like
RHE_PF00457	SSF52777	CoA-dependent acyltransferases
RHE_PF00457	SSF53474	alpha/beta-Hydrolases
RHE_PF00457	SSF56801	Acetyl-CoA synthetase-like
RHE_PF00458	SSF160582	MbtH-like
RHE_PF00459	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_PF00461	SSF53383	PLP-dependent transferases
RHE_PF00462	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RHE_PF00462	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RHE_PF00463	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RHE_PF00464	SSF53807	"Helical backbone" metal receptor
RHE_PF00465	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RHE_PF00466	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00467	SSF46689	Homeodomain-like
RHE_PF00467	SSF51182	RmlC-like cupins
RHE_PF00469	SSF56935	Porins
RHE_PF00470	SSF141523	L,D-transpeptidase catalytic domain-like
RHE_PF00471	SSF103088	OmpA-like
RHE_PF00472	SSF49764	HSP20-like chaperones
RHE_PF00473	SSF51445	(Trans)glycosidases
RHE_PF00473	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
RHE_PF00473	SSF56988	Anthrax protective antigen
RHE_PF00474	SSF46689	Homeodomain-like
RHE_PF00474	SSF48498	Tetracyclin repressor-like, C-terminal domain
RHE_PF00475	SSF53474	alpha/beta-Hydrolases
RHE_PF00476	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00476	SSF53850	Periplasmic binding protein-like II
RHE_PF00479	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_PF00479	SSF52172	CheY-like
RHE_PF00480	SSF55781	GAF domain-like
RHE_PF00480	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_PF00481	SSF53822	Periplasmic binding protein-like I
RHE_PF00482	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00485	SSF63829	Calcium-dependent phosphotriesterase
RHE_PF00487	SSF74650	Galactose mutarotase-like
RHE_PF00487	SSF88688	Families 57/38 glycoside transferase middle domain
RHE_PF00487	SSF88713	Glycoside hydrolase/deacetylase
RHE_PF00489	SSF53383	PLP-dependent transferases
RHE_PF00490	SSF54631	CBS-domain pair
RHE_PF00495	SSF143081	BB1717-like
RHE_PF00497	SSF82093	Heme chaperone CcmE
RHE_PF00498	SSF48452	TPR-like
RHE_PF00499	SSF51206	cAMP-binding domain-like
RHE_PF00501	SSF55008	HMA, heavy metal-associated domain
RHE_PF00501	SSF56784	HAD-like
RHE_PF00501	SSF81653	Calcium ATPase, transduction domain A
RHE_PF00501	SSF81665	Calcium ATPase, transmembrane domain M
RHE_PF00503	SSF54862	4Fe-4S ferredoxins
RHE_PF00504	SSF46626	Cytochrome c
RHE_PF00506	SSF46626	Cytochrome c
RHE_PF00507	SSF81442	Cytochrome c oxidase subunit I-like
RHE_PF00508	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00508	SSF51206	cAMP-binding domain-like
RHE_PF00509	SSF47384	Homodimeric domain of signal transducing histidine kinase
RHE_PF00509	SSF52172	CheY-like
RHE_PF00509	SSF55785	PYP-like sensor domain (PAS domain)
RHE_PF00509	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RHE_PF00510	SSF49503	Cupredoxins
RHE_PF00512	SSF81296	E set domains
RHE_PF00514	SSF81452	Cytochrome c oxidase subunit III-like
RHE_PF00515	SSF46626	Cytochrome c
RHE_PF00516	SSF81442	Cytochrome c oxidase subunit I-like
RHE_PF00517	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00518	SSF53300	vWA-like
RHE_PF00519	SSF102114	Radical SAM enzymes
RHE_PF00522	SSF64307	SirA-like
RHE_PF00523	SSF117916	Fe-S cluster assembly (FSCA) domain-like
RHE_PF00525	SSF49503	Cupredoxins
RHE_PF00526	SSF56436	C-type lectin-like
RHE_PF00527	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00527	SSF51206	cAMP-binding domain-like
RHE_PF00530	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_PF00530	SSF52172	CheY-like
RHE_PF00531	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_PF00532	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_PF00532	SSF48452	TPR-like
RHE_PF00532	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00533	SSF46894	C-terminal effector domain of the bipartite response regulators
RHE_PF00533	SSF52172	CheY-like
RHE_PF00534	SSF53720	ALDH-like
RHE_PF00536	SSF53474	alpha/beta-Hydrolases
RHE_PF00537	SSF54427	NTF2-like
RHE_PF00538	SSF52317	Class I glutamine amidotransferase-like
RHE_PF00539	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
RHE_PF00540	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00541	SSF55298	YjgF-like
RHE_PF00542	SSF52096	ClpP/crotonase
RHE_PF00544	SSF52499	Isochorismatase-like hydrolases
RHE_PF00545	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RHE_PF00546	SSF53474	alpha/beta-Hydrolases
RHE_PF00547	SSF52172	CheY-like
RHE_PF00548	SSF52172	CheY-like
RHE_PF00550	SSF103473	MFS general substrate transporter
RHE_PF00551	SSF111369	HlyD-like secretion proteins
RHE_PF00552	SSF50692	ADC-like
RHE_PF00555	SSF88723	PIN domain-like
RHE_PF00557	SSF52833	Thioredoxin-like
RHE_PF00558	SSF111337	QueA-like
RHE_PF00559	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00560	SSF46955	Putative DNA-binding domain
RHE_PF00561	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00563	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00563	SSF53067	Actin-like ATPase domain
RHE_PF00564	SSF51735	NAD(P)-binding Rossmann-fold domains
RHE_PF00564	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RHE_PF00565	SSF53850	Periplasmic binding protein-like II
RHE_PF00566	SSF161098	MetI-like
RHE_PF00567	SSF161098	MetI-like
RHE_PF00568	SSF46785	"Winged helix" DNA-binding domain
RHE_PF00568	SSF53067	Actin-like ATPase domain
RHE_PF00569	SSF51658	Xylose isomerase-like
RHE_PF00570	SSF50331	MOP-like
RHE_PF00570	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00571	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RHE_PF00572	SSF109709	KorB DNA-binding domain-like
RHE_PF00572	SSF110849	ParB/Sulfiredoxin
RHE_PF00573	SSF46785	"Winged helix" DNA-binding domain