        repA NONE
        repB    2225 ..    2241 +  -4.3  -3.02109   AAAAAGCCTCCGAAC              GTTGCCG TCG CGGAAGC              CTTTCTCATATCTGG  46 52
        repC    3696 ..    3720 +  -2.9  -2.91276   CATGTCATACATGGC          GGAAGGAAA CACGTAT TTTGCTTCC          ATTTGTGAAAAACCG  42 154
   pRL110004    5172 ..    5191 + -10.6  -3.54109   TCAGGTAGAGCGAGA            GCGCGCCG AAGA CGGCGAGC             TTCTGGTTCGATTCC  70 316
   pRL110008    7631 ..    7643 +  -9.1  -3.75169   CAGGTCTCGCCTGAA                GCGAG GCG CTCGC                TTTCCTGAAATGGTC  71 43
   pRL110014   22224 ..   22236 +  -2.6  -4.47328   CAGTCTATTTCATAA                CGCC CTTCA GGTG                TTTTCTCGTCCCCTT  65 366
   pRL110018   25424 ..   25434 +  -3.2  -3.55444   CGATTGAATATCGGC                 TGGC CGC GCTA                 TTTACCCGATCCCCA  50 110
   pRL110019   27047 ..   27058 +  -2.2  -4.62872   CCGCAGGTTCTATCC                GGTA GTGT TGCC                 TTTTTGGCAATTCAT  65 305
   pRL110020 NONE
   pRL110021 NONE
   pRL110022 NONE
   pRL110023 NONE
   pRL110024 NONE
        caiD NONE
   pRL110026 NONE
   pRL110027   35587 ..   35597 +  -2.4  -3.74658   CGATCTTTCAGATTC                 GCTC CTC GCGC                 TTTAGGTCCTTGTTT  51 67
   pRL110035   44918 ..   44931 +  -5.2  -3.74693   AACCTCTTGCCACCT               GCGC CATTTA GCGC                TTTCATACACTACCA  59 162
   pRL110036   46531 ..   46549 +    -3  -3.53811   ACTCGCAGGTCAAGG             CCGTCTGA AAT TCGGGCCG             TTTCGGAACCATCCA  48 18
   pRL110037   48847 ..   48874 + -12.1  -2.72344   GCTCCGTCATCCGCA        TCA-GCCCGGTG ATCTC CACCGGGCCTGA        TGGTTGCCCCTCGCG  66 337
   pRL110043   55332 ..   55355 + -16.8  -5.08255   CACACACACAAACGG          GCCTGCATGG GAAA CCATGCAGGC           TTTTGTTTTCGGGCT 100 62
   pRL110044 NONE
   pRL110045   56694 ..   56716 +    -9  -3.09492   GTTCCAATCCCCTGA           CGCAGGGTCC GCA GGACCAGGCG           TCTTCAAATTCCGAG  63 521
   pRL110056   72691 ..   72705 +  -2.8  -5.29445   GCTACGGCCTCTTAT               GCTG ATCCGCG CAGC               TTTTTGTTGTTAAGG  81 76
   pRL110057   73214 ..   73236 +   -12  -4.91852   CCAATGCGAGATCAG           CCCGTCGC CGTCAAA GCGACGGG           TTTGTTTTTCCTCCG 100 55
   pRL110059   75154 ..   75194 + -15.4  -3.46068   CAGCAATTCAAAGTG  CTACAGCGCCGCGGCTCT CGAAA AGACGCGCGGCGCTGTCG  TGTTTCGCTTCACGC  88 44
   pRL110062   79079 ..   79103 +  -9.2  -2.82635   CCCGCTGCACGAAGT          CCGCGTCCCG CAATC TGGGAAGCGG          TGTAATCGTCCGGAT  57 272
   pRL110067 NONE
   pRL110068   85178 ..   85215 +  -4.8  -3.06073   CCGAGCAGATGGAGT   TCGGCATCCGGCAGATC GCGCA GATAGGCCCGA-GCCGA   CTTTTCCGGCATGTA  47 137
   pRL110072 NONE
   pRL110073   89384 ..   89395 +  -2.2  -4.15044   TTTCGGAATTCCTTC                CGGA CGCA TCTG                 TTTCTTCAGAGCGGC  59 162
   pRL110075   92402 ..   92457 + -13.2  -2.66316   ACCACTCTTCCGTCA TGCTCGGGCTCGTCCCGGGCATCTAC GGCG GCAGATCCCCGGCACAAGGCCGAGGA TGATGTCCTCAAAGA  73 96
   pRL110076 NONE
   pRL110077 NONE
   pRL110078   94391 ..   94403 +  -3.3  -3.31144   CGACGCGGTCCAGCC                CGCCA ATA TGGAG                TTCTACCGATGACCA  46 58
   pRL110079   95192 ..   95204 +  -3.3  -2.57132   GGCGTCTCAAGGTCG                ATGCC TCT GGCAA                ATTATGGGAGCCGGC  40 41
   pRL110080 NONE
   pRL110081   97558 ..   97576 +  -6.7  -3.05596   CATCGAGCTCGGCCT             CGGCATC GTCCG GATGCTG             TTCCGTCACGCGATC  51 460
   pRL110083   98994 ..   99017 +    -3  -3.63627   CCAGACTTTCAGAAA          GTCCCTCACG ATGG CTTGGGAGAC           TTTCGGATCTAAAAC  50 50
        pcaQ  104683 ..  104696 +  -5.2  -3.89336   GATCCGCGAGGCGGC               GGGC GAGGCG GCCC                TTTAAATTTGCTTGA  62 7
   pRL110091  105275 ..  105287 +  -4.8  -4.07568   GCGGACATCGTCTTC                CGGT GAGTG ACCG                TTTTGCCGAGGCGCC  61 20
   pRL110092  106157 ..  106178 +  -9.3  -3.05816   CCCGGCACCTCGTCC           CGCGTGCCG AATT CGTCGCGCG            TTCCCTGGCAGATCA  60 234
   pRL110097  112762 ..  112801 +  -9.5  -2.63596   CCCTATTGCAATCCA GGATG-G-AGCTTCAGCCT TTAC ATGCTGAAGCTGCTCATCC  TACTGTCGCCTCAAA  62 116
        hsdM NONE
        hsdS NONE
   pRL110100 NONE
        hsdR  120724 ..  120738 +  -7.8  -3.57263   GCGCCTCCTCGACCG               GATCGG GCG CCGGTC               TTTCGCGATCCCGCT  62 523
   pRL110105  123592 ..  123607 +  -7.6  -3.32647   ATCTGCTGCGAGATA              GATCGA CTCC TCGATC               TTAGTATCGTTCGAG  59 161
  pRL110108A  126691 ..  126723 +  -6.2  -3.32022   GAAGAAGGTCGAGGC     CG-AGATTGACCGCC GTTA GGCGGTCGAACGACG      TTGCTCTGTCCACGG  54 7
   pRL110109 NONE
   pRL110110 NONE
   pRL110111 NONE
   pRL110112 NONE
   pRL110113  131241 ..  131251 +  -5.4   -2.9621   GGAATGCATTGTGGC                 GTTG CTA CAAC                 TACTTTGCATATGCT  48 362
  pRL110113A  131853 ..  131876 +  -6.6  -2.75481   TATTCACCAAAAAAA          GCCCCGCCTT AGGT AAGACGAGGC           TAGTTGGGATTGCGG  51 42
   pRL110115  134061 ..  134085 +  -2.8  -3.71487   TGCGCGTCATGCCGA         GCTC-GCCGGA TAGA TCTCGCAGAGC          TTCTTCCATATCATC  54 458
   pRL110128  141254 ..  141264 +  -2.4  -3.07113   GCATCATGCAGAACG                 CGCG CAT CGCC                 TTCGCTCGACTGCTG  42 46
   pRL110129  141617 ..  141636 +    -7  -3.16564   GGACCGCCAACAAAA            CGGCGCGG GAAG CGGCGTCG             TTAGTCAACTCCAGC  54 2
   pRL110130  142647 ..  142680 +  -5.3  -4.25104   ATCGCGGCCGTGACC     GCCTTGGTCATACAGG TGG CCGG-ATGATCAACGC     TTTTGATCAGAAGGC  68 335
   pRL110132  144318 ..  144330 +  -4.1  -3.31365   TTACCCTACATTTCT                CAAGC GAT GTTTG                TATTGTGCTGTCATC  48 136
   pRL110133  147352 ..  147373 +  -3.7  -3.22475   CCACGATTCACTGGC           TGGT-GACCG TGT TGGTCTGCCA           TCTTCTGCCCGTCGC  48 81
   pRL110134 NONE
   pRL110135  148739 ..  148753 +  -3.4  -3.05463   GCAAAGAGTGGGCCG               CGGCCG CGC CAGTCG               TTGGCTGACCGCCCT  43 3
         cpo  149839 ..  149864 +  -5.9  -2.90723   TCATCAAGGGCTGAC         CGCCGGGCGGG CCGC CCCGCGAGGCC          TGTCCTTCGACCTCC  51 27
   pRL110137  150960 ..  150987 +  -9.1  -2.76696   TACCCCTGGCGCGCC        TCCGGGACGTC TCGAGT GGCGTCCTGGG         CTTGTTCACAGACCC  60 84
   pRL110138  151450 ..  151464 +  -4.2  -3.77666   GCAGGGCTTCGTCAA               GATCAC CGA GTGACC               TTTGGGTTCCCTATC  57 13
   pRL110139  152780 ..  152804 +  -2.7  -3.93664   GTTAAGCACTTGGGG          CGCCTGGTTTG AGA CAAAGCTGGCC          TTTGCTATATTCGCT  56 160
   pRL110146  158477 ..  158492 +  -3.2  -3.47227   GAGCATGTTCGGGAC              GATGGC TCAT GTCGTC               TTATACTCCTTGAGC  48 39
   pRL110147  159937 ..  159961 +  -7.7  -4.43477   GCACGACGATAAAAA          GCGGGCCACTG AGA TAGCGGCCAGC          TTTTGGTTAAATGGC  77 268
   pRL110157  169929 ..  169954 + -19.1  -4.03586   TCTGATAACTCAAAA         TGCCGGCGTGA CCCG TCACGCCGGCA          TTATTGTGTTTGGCG 100 36
   pRL110158 NONE
   pRL110159  171987 ..  172008 +  -2.9  -3.57144   GTGCCTAAACTTTTT           GTCGAGCCA ACGA TAGCTCAAC            TTTCAGCATCAAGGC  50 33
   pRL110165  179329 ..  179350 +  -7.3  -3.78934   GTCGCCGATCGGCTG           CGCCGGCTGT TCG ATA-CCGGCG           TTGTTGTGGGCCGCG  65 516
   pRL110170  185055 ..  185071 +  -7.9  -3.02829   CTGTCACACCCGGCT              TCGCGCC TAC GTCGCGA              TCTTGCAAGCCTCTA  56 46
   pRL110171  186395 ..  186405 +  -2.4  -2.88822   AGAACACGAGGATCG                 CCGG ATA CAGG                 TACTTGTATGGAAGC  40 404
   pRL110177  192686 ..  192708 + -14.1  -4.78848   CAAGGCACTTTTGGA           GGGCTCGGC AGATC GCCGGGCCC           TTTTGTATTTGAAAC 100 52
   pRL110178  193571 ..  193586 +  -4.6  -3.94333   GTCGCGGTCGACGGA              GGCCAG ACCG CTTGCC               TTTGATCTGTTGGTG  59 5
   pRL110179 NONE
   pRL110180  195979 ..  195991 +  -6.2  -3.85698   CGAAAGTCCGCATAG                CCCG CGACA CGGG                TTTCTCCCGGGGGCG  61 26
   pRL110181  197063 ..  197095 +  -9.2  -2.64561   ACGGCTGACCTTTGA     ATGGCGTGT-CG-GGC AAT GCCGCGGACACGCCAA     CTGTCTTTATTCCAC  59 33
  pRL110181A NONE
   pRL110182 NONE
   pRL110183  198898 ..  198915 +  -4.1  -3.05816   GGGCCTAAGGAACTC             GC-CCTCT ATC AGGGGAGC             TTAGATGGACGATGG  46 4
   pRL110189 NONE
   pRL110190  204408 ..  204420 +  -4.7  -3.05384   TGGACAAGAGGCTCG                GCCGG ACT CAGGC                TTGGGTGCCAAGGCG  47 138
   pRL110191  205616 ..  205631 +  -8.2  -3.01712   AATGCAGCGTGGTTG              CGGGCG TGGT CGTCCG               TATTGCCGCACAGGA  57 448
  pRL110193A  207925 ..  207939 +  -4.2   -3.5627   CGCTGGCGATGCTGA               GGCG ACTGAAG CGCC               TTTAAGAAATGGTCT  54 460
   pRL110194  208299 ..  208321 +  -4.8  -3.53224   CGACGAAGCTGGCAT           TTCGGTGATC ACC GTTCACTGAG           TTTCCGCCGCCGGTG  52 4
   pRL110198  211049 ..  211067 +    -3   -3.1886   CATTCAAACGCGAGG             TCGTGCCC GCG GAGCATGG             TTGATGCGCTTCGAT  43 3
   pRL110199  212044 ..  212056 +  -5.5  -4.13767   AGCGAATATTTTCCG                TCGGC TCT GTCGA                TTTTCGCCTCAGCCG  64 324
   pRL110200  212963 ..  213008 + -11.8  -2.64155   GATGTCGTAGACATA GCCGGAGATCATGTCGGCGG CGCGTT CCGTCGCCTTGATCTTCGCC TCGGTTTCCGAGACC  65 139
   pRL110207 NONE
   pRL110208  222188 ..  222222 +  -3.5  -3.63073   GGTCTTCCACCGCCT    CGGGGCCGAGAACCTT TTCG AGGGCTTTCA-CCCCG     TTCTTGGGCAGTCTC  51 332
   pRL110211  225408 ..  225449 +  -9.8  -3.35679   GACAGCATGCTCGAA CAGGA-T--GATTTTAGGCCG GGT CGGCCTAAAATCTGAATCCTG TTCTCAATAAGAGAG  68 91
   pRL110212 NONE
   pRL110213  226981 ..  227005 +  -5.5  -3.34488   CACCGCCGCGCGGCC          CCGCAGGCGCT GAA GGCGTGAGCGG          CTTTTTGACCCGATT  52 5
   pRL110214 NONE
       hutH2  229296 ..  229310 +  -3.5  -3.62859   GCCGCTATGATCGGC               CTCAG AACGG CTGGG               TTTCGGAATTCTGCT  52 31
   pRL110222 NONE
   pRL110223 NONE
   pRL110224  240673 ..  240688 + -10.4  -3.30443   TATTTCGTGCTGGCT              CGCCTC TTCC GAGGCG               TTCATGTACTCGTCG  70 329
   pRL110225  241034 ..  241050 +  -5.1  -3.10975   TCCTCTCGGCAGCGT              CCTTGAT TGC AGCAAGG              TCTTGAATCCTGGCT  50 114
   pRL110226 NONE
   pRL110227 NONE
   pRL110228  243122 ..  243137 +  -3.2  -3.35813   CGACAGCTCGCATTG              CAGTGC CGAG GCAATG               TTGATTGGCGTCCAG  46 266
   pRL110238  254597 ..  254618 +  -9.5  -3.95071   GCATGTTGTGAGCCC           TGGAATGGG CACG CCTATTCCA            TTCTTTCGACCTTTA  77 149
   pRL110240  256082 ..  256115 +  -6.5  -4.14392   CGCGCGGCTGAGGCC     GACGATGCCGGCAAG CTCG CTGACCGGCAGCGGC      TTTTCGAGATTGGCG  69 316
   pRL110242  258349 ..  258370 +  -8.7  -2.85545   GCTGCGCGCGGAAAA           GGCGGCGCTG AAA CAG-GCCGTC           TGATGTTCTTGAAGG  60 1
   pRL110243  260613 ..  260623 +  -2.4  -2.78384   GAAACAAAGAGTCAA                 AGCG CGT CGCA                 TGTGATGCGACGCGC  39 54
   pRL110244 NONE
   pRL110245  262899 ..  262909 +  -3.2  -2.82023   CGCGACGCGGTCGAT                 CCTT ATT GAGG                 TGATTGATATGGCTC  41 17
   pRL110246 NONE
   pRL110247  266006 ..  266032 + -19.4  -4.39571   GGTAGGCGTCAAGAA         GCCCCGCGGTCG CAA CAACCGCGGGGC         TTTTGCGTTTGTGGG 100 53
  pRL110257A NONE
  pRL110257B  280037 ..  280064 +    -4    -3.794   GGGCTTCTGGGATTG        GAGACGTCTGTG CTAC CTCAGAGGCCTC         TTTGCTGCGTTCGCA  55 41
   pRL110258  280595 ..  280605 +  -6.8  -3.52113   TTGGTTCGTCGCAAA                 CAGC CAG GCTG                 TGTTTCTAAAGCGGT  58 164
  pRL110260A NONE
   pRL110261  284928 ..  284949 +  -2.9  -3.53012   AACCTTCCTGCCGGA           TAAACCCGA CAGA TCGGGCTGA            TTTAACAGCGGGCAA  48 230
   pRL110262 NONE
   pRL110263 NONE
   pRL110264 NONE
   pRL110265  289610 ..  289636 +  -6.4  -3.54424   TCTCCATGATCAATG         GCCCCATCGCGG CGC CCGCCATCCGGC         TTTCAGCGCCTGGGC  58 32
   pRL110269  293121 ..  293132 +  -7.2  -3.62096   TGCCAGGCTCGCGCC                GCCG GCAA CGGC                 TTTGCCGTCCTCCAC  63 281
   pRL110270  294425 ..  294435 +  -4.6  -2.78384   TCGATGTAGAGGTGA                 CGGG GCT CTCG                 TGTCATGCCGGCAGG  44 283
   pRL110272 NONE
   pRL110273  296590 ..  296605 +  -7.6  -2.95298   TTCATCGGGGTGATG              TGAACC GCCT GGTTCA               TCTCTCCTGCCTGGC  56 115
        traA  302548 ..  302569 +  -5.8  -3.90588   CCCATCACGAAGAGA           TCGCG-CCG AGTGA CGGACGCGG           TTTAATTGCCGCATC  64 416
   pRL110285  314680 ..  314713 + -18.9  -3.41798   GTCGCATTGATCGAT     TGCGAGCGGCCCCGGC ACT GGCGGGGCCGCTC-CA     TCTCTTATTTTACGC 100 31
        pcaI NONE
        pcaJ NONE
        pcaF  318409 ..  318422 +  -2.3  -3.04517   GAAAGGGTTTGAGGT               CGGGA CGCT TCCAG                CTTTTGCCGGAGGCT  41 29
   pRL110290  319084 ..  319124 + -10.4  -2.60496   AAGCTGATTCCCAAA GCGGCAGGTTCA-CGTCGT GTAG ACAGCGTTGTGCCTGCCGC  CTCTTTGACCCCAAA  64 145
   pRL110298  328574 ..  328623 +  -2.3  -2.88544   CGGCCCAAACGTCTT GAGATCGCGGGCGCGAAATGCGGTA GGCT TGCCGCAT---GCGTC-GCGATCAC TCTGTCGGCATGGAG  39 330
   pRL110299  330014 ..  330045 +  -2.8  -4.06892   ACAAATGGACGAGGA      CCAGCCGAACCGCA ATCA TTCGCATCCGCTGG       TTTGTGTGCCATTCT  58 175
   pRL110300 NONE
   pRL110301 NONE
   pRL110302 NONE
   pRL110303  336962 ..  336972 +  -2.4  -4.67038   TTTTCAGCAAGCGGG                 GCAC CAT GAGC                 TTTTCATTTTCGGAA  65 123
        glgX NONE
   pRL110305  340567 ..  340587 +  -7.6  -3.17075   AGGACGTGGCCTGGA           GCGCTG-TG ATTT CAGCAGCGC            TTGAATTGAAGGCGC  57 446
         cls NONE
   pRL110314  350391 ..  350423 +  -8.6  -3.92996   CCAGAGCTTTGCCAA     TGCTTCGATCCGCCTC GTT GAGGCG-A-CGAAGTA     TTCTTGTGTCTCCGG  71 398
  pRL110317A  354233 ..  354247 +  -8.6  -4.13995   CAACCGTCTCGCGAT               GACATC ATC GATGTC               TTTGATTTCTCGAGC  73 395
   pRL110320 NONE
   pRL110321  357046 ..  357071 + -13.3  -2.62184   TAAAGCAGAAACGAT         GATCTCGCCTC GGAT GGGGCGAGGTC          TGGTATAAGCGCACG  75 38
   pRL110322  358455 ..  358469 +  -3.6  -3.35679   CCATCTTGAAAGCCG               TTAACT TCG AGTTAG               TTATGCGTGACGGGA  48 222
   pRL110323  360219 ..  360243 + -11.3   -2.6914   CAAGCAAAACCTCAT          GGCGCGCGGGC CGC GTCTGCGAGCC          CTTGTCTCGCCACTC  67 439
   pRL110326 NONE
   pRL110327 NONE
   pRL110328  362040 ..  362058 + -11.7  -3.18912   GGCTGCGTGATCGGG             GAGGGCG ACGTC CGCCCTC             TTGCTGCCTAGATGA  71 31
   pRL110329  362911 ..  362923 +  -7.7  -3.06696   GCCGCAGCCTTGCGT                TCGAG CTC CTCGA                TGTGTTCGCGGGCGA  54 520
   pRL110332  366524 ..  366563 + -13.6  -3.23216   GCCTCAGACCTATGA  G-GTTCCGCGCTGACGGTT TGT AACCCCCGGCGCGGAACAC  TTGCTAATGCTGGCG  81 13
   pRL110333  367439 ..  367449 +  -6.8  -3.42996   TGAAGCCGACTGCGG                 TGGC CAC GCCA                 TTCTCGTCCCTGATC  57 380
   pRL110338  371693 ..  371718 +  -4.5  -3.12142   CAGCAACGGACGGAC         ACCCGCGACTG CTAG CTGTCGCCGGA          TATCTTGGCTGTCCC  47 401
   pRL110340 NONE
   pRL110341  374757 ..  374789 +  -5.4  -2.60075   TCCCGTGCACCCCGC     GGCGGCGCAGG-TCG ATAC CGCCCCTGCAACGCC      CTTCGTTGGAGCCGC  46 196
   pRL110343  376327 ..  376352 + -10.4  -3.41878   AACGCCAATAGCTCG         TCGCCTGCCC TGAACC GGCCAGGCGA          TTGTCCATTGAACGG  68 319
   pRL110353 NONE
   pRL110354  385792 ..  385808 +  -2.1   -2.8007   TGCTACAAGAGTTCC              CAACGCG GGC CGCTATG              TAGTTCATCAGTTCA  39 51
  pRL110354A  386708 ..  386735 + -10.6  -3.05715   TCGTCGGATGGTGAA        GCCGCAGTTA-CC CAA GGATAACCGCGGC        TTCAATCCCAAGATT  68 495
   pRL110356 NONE
   pRL110357  389663 ..  389678 +    -4  -2.74192   GCGGTTCCTAATCGG              CCG-TGA ACT TCAACGG              TCCTGTTGCCGGATC  43 44
   pRL110359 NONE
   pRL110361  391300 ..  391317 +  -3.3  -2.78715   CCTTTCTGATTGAGA             ATCCGTC GGAC GGCGGAA              TCTAGTCGAACACTT  41 28
   pRL110362 NONE
   pRL110363 NONE
   pRL110364  394674 ..  394705 + -18.7  -5.14563   ATAAGCGACGGATCG      ACGGCGGCGGCCT CAACAC AGGCCGCCGCCGC       TTTTTTGATGACACA 100 37
   pRL110365 NONE
   pRL110366 NONE
   pRL110367  397604 ..  397624 +    -9  -3.61774   CTGAATGGTCGGCGG            CCGGTAGC CTGAT GCTATCGG            TTTCGGCATATTGTC  68 37
   pRL110368  398473 ..  398484 +  -7.2  -2.95774   ATCTTTTGCCGCATC                GCCC ATGA GGGC                 TATATCGTGCGTGTG  56 81
        pepT  399854 ..  399870 +  -4.3  -3.53444   GGCGGTTGATTAACC              GCCGTTC GCC GGAAGGC              TTTCGCGCAGCATCA  52 127
        ropA  406154 ..  406175 + -12.9  -4.11183   GATTGCAGACGAGCG           GGCGCGACC TTCG GGCCGCGCC            TTATTTATGATGCCG  91 49
   pRL110382  416521 ..  416539 +  -5.2  -3.92324   CGCTACAGTGCTCCT             ATGAGTGC CTG GCGCTCAG             TTTCATCTTGCGAAA  62 43
   pRL110387  420937 ..  420955 +  -8.1  -3.38046   CAGGAAATCGATGAC            GGCG-CGC ACGC GCGGCGCC             TGTTTCAGGTCGCGA  60 131
   pRL110389  423617 ..  423636 +   -10  -3.81287   AGACCTAGCCACATA            CTCTTCCC GACA GGGGAGAG             TTTAGTCCTCCTCTC  75 40
   pRL110390  424488 ..  424501 +  -2.3  -3.90112   CTCGAGCAGGGCATG               TCCTG AGGT CTGGA                TTTGATTGGCGAGGC  54 20
   pRL110391 NONE
   pRL110392 NONE
   pRL110393 NONE
   pRL110394 NONE
   pRL110395 NONE
   pRL110396 NONE
   pRL110397  433158 ..  433168 +  -2.4  -3.57144   GCATATCGCTCGAAG                 GCGG AAA CCGA                 TTTCAAAATGAAAAC  48 141
   pRL110398  433484 ..  433501 +  -4.9  -3.89822   GAAACAGGGATTCCG             GCAGTGAA CTC TTCAC-GC             TTTCTCCAATCAATC  59 19
   pRL110399  434057 ..  434070 +  -5.9  -3.27994   AAATCGCACGCTCGA               TCGCC TTCC GGCGG                TTGATCTGACCTTCG  54 92
   pRL110400 NONE
   pRL110401 NONE
   pRL110402 NONE
   pRL110403 NONE
   pRL110404  439095 ..  439119 +  -4.2  -3.26471   ACCTCTTTCGGAAAA         GAGACG-GGCG GCGG CGCTGCGACTC          TTCCTCTCCCCGTGC  49 72
   pRL110405 NONE
   pRL110406  441940 ..  441952 +  -4.1  -5.03314   GGTGTTCCCCCGACG                GTGTT GAC AACGC                TTTTTTCGAGCTCCG  81 298
        rhaD  452151 ..  452163 +  -3.3  -3.55071   GCGGACAACGTCCAT                CGTAG CTC CTTCG                TTTGAAGACATGTAA  50 187
        rhaI  453562 ..  453613 + -10.1  -3.97368   AGCCATGCTGACGAG GGATGATGGCTGCCGGCAGCGC AGGGGTGAC GCGCTGCCGGCAACC-TCGCCG TTTATGGCTTCCAGG  77 67
   pRL110418  455077 ..  455114 + -13.3  -3.73402   AATTTACCGGATCTT   CGAGATAGGCGCGCTTC GCAA GGAGCGCGCCGCTCACG    TTTCCTGAGCGGTGT  88 52
   pRL110419  456953 ..  456989 +   -16  -3.76224   TCGCGGCCGCAGACC   TGCACGGTTTC-GCCGG CCTG CCGGCAGAGATCGTGCA    TTTCGTGGGTAGCGA  93 505
   pRL110421  458752 ..  458768 +  -9.5  -3.55444   CCGTCTCCAGGAGTT              GCTTGAA GTC TTCAAGC              TTTACGCCATCGGCG  68 326
   pRL110423  459582 ..  459592 +  -4.6   -3.9392   GCCAAGGCCTGCCAC                 GCGG CGA TCGC                 TTCTTTCGCCTGAGC  59 2
   pRL110424  460170 ..  460180 +  -2.4  -3.90762   CGGCTTCCTCGGCCG                 AGCG GAT CGCA                 TATTTTTCGGCCATC  54 319
   pRL110427  462320 ..  462332 +  -2.7  -4.21275   TTGCCGCCGAGGCGG                TTATC CGC GATGA                TTTTGCCTGAATTGG  61 3
   pRL110428  463363 ..  463391 + -14.7  -2.80074   TGTAGAAGAGGATTC        AGATTTTAGGCCG ACC CGGCCTAAAATCA        TCCTGTTCTAGCGCG  79 121
   pRL110430  466000 ..  466016 +    -3  -2.64218   ATCCGGAATATGTTC             GC-TCTC AGGA GAGAAGC              CTTGTCATGACCGAT  40 70
   pRL110431  466280 ..  466299 +  -2.1  -3.55622   CGCCGGAGAGGATGA            GCCG-GCA ACCCG TGCATGGC            TTTGAGGGAATTCGA  48 26
   pRL110432  467204 ..  467222 + -13.8  -3.66178   CGGCCAGCCAGATGA             CGTGGCGG GCG CCGCCGCG             TTTGCCGTTGGCGCG  81 61
   pRL110454  490985 ..  491018 + -14.6  -4.61482   AGAAGTAAACATCGC     CACCGATGCCGGCC CGCCGT GGCCGGTATCGGTC      TTCTTTTTTGCAGCA 100 33
   pRL110455 NONE
   pRL110456 NONE
   pRL110457 NONE
   pRL110458  494681 ..  494707 +  -6.5   -2.7035   CTTCGACGGTGCGCT        GCGCTGGCCGGA TTGA TCCG-CCGACGC         TCATCTGTCGCTAGA  50 10
   pRL110459  496863 ..  496889 +  -4.3  -3.11812   GGTCAAGTCGCCGGT         CGCGAGTTCCG CCTTC TGGAAGACGCG         TTCGATGGTCTCGAT  47 321
   pRL110461  498599 ..  498620 +  -7.9  -3.53091   TTCTGAAGGGAACGC           GGCGGTGCG GCTC CGCATCGAC            TTTCACGCGACGAAT  61 35
   pRL110462  499502 ..  499515 +  -2.3  -2.78935   CTACAAGGATGTCAA               CCGTC ACAT GACGC                TCTGGTAGGAGCTAT  39 4
   pRL110463 NONE
   pRL110464  500468 ..  500488 +   -14  -3.01001   AGAAGTGAGACAACT            GAGGCCGC GTTAG GCGGCCTC            TGTCATTTCCACATC  80 33
   pRL110466 NONE
   pRL110467 NONE
   pRL110468  503991 ..  504009 +  -6.6  -2.66634   CGGCTCGATGGCTTC             GCGCGCTG TTA CAACGTGC             TGGTCTGGTGGGGTG  48 432
   pRL110473 NONE
   pRL110474  508909 ..  508933 +  -2.8  -4.65895   GTTTTGGCCGCATGC         GCCATGGCC TTGTGCGC GGCCG-GGC          TTTTTCCCTGCGCAA  69 303
   pRL110483  519757 ..  519782 + -11.1  -2.52516   AAACCAGTCGACCGT         CCGCTGCCAGG CGAG CTTGGCAGCCG          CTTCGTCGTAGCGGG  62 125
   pRL110485 NONE
   pRL110486 NONE
   pRL110487 NONE
   pRL110488  525148 ..  525178 + -16.8  -3.28712   CTCTTTGGAACCTTT       GGGATCGCGGACGG CAA CAGCCCGCGATCCC       TTCTACAGCGCCGCA  90 43
   pRL110489  526624 ..  526665 +  -2.3  -5.08824   TTCCTTCCAGTTCGC GTCATGCTTCGCGGCCGCG TCATCT TGCG-CC-CAAAGCTTGAC TTTTTTGGCTGCGGC  77 193
   pRL110501 NONE
   pRL110502 NONE
   pRL110503  544617 ..  544634 +  -3.3  -3.14647   AGGAAGACGAGAGGG             GCAGGTT GTGA AGCCGGC              TTACGTCTGATCGAT  43 48
   pRL110504  545910 ..  545922 +  -3.3  -4.05788   TTCGTCTTGTGACAA                GGGTG ACG CACCA                TTTCCTTTGAAGGCG  58 80
   pRL110505 NONE
   pRL110507  549501 ..  549534 +  -9.5  -3.87373   GACCCGATATCGAGA     TCAGCTTGCCGCCCGG CTT CAGGACGGCGAGC-GA     TTTCTCCAGCGTCTC  74 434
   pRL110510  551752 ..  551783 + -10.1  -3.06133   AGAGCAGCGGCATCA      GTCCTGCGAGCGC CCTGAA GCGCTCCCACGAC       TTGGATGACGGCTTC  62 147
   pRL110518  560999 ..  561032 + -10.3  -2.68338   GGGGATGGAAATGCC     TACAGCGCCGCCATCT TTC AGAC-GCGGCGCTGCA     TCACTTTGAATTGCT  64 123
   pRL110519 NONE
   pRL110521  564906 ..  564925 +  -7.1  -4.30014   CCGCGAGCCTGAAAA            GCCCGGT GTTGAG ATCGGGC             TTTTAACTTCCTCGC  71 94
   pRL110527  571713 ..  571743 +    -9  -3.02511   AAGGATTATGCGGTA      GCGTCGCGCAGCT CCTCGA AGC-GTGCGGCGC       TCTTCGACAGGTGGC  61 42
   pRL110537 NONE
   pRL110538  581414 ..  581427 +  -3.7  -3.29043   TCATTGTCATTGATT               GCAGG AGCC CCGGC                TTCTACCCCGACGTT  48 198
   pRL110539  582618 ..  582639 + -17.3  -4.18161   GCCTCCATGTAAAAA           GCCGCCGTG TTTC CACGGCGGC            TTTTCGGCCTTTCTG 100 131
   pRL110541  587304 ..  587326 +  -7.7  -2.79952   AATCGAGATCATCAT          CCGT-CGTGC TTCC GCACGTGCGG           TCGTTCAATTGCTAT  54 257
        cspA  587628 ..  587648 + -13.3  -4.84363   GTATGATACTATCAA            GGTCAGGCA AGT TGCCTGGCC            TTTTTGCTGCTTTCG 100 89
   pRL110543  588550 ..  588578 +   -16  -3.24232   AAGTCCTGATCGTCA        GCGCCGCCTGTC GTCAG GACAGGCAGCGC        TCTCTTTCAAGCGGC  87 32
        soxB NONE
        soxD NONE
        soxA NONE
        soxG  609091 ..  609137 +  -7.7  -3.02144   CGTTTTAAGCTGTAT GCAGCGCGGCGGCG-CCGACCC ATTC GGGGCGCTCGGCGCCTTGCAGC TCTTCCAGCGCATCG  56 108
   pRL110565  611069 ..  611090 +  -3.7  -2.85668   CCGGGTCAATAAGCG           GGTCGGGATC ATG GATA-CGACC           TATGATCTGACCCTG  43 29
   pRL110566 NONE
   pRL110567 NONE
   pRL110568  614111 ..  614154 +  -2.3  -2.52516   CCGGGCCGCGGGCTG CTGAT-GCGGCTGCACCGCG ACAGG CGCGGTCTGGCCTCGATCGA ATTCGTGCTCGCCGC  38 57
   pRL110569 NONE
   pRL110570 NONE
   pRL110571 NONE
   pRL110572  618505 ..  618534 + -11.5  -5.26119   AAACTGGACATGTTC       GTCTAGAGCGGTT CCAG AACCGCTCTAAGC        TTTTGTTTTTACGCA 100 20
   pRL110573 NONE
   pRL110574 NONE
   pRL110575  621518 ..  621551 +  -7.6   -3.6682   GGTTCACTGATCATG    CTCTCGA-CAGTCACC TCGG GGTG-CTGCTTGAGAG     TTTCCATAGCTGAAG  62 270
   pRL110578  625123 ..  625133 +  -2.4  -3.40597   ACAACGCATTGGACT                 GGCG AGG CGCA                 TGTTTGCGTCAAAAG  46 347
   pRL110595  643909 ..  643936 + -14.4  -3.30159   CGGCCCACTGCATAA        TTCCTTAAATCG GGAT CGATTTAAGGAA         TTATGCAGCAATTCA  83 60
   pRL110600 NONE
   pRL110601  652686 ..  652702 +  -5.8  -5.27923   GACCGGTCTCCTGGG              CGTGCC ATTCC GGCATG              TTTTTTGTACCATTC  89 57
   pRL110602  653391 ..  653401 +  -6.8  -3.89614   GCGATCTTGGCTTTG                 CTGC CGA GCAG                 TTTCTCGAGATTGAC  65 155
   pRL110607  659447 ..  659459 +  -2.6   -2.5547   CGGCTTAAGCGAAAG                GGCC TTCAC GGTC                ATTGCTCTACGGGGT  38 33
   pRL110608  659874 ..  659898 +  -9.9   -5.8187   GACTGAACAGACAAG          GGGACCGGCGG GCT TTGCCAGTCCC          TTTTTTTGTTCCCTA 100 51
   pRL110623  675948 ..  675963 +  -7.6  -3.18199   AGAACATCTAAGCAA              TGATGG AATT CCATCA               TTCCGTTCGAAATTC  57 30
   pRL110624  677146 ..  677170 +  -7.7  -3.03159   GATCGCAACAGGGCA          GTCGGAGCCGC AAA GCGGCGTCAAC          TCTTCGACCACTTGC  54 253
        cobK  679905 ..  679936 + -12.2  -2.57211   AGCTTGAAGGCTTCG      CCGAGCTGCCAGGGC CGC GCCC-GGCTGATCGG      ATTATAGAGGGCGAT  65 227
        cobF  683203 ..  683220 -  -4.1  -2.62616   TCATTTCTTACATGA             TCGC-GGC CGG GCCGGCAA             AGCTGATGGAAAGGC  42 50
        cobG NONE
        cobH NONE
        cobI  680419 ..  680439 -  -3.8  -4.30576   TGCCGATCACGAAAA            GCCTGCCG CTCAT CGGCTGCC            CTCCCAGCCCGGCAC  63 14
        cobJ  679532 ..  679548 - -10.1  -3.61715   CATCGTCGCCAAGAA              CAGCGGC GGT GCCGCTA              CATATGCGAAGATCG  72 144
        cobL NONE
        cobM  676867 ..  676896 - -12.1  -3.35046   GCATGCGCTGAAAGA       TCC-GGCCGGCGCG CTG CGCGCCAGCATGGA       GTATCTGACAGCGCG  77 68
   pRL110622 NONE
   pRL110621  673343 ..  673353 -  -4.6  -2.76442   AGGATGACGTAATGA                 GCCA TGC CGGC                 CTCCCTCAGAGCGAG  44 31
   pRL110620 NONE
   pRL110619  671269 ..  671289 -  -3.1  -2.81072   TCGAGGCAATAGAAC            GCGTTTGCC CTC AGCTATCGC            CCGTCTCGCTTTTCA  41 15
   pRL110618  670226 ..  670236 -  -5.4  -3.81287   CATATCATGAGCAAA                 GAGA TAT TCTC                 ACCGTGAGCATATGT  59 40
        nadA NONE
        nadB NONE
        nadC  666570 ..  666583 -  -4.5  -3.61398   TCGCTCGGGCAAGAA               CCGTCG AGG CG-CGG               CCAGCCTAGAATTGC  54 213
  pRL110614A  666198 ..  666208 -  -3.2  -3.33737   GAGCAATGTCCAGAA                 CCGA GGC TCAG                 ACCGCTTCTACTCGC  46 22
   pRL110614 NONE
   pRL110613  664135 ..  664177 -  -5.5  -3.14344   TAGCTGCTTTAGGAA CGCGAC-CGGCGTACGGC TCTGCATG GCCTCACGCCGCGTGACG GGTGAGGAGGAGATC  50 11
   pRL110612  663326 ..  663343 -  -7.7  -2.52516   CGGTTGAGGAGCAAT             GTCCGGGC AAG GCCCG-AC             TGCTTCTACTCCGGA  53 46
   pRL110611 NONE
   pRL110610 NONE
   pRL110609  659874 ..  659898 - -10.7  -2.81207   GACTGAACAGACAAG          GGGACCGGC GGGCTTT GCCAGTCCC          TTTTTTTGTTCCCTA  66 50
   pRL110606  655776 ..  655788 -  -3.3  -3.27406   GCGGCAGCAGAAAAG                CGCAG CGA CTGTG                TCTGAGCTGCGGTGG  46 166
   pRL110605 NONE
   pRL110604 NONE
   pRL110603  652866 ..  652905 -  -2.8   -4.0648   AATGAGATGAAAGAA  GAACCG-CATTCCGTCG ATGTTCA CGTCGGAAAGACGATCC  GCATCCAGCGTCTGT  58 450
   pRL110599  649744 ..  649758 -    -7  -3.01712   GGCCGGCCGGCAAGA               CTGCCG CGC CGGCCG               CATCAGCTGAAATCA  53 38
   pRL110598  648251 ..  648261 -  -3.2  -4.56597   TCGGCGCTCTAAAAA                 GCAA GCT TCGC                 CGCCTCCAAGTGAAT  67 149
   pRL110597  645346 ..  645359 -  -5.2  -3.54424   TCTGAGCGGGCGAAA               GCCG GTTGTG CGGC                CACTTTTCTAACGTT  56 227
   pRL110596  643909 ..  643936 - -14.4  -3.32844   CGGCCCACTGCATAA        TTCCTTAAATCG GGAT CGATTTAAGGAA         TTATGCAGCAATTCA  83 70
   pRL110594 NONE
   pRL110593  641273 ..  641306 -   -14   -4.3739   CACTGCGCGACAAAA     GCACGTCGCATTAA ACTTGA TTCATGCGACGTGC      TTTCGCTCTTTGTTT 100 13
   pRL110592  640787 ..  640803 -  -8.7  -3.46068   CCGCCAAGGCAAAGA              CGTGAGC AAG ACTCACG              CTCTGGAATAACCGT  66 76
   pRL110591 NONE
   pRL110590 NONE
   pRL110589 NONE
   pRL110588  633340 ..  633354 -  -2.8   -4.2828   TTTCATTCATGAAAA               CCGAAT TCT ATTCGC               CTGCCAGTAATGGAT  61 18
   pRL110587  630856 ..  630871 -    -6  -4.10331   CGAATGAAGCAGAAA              GGGCGC ACGC GCTCCC               CTGTTCGCTCCCATT  66 52
   pRL110586  630414 ..  630430 -  -2.1  -3.35046   GTAGCCCCCGAAATA              CGTGCTA TCT TTGCGCG              CTTGAGGGAAGGTCC  44 13
   pRL110585  629951 ..  629964 -  -9.5  -2.71712   TCCCGCGCTCCAAAT               GCCGC GATA GCGGC                TTCGTTCAATCCTGA  62 31
   pRL110584  629001 ..  629012 -  -2.2  -3.12351   CGCCGCCATAGCGAA                GCTA TGCT CAGC                 CTGGCGGCACCACCT  42 21
   pRL110583  627757 ..  627767 -  -2.4  -3.64716   GCATTGGCCAAAACA                 CTCG CCT CGCG                 GCTCCCGGCATGCCG  48 77
   pRL110582  627447 ..  627461 -  -2.1  -3.16683   ACGGTACCCTATGAA               TCAGT GATCA ACCGA               TTTGGGAATCTGGAG  42 131
   pRL110581 NONE
   pRL110580  626365 ..  626397 - -13.3  -2.74144   CCCGGATCGTGAAAC      GGTGCTGTATCGCGG GGG CCGCGATGCGGCTCC      CACTTTGACCGGGGC  76 282
   pRL110579  624862 ..  624883 -   -13  -3.09327   CCATGGTATCGAACA           GGGAGCCG GCCCCT CGGCTCCC            GTGCTGAATGTGAAG  75 358
   pRL110577  623415 ..  623425 -  -6.8  -3.53811   CTCACGCGTCCCAAA                 GGGA CGC TCCC                 CAGCATGCGCAGAAC  58 206
   pRL110576  621144 ..  621168 -  -8.5  -4.07568   CCTCGCCTCGGAAAA          CCGCGGCAACA ATA CGTTGGCGCAG          ACCCTCTACCAGCAG  73 203
   pRL110564  608735 ..  608757 -    -4  -3.53091   AGGGCTTGCGGGAAA           GGCCTTCGTC ATG GACCAGAGCC           ACGGGCGCGTGCGTA  51 348
   pRL110559  602905 ..  602922 -  -4.9   -4.2349   TCGTCATAGTGAAAA             TTCCTCA ACCG TGAAGAA              AACCTATTCCCGCCG  65 29
   pRL110558 NONE
        glxB NONE
        glxC NONE
        gltB NONE
        glnT  597652 ..  597679 -  -5.4  -2.92157   TATCAAGTGCAGAGA        GCGCGATCACGC CGGA GCTTGTTCGCCC         CGGCGCGTCAGTTAT  48 58
        purU NONE
   pRL110552 NONE
   pRL110551  594814 ..  594824 -  -3.2  -3.55444   GTGCCACCGCTCAAA                 GGAA CAA CTCC                 TCCGGATCAGGCGCG  50 10
   pRL110550 NONE
   pRL110549 NONE
   pRL110548  591335 ..  591370 - -16.2  -3.21276   GCGCGGCTCACAATA    TGCCGGAGGATAGTGC CCGA ACACCCTCCTCCGGCA     ATGCAGGCCCGCCTC  85 42
   pRL110547  590589 ..  590601 -  -3.3  -4.15453   CAAGTTATTGGAAAA                GCGTT GCT ATCGC                TGGAAGCGCTGCACG  58 96
        minC  589703 ..  589730 -  -4.8  -3.64236   ATTCAAAGTGTTAAA        GCGTC-CTTTGCG GCT CTCGAAGAGACGC        CCGGCGCTGCCGTCA  54 38
        minD NONE
        minE  588537 ..  588590 -  -8.8  -3.25088   TCGCAAAGCCAGGAA GTCCTGATCGTCAGCGCCGCCTGTC GTCAG GACAGGCAGCGCTCTCTTTCAAG-C GGCCTGCACGGCTGC  65 20
   pRL110540  582618 ..  582639 - -17.3  -4.65895   GCCTCCATGTAAAAA           GCCGCCGTG TTTC CACGGCGGC            TTTTCGGCCTTTCTG 100 55
   pRL110536  578358 ..  578371 -  -2.4  -3.73042   GCGTCGAGTAAAAGA               TTGC CGCCTC GCAA                CGGAGTGACGCGCAG  51 166
   pRL110535 NONE
   pRL110534  576166 ..  576189 -  -5.1  -3.41602   TCCATCGCATGACAA          CGCCGCACG TCTTTT CGAGAGGCG           CAAAGGACGCTGTAG  54 50
   pRL110533 NONE
   pRL110532  574748 ..  574773 - -10.4  -4.29391   AAGCACAAAAGCAAA         GCGCCCGCTC GGGAGG AAGCAGGCGC          TGGCATATTCTTTGA  86 63
   pRL110531 NONE
   pRL110530 NONE
   pRL110529  572538 ..  572548 -  -2.4  -3.74077   GGGCAGATACCTAAA                 GCGC GTC GCGA                 TCGTTCAGATTCGCT  51 64
   pRL110528  571379 ..  571408 - -14.3  -2.62263   ATTTCGGTCACATCA       GCGCTGCCGCATGC ATC GC-TGCGCCAGCGC       AATACCTATTTCAGT  74 320
   pRL110526  567062 ..  567084 - -11.3  -5.75342   TTTCGCGAAAAAAAA          GGGCCGACGG AGAA CCGT-GGCCC           ATTAATTGTGAAGGT 100 338
   pRL110525  566742 ..  566765 -  -6.6  -3.90744   TGTTCCGTGAAATAA          CCGGGGCC ACTTACCA GGCCCAGG           AGATCGGGACTCTAC  66 12
   pRL110524 NONE
   pRL110523 NONE
   pRL110522  564906 ..  564925 -  -4.9  -4.11216   CCGCGAGCCTGAAAA            GCCCGGT GTTGAG ATCGGGC             TTTTAACTTCCTCGC  61 47
   pRL110520  562670 ..  562692 -    -7  -3.54424   TGCCAGGCGGCCAAA           GTCAACGTGA AAA CCAGGTTGAC           GAAACCGCTTTAAGA  60 183
   pRL110517  557888 ..  557899 -  -2.2  -3.34398   CGCCGGCTCGAAACA                CGCA TGTC TGCA                 CCTCCCGCGAGGTTT  44 39
   pRL110516 NONE
   pRL110515 NONE
   pRL110514 NONE
   pRL110513 NONE
   pRL110512 NONE
   pRL110511  551637 ..  551690 - -10.4  -2.64155   GCCCTTTGAAAGCGA TGTCAGTATC-CCC-CGCCATCACCG CCTC CGGCGATGGCGAGGGTGATCCTCAAA TCAAAACCCGCGACC  64 52
   pRL110509 NONE
   pRL110508  549171 ..  549184 -  -3.8  -3.53091   AGCCGCTCGGCTAAA               CCGA GGCTCT TCGG                CCTTCCAGACCTCAC  50 37
   pRL110506  546840 ..  546887 -  -4.9   -3.5936   GCCAAAGGCGGCAAA GGTCTCGACGC-CTGGCTGGATCA GGC TG-TCCAGCCGCTGCGGC-AGACC GTCGATTTTCTGGAG  55 277
   pRL110500 NONE
   pRL110499 NONE
   pRL110498  539324 ..  539340 -  -9.3  -2.78384   TTTCTTCCTACCAGA              CGAGGCC GCG GGCCGCG              ACATCCTCGACGCGG  60 1
   pRL110497  539046 ..  539056 -  -2.4  -3.55563   ACTCTACTCGGCAAA                 CCCG CCA CGGC                 TTCAATTTCCTCGAA  48 44
   pRL110496 NONE
   pRL110495 NONE
   pRL110494 NONE
   pRL110493 NONE
   pRL110492 NONE
   pRL110491 NONE
   pRL110490  526100 ..  526111 -  -7.2  -3.21416   GAGGTGGATTATCAA                GGCC AGAC GGCC                 GTTCTGCCCGTGACG  56 454
   pRL110484  519677 ..  519701 - -19.3  -4.18018   CCGCGGGACGGAAAA          GCGGCGGGGAA TGG CTCCCCGCCGC          GGCTCGTTCAAGTCC 100 48
   pRL110482 NONE
   pRL110481  516320 ..  516331 -    -3  -4.62336   AGTTCAGGCTAAAAA                TTTG ATTT CAAA                 TGTCTTTTTGCGAAA  67 21
   pRL110480 NONE
   pRL110479 NONE
   pRL110478 NONE
   pRL110477 NONE
   pRL110476 NONE
   pRL110475  508631 ..  508644 -  -3.8  -3.01712   CGGCGGTTCGCAATA               GCCA AACGGA TGGC                TTTCGACGCCATGGT  44 130
   pRL110472  506831 ..  506853 -    -2  -2.71011   ATTTCTCCCGAATGA          CGATCACCG CAATTT CGA-GATCG           ACGGAGGATGGCTAC  38 37
   pRL110471  504985 ..  505015 -  -3.9  -2.78712   CTTGCAAGGCAATGA      CGACACCAGGC-CA TTAC TGCGCCGCGCGTCG       TGATCAAGAATCACG  43 62
   pRL110470 NONE
   pRL110469  503733 ..  503764 -  -7.3  -2.71364   CCACGCCGCTAATCA     CGCAGCCGCCGTGCT GGTC AGCACGCCG-C-GCG      AGACCGTTGAGTAAC  53 93
   pRL110465  500466 ..  500490 - -12.8  -3.57629   GAAGAAGTGAGACAA          CTGAGGCCGC GTTAG GCGGCCTCTG          TCATTTCCACATCAC  81 12
   pRL110460  496406 ..  496450 -  -2.8  -4.29106   CCCTATACGAAGAAA CTCATTGCGGCAGTGCCGG TGCCCGAT CCGG-ACCGTCGCCACGAA AAGCGGATGGTGGCG  64 174
   pRL110453  488436 ..  488477 -  -5.8  -4.82667   TGACCACATCAAAAA CCCCACGACG-CAGATCCC ATCGA GCGATGAGGCGTCATGGGG CGAAACTGCCCGGGG  78 189
   pRL110452 NONE
   pRL110451 NONE
   pRL110450 NONE
   pRL110449 NONE
   pRL110448 NONE
   pRL110447 NONE
   pRL110446 NONE
   pRL110445 NONE
   pRL110444 NONE
        thiM NONE
        thiE NONE
        thiD  474911 ..  474931 - -15.4  -4.27316   GTGCCGAACGCAAAA            CGGCCCGG GAAGA CCGGGCCG            TTTTCGATTGGCGGT 100 60
   pRL110440 NONE
   pRL110439  473213 ..  473236 -  -4.4  -2.69151   TGCGGTGAGAGATGA          GGTGCCGGTC AGGA GACCAGCGCG           CTTGCAAACATGTCT  43 10
   pRL110438 NONE
   pRL110437 NONE
   pRL110436 NONE
   pRL110435 NONE
   pRL110434  467904 ..  467925 - -10.1  -2.64243   GCATAGGGCAGACGA           CGAGGCCAG CAAG CCGGCCTCA            GATCATCCGCATGAA  62 23
   pRL110433  467106 ..  467134 - -10.2  -2.87132   GCCGGGGCCGAGACA       GCGCAGC-TGCGC TCCG GCGCCCGCCGCGC        CATCAATGCCGCCCG  61 63
        betC  463352 ..  463399 -  -8.1  -2.64051   TCACTATATAATGTA GAAGAGGATTCAGATTTTAGGCCG ACC CGGCCTAAAATC--A-TCCTGTTC TAGCGCGGGAACCTT  56 25
   pRL110426 NONE
   pRL110425  459724 ..  459736 -  -4.7  -3.63627   CGCCTATATGCCAAA                CGCGC CGA GCTCG                AAGCCAAGCTGGAGC  55 196
   pRL110422  458558 ..  458600 - -19.9  -3.61398   GCGGCCTTCCAATAA GCGACAAGGGCCGCCGTCT GGTCG AGACGGCAGCCCTTGACGG GGGCAGGGAGAGATC 100 64
   pRL110420  456166 ..  456189 -  -5.2  -3.40522   ACCTGGCGACGACAA          TGTCGAAGCT GCTC AGCGTCGGCA           TGCCTTTCGACAAGG  53 332
   pRL110417  453153 ..  453183 -   -14  -2.60075   TCGTCTTCAACGAAC       TGGTTGACGCCGAG CAG CGCGGCGTCAACGA       TTTCAACCCGGCCCA  71 457
        rhaR NONE
        rhaS  447794 ..  447817 - -17.4  -2.70298   GTGTCGAATGAGAAT          CCCGGCGACC ATCA GGCCGCCGGG           CTTTTATGCGTCGGC  86 47
        rhaT NONE
        rhaP NONE
        rhaQ NONE
        rhaU NONE
        rhaK NONE
   pRL110407  441485 ..  441500 -  -6.8  -4.03696   AACAATGACTACAAA              CCG-GGC TTT GCCGCGG              CACTGATGCTCAAGG  67 209
   pRL110388  420415 ..  420430 -  -2.5  -4.07687   AGGTCGCGTCGAAAA              GACGG GCCGGG CCATC               TTTTCAAAAGCGTCG  56 427
   pRL110386  419145 ..  419155 -  -8.2  -3.08581   ACTAATTCGCAAAAG                 CGGC AAT GCCG                 GTAATCGCCCGGCCG  60 1
   pRL110385 NONE
   pRL110384 NONE
   pRL110383  416424 ..  416460 - -10.2  -2.75819   CAGAGACCTTCAAAT    TCGACGATTCGATCAA GGCGT TTGATCGCGCCGTCGA    GGCCCGGCCGAGCGA  60 84
        kdpA  412964 ..  412999 -  -7.6  -3.06315   GTAAGATTTTGAAGA    TGGCGGCGATGACGAGG AGG CCT-GCCATCATCACCA    GGATGATGTCGGAGG  57 132
        kdpB  410794 ..  410823 -  -8.6  -3.01712   GTTCTTTTGCGAAGA       GCTCCGGTTCCGA TCCTC TCGGAACCGG-GA       TGGCTCCAGGCCTCA  58 38
        kdpC  410168 ..  410179 -  -3.6  -3.35813   GCGGATGGGAAGGAA                CGGG TGCG CCCA                 GCCTGGCAGGGTCAC  48 37
        kdpD NONE
        kdpE NONE
   pRL110376  406151 ..  406174 -  -8.8  -2.63596   TCTGATTGCAGACGA          GCG-GGCGCGA CCT TCGGGCCGCGC          CTTATTTATGATGCC  59 66
   pRL110374 NONE
   pRL110373 NONE
   pRL110372 NONE
   pRL110371  400785 ..  400795 -  -4.6  -4.95155   CTTAGATCACAAAAA                 GCCC AAG GGAC                 TCTCGCCAAATGCGA  78 177
   pRL110370  399839 ..  399856 - -11.3  -2.91465   AACTCAAACCGAAAG             GGCGGTT GATT AACCGCC              GTTCGCCGGAAGGCT  70 17
   pRL110360  390387 ..  390411 -  -2.7  -3.76839   CAAGGGGAACCGAAA          TGCAGAAGCCG TCT CGGATTGTGCT          CGTGGTGGAAGACGA  52 359
   pRL110358  389157 ..  389167 -  -8.2  -2.79183   GTCAGGCCGAGTACA                 GCGC ACA GCGC                 CGATCCGCATTCGCG  54 513
   pRL110355  386901 ..  386922 -  -2.9  -2.84841   TGGGAAGAAAACTGA           TCCGCGGCA ATAC TATCACGGA            TATCTCAAGCACCGT  41 74
  pRL110354B  385920 ..  385943 -  -8.1  -3.33696   CGCGTTTTCAAGCAA          GTGCGGTTC CGTGGC GAACCGCCC           ACCCGGAGCTGTTAG  60 461
   pRL110352  383019 ..  383044 -  -8.3  -3.28924   CATTCTCCTTGAGAA         GCGCAACCCAGT TCT ACCGGGCT-CGC         TAGACTGCCATCAGG  62 36
  pRL110351A NONE
   pRL110351 NONE
   pRL110350 NONE
   pRL110349 NONE
   pRL110348  380110 ..  380122 -  -3.3  -2.62933   CAATCCCCGAGAGCA                CCGGC ATC ACCAG                TGGGCATCCTATGGG  40 440
   pRL110347 NONE
   pRL110346 NONE
   pRL110345 NONE
   pRL110344  376257 ..  376274 -  -9.1  -2.78384   GGGCTCGGTATGACA             TCGCGGC CCTC ACCGCGA              TGTCATGGGCTCCGC  60 47
   pRL110342  374097 ..  374127 -  -4.5  -3.53012   GGCGCCCCTTCGAAA       GGCCGACTGGGTG GTCTA CGCCAAGCCGCCC       TTCGCCGGGCCCGAA  52 412
   pRL110337  368878 ..  368890 -  -6.2  -3.12351   GTTGTCTACAGTGAA                GGGC CGGAC GCCC                GCAACGAGCGGCGGG  52 114
   pRL110336 NONE
   pRL110335  367103 ..  367116 -  -5.9  -2.57931   GTCAGGCGGCAGAAG               GCGCG ACGG CACGC                GGTTTTTATCCACGC  48 304
   pRL110331 NONE
        hmrR  362443 ..  362466 -  -8.8  -3.02461   GAACTTCCTCGAAGA          GCGCGAGCGGT TCG ACCGC-CTCGC          CAACGACCTACGCGA  61 280
   pRL110325 NONE
   pRL110324  359526 ..  359544 -  -4.4  -3.40403   TGGCCTGGAGCACAA             GCCGTGGG AGG CCTATGGC             TTCTATGGAGTGATC  51 366
   pRL110319  354291 ..  354310 -  -2.2  -2.93853   GCTTTGCAATCAAAT            TATTCC TTGGCGTC GGAATA             GTTCTTATATTGCAG  41 5
   pRL110318  353704 ..  353721 -  -9.8  -5.30616   CGAGGCAAAGAAAAA             CCCGCC GGTGAG GGCGGG              TTCAGCGGTGCTCGC 100 306
   pRL110317  352933 ..  352958 - -10.5  -3.73224   GCACGGGTGATTAAA         CGGCGAGAT ACATGGAA ATCTCGCCG          CTTGCCCGGACTGCG  77 62
   pRL110316  350919 ..  350953 - -13.6  -2.78463   AGTGCCTGGAGGAGA    TCCGCGGCC-GGTCC TGCGTT GGATCAGGCCGCGGA     TCGGGGGCTGAAGGC  76 140
   pRL110315  350047 ..  350063 -  -6.5  -3.07622   AGAGACGTGATCGAA              GCGGC TCGATCG GCCGC              CAAGTGCCTCTCACT  54 36
   pRL110312  346832 ..  346851 -  -4.9  -4.10161   TATTAGGGTTGAAAA            TCGGCAC TCATGC GGGCCGA             AACGCCGCCGCCTTG  61 13
   pRL110311  346143 ..  346159 - -15.1  -3.70149   CTCACACGATCGAAA              CGCGGCC GCT GGCCGCG              AAGAGCAGGATGGAA  90 308
   pRL110310  342648 ..  342667 -  -2.8  -4.76312   GAGAACATGGAAAAA            CACATCGTC AAA GCCGATG-G            AAACGGCGCGATCGA  70 411
   pRL110309  342126 ..  342170 -  -3.3  -3.55444   TGGCCATGGGTCAAA CTCCCTATACGGCTGGCGGAA AGC CTCCGCTTGCCGCATCAGTTG TTAATGGTGGCTGTG  50 26
   pRL110308  341808 ..  341824 -  -2.9  -4.44667   CGTCCCAATAATAAA              GCTCGTA TGC CATGAGC              GCTCAATCCTTCGGT  64 28
   pRL110307  341050 ..  341083 - -16.9  -3.05384   TTTGCTTTTACGCAA     TTCCCGGCAAAACCGC TTC GCG-CTTTGCCGGGAA     TTGCTCTTAACTCAG  88 37
        hyfB  325352 ..  325371 -  -2.8  -3.27475   GCCTGGACGAGAAGA            GCTGTGAT CAGG ACCATAGC             GCCAGCACCAGAAGC  46 13
        hycD  324417 ..  324429 -  -3.3  -3.72576   GGCCCGTCCATCAAA                GGCTC CTC GAGAC                GAACCGCAGGAGGGT  53 8
        hyfE  323734 ..  323759 -  -2.5  -2.79183   TCGAGGGCCAGGACA         GGGGAGAAAAC GTTC ATTTTCGCCTC          CTTCCCTTGAAATCA  39 13
        hyfF NONE
        hycE NONE
        hycG  320193 ..  320204 -  -4.4  -2.57931   CCCAGCCTGCAGAAG                TCGA ACCA TCGA                 AACTGCCCGTCACGA  43 35
   pRL110291  319084 ..  319124 -  -8.2   -3.5764   AAGCTGATTCCCAAA GCGGCAGGTTCA-CGTCGT GTAG ACAGCGTTGTGCCTGCCGC  CTCTTTGACCCCAAA  66 62
   pRL110286  314623 ..  314651 -  -8.8  -3.61398   GGCGCTGCGCAATAA       CGACC-GGCCGCC GATG GGCGACCTGACCG        CCGCGCTCGACCTGT  68 150
   pRL110284  311556 ..  311577 -  -3.7  -3.85092   ATGACGCATATGAAA           CATTGCATA TTCT CAAGCAATG            ACCGAGATGCGTTTC  55 89
   pRL110283  310165 ..  310178 -  -2.4  -2.54634   CTTGATATCAGGAAT               GTTG TTCTGT CAAC                CAAGTTGCGGCTTTA  38 160
        abfA  308508 ..  308555 - -11.7  -2.53213   TAACTCTTTAATTTA GAACAGGATTCAGACTTTAGGCCG ACC CGGCCTAAAATC--A-TCCTGTTC TAGCCGGGGCGCCCC  67 64
   pRL110281  306308 ..  306334 - -17.4  -2.94679   ATCAAGTGGAAAGGA         TCGACGGACATG CCA CATGCCCGTCGA         TTAGGGGGCCGGCGC  89 68
   pRL110280 NONE
   pRL110279 NONE
   pRL110278 NONE
   pRL110277  302405 ..  302426 -  -5.7  -3.34895   TTCAGCTCCAATCAA           GGCGCCCGG TTTC CCAGCCACC            TCTTCAAATTTCCGC  54 197
   pRL110275 NONE
   pRL110274  296432 ..  296455 -    -6  -4.56597   GTCGTCCCGGAAAAA          GTGCTCGAGCG GAT CGAT-GAGCAC          GTGAAGGTGATGACG  76 291
   pRL110271  293740 ..  293756 -  -3.5  -3.01712   GCTTCCTTGCCAATA              CCGGCGC ACT GATCCGG              CACGGAGGATCGGCT  43 465
   pRL110268  291185 ..  291232 -  -2.1  -2.78384   CGCGCGTTGACGACA CGTCGTCAGCCC-CA-CGG ATGCGAGTGTGG CCGGTTTGAGCTGACGACG TCGGCACGCGTCGAG  39 123
   pRL110267  290482 ..  290506 -  -2.1  -3.36492   GGGTCAACGCGAGAA         CAGGCTCGCC ATCCGA GG-AAGCCCG          TGAAGGGTCAATCCA  44 76
   pRL110266  289086 ..  289118 - -10.5   -4.3586   CCACGGAGATCAAAA      GGCTTGTCACGGCCA ATG CGGCGGCGAAAAGCC      CGCACGAGTGGCCGC  85 511
   pRL110259  281070 ..  281087 -  -6.2  -3.54543   ATGGACGTCTCCAAA             CCCGCG TCGCTG CGCGAG              GTCGTCGGAAACGCC  58 56
   pRL110256 NONE
   pRL110255 NONE
   pRL110254  273469 ..  273479 -  -2.6  -3.36492   GGGCGAAGTGGACAA                 TATA CTA TATA                 TTAGAAAACGATCAA  44 37
   pRL110253 NONE
   pRL110252 NONE
   pRL110251  270911 ..  270936 - -13.3  -2.71731   GTGAGGCGTCAAGGA         GCCCCGCGGTCG CAA CAACCGCGG-GC         TCTTTGCGTGAGAAG  75 369
   pRL110248  266006 ..  266032 - -21.6  -3.62597   GGTAGGCGTCAAGAA         GCCCCGCGGTCG CAA CAACCGCGGGGC         TTTTGCGTTTGTGGG 100 164
   pRL110241  255701 ..  255724 -    -3   -3.6053   GGCCGGAGAAATGAA          GCTTCGAAAG GTCG CGCTCGACGC           CGGGTTCACGCATTT  51 122
   pRL110239 NONE
   pRL110237  253547 ..  253560 -  -4.5  -4.19953   GAGGCAACCGCAAAA               CAGCG CCGG CACTG                CTGCGATCCGTCCCG  65 360
   pRL110236  250615 ..  250626 -  -7.2  -3.28712   CTTGCGGCGCCACAA                GCGC TTGA GCGC                 TTACAGCGCCGCGCG  59 125
   pRL110235 NONE
   pRL110234 NONE
   pRL110233 NONE
   pRL110232  245105 ..  245115 -  -8.2  -3.28712   TGGTTGTTTCTACAA                 GCGC GTT GCGC                 GATAGACGTCCTGTC  62 295
   pRL110231 NONE
   pRL110230  243236 ..  243260 -  -3.5  -3.48593   CAGTGTGCCACAGAA         TGGTGACGGG CCAAAC CCCG-CACCG          AACTGTGAGAACGGA  50 189
   pRL110229  242445 ..  242470 -    -4  -3.85817   ATCTTCGTGCACAAA         CCGCTCT-CGG TGGTT CCGGAGAACAG         CCTGAAATTTGTCGT  58 515
   pRL110221  235377 ..  235406 - -11.3  -2.71244   GGAGAAACAGAATAT       GGGCGGCGACCCC TCGC AGAGCCGCCGCTC        TTCGATCAGTTCCCG  67 31
   pRL110220  234304 ..  234317 -  -3.8  -3.55444   CCGCCATGGTTCAAA               CCTC TGGCGT GAGG                CGCAATCCTAATCCT  52 33
   pRL110219 NONE
   pRL110218  230961 ..  230989 - -10.1  -3.12351   CTGTTGGATACCGAA        CTGTGAGCCGCTG TCA CGGCGGCTCTCTG        CTTCCTGGGAGACGT  66 134
   pRL110217  229876 ..  229902 -  -5.3  -3.14463   AATCGGCTCCAGCAA         TAGCAAAAG AAGGTTGAG CTTTTGCTA         CTACGGCGCTGCGCG  50 186
   pRL110216  228972 ..  229007 - -13.3  -3.54297   ACTCAGCAACGAGAA   CCGCCG-CC-TTGCCGC ACCA GCGGCCATGGACGGCGG    TCTGACCTCCGGCCT  77 315
        hutC  223399 ..  223427 -  -4.7  -3.05384   CGTTCCTGTAGTCAA        GTTATAAGTCTCT GCC AAAACCTTATAAC        GGGCCGCCTGATGCT  47 146
   pRL110209  221941 ..  221957 -  -3.5  -3.54424   CTGGATCTGTCGAAA              TCCCGCC CAT GGCTGGC              TGACGGAACTGCTGG  52 227
        hutI NONE
       hutH1 NONE
   pRL110204 NONE
   pRL110203 NONE
   pRL110202 NONE
   pRL110201  212572 ..  212592 - -10.3  -2.71745   CCTTCAAGAAGGAAC            GCGGCTGGC ACC ACCTGCCGC            TTTATTCCGACACGA  60 303
   pRL110196  209381 ..  209413 -  -4.8  -3.28791   ACGCTTCTTCCACAA      CAGGTGCGAGCA TCACAAATC TCCTCGCTCCTG      CAGAATGGCAAGGTA  49 5
   pRL110195  208707 ..  208717 -  -5.4  -3.60296   GATTTGTATGGGAAA                 TGCT CGA AGCA                 CCACCAGCGGGTCGC  56 154
   pRL110193  206419 ..  206456 -  -5.5  -2.87132   GTTGCGGCCCAGATA   GCTGCGGCCG-TAGTTGA AGA TCAACTGGCTGCCGCTAC   GCTCAAGACGACCGG  47 103
   pRL110192  205240 ..  205259 -  -4.2  -3.20878   CAATATCCAATTGAA            GGAGCCGCG ATC CG-GGCTGC            TCGATCACTCAACTA  47 30
   pRL110188  203297 ..  203312 -  -7.6  -3.17257   AAAAGACAGCCAACA              TGCAAC CAGC GTTGCA               ATTCCAGTGCCAACC  57 86
   pRL110187 NONE
   pRL110186  201490 ..  201504 -  -8.5  -2.73334   AGGAACGACATAGCA               CCCGC ATTAG GCGGG               TTTTCCGCTAGTTGT  57 86
   pRL110185  199855 ..  199865 -  -3.2  -3.39844   CTCATATTGGAAAGA                 GGAT TAT ACCC                 CGTTCTTTCTGAAAA  48 73
   pRL110184  198895 ..  198914 -  -4.3  -3.33696   GGCGGGCCTAAGGAA            CTCGCCCT CTATC AGGG-GAG            CTTAGATGGACGATG  49 45
   pRL110176  190437 ..  190491 -  -7.9  -3.05384   TTGCTGGGCAGCGAA TTGCGTTTCGCCGATGGGAGCCCGC AGCGAAA ACGGG-TCCCATCGGCGATT-GCAC AGCGGTCCGCACCCG  57 77
   pRL110175  188917 ..  188936 -  -4.2  -2.64155   GCGCGTGGAAAGGGA            CCATCACC GCAT GATGAAGG             GATTGGTTGGGCCTT  43 9
   pRL110174 NONE
   pRL110173  187545 ..  187571 -    -2  -2.78996   CATCGCGACCGAAAG         GCCGAGGGCGAG GTT CTCGATCATGGC         TGTCTCGCTCAGAAC  39 34
   pRL110172  185551 ..  185579 -  -9.6  -3.58037   CACCAATTTCGCAAA        CCGCGATGCCAA GAGCT TTGGGATCGCGA        TCGATCGATCGGGCG  68 521
   pRL110169 NONE
   pRL110168 NONE
   pRL110167  179669 ..  179695 -  -6.5  -4.70772   AGATATTGAAGAAAA         GACCGTCCG TCAGTGAAC CGGGCGGTC         TGAACATATGTCAGG  79 41
   pRL110166  178818 ..  178842 - -14.3  -3.19668   GATGATGCAACCGAA          CTGGTCAGGTG CCT CGCCTGACCAG          CGTTCCCGTCGCGCT  81 41
        fabG NONE
   pRL110163  175605 ..  175618 -  -2.3  -3.07013   TATCGGCCGAAGAGA               CGGGT CGCA ACGCG                TTCGGGGGCGTGGGT  42 70
        gyaR  174578 ..  174591 -  -5.3  -3.53012   TCGGTCCTTTGGAAA               TCGAT CGGC ATCGA                TCTCGCCTCTGATTG  54 52
   pRL110161  173056 ..  173081 -    -4  -3.31144   GCGCCATCGCTAGAA         CTCACCTCCA TTGGTT CGAAGATGAG          TCTAAGCCTTTGAGC  48 48
   pRL110160  171765 ..  171795 -  -3.3  -5.32944   GTCATAACGAAAAAA      TCGTTCGGCTACCC AGAA AGCTAACCGA-CGA       GGGAAGTGGGCCTTT  85 339
   pRL110156 NONE
   pRL110155 NONE
   pRL110154 NONE
        ttuC NONE
   pRL110152 NONE
   pRL110151 NONE
   pRL110150 NONE
   pRL110149 NONE
   pRL110148  159937 ..  159961 -  -9.2  -4.93296   GCACGACGATAAAAA          GCGGGCCACT GAGAT AGCGGCCAGC          TTTTGGTTAAATGGC  90 60
   pRL110145  156532 ..  156559 -  -9.8  -2.52464   GCTGCTGCCAAGCTA        CCGGATGAGAGC AGTG ACGCCCATCCGG         TAGCACGATCGCATT  62 50
   pRL110144 NONE
   pRL110143 NONE
   pRL110142 NONE
   pRL110141  153141 ..  153176 -    -6  -2.71325   GCAGTGATAAACGGA    GCCGCGGAGTGCTATA GCCC TACCGCCTTCCGCAGC     GTCTCATTTATCCGG  48 74
   pRL110131  142187 ..  142210 -  -4.5  -3.62191   AGAAGACGAAACCAA          TCTGCCGCC AACCGA GGCACCAGA           AGACCCCGGCATCCC  53 149
   pRL110127 NONE
   pRL110126 NONE
   pRL110125 NONE
   pRL110124 NONE
   pRL110123  137007 ..  137022 - -11.8  -2.64735   ATTTGACTGAGATCA              GGCCGC CAGA GCGGCC               ACGATCTCTTCGGGG  70 7
   pRL110122  136738 ..  136767 -  -2.1  -3.67296   TACGATCGAGCGAAA       CAGCGACATGAGAT TAA ACCTCA-GTGGCAG       GGAAACGCGTTGGCG  48 16
   pRL110121 NONE
   pRL110120  135641 ..  135657 -  -4.3   -4.3739   CAGCCTCCCAGAAAA              CTTCAGC AGG GCCGACG              ATGTCCAGTGACTGC  68 75
   pRL110119  134504 ..  134514 -  -8.2  -3.15663   ATTCATCGCGATGAA                 GCGG CAG CCGC                 CTGCGGGCTTAACCT  60 145
   pRL110118 NONE
   pRL110117 NONE
   pRL110116  133174 ..  133195 -  -3.7  -2.79183   CCGACGGCGATCAGA           TGCTGGCAA GCGC TTGCGAACA            TGGTTTGGAAGGCAT  42 469
   pRL110114  131853 ..  131876 -   -11  -5.53991   TATTCACCAAAAAAA          GCCCCGCCTT AGGT AAGACGAGGC           TAGTTGGGATTGCGG 100 76
   pRL110108 NONE
   pRL110107 NONE
   pRL110106  123729 ..  123739 -  -8.2   -3.1855   GTTGCGAAGATGCAA                 GGCG TAA CGCC                 GGAGGGTGGGGAGCT  60 515
   pRL110104  121804 ..  121822 -  -3.8  -2.71364   TTAGGTCGCCAATGA             TGCCAAAA CGA TTACGGCA             CGACTGGAAAATCAA  42 398
   pRL110103  121140 ..  121168 -  -2.9  -3.01712   CGTTGCGCCGGAAGA        TCGTCATAGGTCG GAT CGACCTTGGTCGT        AGCACGCGCCTCCCT  42 134
   pRL110102  120230 ..  120246 - -10.9  -2.80096   AACAACAGGTAATCA              GCGGAAA TCA TTTCCGC              CTCCTCAACCCTTGA  66 30
   pRL110096  108938 ..  108950 -  -2.7  -2.87881   GAATTGCGGCAGATA                GCAAA TTG TTTAC                CGATCATTGTCGCCA  41 29
   pRL110095  108123 ..  108135 -  -6.2  -3.29096   CTTACCAACTATGAA                CGCC CCGCT GGCG                CATCCGGCACTGGTG  54 70
   pRL110093  105897 ..  105920 -  -5.2  -2.74792   CGACCACTTCGAAAT          CACCGTGTCCG CCA CCGAC-CGGCG          CATCGATGTCAGGAA  44 93
   pRL110089 NONE
        pcaC NONE
        pcaH NONE
        pcaG  101082 ..  101099 -  -5.5  -3.14344   TAGCCGCCCCAGCAA             GCCGATCG CGA CG-CCGGC             CCTTAAATATCGAGA  50 28
   pRL110085 NONE
         gno   98889 ..   98917 -  -5.1  -4.09243   GATATCGGCGCAAAA        CCGCCGGCAGAGA TTT TCAATGCCGCCAG        CTTCCTGCAGGCGCT  63 150
   pRL110082   97115 ..   97130 -  -2.5  -3.57144   CGGGCGATCGCCAAA              CTCGG ATGATG CCGAA               TTTAGAGCAAGATGC  48 124
   pRL110074   89303 ..   89350 -  -8.5  -5.08255   ATGCGCAAAACAAAA GGTTA-GAGCGGCTCTGCGCTT TCATG AAAAGCTGAGCCGCTCCTAAAC CTTAGCTCAAGAGGC  90 32
   pRL110071   86477 ..   86490 -  -5.3  -3.05844   CTTCGGACTGGAAGA               TGAAG GCGG CTTCA                GCGGACCTGCTAGAT  50 35
   pRL110070 NONE
   pRL110069   84874 ..   84922 -  -8.8  -2.56596   CGGCGGACGAAGCGA GGCGGACCTGGTGGCCGAGCT-GG TGG CCGAGCTTCGCCACC-GGTTTGCC GGCAGCGACGAGCCT  53 181
   pRL110066 NONE
   pRL110065   80072 ..   80093 -  -3.6  -3.75437   AACGACCGCATCAAA           TGGCCAGC AAAAAG ACTGGCCG            AACGCTCAAGCGTTC  55 382
   pRL110064 NONE
   pRL110063   78609 ..   78656 -  -3.2  -4.07568   TTGTCGCGCCGAAAA CGGCGATGGCG-AGCCCGATTGC CGA ACAGCTCGGCTGCGCCTTCGACG ACGGCCCGTTCGGGC  58 255
   pRL110061   77073 ..   77088 -  -3.3   -3.8377   AAGCGGGAGACGAAA              TGATC GCGTCA GATCA               ATCGGGCTATGAATT  53 277
   pRL110060   75030 ..   75084 - -13.6  -3.28712   CGTGCTCGCCCATAA CGGCATCGCCGTCAG--CGGGCTGCC GCTGG AGCATCCCGAGCTGATGGCGCTGCCG CTGCCAGACGGCATC  77 145
   pRL110058   73213 ..   73237 -  -9.2  -2.64973   ACCAATGCGAGATCA          GCCCGTCGCC GTCAA AGCGACGGGT          TTGTTTTTCCTCCGA  59 44
   pRL110055   69440 ..   69480 -  -8.1  -5.05079   ACAATCATAGAAAAA  CCCCCACGTCCCGCCGAAG TTC CCCGGGCGAGACGCGCGAA  TTATCACAGGGGTTG  90 48
   pRL110054 NONE
   pRL110053   65540 ..   65556 -  -2.2  -2.63079   GCGCCAGAGAATGTA              TCTGAG CACGC CTCAGG              CCTCCTTGTACCAGA  38 21
   pRL110052 NONE
   pRL110051 NONE
   pRL110050 NONE
   pRL110049 NONE
   pRL110048   59517 ..   59544 -  -7.6  -3.53224   CAGCTTGCTGGGAAA        TCCCGGGGGCGCG ATC CGGGCGC-CGGGA        CGGGGAGAAATTTTG  61 155
   pRL110047   56788 ..   56798 -  -5.4  -3.30389   AATATTACGATAACA                 GTTC CTT GAAC                 ATCCCGTTTTTCTCG  52 4
   pRL110046   55921 ..   55933 -  -3.3  -2.74144   TCTTGATCGTCAAAT                GGCTG CAG CAGGC                TCTTCTGGATCGGGA  40 299
        cyoA NONE
        cyoB   50359 ..   50371 -  -5.5  -2.79183   CTCATGGTCATCACA                CCTGC TCG GCAAG                CAACGCGGTGCGCTT  47 8
        cyoC NONE
        cyoD NONE
   pRL110038   48178 ..   48197 -  -3.4  -4.30576   GCGGCAGGAGGAAAA            TGCGACGC CTCG GCTGCGCA             TCGTCGCCGTCGATG  64 370
   pRL110034 NONE
   pRL110033   40023 ..   40056 -  -9.5  -2.87931   TGCATGCCTGAGATA     GAGCGCCGTGCGTCC TCAC GGACGCACAAAGGTC      GCTTCAGCACTTTCA  63 57
   pRL110032   39525 ..   39549 - -17.2  -5.30616   CCAGGCAAAGAAAAA          CCGAGGCTGC TGGAT GCAGCCTCGG          TTGATGGGCGAAAAT 100 98
   pRL110031   38296 ..   38307 -  -2.2  -3.28712   GCGGTTTTGGGATAA                CGAC ATGC GTCA                 AACAAAACCGTCAGC  44 85
   pRL110030   37008 ..   37025 -  -5.5  -3.05597   TTGATTGCCGAAAAG             GCAACGC GACA GCCTTGC              GACCAGAGGCACCGC  50 186
   pRL110029 NONE
   pRL110028   35460 ..   35473 -  -5.2  -3.09516   TGCGCGAGCAGGCAA               GGGC CGATTT GCCC                CGCCTTCGGCGCGAA  47 215
   pRL110017   23029 ..   23039 -  -2.4  -3.13403   GCTGGCGCAGGAACA                 TGGC ATT GCCG                 TCGTCTTCATGACCG  42 213
   pRL110016   22554 ..   22575 -  -6.5  -2.61264   GTCCCCATCCAGAAG           GCGCGCAGT TGAG ACTGAGCAC            GATCGGGTGCCGCCT  50 63
   pRL110015   21447 ..   21467 -    -4  -3.78775   CGGCTCAGTACGAAA           CCGTC-AGC ACCG GCTCGACAG            GCCATGCCGAAGCCG  56 508
   pRL110013 NONE
   pRL110012 NONE
   pRL110011   10626 ..   10644 - -13.2  -3.16191   GGATAGGCTTATCAA             CCTTCCAG CGA CTGGAAGG             TCAAGCACTATTTTC  75 70
   pRL110010 NONE
   pRL110009    7319 ..    7348 -  -7.9  -4.34912   AATGAAGGAAAAGAA       GCG-GGTCTACGAA GCT CTCGTAGACGGCGC       CATGGAAGGGCTGAC  76 334
   pRL110007 NONE
   pRL110006 NONE
   pRL110005    4993 ..    5014 - -15.1  -4.27316   CGCTTTAATCGAAAA           CGGCCGGGC GTTG ACCCGGCCG            TCGCCTTTAGGTGAG 100 115
