RTCIAT899_CH00005 NONE
RTCIAT899_CH00010 NONE
        aroE NONE
        coaE    3343 ..    3359 +  -2.3  -3.11208   CATAGGAAAGCGGAG              TTTCG ATATGCG CGAAA              TCATTTTCGATACGG  42 36
        dnaQ    4094 ..    4116 + -10.6  -4.54727   AGAATCAAAAGAAAA           TGCCCGGA CGTGCGA TCCGGGCA           TTTTCGTTTCCAGAA  95 53
RTCIAT899_CH00040 NONE
RTCIAT899_CH00045 NONE
RTCIAT899_CH00050    7777 ..    7795 +    -3  -3.53091   CTGTCGCGCCTGAAG             GGGGAGAA GCT TTGACCCC             TTTCGGCGAAGCGGT  49 11
RTCIAT899_CH00055    8188 ..    8199 +  -3.6  -3.60792   TTTTATACCTGATTC                CGGG GCCT TCCG                 TTTGGAACTTCAGGG  51 60
        gyrB   10865 ..   10902 + -20.7  -5.31456   TTGTTCGACGAAGAC   ACAAAAGGCCCGCCGGA TAGT TTCGGCGGGCCTTTTGC    TTTTTTATCGATTAC 100 41
RTCIAT899_CH00075   12980 ..   12990 +  -6.8  -3.29273   GCCGCTTGGGCCGGC                 GCTC GAC GAGC                 TGTTCTGATACTCGA  56 7
RTCIAT899_CH00080   14519 ..   14535 +  -7.9   -3.5594   TTTCCAGCGCGGAGG              GCCGAGC CAT GCTAGGC              TTTCGGAAATCGATT  62 51
RTCIAT899_CH00085   15504 ..   15527 +   -11  -5.28176   CGAGATCATTCTTGA          TGCCGGGGAA GCAA TTCTCCGGCG           TTTTTTATAGATAAG 100 61
RTCIAT899_CH00090   17234 ..   17244 +  -8.2  -2.71011   GATCGGGCCGTTTAC                 CGCG CCG CGCG                 TCCTTGGAACGCGCT  57 227
RTCIAT899_CH00095   17815 ..   17834 + -13.6  -5.27335   GTCACGAGGTCGAAA            CCGGCATC ATCC GATGCCGG             TTTTTCTTTGCCAGA 100 51
RTCIAT899_CH00100   18954 ..   18973 +  -4.9  -3.85698   TATTCATCACGCGGA            GGCCGCT CGGAGT AGCGGCG             TTTCTCCAGCAGGCC  59 339
RTCIAT899_CH00110   20087 ..   20100 +  -5.9  -3.08679   CCTGATAACCTCCAT               TGCCG AATG CGGCG                TCTTCGATGCCCGGC  52 36
RTCIAT899_CH00115 NONE
        trpF NONE
        trpB NONE
        trpA NONE
        accD NONE
RTCIAT899_CH00140   26611 ..   26626 + -11.8  -3.99374   CGGACCAACAAAAAA              CCCCGC CGAA GCGGGG               TTCTTGTTCCTACAG  90 235
        pckA   46518 ..   46548 + -17.7   -4.3739   CGGGAATGACTCACG       TGAAACCCGGCGG CCAGT TCGCCGGGTTTCA       TTTTATCCGGCAGTA 100 51
RTCIAT899_CH00210   47071 ..   47086 +  -3.2  -2.52464   GGGCTGCAGTCTTAG              TCTGGG TGGG CCAAGA               TAGCTTCCCAGGCGA  40 51
RTCIAT899_CH00215   47935 ..   47949 +  -4.2  -3.77196   TTACGGCGCGTTCAG               CCCTGA GCC TCAGAG               TTTCCTGAGTGCTAC  58 20
        hslV   53344 ..   53356 +  -2.7   -2.5383   GAAACGCTCGACGCC                GAAGT CTA ATTTC                CTCTCTTGATTGTTT  40 17
        hslU   54750 ..   54779 + -12.9  -4.64048   GTAAACACTCGACAG       CGGGCCGTTAACT TTTT AGTTAGGGGCCCG        TTTCTTTGTGTCGTA 100 68
RTCIAT899_CH00265   55802 ..   55816 +  -7.1   -4.3739   TCAATGATAAACTGA               GCGAC CTGAA GTCGC               TTTTATAAGCGCGTA  74 3
RTCIAT899_CH00270   57406 ..   57426 +  -7.6  -3.66772   GTCGCTTTCGCGACA           TCTCCC-CC ACAA GGAGGGAGA            TTGTTGGGAGTTTGA  65 95
RTCIAT899_CH00275 NONE
        glcB   62241 ..   62266 + -20.5  -4.66163   AGCCCCAAATAAAAA         GGCCGCCGGAT ACCG ATCCGGCGGCC          TTTTTCAATCCGAAT 100 228
RTCIAT899_CH00290   63874 ..   63888 +  -2.8  -4.09739   TCCCAGCGCACGCGG               TCCG CCGACAT CGGA               TTTTCGGGCACTTCA  57 216
RTCIAT899_CH00340   75911 ..   75925 +  -4.2  -4.07568   TGCCCCAGCGCCAAC               GCCATG GGG CATCGC               TTTTCCACCAGGCAA  61 123
RTCIAT899_CH00390   86550 ..   86567 +  -5.5  -4.05788   CATCTCATACTCAAG             GATGCCG AGCC CGGTGTC              TTTGGTTTGCGAAGA  65 302
RTCIAT899_CH00400   87435 ..   87459 + -21.5  -4.20084   GACGCATACGCAAAA          GGCCCATCCGG TTT CCGGATGGGCC          TTTTGCGTCAATAAT 100 60
RTCIAT899_CH00430   94851 ..   94868 +  -4.1  -3.21099   AGAGAGACTTGCCGT             TGCGC ATGATCTC GCGCA              TTGCTCCTGACCAAA  47 39
RTCIAT899_CH00435   95993 ..   96004 +  -3.6  -3.57144   GGGCGAAGACCAGTC                CGTC GGCA GGCG                 TTTCAGGATCAGCAG  51 346
RTCIAT899_CH00445   98213 ..   98223 +  -4.6  -3.53563   CAGCATCCCGAACAT                 GGTC TTC GGCC                 TTTGCGACACCCTGT  52 458
RTCIAT899_CH00460 NONE
RTCIAT899_CH00465  102404 ..  102433 +  -6.3  -4.87803   AGCGCGAAATCCAGG       AGGCCGGTGTCGC GGAA GTGGCATTGGCCC        TTTTATTTAGGGATC  83 54
RTCIAT899_CH00470  104357 ..  104382 + -12.5  -4.86731   TGACGGACAAAGAAA         AACCCGCCGGG TCGC TCCGGCGGGTC          TTTTGTTTCCAGGCG 100 77
RTCIAT899_CH00490  107819 ..  107854 +  -9.8  -4.67904   CTGATCTGAAAGACG    ATCGGCCCGGTGAAA GAAAAAA TTTC-CCGGGCCGAA    TTTTTCGGCTTGCTA  91 37
RTCIAT899_CH00500 NONE
RTCIAT899_CH00505 NONE
RTCIAT899_CH00510  110176 ..  110202 +  -2.1  -4.21319   GGACCGTAACCACCT         GTCTGGGCCGT AACAA ACGGTCCGTCC         TTTGTTGAAATTGCT  56 32
RTCIAT899_CH00520  111634 ..  111646 +  -3.3  -3.65902   AGGCGGATCACCACG                TCGAC ATG GGCGA                TTTCCATGCCCTGCG  51 187
        fabA  112808 ..  112824 +    -3  -3.05384   GGACCTGCGCGTGGG             CC-TGTC CAAG GACAAGG              TTGCCTGAACCGCGG  43 1
RTCIAT899_CH00535 NONE
RTCIAT899_CH00540  114935 ..  114966 + -13.8  -2.75521   AGCTCCCGATCTCAG      TCGTGTCCTCCCGGT TTT GCCGGGAGGAT-CGA      ATTTCCGGATATCCT  79 40
RTCIAT899_CH00545  115592 ..  115602 +  -2.6  -4.32804   CGCCATTCAATAAGA                 TTTT ACG AAAA                 TTTTAGGTTAATTCT  60 42
RTCIAT899_CH00550  117113 ..  117147 +   -15  -3.17229   ATTGGCGACCAGCAT    CAGCCGCC-CGCCGC CACGCA GCGCCGAGGCGGCTG     TCTTGATCATCGCCT  82 179
RTCIAT899_CH00620  133466 ..  133487 +  -7.9  -3.14132   CATGCCGGAGAGGAA           GGGCAGCACG TTG CGCGC-GCCC           TTCGTCAGCACGCGC  57 517
RTCIAT899_CH00635  135141 ..  135151 +  -2.4  -3.89734   TCATGCCCATGATGT                 CGCG CAT CGCC                 TTTGATCCTTCTTCT  54 358
RTCIAT899_CH00650 NONE
RTCIAT899_CH00655 NONE
RTCIAT899_CH00660 NONE
RTCIAT899_CH00665  139886 ..  139909 +  -9.6  -2.55668   TGACACAGTCACTCT          CGGCGAAC TTTGCTCC GTTCGCCG           GTTCCTATCCGCATG  63 174
RTCIAT899_CH00670  140533 ..  140552 +    -5  -2.66912   TTTCATCAAAGTGGT            TTGTCATG CAGT CATGCCAA             TCGTCTAAGTTGACT  46 231
RTCIAT899_CH00675  141346 ..  141364 +  -3.1  -4.24602   TTCGTCGCGCGACAG             GATGACG AAACG CGTCATG             TTATTTTCGGTGTCT  62 351
RTCIAT899_CH00690  143420 ..  143437 + -14.1  -4.99035   AACGTGATTGAAAAA             CGCGGCC GTCA GGCCGCG              TTTTTGTGTGGCTCG 100 52
RTCIAT899_CH00705  147095 ..  147122 +  -6.9  -3.83998   TCAGCAATCATCGAA        GCCGCCTTCGGC AGATC GCAGG-GGCGGC        TTTGCTATAAAGTGC  65 56
RTCIAT899_CH00720 NONE
RTCIAT899_CH00725  151318 ..  151345 + -14.1  -3.15544   AAAGGCTTTCCACTT        CCGGTCGGCAG AAAATG CAGCCGACCGG         TTGCTCACCATCGAG  78 310
RTCIAT899_CH00745  154869 ..  154890 + -15.9  -3.25942   GTCCCCAACAAAAAA           TCCGGCCGA ATCA TCGGCCGGA            TTGATGTGAAACACT 100 118
RTCIAT899_CH00765  161490 ..  161500 +  -8.2  -4.38712   TCGAGCGGCTTGCGC                 GCCG TGC CGGC                 TTTTCTCCGGATGAG  83 173
RTCIAT899_CH00770  162158 ..  162196 + -24.8  -3.09018   GGCAATGCACTTCAC   CAAAAAGGCCGGCGACTT TCA AAGTCGCCGGCCTTTTAG   CTTTTCAGGTGGTCG 100 184
RTCIAT899_CH00800 NONE
RTCIAT899_CH00805  170627 ..  170648 +  -7.3  -2.90075   GGCGCGCCTGTCAGC           CGATCGC ACTGGTAC GCGATCG            TCTCCTTGCGCGGAG  56 45
RTCIAT899_CH00865  183978 ..  183989 +  -4.4  -3.45945   CTGCGCTTGACGGCG                GAAG TCAG CTTC                 TTAATTATCCATCCG  51 124
RTCIAT899_CH00870  185239 ..  185257 +  -4.4  -3.60792   CCGCGCTCGGCTGCT             GCTTCCGG CTT CCCGATGC             TTTGCCGCTTCGCCC  52 304
RTCIAT899_CH00875 NONE
RTCIAT899_CH00880  186704 ..  186750 +    -2  -3.28712   AGGAGGCGAAAGCCA CCGGCTGAAATTGCGTACGCAT TTG ATGCGGACGCATTGAGCCCCGG TTATCGAACCGGGAC  43 39
RTCIAT899_CH00885  187415 ..  187436 + -15.9  -2.84801   ATGCTGCAAACAAAA           TGGCGCCCT CGTC AGGGCGCCA            TCGTCTTTGGGAATA  86 115
RTCIAT899_CH00895  189630 ..  189655 + -15.5  -3.61894   CTGGTAAGATCAGAA         G-CACCGCCGCA TCT TGCGGCGGTGTC         TTGTTGAGGGCAGTT 100 34
RTCIAT899_CH00915  192518 ..  192543 +    -4  -3.61356   CAGCGCTCCTCCGCC         GGCACGTT CGAACGGAGC AGCGTGCC          TTTAGGCTCGCTGAT  51 383
RTCIAT899_CH00945  199301 ..  199326 + -16.9   -4.8622   TCGAATTCAGCGAAA         GGCCGCGGCAT GCAG ATGTCGCGGCC          TTTTTCGTTCAGGCC 100 49
RTCIAT899_CH00950  200679 ..  200704 + -20.5  -3.45571   AGGGTCGATCGATCG         GGCAACCGCCG TCAG CGGCGGTTGCC          TTCCTATTTCAGGGC 100 138
RTCIAT899_CH00955  202322 ..  202332 +  -2.4  -3.87815   TCAAAGCGAACGGCC                 GGAC AAT GACC                 TTTCTGGCGATCAAG  52 17
RTCIAT899_CH00960  203429 ..  203452 +    -3  -4.07568   TGGGCAAGATAAAGC          ATGTCGCGCA AAAG TGTGCGGCGG           TTTTGCGACAACGAC  58 72
RTCIAT899_CH00965  204808 ..  204830 +  -7.6  -2.91695   AGCCTCTCGCAGCAA           CGCGTCGAAT ATG ATCCGTCGCG           TCCTTTCGACATCGA  56 91
RTCIAT899_CH00980  209766 ..  209791 +  -2.3  -4.68103   CGCAAAAGCATGAAG         CGGCTTTGCGG AAAA CCGCCGCGCCC          TTTTCTTGGGGTTGC  68 50
        polI  213709 ..  213739 +  -7.7  -4.07568   GGCGGGAAAGCAAAA      TC-AGGACTTAGCC GCCA GGCTAAGTGCTAGA       TTTTGCAAGGGCGGG  74 71
        phnF  228133 ..  228160 +  -4.9   -3.6608   GCGGCAACAAGCACA       TTCTGACCG-GCG AGAA CGCGCGG-CAGGA        TTTCCGTCAGGTAAT  54 404
RTCIAT899_CH01110  235517 ..  235527 +  -3.2  -3.56092   TTGAGCCTCGGACAC                 GGTT TTC AGCC                 TTTGCAACGTGATGA  49 37
RTCIAT899_CH01115  237452 ..  237496 +  -2.9  -2.74756   AGCGCCGGAAAGTGA GCCTCTCTTGCAATGAGGGGCC TGCT GGCTCCAAAT-GCA-GAG-GGC TGATTCGGATAGTTT  41 26
RTCIAT899_CH01120 NONE
RTCIAT899_CH01125 NONE
RTCIAT899_CH01130 NONE
RTCIAT899_CH01135  242526 ..  242547 +  -3.8  -3.32268   GCCTCAGCTGGCGCC           GGCAAAATG CGACC CATTT-GCC           TTGGTATCAATTTTC  49 75
        pncB  244079 ..  244105 +  -6.6  -2.64375   CAAGAAGATAGAGCG         TTTTCGCGATTC GAA GAAAAGCGAAAA         TACTCTAACGGTTTT  51 118
RTCIAT899_CH01150  247782 ..  247807 +  -6.8  -2.72991   CGGAAAACAGATAGT         CAAGCCCGGC TTCGAC GCTTGGCTTG          TCGTTGAGGGTCTCG  50 339
RTCIAT899_CH01160  249426 ..  249454 +  -6.7  -3.14881   CTTCGAATTGGGCGG        CCGTCAGATCG CGGAAGC CGATCTGGCGA        TTGATGCCGGCGTTG  54 472
RTCIAT899_CH01185 NONE
RTCIAT899_CH01190  254586 ..  254602 +  -6.5  -2.81289   GCTCGGTCAAAATAT              TCTTGGC AAT GCCGAGG              CTCTTTTGAAATTCG  50 342
RTCIAT899_CH01200  256336 ..  256367 +  -4.4  -3.53012   TTCTTCTGGCGTCCC      TGGCTTGCCTGT ATGGAAGC GCAGGCCAGCTA       TTTCGAAGAGCACGA  52 201
RTCIAT899_CH01205  256918 ..  256966 +  -4.4  -3.58522   TCACTCGCTGCGCCT GCG-CGCGCCGCATCGACCCGG AAGGCGC CCAGGGCGAAACGG-GCGACGC TTTCCCAGTCATACT  54 407
RTCIAT899_CH01215  258544 ..  258565 + -17.3  -4.00532   CATGGATTCGAAAAA           CCCGGCCGA CCCT TCGGCCGGG            TTTCATCTTTCAGGC 100 90
RTCIAT899_CH01225  261037 ..  261051 +  -5.8  -3.31144   GCCAGCAATCCATAA               TTATAC ATC GTATAA               TTATGGAGATGCGAG  54 26
RTCIAT899_CH01230 NONE
RTCIAT899_CH01235  262213 ..  262229 +  -2.1  -3.53012   CGGACAAGGTGGGAT              TCGAACC CAC GGTACGC              TTTCACGCACACACG  47 60
RTCIAT899_CH01245  262981 ..  262993 +  -2.7  -3.90744   CCAATAAAATTGCAG                TTTTG GCC CGAAA                TTGTTTAAAAAAAGG  54 172
RTCIAT899_CH01250  264205 ..  264237 + -12.8  -4.77165   ACTGATATGAAATAA      GGGCGTATGACG GAGCAAAAA CGTCATGCGCCC      TTTTCTTATCCGGAA 100 36
RTCIAT899_CH01255 NONE
RTCIAT899_CH01260 NONE
RTCIAT899_CH01265 NONE
         cdd NONE
RTCIAT899_CH01275 NONE
        deoC NONE
        deoA  271235 ..  271257 +  -6.2  -4.72986   GAAGCAGAGTGCCAT           TCTGCACTCC ATA GGAGTTCAGC           TTTTTCATGAAGCTC  81 101
         flp  277366 ..  277398 + -11.3  -5.82172   GGTTTGGTGCTGCTA      ACGAAAACCGTTCTC TCT GCGAGCGGTTTTCGA      TTTTTTTATCTTGGT 100 82
        cpaA  277971 ..  277993 +  -3.4  -2.72977   AACGCAGGAGTATAG           GAGGTCTTTT TGA AAGGGAGCTC           TAATATATGTCAAGT  41 57
        cpaB NONE
        cpaC NONE
        cpaD NONE
        cpaE  282568 ..  282583 +  -4.6  -2.93708   TCGTTTGATTTCGCA              CGGGCT TCAA AGACCG               ATCTTTTTGAAGGCC  46 41
        cpaF NONE
        tadB NONE
        tadC  286215 ..  286229 +  -7.8  -2.72991   GCAGCAAGCGCAAGT               CGTTCG TAC CGAGCG               TCCTTGGAGGTCTCG  55 114
RTCIAT899_CH01370  287213 ..  287232 +  -8.6  -3.65046   GCTGCGAGATGGCCG            TGCGGAGA TAGT TTTCCGCA             TTCTTGAGATCGCCG  64 348
RTCIAT899_CH01380  289436 ..  289456 + -12.6  -3.40867   GTCGCTGTTGCGACA            TCTCCCCC ACAAG GGGGGAGA            TTGGTTACTCGCTGC  84 101
RTCIAT899_CH01385 NONE
RTCIAT899_CH01390  290921 ..  290932 +  -7.2  -3.74872   TTATGAAAGGCCGAC                CGGC TATC GCCG                 TTTCATCGACTGACT  65 1
RTCIAT899_CH01400  292846 ..  292874 +  -8.3  -2.82193   CACGGCATTCACCTC       TGCG-AAGAGCT TGGCGC AGCTCTTGCGCA        TCTCGTAGGTCTGGT  53 338
RTCIAT899_CH01465  309632 ..  309642 +    -4  -2.87132   GCGGTGTATGGTGTT                 TTGT GAG ACAA                 TCTATGCGAGAAAAG  44 171
       lpsB2  311698 ..  311743 +  -3.1  -3.57263   ACGCGTGCCCTGTCA CCACTCCGT-CGCCTCCTGGAG CAA CTCCAGGAAAAGTGCGCAGCGG TTTGCCGGTCCGGCT  49 41
RTCIAT899_CH01480  313276 ..  313298 +  -7.6  -4.70046   TCAAAGCGAGCGTGG           CTTGCACGTC AAT GTCGCGCAAG           TTTTGTCATTTTCTG  86 90
RTCIAT899_CH01485 NONE
RTCIAT899_CH01490 NONE
RTCIAT899_CH01495 NONE
RTCIAT899_CH01500  317613 ..  317635 +   -22  -3.54424   GTCTGCAAGTCACCG           GGCCGCGCGC ATC GCGCGCGGCC           TTTGGAGCCCTGCCC 100 41
RTCIAT899_CH01505  319124 ..  319149 +  -5.3  -3.08679   CTGAGGTCAGAGCCT         TGGAGCCGGCA TCGA TGACGGCTCGG          TCTTCAGTCGGGCGA  49 334
RTCIAT899_CH01525 NONE
RTCIAT899_CH01530 NONE
RTCIAT899_CH01535  325925 ..  325947 + -14.2   -5.0538   CGATCACGCTCCAAG           CCGCCGAAAG AGA TTTTCGGCGG           TTTTTTCGCGTGCGG 100 116
RTCIAT899_CH01545 NONE
RTCIAT899_CH01550  327115 ..  327137 +  -9.9  -3.22951   GACCAGAGGCGAACG          CGC-TTCCGG CGAA CCGGAATGCG           TATTGTAAGCATCTA  68 321
RTCIAT899_CH01570  329847 ..  329862 +  -6.8  -2.79327   CGCCACGATCAGACG              GCCGGA GTCG TTCGGC               ATTTCCGTCGAGTGC  52 458
RTCIAT899_CH01580  330668 ..  330692 +  -7.8  -3.28712   AGTGCAGGCAGGGCT          TCCGCAGGCC GCGGA GGCTTGAGGA          TTGTAAGAAGCAGCA  59 4
RTCIAT899_CH01585  331354 ..  331389 +  -5.4  -3.68988   TTTTCACTTAACCAG    AGACGCTCGCGCTCA ATCTTGC TGA-CGCGAGCGGCC    TTATCTTCAATGGGA  57 140
RTCIAT899_CH01600 NONE
RTCIAT899_CH01605  334695 ..  334724 +  -7.8  -3.40403   ATGCCGACGCGCTCG       GTCGCCAGCCGGA AGAAC TCCGGC-GCCGGC       TTCTGGTAACCCAGC  59 176
RTCIAT899_CH01615  336403 ..  336421 +  -5.9  -3.28712   CTAAGCTTCTAAAAG             CCTCGCC GGATG GGAGAGG             TTATGGAACAGAAGC  54 102
RTCIAT899_CH01620  337694 ..  337710 +  -7.9  -3.61398   GCGCCTGCACCGGTT              TGCCGCC ATA GGCGCCA              TTCTTGAAGGCGACG  64 381
RTCIAT899_CH01630  339192 ..  339206 +  -4.2  -3.55444   GCATAGCCGACGAAA               CGATCC GGT GAATCG               TTTCGAGCGTCGAAC  52 51
RTCIAT899_CH01635  339655 ..  339683 + -16.7  -2.65547   ACATGATGAAAAAAC        GAAAGGCCGGTCC GAG GGGCCGGCCTATC        TGCGTTTAACAGTTT  89 94
        infC  342192 ..  342208 + -13.7   -5.1417   AGTAGAGAGGCCGGA              GCCGTCC CTT GGACGGC              TTTTTCCTTTTCTGC 100 53
RTCIAT899_CH01655 NONE
        rpmI  342683 ..  342693 +  -5.4  -3.14229   ACTACTTGCCGAACG                 GTCT CTA AGAC                 TATTCGTAACGCTAT  50 18
        rplT  343165 ..  343199 + -16.5  -3.64984   TTCGTAAATTCATTA     TGAAACCCGCGCTGG CGAAA CCGGCGCGGGTTTTG     TGTTTTGCAGCATAT 100 58
RTCIAT899_CH01670 NONE
        pheS NONE
        pheT  347039 ..  347059 + -12.6  -3.19463   TGTCACTTCGTGACA            TCTCCCCC ACAAG GGGGGAGA            TTGGTAACTCGTGGA  83 82
RTCIAT899_CH01705 NONE
RTCIAT899_CH01710  358700 ..  358715 + -11.8  -3.21925   GATAGCAGTCCCATA              GCGCGC GCCA GCGCGC               TTCGTCGTCGGGTCT  69 404
RTCIAT899_CH01725  360971 ..  360983 +  -2.6   -4.1585   GGATGGCTGGGAGCC                GGTC TGAGC GGCC                TTTTAGGGGTTCTGC  56 19
RTCIAT899_CH01740  364797 ..  364810 +  -2.3  -3.57792   CCTCTTTACCAAGAA               CCAGT TTGC ACAGG                TTTACGCGTGGATGG  47 362
        xseA NONE
RTCIAT899_CH01755  367553 ..  367565 +  -5.5  -3.63569   GCGGGCGCCTTCGTC                GGTGT CGA GCACC                TTGTTCAGCACTTCC  57 411
RTCIAT899_CH01785  370860 ..  370882 +  -6.4  -3.34398   TTGACATCTTCATCA           TATATATGCA CAC TGCATACATA           TATTTCGAAGGACGG  56 57
RTCIAT899_CH01790  371552 ..  371563 +  -5.8  -4.17048   ACAGAGAGCTTGCCC                GGCA GCCT TGCC                 TTCTTTTCCCCCGGC  68 465
RTCIAT899_CH01810 NONE
RTCIAT899_CH01815  377759 ..  377780 +  -5.8  -3.05384   CGACGGGAAAGGGCG           GCTTCCTC ACCCGA GAGGCAGC            TTCCATCGCCGCAAA  49 357
RTCIAT899_CH01825  379334 ..  379347 +  -9.5  -3.53012   GCCCGGAGGCTGATG               GCGGC ATAG GCCGC                TTTGCCGAGAAACGC  66 250
RTCIAT899_CH01840  382169 ..  382198 + -10.1  -3.33696   TAATCATTGCCCGGA       GGCCTGATCTGC AGAAATA GC-GATCAGGCC       TTCGTTGCGAAGCAA  70 59
RTCIAT899_CH01850  383510 ..  383527 +  -6.3  -2.71731   TGGCTTGCATATTTT             CGATACT GTAT GGTATCG              TAATTCAGGAATAAC  50 52
RTCIAT899_CH01855  384672 ..  384685 +  -3.7  -3.30441   TCGCGTCGGCTTCGC               GCAGG ATTT CCAGC                TTCTCGCGGGTGATG  47 482
RTCIAT899_CH01880  389435 ..  389463 +  -7.5  -4.08692   GCGTTACCGACGTCC       CTTCGATCGGTG ACGTCA CACCGA-CGAGG        TTTTCAGCGCGGTTG  68 229
RTCIAT899_CH01930  400679 ..  400696 + -12.7   -4.7254   TCCTGGAAAAATGAA             GGCCGGT CAAA ACCGGCC              TTTTTCATGCCCGAT 100 62
RTCIAT899_CH01970 NONE
RTCIAT899_CH01975  407320 ..  407342 +  -3.4  -4.56597   CAAAATCAGCCTATT          GCCG-G-GCG ACCAG CGCTCGCGGC          TTTTTCGCCGGCGCA  67 63
RTCIAT899_CH01980  408421 ..  408431 +  -2.4  -3.06796   GGTTTCATGAACCGC                 GCCG TTA CCGC                 TTCCATGCGATGAGA  42 66
RTCIAT899_CH01985 NONE
        gshB  410075 ..  410114 +  -2.9  -3.73104   AGCTGAACGATCATA  GTCACCCAGGCATATCGA TGATT TCGACGTGCTT-GGTGAA  GTTTTTGTTCGTTTA  51 64
RTCIAT899_CH01995  411815 ..  411832 + -12.7  -3.58269   GCTCAAAATGAAAAA             GGGGTGC CGCA GCACCCC              TTTCCCAATCAGTTG  85 79
RTCIAT899_CH02005 NONE
RTCIAT899_CH02010  414406 ..  414451 +    -9  -3.44229   GCGCATGGCTTTCGA GGCACAGCGTTGATGCGG-AGCG TTT CGCTGCCGC-TCGCCGCCG-GCC TTCTGGTGCTCGCAT  66 13
RTCIAT899_CH02015  415070 ..  415096 +  -3.7  -3.73775   CCGGCCGCATGAAGC        TGCGCTCGTAGC TGAT GATAC-AGCGCG         TTTCCTCGCCATACG  53 51
RTCIAT899_CH02030  416861 ..  416885 +  -4.3  -3.53091   TCGGCGAAAGCATGA         GCGGC--CCGA CAATA TCGGCCGCCGC         TTTGCCGCGCACCAT  52 26
        prfC  419880 ..  419917 + -12.7  -3.33815   GCGTGATCCGGGAGA   CCTTGCG-GCCACGGGCG CTC CGCCTGTGGCTCATAGGG   TTACTTCCCCGCGGT  84 35
RTCIAT899_CH02060  422541 ..  422559 +  -3.8  -2.70932   GCGTGAAGTAGGCTC             TGAGGTCT AGG AGGCATCA             TGGTTCGGGAAAACG  43 30
RTCIAT899_CH02065  423444 ..  423469 +  -6.1  -3.51825   GGTCGAAGAGCATCG         GCGGGTCCTTT TCGC AAAGGGTCAGC          TTGTAATTGCCGTCG  55 380
RTCIAT899_CH02080  425912 ..  425930 + -10.3  -3.13403   CCGCGCCAGCGCTCC             TGCCGCT CCTGC AGCGGCA             TGTTGATGGCCCGGG  65 127
RTCIAT899_CH02095  429566 ..  429592 +  -4.3  -2.55668   GACGATGAAGTCGGC         GCCCTTGCG CTCCAGCTT CGCGCGGGC         ATTGCTCTCCACATC  43 186
RTCIAT899_CH02105  431641 ..  431659 +  -4.5  -3.72893   CGGCGAGCGTTTGCG             TCAGACC GATCA GGCCTGA             TTTGCTGGCGGCATA  57 380
RTCIAT899_CH02115  433530 ..  433551 +  -7.1  -3.45366   TGAAGGGTTCGCCCG           CGAGCGCCG CAAC CGGCACGCG            TTCCTTACTTGCCAA  58 337
RTCIAT899_CH02125 NONE
RTCIAT899_CH02130  435854 ..  435870 +  -5.1  -3.74693   GGACCATAACCTGAT              CGAAGTT TCC AACATCG              TTTCCTGAGATCGCA  58 1
RTCIAT899_CH02135 NONE
RTCIAT899_CH02140 NONE
RTCIAT899_CH02145  437613 ..  437626 +  -3.1  -3.08679   CCAACTCGGGGCGTT               G-CTGC TCG GCAGGC               TGTTCCGTCGCCGCC  43 452
        mutM  449693 ..  449704 +  -2.2  -2.70932   TCTTTCTACTGCGCC                TCCT GCCA AGGG                 TGATTGACGGGCCAA  39 11
RTCIAT899_CH02205  450598 ..  450625 +  -2.8  -3.15579   ATATGCCCGCCACAG        TT-TGGAAAGCCG CTC TGGTTTTCCGCAA        TTGCTCCCGCATTGC  43 108
        rpsT  451017 ..  451036 + -12.1  -4.74103   TATCGTTAGTATTAA            GCCCGGC CCTCGC GCCGGGC             TTTTTGGATTCAGCC 100 58
        dnaA  453438 ..  453459 + -14.4  -4.65263   TCACCACACGAGCTA           CGGCCGGC TTCATT GCCGGCCG            TTTCTTTTGGGCGAT 100 56
RTCIAT899_CH02225  455896 ..  455909 +  -8.1  -3.19192   GCTCGACCATCTCGA               GCCAG CTCT CTGGC                TTACGTTCGGTCGCC  57 453
        hrcA  460206 ..  460249 +  -2.3   -3.4252   GCTCGGTCAGAAGAT GACCGCCGCAGACTGTGCAC CACTT GCGCACGCTCTTCT-CGGTC TTCTGGTAGCTGCCG  47 337
        grpE  461337 ..  461371 + -21.6   -4.7629   CAACGCCACTAAAAG     AAAGAGCCGGACGATC TCT GATCGTCCGGCTCTTA     TTTTTGCCTTGGTCC 100 53
RTCIAT899_CH02295  467955 ..  467972 +  -5.5  -3.18912   CGGCCTGCTTTCTGT             TTGGCAG GGTG CAGCCAA              TTGATAAATCAATGA  52 4
        ihfB  468373 ..  468392 +  -7.1  -3.17075   TTGTCGGACATGATT            GTGCCGC GACGCG GTGGCAC             TTGAATTCAGCCGCC  56 87
RTCIAT899_CH02305  468850 ..  468870 + -12.5  -2.62184   CTTTATAATCCCCTT            CCGGCGACG CGC CGTCGCCGA            TGATCTCGAAGCCGA  68 64
RTCIAT899_CH02320 NONE
RTCIAT899_CH02325 NONE
        lspA NONE
RTCIAT899_CH02335  474848 ..  474860 +  -3.3  -4.08216   GAAAAATTGCAATGG                GCACG GTT CTTGC                TTTTAGCAAAGCTGC  58 164
        olsB  475905 ..  475957 +  -9.9   -2.9039   GGCGTGAGGCCGCGC CTCGTCATCAGCTCGGCTGCGCGA GGATGA TCGAGCA-CCGAGCTGGTTGCGAA TATCTCGCGTGATGT  62 110
        mutS NONE
RTCIAT899_CH02360  482849 ..  482865 +  -5.1  -3.13403   AAATCATGGAAAGAC              CAGGC CCAGAAT GCCTG              TGTTAATCGCGGGCC  50 96
        glnD NONE
        mviN  487418 ..  487444 +   -18  -2.52676   GGGAATAACAAGGCT         CCTTCGCCCCGC AAT GCGGGGAGAAGG         TGGCTTGGCGCGATC  95 33
RTCIAT899_CH02375 NONE
       trpS1  489229 ..  489269 +  -4.5   -2.7555   TTTCTCTATTGATAT  CGGCATGCAGGCCGCCG CCTGAAT CGGGGGCTTGCAAAACG  TCGTCTTCGGGTGTC  45 29
RTCIAT899_CH02385  489828 ..  489846 +  -5.3   -4.2142   CATTCTCTTGAATAG            GAT-GGCC AAAA GGCCTATC             TTCTTTTGAAATATT  65 66
RTCIAT899_CH02390  490481 ..  490491 +  -2.6  -3.62572   GTTTAATATTTAGGC                 TTTT CGG AAAA                 TTTGACATGATCGTA  50 35
RTCIAT899_CH02395 NONE
RTCIAT899_CH02400  491708 ..  491736 +  -8.8  -2.58544   TGCGACAAAACAAAT        GGATAGAGCGAC AATTC GGCGCTCTAGCC        CTTGTCACAGTCCGA  59 82
         mur NONE
        olsA  493025 ..  493036 +  -5.8   -2.7563   TCGGGCGCGAGATCG                CCTG ATTC CAGG                 TGATTCCAACTTTTT  50 21
        miaB NONE
RTCIAT899_CH02420 NONE
RTCIAT899_CH02425  496247 ..  496265 +  -4.4  -3.28712   TCCCACTCTTCCTTC             TGGGCACG TGC CGCGCGCA             TTCTGCGCCCGGCAC  49 162
RTCIAT899_CH02430  497315 ..  497332 +  -4.8  -3.60316   CAATAAATGGCGCTT             CAGCGG GACAAA TCGCTG              CTTTTTTGAAAGACT  52 35
         lnt  499059 ..  499071 +  -5.5  -2.58544   GCCTTGGGGGCATCG                GCTGC AAC GTAGC                GTTATAGGGGTGGAG  46 99
RTCIAT899_CH02440  499597 ..  499615 + -13.8    -4.323   TCGAGAAAGTCGGAA             GGCGGCCG TTT TGGCCGCC             TTTTCGCTATTTAAG 100 66
        metK NONE
RTCIAT899_CH02450  501858 ..  501877 +  -6.4  -3.17792   GTCGGGCGACGCTCA            TGGTCAGT GCAG GCTGACCG             TCTTCAATTCGTCTT  54 183
RTCIAT899_CH02465  503895 ..  503928 + -19.7  -2.77118   TCTGATTAACTTATC     AAAAAGGCCGCCGGA GCGA TCCGGCGGCCTTTTG      TACCTTTTACCTATC 100 36
RTCIAT899_CH02485 NONE
RTCIAT899_CH02490 NONE
RTCIAT899_CH02495  510141 ..  510172 +  -7.2  -2.63858   AGGCGGCTAGCATTG      GACCCGATGGC-GTG TAC CGCCGCCGCTGGGTC      ATTCTAAATCTGATA  54 31
         fmt NONE
        truA  512355 ..  512368 +  -3.8  -3.34517   AGCCTCAGGAAAAAG               GCGA GGCCCG TCGC                TGTTTCCGGCGGCAT  47 423
RTCIAT899_CH02525  515862 ..  515899 + -25.7  -3.92602   ACGGTCACTGAAAAC   CGAAAGCCCGCCATCGC TTGG GCGAGGGCGGGCTTTCG    TTTGTGGACTATTGC 100 30
RTCIAT899_CH02540  518970 ..  518985 +    -9  -3.05963   CCGACGAAGCCGAGA              TCGAGC ACGC GCTCGA               TGTTCGAATCCGGGT  60 523
RTCIAT899_CH02550 NONE
RTCIAT899_CH02555 NONE
RTCIAT899_CH02560  521541 ..  521578 + -14.2  -2.90061   CCTCATCGGCAACAG   GGCCGTCGTCTCCTGAT ACGAG GTCAGGGG-CGGCGGCC   TCATTGTATCGATGT  86 42
RTCIAT899_CH02575 NONE
RTCIAT899_CH02580 NONE
        arsC NONE
RTCIAT899_CH02590  525679 ..  525696 + -14.1  -4.52703   GCCAAATAACGAAAA             GCCCCGC CGAA GCGGGGC              TTTTGTCGTCATTTC 100 91
RTCIAT899_CH02605  530507 ..  530538 + -20.8  -3.70811   TCCGTCAGATATGAG      GCCGGCTGCGGCGC CTGA GCGTCGCTGCCGGC       TTTCGCCTTCTGTCA 100 41
RTCIAT899_CH02610  532545 ..  532560 +  -8.2  -3.90744   GATGTCTATCCGAAA              GGCGCG ACCC TGCGCC               TTCTTTACGCGCCCC  71 398
RTCIAT899_CH02620 NONE
RTCIAT899_CH02625  534809 ..  534839 +  -5.5  -2.66272   GTTGTTGATCCAGAT      TGCGGTGATCC-CA AGCC TGCGGATCATCGAA       TGCGTTTGAGTGAAG  46 45
RTCIAT899_CH02630  535813 ..  535823 +  -8.2  -2.88999   TCCGTTTCATTGCGT                 GGCC CCC GGCC                 TGTGATCTGTCGCCA  59 74
RTCIAT899_CH02645  538417 ..  538449 + -17.1  -3.53811   AATGTGAAACAGATC      GGAATCCCTCTCCGT TCC GCGGAGGGGGATTTC      TTTCAGACCGCTGCG 100 39
      pmtXch  540265 ..  540275 +  -8.2  -2.71924   ATCAGCGCCTGAGGC                 CGGC AAG GCCG                 ATTTGGGGCGGCCTG  57 29
RTCIAT899_CH02660  540992 ..  541014 +   -12  -2.56095   AGCCGCCCTGATCGG           TCGCGACGCA TCG TGCATCGCGA           TGCATTGCATATGCC  72 63
RTCIAT899_CH02665  542393 ..  542426 +  -3.9  -5.80817   GCCAATCCGGATCAA     G-AGCCCGATGC ATCCTCCTCCC GCGTCGGGCTTC     TTTTTTTATCTTCCC 100 368
RTCIAT899_CH02670  544000 ..  544011 +  -5.8  -2.60194   ATGGAGGCAGTCAGA                TGGC GCCG GCCA                 ATTGGTTGGCCCGAT  49 121
RTCIAT899_CH02675  545136 ..  545151 +  -3.2  -4.11216   GGCAGGGAATCGGTT              CTGTCC GCAT GGAGAG               TTTTGCCCCTCACCC  58 47
        frcB  548309 ..  548344 + -14.1  -3.28712   TGATATAATCCCTTC   GG-GAGCCGCGTCATGC GCCT GC-TGGCGCGGCTCTCC    TTATAAGGGAGCAGA  95 56
        frcC NONE
        frcA NONE
RTCIAT899_CH02705  550952 ..  550965 +  -3.7  -4.17048   CTCGCCCATCATTTA               ACCGC CGTC GCGGA                TTGTTTTGCGAGGGC  60 42
RTCIAT899_CH02710  552197 ..  552215 +    -4  -5.20331   CCGCAATATGAAACG             TATATTTT GTT GAAATATA             TTTTCTTTATTATTT  81 103
RTCIAT899_CH02715  553819 ..  553831 +  -7.7  -3.22388   GATGAAGGGCGAGCG                CACGA TCG TCGTG                TTGATCGATTGCATC  57 379
RTCIAT899_CH02725  554903 ..  554913 +  -2.4  -2.75382   TCCCTGCCGATCTTG                 GAGC ACT GCGC                 TGATTGCCTCCGGTC  39 12
        pyrE NONE
RTCIAT899_CH02735  557029 ..  557086 +  -4.6  -3.95986   CACATTCCTTATTTC GCGCGGCTGGCCAGCGCAGCCACTA-GC CCCT GCGTCGAGGAATCG-TGGCCGGCAGCGC TTTCCTTGCCTTCGA  60 311
RTCIAT899_CH02750  561275 ..  561306 +    -7  -3.97051   CGCGCTGGCGGAACT      GCCGGATGCCCCGC CGAG GCGGGGCCGGCGTC       TTGTTTGGGCTATTT  68 42
RTCIAT899_CH02760  562457 ..  562493 + -12.4  -3.14051   ACCTCGCCCAGTCCC   TTGGC--GGCGACGGTCG AGC CGATCGTCGCCGTGCCGA   TATTGATGACGGTCG  74 211
RTCIAT899_CH02785 NONE
RTCIAT899_CH02790 NONE
RTCIAT899_CH02795  568466 ..  568485 +    -2  -2.94099   GATAGCGGAACTTTC            GAAGGCGC TATT GCGTTTAC             TATATCGTCCGGAGG  40 88
RTCIAT899_CH02800  569377 ..  569392 +  -3.2  -3.57561   GAATGGCGGACGCCA              CCGG ATGTGTGG CCGG               TTTCAACCATTACCA  49 453
RTCIAT899_CH02830  574386 ..  574424 +  -5.3  -4.24948   AGGACGGTCCAGGGA  GCGTGGTCCGTATGC-GTA TCC TTCAGCATGCGG-TCGCGC  TTTTCGCTGTAATCC  68 367
        phoR  576619 ..  576641 +  -4.2  -3.53224   CTTCTGACAAGTTCC          TCG-CATCC TCATTC GGATGGCGA           TTTACACAAACAATA  52 34
       pstS1  577846 ..  577856 +  -2.4  -3.63627   GCTGAAGGGTCAGGC                 ACCG GTG CGGC                 TTTCCGCTGTACCGG  50 43
       pstC1 NONE
       pstA1 NONE
       pstB1  581544 ..  581554 +  -2.4  -2.73159   GGTTGATGATGGCAG                 GCGC GCG GCTC                 ATTTCACACAGTTCA  39 35
        phoU  582275 ..  582296 +  -2.2  -2.62184   GGACGATACCGCCAA           TACCGTCG GCGCAG TGACGGAA            TAATCTGGAAGCGAA  38 1
        phoB  583061 ..  583077 + -11.5  -4.63044   GGCGGAAACAGAAAA              CGGGCCT CAA GGGCCCG              TTTCTTTATCTCAGT  95 72
RTCIAT899_CH02880  585268 ..  585309 +    -8  -4.72201   AAATCGGCTTGAACT CAACGCCCGCAATTGGGGCG TTCC TGCCCC-AC-GCGGGCGTTA TTGTTTTTTCTGGAG  90 29
        argF NONE
        hslO  587730 ..  587740 +  -6.8  -3.21416   ACATAACGGTCATCA                 TCCG GAT CGGA                 TTGCTCCTCCAGATA  54 351
RTCIAT899_CH02900  589456 ..  589470 +    -7  -2.69964   GCTCGAAGGCGACCA               GCGTCG AGC CGCCGC               TCATCTGCTTGGCGA  50 353
RTCIAT899_CH02910  591677 ..  591704 +   -12  -3.05343   GGCTGTGATCCACAC        TTTGGCGGCCTT GACA GAGGCCGCCAAC         TATTGGACATCTCAA  76 33
RTCIAT899_CH02925  594048 ..  594068 +  -2.4  -3.36327   GCGCGCATCTGAACA            GTGCAGGC AACGG GACAGCAC            TTGTGAATGCACTGC  45 29
RTCIAT899_CH02930 NONE
RTCIAT899_CH02935  595768 ..  595778 +  -8.2  -4.18197   AGCAATTTCAGGAAA                 CCGC GCA GCGG                 TTTTCCGTCCGGAAT  77 44
RTCIAT899_CH02960  599295 ..  599311 +  -3.7  -2.72855   ACGGTGCCCACGTAT              TTCCG GAGATGG CGGAA              TGATTGGCGCCTTTC  43 6
        pyrD  600379 ..  600407 +  -7.3  -2.76815   GCCAAGCTGGATTAC        TGGGCGAACCGGA ACG TCTGATCCGCCCG        CTTCTTCAGGCCCAT  55 5
RTCIAT899_CH02985  603609 ..  603619 +  -4.6   -3.1634   CATTCTGTTCATTAC                 CCGG AAA TCGG                 TTGGATGATTTCGAA  49 7
RTCIAT899_CH02990  604707 ..  604720 +  -9.5  -4.04806   CAATTCGATGATTGT               GCGGC GGAT GCCGC                TTCTTTGATCTGCCG  80 365
RTCIAT899_CH03000  606098 ..  606117 + -16.4   -5.0925   GAAGCCAATAAATGA            CGCGGGGC CTTC GCCCCGCG             TTTTTCGTTTTGGAA 100 70
RTCIAT899_CH03015 NONE
RTCIAT899_CH03020  611036 ..  611060 +  -4.8  -3.60475   GTGAATCGATGAGCT          TCATCGGCCG TTGTT CGGCCGCCGG          TTTGAAGTGCGGATT  54 93
RTCIAT899_CH03030  612221 ..  612249 +  -7.3  -2.92175   AATGCCATAGGTGAT        CGGCCGCTGATGC GCC GCATCCGTGATCG        TCTGCTCTATTCCCG  51 104
RTCIAT899_CH03050 NONE
RTCIAT899_CH03055 NONE
RTCIAT899_CH03060  623624 ..  623648 + -14.2  -5.29846   TGACGACCAATAACG          GGCCGCGCCC CTGTC GGGAGCGGCC          TTTTTGTTTGCCATT 100 57
RTCIAT899_CH03065  625226 ..  625247 +  -8.7  -3.53012   CGCGTAGATGTCGGC           GGC-TTCGGC AAA GCCGAGCGCC           TTTGACAGAAAGCCG  66 115
RTCIAT899_CH03075  627102 ..  627112 +  -2.4  -3.39895   CCTGAGCTACATCCA                 GCGG CTT CGGC                 TTGGTTGCTCGCAAC  45 79
        mscL  627752 ..  627777 +   -14  -4.24342   CGACTTTTTTTGCAA         GCCCCGGTCC ATGCGA GGACTGGGGC          TTTATTCATCACCAA 100 52
RTCIAT899_CH03085  629113 ..  629133 + -12.6   -2.9587   GTCGCTTTCGCGACA            TCTCCCCC ACAAG GGGGGAGA            TCGTTTGGAGTTTGC  79 101
RTCIAT899_CH03090  630485 ..  630497 +  -3.4  -2.77962   CACGCTATAACGCGA                CTGA CGATC TCAG                CTTTCCCGTCTCCAG  41 31
RTCIAT899_CH03100  632835 ..  632882 +    -4  -2.73159   TGTCCGCGACACATC CGC-ATGAAGAGCCCCGGGTGG TTTTGT CCGCCCGGGGA-CTGCGCCGCG ATTTCGGCGGCTTCA  43 62
RTCIAT899_CH03105 NONE
RTCIAT899_CH03110 NONE
RTCIAT899_CH03115 NONE
RTCIAT899_CH03120  636287 ..  636330 +  -6.7  -3.57792   TACCTCCTGGCCCCT CACCCTAG--CCCTCTCCCCG CAGG CGGGGAGAGGGAACTACTGAG TTTGGACATGGATCG  60 137
RTCIAT899_CH03125 NONE
RTCIAT899_CH03130 NONE
        mmsB  640072 ..  640094 +  -6.1  -3.53091   ATCGACGCGCACCTC           GCGCGCCCG AATGG CGGCAGCGC           TTTCGGCACGCGCCT  55 162
RTCIAT899_CH03145  643252 ..  643282 + -22.6  -4.43213   TTTCGTAAGCGGCTG       GTGGGCATGCCCGG AAG CCGGGCATGCCCTC       TTTTCATGTGTTAAG 100 33
RTCIAT899_CH03170  650396 ..  650411 +  -8.2  -2.71712   AGTTTCATGCACATG              CGGGCC GACG GGCCTG               ATTTCAGACAACGAG  57 47
        cheX NONE
       cheY1 NONE
        cheA NONE
        cheW NONE
        cheR  654770 ..  654789 +  -4.2   -3.8512   CCGCGGGGAGGAAGC            CATGAACG CTCT CGCTCGTG             TTCTTGTCGTCGATG  58 21
        cheB NONE
       cheY2 NONE
        cheD NONE
RTCIAT899_CH03215  657344 ..  657356 +  -3.4  -3.10677   CGAATCGTGCGAGAA                CAGA ATGAA TCTG                TTAAATCAATTAGTT  43 185
        fliF  659031 ..  659050 + -13.6  -5.36441   GCAGCCTGATGGAAG            GACCGGGA AATC TCCCGGTC             TTTTTTGTCTAGGCA 100 32
RTCIAT899_CH03225 NONE
RTCIAT899_CH03230  661142 ..  661161 +  -2.1  -4.26076   GTGCGTCCCTCAGGC            TGCGTGCG AGCAG CGC-CGTA            TTTTCGTCCGGGTCG  60 127
        flgF NONE
        fliI NONE
RTCIAT899_CH03275 NONE
        flgB NONE
        flgC NONE
        fliE  670500 ..  670523 +    -3  -4.15396   TACGAAGATGCAGAT          CTAGTGCGGG GTTT TCCGCTCTAA           TTATTTGATTTGGCG  58 22
        flgG  671485 ..  671521 +  -4.2  -3.55563   TCGTGTTTGCGTCGC    CTACACCCGCCGGTGC GCAGA GCACCGATGGAGGAAG    TTTCGGAACTGCCGT  52 121
        flgA NONE
        flgI NONE
RTCIAT899_CH03310 NONE
        flgH NONE
        fliL NONE
        fliP  675555 ..  675599 +  -7.8  -3.61517   CCACTGATATGAAAA GCGCAAGACGATCATCGGAGC CACA GCCCCGATGATCG-CTGAAGC TTATTCGGCCGCGAT  62 34
RTCIAT899_CH03335  678839 ..  678860 +    -8  -6.18768   TAAACAACAAGTTAA           CCG-CGCCT GTCTA AGGCGTCGG           TTTTTTTTATATTTT 100 77
RTCIAT899_CH03340  680006 ..  680029 + -18.2  -4.78661   AGAGATAAGCCTTCG          CCGCGCCTTC TCCG GAAGGCGCGG           TTTTCGTTTTTGGCT 100 76
        flaC  684183 ..  684205 +  -4.1  -3.79071   GCCTTGACTGGAGCT          TG-CGTTGCG ATCG CGCGGCGGCA           TTTCCCTCTTGTCGC  56 41
RTCIAT899_CH03360  685461 ..  685474 +  -4.5  -4.15453   TCCTCGCACAAGTTT               GACTG CCTA CGGTC                TTTTGCAATGGCTTG  62 83
RTCIAT899_CH03365 NONE
        motB NONE
        motC NONE
        motD NONE
RTCIAT899_CH03385  691251 ..  691262 +  -2.2  -5.29782   AGTGTTAATCATACG                CTTG CTAA CAGG                 TTTTTTATCGGTGTA  81 126
RTCIAT899_CH03390  692141 ..  692172 + -20.4  -4.19746   GTTAAAGCCTGCTGA      TAAGCCCGGAAATC CCTT GATTTCCGGGCTTA       TTCTTTTGCAGTGCG 100 65
        flgK NONE
        flgL  695146 ..  695166 +  -6.9  -2.78384   TTAAGTCTCGTAAAT            TACCTTTGA TGA TCAAAGGGA            TGTAATGACCAGGAA  52 17
        flaF NONE
        flbT NONE
        flgD NONE
        fliQ  696876 ..  696898 +  -9.8  -2.66316   GGTCGGTTCCAATAG           GGCAGGCGGT TCA GCCGTTTGCC           TCCTCTCATGAAGAG  63 123
        flhA NONE
        fliR NONE
RTCIAT899_CH03435  700330 ..  700347 +  -8.4  -4.19817   CGACATGCCCTGACA             CGAGCG CTGAGC CGCTCG              TTTTCAGTGCATGCG  77 104
RTCIAT899_CH03440 NONE
RTCIAT899_CH03445 NONE
RTCIAT899_CH03450  701967 ..  702008 + -16.1    -3.272   CTCCTGATAGCTTCT GACAAATCCAACCTTCCTT CCTA ACGGAAAGTTGGATTTGTC  TTGCTATAAACTGCT 100 106
RTCIAT899_CH03455  703029 ..  703071 +  -5.6  -3.36569   CAAGGAAACAAGAGC CTAAAGCGTTTTCGCGATTC GAA GAAAAACGGAAATGCTTTGG TATTTGCGGGCTTGG  53 86
RTCIAT899_CH03460  705142 ..  705163 +  -5.9  -3.41878   ATAGGGCGTTTGCAG           GCCATTCCAT GGA GTGG-ATGGC           TTGTAGATTGCCAGC  56 83
RTCIAT899_CH03465  706245 ..  706263 +    -3  -4.14392   CGATGAGCGCGTGGT             CGTCAACG GCA CGGTGAAG             TTTTCCGGCTTGAGC  60 169
RTCIAT899_CH03475 NONE
RTCIAT899_CH03480 NONE
RTCIAT899_CH03485 NONE
RTCIAT899_CH03490  712760 ..  712774 +  -3.4  -3.10071   TATTCCGGCCTGGGG               CGCCTG TTT CGCGCG               TCTTGCCTGACCTTT  43 1
RTCIAT899_CH03495  713980 ..  713990 +  -3.2  -2.78762   CTTCTGTTAAAGACC                 GGCT GAT AGTC                 TCCTCTTCATAATAT  41 111
RTCIAT899_CH03500  714536 ..  714548 +  -3.3  -4.25283   AAGATACTTGATCAG                CGGCA GCC TGCCA                TTTTCCTGCAGCCAT  62 123
RTCIAT899_CH03510  716571 ..  716596 +  -6.8  -3.31144   GGAAACCGCGATCTT         GCAACACGCCG AGCGC CGGCGTGA-GC         TTGTGCAGCTCGGGC  56 390
RTCIAT899_CH03540 NONE
RTCIAT899_CH03545  725245 ..  725271 + -17.4  -3.10939   TCCCGCATCTATTAC         GGTTAGCCGCGA GGC TTGCGGCTAACC         TCTGGTTTTCACGTT 100 58
RTCIAT899_CH03550  725544 ..  725564 + -12.5  -3.05935   CGCCCCATTGTTCCT            GGCTGCCGC CCC GCGGCAGCG            TTGGCTCGCGCATAT  81 48
RTCIAT899_CH03555  728405 ..  728435 + -21.9  -4.90013   ATTATTGCCACTGCA       GGCGGATCGGCCG ATTTC CGGCCGGTCCGCC       TTTTTCATTGCCTTG 100 49
RTCIAT899_CH03560  729622 ..  729642 +  -7.6  -3.01712   CAGGTTTGAAAATGT           TCGCGAGCG AGAA CG-TCGCGA            TGTTAGCAAAGCCGG  57 71
RTCIAT899_CH03565  730977 ..  731000 + -19.6  -3.99678   CCAATAAATCGAAGC          GGCCCGGACG GCAA CGTCCGGGCC           TTTCCTTATGAGGAT 100 34
RTCIAT899_CH03570 NONE
RTCIAT899_CH03575 NONE
RTCIAT899_CH03580  734192 ..  734210 +  -7.4  -3.26717   TTGAAGGTGATCGTT             TCGTTGCG GCC CGTAACGG             TTGCGTTCTGTACCT  54 243
RTCIAT899_CH03590  738203 ..  738221 + -11.7  -5.72207   AGCATGAACTTCAAA             GGCAGCG CGATT CGCTGCC             TTTTTTTCGTTTCGC 100 214
RTCIAT899_CH03595  740299 ..  740329 +  -9.7  -2.89191   TTAATTTCCATCTCC      GAGTTCAAGGGGGC GACC GCCCCCTTGG-CGC       TATCTCCGCATCTCC  65 37
        chrB NONE
        chrA  744021 ..  744050 +  -6.3  -2.72829   CTCACTGGGTCAGTG       GCCCGGAAGGAGA TTCG TGTCCTCCCGTGC        ATTTGCGGGGATCTC  50 52
RTCIAT899_CH03615  744970 ..  744991 +  -5.1  -3.33696   CCTGCGGCTGCACAA           GCGA-CACCG CTT CGGTAATCGC           TTCGTTCAGGCCGAC  49 475
RTCIAT899_CH03625  748904 ..  748936 + -14.2  -4.54727   TCCCAAGGCACGAAT     GTCCCGTTCCCAGGT GAAA GCCTGGG-GCGGGAC      TTTTCATTTGCAGCA 100 57
RTCIAT899_CH03640  749853 ..  749878 +  -3.1  -3.79747   AAAGTCCGCAACAGT         GCGCACACG CACGAGAT CGCGAGCGC          TTTCATGATAGGTCG  54 123
        mmsA  752390 ..  752420 + -23.4  -5.52096   CATTGGCTTCCATCG       GCCGCCGTCCGGAA TTT TTTCGGACGGCGGC       TTTTTTATTGCGTTT 100 51
RTCIAT899_CH03655  752923 ..  752935 +  -4.9  -4.24123   TCTAAATAAGCTGAA                TATGA ATT TCATA                TTTTGGAATTGTTCA  66 90
        rirA  753533 ..  753559 + -17.4  -4.35874   TCGAACATGTTTCAG         TCCGCAGTTACC GCC GGTAGCTGCGGA         TTTTCGCTTGTATTG 100 56
RTCIAT899_CH03665  755475 ..  755513 +   -16  -2.75343   CCGGCTAGGACCGGG   CGATCCGGCGGTCAGACA CTC TGTCTGACCGCCGGAAAA   ATTTGGACATCTGCC  86 61
RTCIAT899_CH03670 NONE
RTCIAT899_CH03675 NONE
RTCIAT899_CH03680  758457 ..  758474 +  -6.2  -3.21276   CGCAAAAAGCAGGAG             GTGCCG CATGAC CGGCGC              TGTTCTCGAAGGGCG  54 15
RTCIAT899_CH03685  759449 ..  759461 +  -2.6  -3.18912   GGCAGATGTCGCTTT                GCCG CCGAT TGGC                TTGCTCCGTCGATCC  43 57
       aroK1  760334 ..  760348 +   -10  -2.62616   TATGGCGCGGCGCCT               TGCCGA TGA TCGGCA               TCATGTCGGGCGTGC  60 244
RTCIAT899_CH03710  763910 ..  763922 +  -3.3  -3.46602   TGCCAGTCGCTCGTG                GCGCA ATT TCCGC                TTATAGTCTGACGGC  49 104
RTCIAT899_CH03715 NONE
RTCIAT899_CH03720 NONE
RTCIAT899_CH03725 NONE
       rrmJ2  768289 ..  768300 +  -2.2  -3.40299   ACGGCTGGAAAAGAC                CGGT GCAG ATCG                 TTGTGACTGTCGTAA  44 519
RTCIAT899_CH03740  770651 ..  770674 +   -11  -4.88228   TGAGAAGAAGCCTGC          GTGCCCGGCA TGTC TGCTGGGTAC           TTTTTGCTATTCCCT 100 53
        guaB  772333 ..  772367 +  -2.3  -3.29461   CAGGTCCTTACTGCA    TAAT-TCCTTAAATCG TGAT CGATTTAAGGACAAAA     TTATGCAGCAGATTA  43 70
RTCIAT899_CH03750  772965 ..  772983 + -11.7  -2.97707   TCGCTACCTCTCGCC             GGACGGC ACGCG GCCGTCC             TGATTGTTCCTATCA  75 4
RTCIAT899_CH03755  773475 ..  773499 +  -2.8  -4.99134   GGTATTGCCGCAAGC         CGCAACCTGCG GTAA CGC-GTTTGTG          TTTTTCCTTTACCGT  76 49
RTCIAT899_CH03760  774469 ..  774491 +  -4.8  -3.60098   GATTTTCTGAGGAGG           TACGTGTCCT AGA ACGACACGGA           TTTAGGGTGGGAGGT  52 14
RTCIAT899_CH03765  775427 ..  775449 +  -4.1  -3.28712   CGCCATCGAGATCGT          CATC-CACCG CAGC CGGCGTGATG           TTGTCGAGGCAGGCC  47 142
RTCIAT899_CH03775  776853 ..  776883 + -17.7  -5.72622   AAGCCCTGCCTCTTT      CCCGGTGTTCGGCC CAAG GGCC-AACACCGGG       TTTTTTCTTTCTGAA 100 78
RTCIAT899_CH03780  777618 ..  777636 +    -3  -2.77899   GAACTGAAGATACTG             CGCGCCTA GTT TAGGAGCA             TCGTTGATACCAACA  41 69
RTCIAT899_CH03785  779344 ..  779389 + -10.5  -3.17075   GCCTCAGGCGTGGCT GGTGCTGG-CGATGCGATCG AGTTCTG CGATCGCATCCTCCGGCAGC TTGAGTTCAGCGGCC  71 47
RTCIAT899_CH03805  783878 ..  783894 +  -2.1  -4.37886   TTTCCTTTACCTGCG              TCAGCAG CGG CAGCGGA              TTTTGTCCGGCATCG  63 221
RTCIAT899_CH03825 NONE
RTCIAT899_CH03830  789402 ..  789440 +  -3.1  -3.30159   GGATCACATGCCGTG  CC-GGCAGGCG-GTATCCC ATG GTGATCTTCGCTTGCCCGG  TTCTGCAGCCGTTCA  47 340
RTCIAT899_CH03845 NONE
RTCIAT899_CH03850  793511 ..  793524 +  -3.8  -4.25104   CCCCGCGGGCGGGGA               GAGG GGACGA CCTC                TTTTACTCGGCAGCA  64 86
RTCIAT899_CH03855  795321 ..  795337 +  -2.2  -4.11692   CAACCTCATAATAAA              CGATGA CCGGC TCCTCG              TTTTCCGGATGGATC  57 361
RTCIAT899_CH03880 NONE
RTCIAT899_CH03885  799813 ..  799832 +  -5.6  -3.78934   CCACTTTGGAAAAGA            TGCGGCGA TAGG TCGACGCG             TTCTTGTCCGAGACG  60 250
RTCIAT899_CH03895  801629 ..  801647 +  -8.8  -2.66316   CCAGCGCGTGCCACA             GCCCTTCG AGC CGAAGGCC             TGATATCATGCAAAG  59 4
RTCIAT899_CH03905  803747 ..  803772 + -13.3  -2.73243   TGAGAGCGTGGAACA         GAGAGACGGCA CGAA TGCCGCCTCTC          ATTTGCCGGATGGAT  79 38
        hisS  806903 ..  806916 +  -3.8  -3.64703   CCCCGCTGGCGGGGA               GAGG GGACAA CCTC                TTTCGGTGCAGCCCA  53 73
RTCIAT899_CH03930 NONE
        hisG  808886 ..  808909 + -17.4  -4.66537   CATTTAACGTAGAAA          GGCTCGCCGG AATT CCGGCGGGCC           TTTTGTCTTGGGAGA 100 50
RTCIAT899_CH03945  810281 ..  810292 +  -5.8  -3.18681   GCGCGGCCTCAGCAT                TCCC AAGC GGGA                 TTGATCAGGTTGAAC  54 10
RTCIAT899_CH03970  814679 ..  814691 +  -3.3  -4.18018   GTCTGAGGAGAGTGG                CAGTC GAT GACCG                TTTTCCATCGCAACG  58 35
        ribF  815697 ..  815709 +  -9.1  -3.53563   GCTGCCGTTCGAATA                CGGCA CCT TGCCG                TTTCGAGGGAACTCT  68 54
RTCIAT899_CH03980 NONE
RTCIAT899_CH03985  817839 ..  817850 +  -5.8  -2.53213   TGTAACGGCCGTCTA                CCCA CTTC TGGG                 TAGGTTCGACGATTC  48 36
RTCIAT899_CH03990 NONE
RTCIAT899_CH03995  819776 ..  819801 + -21.9  -4.09108   ATAGACCCTCAAATT         GGCCGCGGACG GAAA CGTCCGCGGCC          TTTCTGTGCGTTGCC 100 45
        ileS  823012 ..  823023 +  -7.2  -3.07113   ATGGCCAGAATTTTA                CGGC AGTT GCCG                 TTGAATGGGGTCATA  57 98
RTCIAT899_CH04005  823712 ..  823733 + -10.1  -4.28254   ATAAAAGCCCTCAAG           GCGGCGG CATCAAAA CCGCCGC            TTTTCAGTCTTCGGA  86 37
RTCIAT899_CH04015 NONE
RTCIAT899_CH04020 NONE
RTCIAT899_CH04025  827933 ..  827966 +  -4.5  -3.59738   CGGCCTGCAGCCCCT     CGCTGACCTGCAGC ACAAGCC GCTGCTCGTC-GCG     TTTGCGGATATCCTC  54 196
RTCIAT899_CH04035 NONE
RTCIAT899_CH04040 NONE
RTCIAT899_CH04045 NONE
RTCIAT899_CH04050 NONE
RTCIAT899_CH04055  834502 ..  834513 +  -4.4  -4.75404   ATCGGCCTGATCCCG                GCAA TGGC TTGC                 TTTTTCATGCAATTT  74 31
        lpxK  835680 ..  835693 +  -9.5  -4.19238   GCTTCTGGTTGGGTA               GCGCG CCGG CGCGC                TTTTCGGCTTCGAGC  83 75
RTCIAT899_CH04075 NONE
RTCIAT899_CH04080  841449 ..  841472 +   -16  -4.78848   AAAAGGTCAAAGAAA          GCGGCGATCC GTAA GGGTCGCCGC           TTTTGTATTTCGCCA 100 47
RTCIAT899_CH04110  846964 ..  846974 +  -3.2   -3.9442   GTGAGGGGCAGCGAG                 CGGA AGC TTCG                 TATTTTTGCCCTCTT  56 307
RTCIAT899_CH04115  848012 ..  848069 + -22.1  -3.61652   CGTGCGCGGATCAAG CGACCGCCGCCGACACCTTCGCC ATAGCTTCTCCC GGCGAAGGGATCGGCGGCGGTTG TTACTTATTTGGCAC 100 290
RTCIAT899_CH04120  849728 ..  849741 +  -5.9  -4.86731   TCCGATGACCAATCT               CCGCC AAAT GGTGG                TTTTATTTCGGCCGC  83 215
RTCIAT899_CH04125 NONE
         kup  852875 ..  852898 + -12.4  -3.29762   CTGTCATGCTTTTAA          GGTCCGGTGG ATAT CTACCGGGCC           TCTTCAGTTTTTCCT  78 52
RTCIAT899_CH04135  853857 ..  853867 +  -4.6  -3.61371   TAATGGGAGATTATT                 CCGG CTC CTGG                 TTTCGAGTGCCGTTT  52 173
RTCIAT899_CH04140  855142 ..  855169 +  -4.8  -4.20531   AAGCCGCAGGAAAGC        ATGGGCTGAAGA GGAT TCTTCCGCTCAG         TTTTCGGTCAATATG  62 95
RTCIAT899_CH04145  855738 ..  855753 +  -6.8  -3.57144   AGAAATGAGCGGAAG              CGACGC AGCG GCGTTG               TTTCCAGATAAGAAG  60 33
        atpB  856573 ..  856592 +  -4.2  -2.70932   CTAAGGATAAAGACA            TTGGCGTC TAGT GGCGTCAG             TCATTCACCGCACAA  45 37
RTCIAT899_CH04155  856874 ..  856900 + -14.5  -4.05026   CAGCGGCGTCATAGA         TCACGGTTCGC GAGCA GCGAGCCGTGA         TTCTTTGCATTTGCA 100 44
RTCIAT899_CH04160 NONE
RTCIAT899_CH04165  858050 ..  858067 + -10.5  -5.99154   TCGAAACTCGAAAGG             GCCCTGC TTCT GCGGGGC              TTTTTTTGTTTCATG 100 53
RTCIAT899_CH04170  859229 ..  859243 +  -5.6  -3.17901   CGCAAATGGCGCGGC               GCATCG CAT CGAGGC               TTGCCTTGCGGATAT  50 346
RTCIAT899_CH04185  861600 ..  861640 +  -6.1  -3.74454   CGGCGCGATAGGGCC  TAGAGCATTTCCGCTTTTC TTC GGATCGCGAAAACGCTCTA  TCTTCTTGTTTTTAC  60 30
RTCIAT899_CH04190  862227 ..  862259 +  -8.4  -2.62263   CCTATCTCGAGCCGG     CGCCGCGCTTCAGAT GCTC GTC-GAGGCGCGGCA      TGATCTCCACGAAAT  56 71
RTCIAT899_CH04215 NONE
RTCIAT899_CH04220  867850 ..  867861 +  -5.8  -4.14725   GCATCAAATACGATC                CGCA ATAT TGCG                 TTTGTCGTTTCCGTG  67 65
RTCIAT899_CH04225  868763 ..  868773 +  -2.4  -3.28712   AAAAGGCATTGTGGG                 GCCG GTA CGGA                 TTGTAGGCGGGAGCG  43 9
RTCIAT899_CH04230  869370 ..  869386 +  -5.1  -2.71712   TGGAAATGAAATCGA              CGATGTC GAA GAGATCG              CTTTCGACAAGCGGA  47 408
        glyQ  870901 ..  870913 +  -3.3   -3.6501   TCCCTTGGGTTGCAG                TCGCC ACG GGGGA                TTTCAGATGCTTGTT  51 135
RTCIAT899_CH04250  871519 ..  871534 +  -6.8  -3.76224   TAAAGGATGCCGACC              GCTGGCC ATC GGCC-GC              TTTCCTGACTGACCA  62 73
        aroA  872858 ..  872894 +  -6.4   -2.7263   CGCAGGCATGTTCCT   GACGTGAAGCGGCGCCG GCAG CGGCGTCGCGGC-CATC    CTTTGGGGGAGTGAT  50 68
RTCIAT899_CH04260  874836 ..  874856 +    -9  -3.78597   AGGCGGTGGAGGCGG            CGGCGGAT GGTAA ATTCGCCG            TTTGCCTTGGTGACT  73 13
        glyS NONE
RTCIAT899_CH04270  877698 ..  877719 +  -9.3  -4.94487   TAGCCAAATAAAAAG           CCGTCGGAC GCAT GCCCGGCGG            TTTTGTGTTTTCTGC 100 52
RTCIAT899_CH04290  884307 ..  884334 +  -3.4  -3.79906   GACTTAGCGGAACTT        CG-TGCAAGAATG TCA CACTCTGGCAGCG        TTGTTGTCAGAGTGC  54 42
        cfa1  885721 ..  885750 + -26.5  -4.82901   GGCGCCATTTGACGG       GGCCCGGCCGTGG CTTG CCACGGCCGGGCC        TTTTTATGCCCGCAC 100 52
RTCIAT899_CH04305 NONE
       ubiA1  888333 ..  888381 +  -6.8  -3.53031   TCGCTCCCTGAGGAC GAAAC--GACATCGGCCGCGAGG TTGTTT CC-CGCGGCCGATGTCAAGGGTC TTAGTTTCAGGTCGG  60 30
RTCIAT899_CH04320  891918 ..  891930 +  -2.6  -3.53012   ACATATTTTCCGGGT                GCGG AATGG CTGC                TTTCCACAAGCGCAG  47 139
RTCIAT899_CH04325  895053 ..  895072 +  -7.8  -3.21099   GTCGCTTTCGCGACA            TCTCCCCC CCAT GGAGGAGA             TTGGTAATCCGCAGC  59 97
RTCIAT899_CH04350 NONE
RTCIAT899_CH04355  902215 ..  902271 +  -7.1  -3.53012   GGAAACGAGCATCTG CCGCGGCCCGCTGCACATCTGTGCGA GCGCGA TCGT-CAGGTCCGGCGCGGGCAGCGG TTTCGCCGGCAGGAG  58 240
RTCIAT899_CH04365  903962 ..  903986 + -12.8   -4.7078   GAATTGCCAATGCCA          GCCGTCCGGT TTCCC GCCGGGCGGC          TTTTTGCATGGTTCG 100 151
RTCIAT899_CH04375 NONE
RTCIAT899_CH04380  907932 ..  907953 +  -6.6  -4.06419   CGCGCGGCTTTCGAG           GCCTTCAT GAAGCG GTGAAGGC            TTATTTCTCCAGCGC  68 8
RTCIAT899_CH04395  911219 ..  911239 +  -6.8  -2.72661   ATTCTTCGAGCATGG            CCGCGC CTCTTCCTC GCGCGG            TCCTTAAACATGCTC  52 184
RTCIAT899_CH04400  913300 ..  913326 + -14.4  -4.61482   ATAGACCTATCGTCG         GCGGCCCGTC CTTTTGC GGCGGGCCGC         TTCTTTTTTCACAGC 100 96
RTCIAT899_CH04410  914854 ..  914866 +  -9.1  -3.06501   TGGCGTTCATGGCCT                CAGGC TTG GCCTG                TTCCATCCAGATATC  60 281
RTCIAT899_CH04435  919584 ..  919599 +  -3.2  -3.05384   TGAGCCGAACTCTAG              TTCCGC TGCG GCAGAA               TTGGATAGCCGGCCA  43 38
RTCIAT899_CH04455  922734 ..  922747 +  -5.2  -3.08211   GTTTCTCGAAGGCTG               GCGG GGATGA CCGC                TACTTTTCGAGAGAT  50 16
RTCIAT899_CH04460  923854 ..  923876 +    -4  -2.94365   TCGCGTGTTCAGCCT           CACATGGCCG GAT CGATCATGAG           CTTTGTCACCTCTCC  44 4
RTCIAT899_CH04465  924869 ..  924893 +  -2.8   -4.8048   ACGCAGATAGACGAT         GAT-GCCGCGG CCCT CTTCGGCGATC          TTTTTCATGTAGAAA  72 396
RTCIAT899_CH04480  927450 ..  927461 +  -4.4   -4.1585   TGAAATCCAGAGCTT                TCGA TTGA TCGA                 TTTTAAGCGTTCTCC  62 75
        pdxH  933410 ..  933422 +  -3.3  -4.00038   CCGCGGCAGCAGCAG                CGGTG CAT TGCCG                TTTGTCGTCGTGATC  59 140
RTCIAT899_CH04520  935916 ..  935947 + -21.6  -3.33922   TTGAATTGGATAAAC      GCGAGCCGGCGGAG CGAT CTCCGCCGGCTCGA       CTTTTTGGCGGGAAT 100 49
RTCIAT899_CH04525  936720 ..  936739 + -12.8  -3.15544   GGGCATAGCCCTGGC            GGCGGCCG TTGC CGGTCGCC             TTCATGCCCATCAGC  74 439
        coxB NONE
        coxA  941393 ..  941406 +  -3.8  -2.70932   CCGTGATAAGCGGCG               TCCG GTTCAA CGGA                TAATTGGAAGAAAGA  43 55
        cyoE  942364 ..  942376 +  -6.9  -2.79302   CTGGTGTCGGGTGGT                GCCGG AGG CTGGC                TATGATCGAGCTCGT  52 8
RTCIAT899_CH04555 NONE
RTCIAT899_CH04560 NONE
RTCIAT899_CH04565  944152 ..  944194 + -17.9   -4.3467   AAATGTGGAATGCTT TCTGTCGCAAAACTCTCAC TTTGC GGGCGAGTTTTGCGACAGA TTTTCCTCTGAGAAT 100 96
RTCIAT899_CH04585 NONE
RTCIAT899_CH04590  947565 ..  947575 +    -4  -3.05844   AATAGAATAGCTTCA                 TTTC GAT GAAA                 TATTCGGCTAGAGCA  45 49
        ispH NONE
        thrB NONE
        rnhA  950161 ..  950182 +  -2.2  -3.04398   AGAACCTTCTATCGT           CCGCTCGCG CGATA CGC-AGCCG           CTTTTAGGCCCGCAA  42 39
RTCIAT899_CH04610  950938 ..  950951 +  -2.4  -2.56426   ATCGCGACTGGGCCA               GCTT TCTGAC AAGC                ATATTGTCGATGTTC  38 234
RTCIAT899_CH04630  954186 ..  954224 +  -3.6  -3.19192   CAGCCAAAGCCCATT   TGTCAGCGTGAGCTGTGC TCC GCGCTGAACGCGTTGCCA   TTCGCTTGGCTGCCG  47 15
RTCIAT899_CH04635  954633 ..  954667 +  -9.2  -2.71731   TTCAACGTTTAAGCG     GTGTGGTCGCAGGC AGTGTAC GCCTGCGACCTCGA     TCGTTGAGCGATCAG  60 29
RTCIAT899_CH04655 NONE
RTCIAT899_CH04660  958569 ..  958597 +  -3.8   -3.7511   CATTCGACGGTCTGC       TGAAGCTTGCGGGC CTG GCCCGC-AGCA-CG       TTCTATTATCAGCAG  53 53
RTCIAT899_CH04665  959759 ..  959799 +  -6.7  -4.07568   CATTGATGGAAACGA  CGGCGATGTCATCGATGCC CTT GGCAAGAATGGCGTCGCGG  TTTTCGAGAAAGCCC  68 410
RTCIAT899_CH04680 NONE
RTCIAT899_CH04685  961947 ..  961981 +  -7.8  -3.01712   TTTTCAAATCCATGG     TCGCCGCTCCATCG GAATTGA TGTTGTAGCGGCGA     TGTTGGGAGGAAGGG  57 51
RTCIAT899_CH04690  963529 ..  963549 +  -5.3  -4.07885   TCAGCTCCAGCTTGA            TCCGGTGCG GAT CGCAATGGG            TTTTGGCGAGCAGTG  65 443
RTCIAT899_CH04715  970424 ..  970439 +  -4.7   -3.1577   CGACGGCACCATAGC              GGCAA CATCTA TTGCC               TATTGCCTATTGCCT  47 106
RTCIAT899_CH04725  972133 ..  972144 +  -5.8  -4.42788   TCCCTGCGAGCTGTG                CTCC GTTA GGAG                 TTTTGTCGCCTTGCC  73 78
       bioY2 NONE
RTCIAT899_CH04735  973466 ..  973482 +  -4.3  -2.63079   ATCGAACGGCTGTTT              TCGGTGC GCC GCGCCCA              TCCCTTGTCTAAGAA  43 134
RTCIAT899_CH04745 NONE
RTCIAT899_CH04750  974913 ..  974925 +  -4.1  -3.06183   GACGCCGCTTTAGTC                TTTGG TAA CCAAG                TTAGGTAACCATAAC  45 113
RTCIAT899_CH04755  976230 ..  976270 + -15.5  -4.66833   GAAGAAGACGAAACA  CCCAGGGCCTTATCGGATA TAT TGTACGGTAAGGCCCTGGA  TTTTTCAGCTTCGGA 100 142
RTCIAT899_CH04775  979012 ..  979026 +  -4.3  -3.86015   CTAATGACACTGTCA               TACTC GGGCG GAGTA               TTTGTAAGGAAACTG  58 57
RTCIAT899_CH04780  979715 ..  979727 +  -9.1  -3.50393   ACCGTGCCTTGTTAG                CGGCA AGC TGCCG                TTATATCGCATGAAA  68 420
RTCIAT899_CH04785  980486 ..  980513 + -18.4  -5.34555   CGCCTTTTTACATCA        CAGGCGGGCGGC TGGG GCCGCACGCCTG         TTTTTTATGATCTCC 100 45
         smc  984177 ..  984203 +  -3.6  -4.33653   AAATTGCTGCATCGG         CTGCCGCGCATT ATG AAAGCGTGCTAG         TTTCGTTTTTCGATC  64 88
RTCIAT899_CH04795  985598 ..  985656 + -32.9  -4.32177   TCAAGTCGCTCTGGA TG-GACCCGGAGGCTCCCGATTTCGATC AATC GATTGAAATCGGGAGCCTCCGGGTCATA TTTATTGTGCGGTGC 100 44
        ppdK  988418 ..  988429 +  -4.4  -3.15699   GGGCGGGCTTGATTT                TCCA AATC TGGA                 TGTTCGTGGATCAGT  47 29
RTCIAT899_CH04815  990503 ..  990523 +  -3.9  -4.35461   GTCGAATGAGGGGGG            TTGCCGCTT TGG ATGCGGGAA            TTTTCGTGCTCTTGA  64 125
RTCIAT899_CH04850 NONE
RTCIAT899_CH04855  995170 ..  995184 +  -2.8  -3.16881   TCACGCCGTCGTGAT               CGATAT GGC AAATCG               TTCATGCGATGCCTA  45 60
        msrB NONE
       msrA1 NONE
RTCIAT899_CH04870  996736 ..  996762 +  -7.3  -2.74248   TGAGAGACGGTGTTA        GCGCGTCTGGCGC CGT GC-CCGGACG-GC        CTTTGCCAGGTCTTC  55 58
RTCIAT899_CH04900 1003015 .. 1003028 +  -2.3  -2.73007   CTCGGGAGGCAGTTG               TCGCG GGAG CTCGA                GTTTGCGACGGTGTT  39 104
       hisC1 1004221 .. 1004244 +   -16  -3.54951   CTTACAAATGAAAAA          GGCGGCGGAGC CGA GC-CCGCCGCC          TTCTGTCATCACATA 100 86
RTCIAT899_CH04925 1008582 .. 1008602 +  -8.1  -3.69605   CTTCGACAATCAGTG            GGCGGGGTG TTC CTCGCCGCC            TTCCTTTTCCATGGC  68 89
RTCIAT899_CH04935 NONE
RTCIAT899_CH04940 1010793 .. 1010803 +  -4.6  -4.10161   GCTTGCCGAGAATAT                 GGTC GGC GGCC                 TTTTCGCCGGTCATG  61 118
RTCIAT899_CH04960 1015545 .. 1015557 +  -3.3  -3.74077   GGGAGGAATATCATG                CCGAT GGT AACGG                TTTCCATCTCTCCGC  51 256
RTCIAT899_CH04965 1015830 .. 1015860 +  -5.2  -3.44334   GCAGCCTGTCGGCTG       CCGTATGCCGGGTC TGC GCCCCGACGAATGG       TTAATATTGCTTTAC  53 56
RTCIAT899_CH04970 NONE
RTCIAT899_CH04975 NONE
RTCIAT899_CH04985 NONE
RTCIAT899_CH04990 1022545 .. 1022579 +  -6.3  -3.05596   CGAGCGCGAGCACAA     GGCCGCCCATGCATT CGATC AGGGCATGCGCGCCC     TTCAATAGGACGCTG  49 442
RTCIAT899_CH05005 NONE
RTCIAT899_CH05010 1024915 .. 1024939 +  -3.5  -3.63515   CTTGCGATCGATCGG          CAGCGAAAGCA CGA TGGTCTCGTTG          TTCTTCACCGTCACG  51 216
RTCIAT899_CH05025 1026593 .. 1026621 + -12.3   -4.2679   GCGAGCGGCAGGCAA        CGGCGATCCCGGC CTT GCCGGCCTCGCTG        TTTTCCTGGGCATTG  95 274
RTCIAT899_CH05035 NONE
RTCIAT899_CH05040 NONE
RTCIAT899_CH05045 NONE
RTCIAT899_CH05050 NONE
RTCIAT899_CH05055 NONE
RTCIAT899_CH05060 NONE
RTCIAT899_CH05065 1038225 .. 1038235 +  -3.2  -3.75024   CGTTCGTTGCGCCAT                 CGAC AAG GTTG                 TTGTTGATCGTGGCG  54 521
RTCIAT899_CH05075 NONE
RTCIAT899_CH05080 1042047 .. 1042057 +  -2.4  -3.14132   GGTTGTCGATGAATA                 GCGC AGG GCGA                 TTCCTCACCACAAAG  42 25
RTCIAT899_CH05085 1043138 .. 1043176 + -13.9  -4.08767   CAGTTCCCTATAAGA  GCGGCGCG-GGAGATAGCC GGA GGCC-TCTCCGCGCGTCGC  TTTTCAAGCCATCAG 100 43
RTCIAT899_CH05100 1047928 .. 1047954 +  -3.6  -4.22524   CGTGATGTTGCATAA         GTGCGATAGTCG GGA TGATTAGCGCTC         TTTAGTTTTGCCTCT  64 62
RTCIAT899_CH05105 1048798 .. 1048826 + -16.1  -3.62096   GATACCGCATCATTG        AAAAAAGGGCGCC ACT GGCGCCCTTTTTG        TTTGCCGTCCTGACC 100 39
RTCIAT899_CH05110 1049541 .. 1049564 +  -8.1  -5.45802   GAACATATTGAAAAA          GAGCGACAG TTTGAT CTGCCGCTC           TTTTTCTTTTGCAAG 100 81
RTCIAT899_CH05115 NONE
RTCIAT899_CH05120 1050905 .. 1050918 +  -5.9  -3.53224   TGCTCACCCATCCCC               GCCGT TCCA GCGGC                TTTAAGGCCGCCGTC  55 200
RTCIAT899_CH05130 1051975 .. 1052016 +  -6.6    -4.431   GGCGACGGATGAGGC CGCAG-AATTCGCCCCTTG GGGAA CAGGGGTCGAACTATTGCG TTTTGTGCCTAGGTA  75 41
RTCIAT899_CH05135 1053089 .. 1053109 +  -8.2  -3.02639   GAAGCTTCGCTCCGA            CCCTCCCC CTCAA GGAGAGGG            TAATTATTTACCGCT  60 158
RTCIAT899_CH05145 1055380 .. 1055401 + -14.4  -5.29445   TGCCTTGAAAAGAAA           GCCGCCGG CCAAAT CCGGCGGC            TTTTTGTTGTTCAGA 100 50
RTCIAT899_CH05165 1060551 .. 1060564 +  -5.2  -3.02511   ACCGGTCAGATAGGG               GCCG ACGAGC CGGC                TGTTCAGCCAATCCA  46 327
RTCIAT899_CH05175 1061941 .. 1061959 +  -6.7  -3.30124   CCCGAGGATGCTGCC            CGTCGCCG CATC CGGC-ACG             TTATGCCGGATCACA  56 272
RTCIAT899_CH05195 1065163 .. 1065191 +  -3.8  -4.07568   CCGCGGCAAGTGCGG       CCGCC-G-GACCGG TCA CAGGTTGCGGGCGG       TTTTCCGGAAGAAGA  59 71
        sodM 1066672 .. 1066698 + -13.7  -4.84311   ACAGGCTGGCTTTCG         CACCCGGCGTC TTCCT GGCGTCGGGTG         TTTTCTTGTCTGCCA 100 50
RTCIAT899_CH05210 1067694 .. 1067716 + -13.4  -3.85698   GATTGATGTTGCCAA           CGCCTCAGCC GGC GGCTGGGGTG           TTTGTCCGCCAGCCA  93 105
RTCIAT899_CH05220 1069266 .. 1069281 +  -8.2  -3.27298   CGGCAAACATGCGCT              GGCCGC CTGG GCGGTC               TTGATCATTCGGAGA  62 131
RTCIAT899_CH05225 1069846 .. 1069872 + -16.6  -2.80977   AAAATCGATTTTAGC         GTCCGCACTGGT TCT ACCGGTGCGGGC         CTCTTTGGTTTTAGA  90 117
RTCIAT899_CH05230 1071131 .. 1071154 +  -2.2  -4.82901   GGCGAGTTGCGGTGC          ATGGCGGGCG TAGA CCCCCGCGAA           TTTTTCTGACAGCGG  72 335
RTCIAT899_CH05240 1072402 .. 1072413 +  -4.4  -3.01712   CTAAAAATCAATATC                GGAT GGCG ATCC                 TCTTAAAGGCCGGCA  47 97
RTCIAT899_CH05255 NONE
RTCIAT899_CH05260 NONE
RTCIAT899_CH05265 1076285 .. 1076306 +  -5.9  -3.44051   CTGCTTGATCTCATC           GGCAATC TGGTCGTT GATTGCC            TTCTGCTCGTCGGCC  55 202
RTCIAT899_CH05290 1081725 .. 1081775 +  -6.8  -2.74322   GGAGACGAGATTATG GGCGACAGGTCTGTCCGACC AGCTTATCCGA GGTCTCACGGGCCTATCGCC GTTTCAGCGCTTCCA  52 58
RTCIAT899_CH05305 1084137 .. 1084155 +  -5.2    -3.445   AAGACAATGCTCTAA             CCCGGC AATTGCG GCTGGG             CTTTTTCCTCGATGA  53 104
RTCIAT899_CH05320 1087497 .. 1087516 +  -4.2   -3.6502   TCCAGCCCTGGTCCC            TGGCGAGCG CCA CGCGC-CCA            TTTGCCTCCGAAATG  54 260
       phaA2 NONE
        phaB NONE
       phaC2 1091368 .. 1091386 +    -3  -2.73441   TGCCGCGCCGATACC             GATGGGAC ATT GGCTCGTC             ATTTCGCCGATCGTC  41 92
       phaD2 NONE
       phaE2 NONE
       phaF2 NONE
       phaG2 1094495 .. 1094510 +  -6.2  -3.53012   GCGCTGGGAGATAGC              GAAATC AACA GATTTC               TTTAGCCAGGCGCAA  57 449
RTCIAT899_CH05365 1095062 .. 1095079 +  -6.9  -3.30619   ACAGACTGAAGATAA             TCCGGCT TTCG GGCCGGG              TTATCCGCAATGATT  56 51
RTCIAT899_CH05380 NONE
RTCIAT899_CH05385 1099122 .. 1099132 +  -6.8  -2.82635   TGCAGGATATCGGCG                 CGCT TTG AGCG                 TATCGTCCTAACGCT  52 18
RTCIAT899_CH05390 1099699 .. 1099733 +  -5.7  -4.16842   CAGGTAGGTGTAGCT    GTC-GGCGCGGCGCC AGGCCTC GACGC-GCGCCTGAC    TTTCTTCCGCATCGA  68 141
RTCIAT899_CH05405 1101957 .. 1101979 + -11.3  -3.32844   ACTTCAAGCGAGCAA          GTGCGCAGCG CATT CGC-GCGCAC           TTGTCGCCTGCGGCC  75 43
RTCIAT899_CH05425 1106376 .. 1106391 +  -4.6  -3.43944   GCTGTATTCCGCCAG              GCCTGG CGCA CCAGCC               TTCTGACTTCCTCGT  52 49
RTCIAT899_CH05435 1107133 .. 1107148 +  -3.2  -3.53091   ACCTTTCTGAACGTC              TGGCTC CGCA GAACCA               TTTCCCGCCAGCCCT  49 31
RTCIAT899_CH05440 NONE
RTCIAT899_CH05445 NONE
RTCIAT899_CH05450 1110180 .. 1110199 +  -4.2   -4.7871   TGATGATGCCGCAGC            GCAGTACC TATT GGTTTTGC             TTTTTGATACTGGTT  74 75
RTCIAT899_CH05455 1110724 .. 1110745 +  -3.6  -3.02381   CGCGGTTGGAATAAG           CGCCCCGT TAAAGT ATTGGGCG            TCTATGCTGTTCTGG  45 96
RTCIAT899_CH05460 NONE
RTCIAT899_CH05465 NONE
RTCIAT899_CH05470 NONE
RTCIAT899_CH05475 1114824 .. 1114835 +  -2.2  -2.68493   ATATCCTCGGCAAGT                GATG CGGC CGTC                 GTCTTTCGTCATAAC  38 24
RTCIAT899_CH05480 1116572 .. 1116609 + -24.3  -4.09685   CGGATGAAATGCATT   GGGAAAGCCGCGCAGGC CACG GCTTGTGCGGCTTTCCC    TTTTAGAACATGCCA 100 50
RTCIAT899_CH05485 1117398 .. 1117425 +  -4.8  -3.05844   CGGATACATGATCAA        GGACGAGGGA-TG AGT CGCTTCCGCGTCC        TCTTCAAGTCCACCG  47 13
RTCIAT899_CH05490 1118828 .. 1118845 +  -2.6  -3.11208   GAAACAATAGGTTAA             TCCTGC GCTAGA GCCGGA              TGATTTTAGGTCGAA  42 31
RTCIAT899_CH05495 1122239 .. 1122258 +  -6.4  -3.14132   TCACCGCGTTGGAAA            GCAGGTTG AGCA CGATCTGC             TTCATCGCCCGACGG  54 328
RTCIAT899_CH05510 1128487 .. 1128512 +  -2.5  -3.46534   GCGGGATGCTGGCTG         CCGCACTTCGTG CGT CA-GGGGTGCCG         TCTTTGCTGACGTTG  47 55
RTCIAT899_CH05550 NONE
RTCIAT899_CH05555 1139588 .. 1139602 +  -2.8  -3.21099   GAACCGCTCCATATC               TCCG CAAGAGA CGGA               TTAATGCTGGGCAGA  45 95
RTCIAT899_CH05565 1141160 .. 1141177 + -12.7  -4.18494   AGTGAAAACATAAAA             GGGGCCA TCGC TGGCCCC              TTTTCGATGAGAATC  95 50
RTCIAT899_CH05580 1144533 .. 1144571 +  -5.1  -3.01791   TAAAGCCCCAGGAAA   TCACCAGTCCGCCCAGC CAGGC GCCGAGCGCATTGGCGA   TGTTGAAGGCGGAGT  46 106
RTCIAT899_CH05590 1146941 .. 1146971 +  -3.1  -3.55487   GCGATAGTCAAAATC       GGACACGGTGCGC AGATA GCGGATCGCTTCC       TTGTGCTTCGTGTCG  49 67
        bioA 1150199 .. 1150219 +  -8.1  -3.13343   CCTCGCGCAGTTCGC            GCACGGCCG CTT CGACCGGGC            TTACATCATTCGCAT  57 322
RTCIAT899_CH05615 1152725 .. 1152753 +    -3  -3.76492   CAGGAATGCCTGCTC        CGGCGCCTGC TGGCATAGC GAAAGCGCCG        TTTGATAGGATTGCC  52 98
RTCIAT899_CH05660 1158967 .. 1159013 +  -8.1  -4.19953   AGATGCCAGCCGAAA TGATGAAAACCGCGACCGGCC GGAACAA GGCAGG-CGCGG-TTTCGTCG TTTTGGGCTTAACTG  77 101
RTCIAT899_CH05670 1160938 .. 1160975 +  -6.8  -3.13299   TCGCAAAAGGCCGAA   CGCAGCCGCCGGACGC ACTCCC GGGATCGATGGCTGCG    TGTTCCCTCTAATGC  54 51
RTCIAT899_CH05680 1162941 .. 1162951 +  -4.6  -2.52464   GACATGGACGCGATT                 GTCG ATG CGGC                 TGACTTCGGCGCAGG  42 168
RTCIAT899_CH05690 1163943 .. 1163953 +  -3.2  -3.95022   CGGCATACCGCATCT                 GGTT CTC GACC                 TTTAATCTTCATCCC  56 10
RTCIAT899_CH05695 1165401 .. 1165422 + -11.5   -4.1721   CGTAAGAATGGAAAA           GGCCGCGCT TTCG AGCACGGCC            TTTTCAACTATGAAT  88 36
RTCIAT899_CH05725 NONE
RTCIAT899_CH05730 1174959 .. 1174972 +  -5.2  -3.08133   AAAGAACGTACACAA               GCGC GAAAAA GCGC                TTGCGTCGATAAATG  50 103
RTCIAT899_CH05745 1176922 .. 1176946 +  -3.3  -3.30443   CGTCGTTCGCCCGAC          GCGGGCGGCGC ATT GATCCGCTCCC          TTGCTCTCATCCTGG  45 10
RTCIAT899_CH05750 1177457 .. 1177473 +  -5.1  -3.79623   CAAAAATCGGCCGGC              TAGCCAT GGA ATGGCCA              TTTCCTCGCCTTTTT  61 228
RTCIAT899_CH05755 1178893 .. 1178912 + -12.8  -4.75174   CCCCGGTGAGGAAAA            GCCCGGTC TAAA GGCCGGGC             TTTTTGCGTTGCCTG 100 74
RTCIAT899_CH05760 1180434 .. 1180460 + -18.1  -4.00042   TCCGATCGGAAGAGG         GAAGGCCCGGT TTCCC ACCGGGCCTTC         TTGTTTCATGAGGAC 100 83
RTCIAT899_CH05775 1184649 .. 1184684 +   -14  -3.91716   CCATTACCAAACTCT    GCCGGACCGCTCTCTT CACA AGGAGGGCGGTCTCGC     TTATTTAGGGACTAG 100 53
        smpB 1185447 .. 1185470 +  -3.1  -3.86897   CCTAGCGAAGGGCCG          GC-TGTCGCG GCAAA CGCGAAACGC          TTTCTGCCGCGTGCA  54 239
RTCIAT899_CH05790 1186854 .. 1186879 + -14.7  -5.26119   ATGATGGCAAGATGC         GTGCGCCGGTC AGAT GACTGGCGCGC          TTTTGTTTTTGCGGG 100 73
RTCIAT899_CH05795 1189220 .. 1189239 +  -9.4   -3.5393   CGGATAGATATGCAT            TATACGCA TGGC TGCGTATA             TTTCAAAGCGGTGGT  68 107
RTCIAT899_CH05800 1189526 .. 1189541 +  -6.1  -3.14211   TGCGCCCTTGGAGCA              TCCCG ATCTCG CGGGA               TTGCTGCCCGCCGCT  52 83
RTCIAT899_CH05805 NONE
        acpS 1190727 .. 1190739 +  -4.8  -3.04398   TGGATGCCTGAATCA                CGAC TGAAT GTCG                CTTTTGGCACCCGCA  47 30
        lepB NONE
         rnc NONE
         era 1193274 .. 1193288 +  -5.7  -3.37245   CATTGACGAGAGTTT               GCGTT CCTGC AACGC               TTAATATTACAGTGG  56 35
RTCIAT899_CH05830 1194084 .. 1194095 +  -7.2   -2.5547   GGACGGTTTTGATTC                GGGC AAGC GCCC                 CTTCATCTAGGCACT  54 4
RTCIAT899_CH05835 NONE
        recO 1196044 .. 1196054 +  -8.2  -3.32844   ACTGGACATTCGGCA                 GGCC GAA GGCC                 TTGTGCGATACCCGC  59 436
RTCIAT899_CH05870 1204801 .. 1204842 + -13.7  -4.35116   CGTACTTTCATCCAA TGAGAGGGCGGCCTGCCGG CACA CTGGCAAGCTGCCTTATCA  TTTTGATGTAGGATC 100 43
        sodC 1205423 .. 1205434 +  -3.6  -3.67597   GTGCCGGCAAGCGTC                TGGC ATGT GCCG                 TTATTCAATAGGAGG  53 3
RTCIAT899_CH05915 NONE
RTCIAT899_CH05920 1211314 .. 1211327 +  -6.7  -4.74103   TTTCACTCCTCACCA               TGCTC CCCG GAGCA                TTTTTCGATTCACAG  81 258
RTCIAT899_CH05955 1219535 .. 1219549 +  -4.2  -4.09739   CGATGTATTGCATAA               TGCCGA TGG TCGACA               TTTTGAGAAGCTTCG  61 209
RTCIAT899_CH06020 1232038 .. 1232064 + -10.2  -3.07522   CGCCCGCTAAATATT         CTGAGGAGTAGC CCG GCTATTCTTCGG         TCTGTTCCGAGATAT  69 31
RTCIAT899_CH06040 NONE
RTCIAT899_CH06045 1236046 .. 1236059 +  -3.7  -3.53091   GAGAAAGCGCGGACA               GGCAG ATAC CAGCC                TTTCCCACACGCGAT  51 227
RTCIAT899_CH06050 1237109 .. 1237148 +  -5.6  -3.01712   CAGCGCCGGCTGCCG  TCGGCTACCTCTCCGTCA TTGT TGAAGTGGAGGTTGCCAA   TGTTGCAGCAAAGCC  50 156
RTCIAT899_CH06055 NONE
RTCIAT899_CH06060 1238501 .. 1238518 +  -5.5  -3.53012   GGTCGGAAAGCTGAG             GCCGC TTGTCGTC GCGGC              TTTCGACCGCACGCG  55 375
RTCIAT899_CH06070 NONE
RTCIAT899_CH06075 NONE
RTCIAT899_CH06080 1243279 .. 1243299 + -11.1  -4.56702   GCCAATAACAAAAAA            GCCTGGGTC GAG GAGCCAGGC            TTTCTTTCATTCACA  95 64
RTCIAT899_CH06105 1246934 .. 1246945 +  -2.2   -4.1196   GTAATAGGTCGTTTG                CCGT AGAT ATGG                 TTTTCCCGCTGCCTT  56 37
RTCIAT899_CH06110 1248264 .. 1248295 +  -5.8  -4.21194   TTCCATCATGACGGC      CGAATAAACGGACA AACT TGCCCGCTTATCCG       TTTTGAATCCTACCG  67 19
        fabD NONE
        fabG 1251273 .. 1251304 + -10.9  -3.01712   ATGATCTAAAGGAAT      TGCTGTTGGAGGG TGCTTT CCCGCCAATAGCA       TGTTGAGCAACCCGG  69 32
        acpP 1251809 .. 1251830 + -13.7  -3.44848   TCGCGCTTTTTGACA           GGGCGGGCT GAAG AGTCCGCCC            TATTTCGTCCGGCGA  88 45
        fabF 1253183 .. 1253218 +  -7.4  -3.90559   AACAACGCGTAACTA    TGAGAGCGGGGATGTC TTTC GGCAACCTCGCCCGCA     TTCTTGATTGTTGCT  68 42
RTCIAT899_CH06140 1254599 .. 1254634 +  -8.2  -3.30781   AACCAACTGATCCTC    GCTGTGCCGCGGCTTGC ATA GGAAG-CGCGGCGCGGA    TTCACTTTACATTGA  62 31
RTCIAT899_CH06145 NONE
         gmk 1256399 .. 1256412 +  -9.5  -2.92653   GCATCTTGCGGCGCT               GGCCG AACG CGGCC                TGTGTCACCTTCTCC  59 169
RTCIAT899_CH06190 1266549 .. 1266595 +  -9.4  -3.23274   CAGCCCGATTTTGTA AGATAGCGCCTTTCCGCTTTTC TTC GAATCGCGAAAATGCGCTATCC TTCCCTTGTGACGCA  65 42
RTCIAT899_CH06195 1267450 .. 1267507 +  -4.2   -4.0616   CATCGGCTCGACACA GGC-AAGCCCATCCTCGA-AACGCCG CACGCCGA CGGCAATATCGATGATCGGCTTGGCC TTTATCGTTGGGATC  61 360
RTCIAT899_CH06210 NONE
RTCIAT899_CH06215 1271270 .. 1271295 + -11.9  -3.32022   AATTAAAAGCAAGAA         TACCTCCTCCC TTTG GGGAGAAGGTA          TTCATCTGTGCCAAA  80 35
RTCIAT899_CH06255 1280068 .. 1280088 +  -9.7  -5.14563   AAATGACTCATGGAA            GCCGGGA CCTCGCA TCCCGGC            TTTTTTCATGCCAGC 100 74
RTCIAT899_CH06270 1282798 .. 1282820 +  -4.7  -3.71645   AGCGCCGATATCGCG           TCGCCCGTC GGTTA GTCGGTCGA           TTTCCGTCTGGAGTT  57 419
RTCIAT899_CH06300 1287885 .. 1287904 + -12.8  -5.68438   TGGAATGAAGAAAAA            GCCGGGGT TTGC GCCCCGGC             TTTTTTGTTTGCTCG 100 54
RTCIAT899_CH06315 NONE
RTCIAT899_CH06320 1292248 .. 1292264 +    -3  -3.19653   AGGCGGCTGCGTGGG             TGG-GAG CTTG CTCTCCA              TTCATCACATTGTCA  45 39
       phnM2 1293620 .. 1293641 +  -6.5  -3.63922   CAAGCAGCGACAAAA           TCTGCCGTC CATC GACAGCAGG            TGTTTTGCCGAGGCT  60 110
RTCIAT899_CH06340 NONE
RTCIAT899_CH06345 NONE
         ppk NONE
RTCIAT899_CH06355 1301327 .. 1301353 +  -7.3  -4.78572   CGTCCGCCCTTTGGG        C-ACCTTCTCCC CGAG GGGAGAAGGGAG         TTTTCTTACTTCGCG  86 142
        aspS 1309966 .. 1309988 +   -12  -5.27335   AATCAAAATGCAAAA           CCCGGCGA CCGAAAA TCGCCGGG           TTTTTGTTTGGGACG 100 54
RTCIAT899_CH06395 1311925 .. 1311946 +   -13  -4.23892   TGAGGCAAAGGAAAA           CCCGGCGA CCGAGA TCGCCGGG            TTTTGGATGGTTCAA 100 38
        parC 1315911 .. 1315921 +  -2.4  -4.43909   AAATGTGAACGCTGC                 CAGG TAA CCAG                 TTCTTTTGTTCCCGT  66 286
RTCIAT899_CH06440 NONE
RTCIAT899_CH06445 1321112 .. 1321151 + -12.8  -3.92373   CGAGACTGACACAAA  CGGGTGTAGCGAGGCG AGAGAAGA CGCCACGTTGCGCCCG   TTTGTGCATGAACTG  93 79
RTCIAT899_CH06450 1322636 .. 1322671 +  -3.2  -4.77438   TTCCGACCTGAAGGT    CTTGGCTTCGCGATAT TGTG ATAGTTCGTGGCCAAG     TTTTTGGTGGTGCAT  70 513
RTCIAT899_CH06455 1324141 .. 1324159 + -12.4   -5.4505   CAATCCGTTTAAAAA             GCCGCGTC CTC GATGCGGC             TTTTTTGTTAGGAAG 100 57
        glyA 1325585 .. 1325604 +  -3.4  -3.15544   GGCTATATGGGCTAA            GGAGAGCG CATG CGCTGCCC             TTACTGCGGCTCAGA  43 26
        nrdR NONE
        ribD NONE
        ribE 1327826 .. 1327841 +  -8.2  -3.55444   AGCTCGCCGCAAGAA              GGCGTC GATC GGCGCC               TTTCCGGCCTACGCA  65 49
        ribH NONE
        nusB NONE
RTCIAT899_CH06505 1332969 .. 1332993 + -13.5  -4.72272   GAATGCAAAAGAAAA          CCCGCGAGACG CCA TGCCTCGCGGG          TTTTTCGTAGAAACG 100 48
RTCIAT899_CH06515 NONE
RTCIAT899_CH06520 1334959 .. 1334983 +  -2.7  -3.63744   CGTTCGAGCACAATT          CAGTTGTCACC GGG GGAGAAAACGG          TATTTTGACGCCAAA  51 51
        plsX NONE
        fabH 1337060 .. 1337080 + -11.1  -2.87463   CCTGGGGCGCGGTCC            TGCTGCGCT GGT AGCGCCGCA            TCTCTAAAAGCCGTT  71 12
RTCIAT899_CH06535 1337583 .. 1337594 +  -5.8  -3.86822   GTCGTTTTAGGGCGA                TCCG TTTG CGGA                 TTTGTCGCAAGCTTG  63 89
RTCIAT899_CH06540 1338522 .. 1338542 + -13.3  -2.78032   CGGGTCCAGTTTGAC            GGCGAAGCT TAT GGCTTCGCC            CTGTTTTGAGGCAAC  79 253
RTCIAT899_CH06545 1339790 .. 1339811 + -13.7  -4.74012   TGCTAATCGGATATG           GGCCTCGTC ATCC GGCGAGGCC            TTTTCATTTTGTGCT 100 77
RTCIAT899_CH06550 1340342 .. 1340365 + -14.6  -4.13945   CCGCGCCATGCCATG          CTCCGTCGGC TCGC GCTGACGGAG           TTTTCACGTCCGGGT 100 54
RTCIAT899_CH06560 1341223 .. 1341240 +  -3.4  -4.82901   TGGGCCGAGGCGGCT             G-TGCCG CTGAA CGGCAAC             TTTTTCTGAGCAGGC  70 16
RTCIAT899_CH06580 1343123 .. 1343134 +  -4.4  -3.43961   CTGATTTCACATAGC                TGCA ATGA TGCA                 TTGTGCCTGTTCTAA  51 84
RTCIAT899_CH06585 1344684 .. 1344702 +  -5.9   -3.4178   CCGTCAGTCCGAGCA             TGGCGCG CGCGC CGCGCAA             TTGTGCTGAAGTAAT  55 400
RTCIAT899_CH06620 1353531 .. 1353541 +  -5.4  -3.20841   TCTGAAGTGTCGCGC                 CGAT GCT ATCG                 TCTTGGTGTCGGTGT  50 469
        coxW 1355895 .. 1355924 + -11.5  -3.59979   CGTCGATCGTCGTGA       GAGA-TTGAGGCGC TGT GCGCCTCAAATCCC       TTTAGCGTGCGGAAG  77 18
RTCIAT899_CH06685 1363287 .. 1363303 +  -5.1  -3.93744   ATCGATAGCCGGCAC              CGAGAGT CGC GTTCTCG              TTGTGTTCTTTATCG  63 33
RTCIAT899_CH06695 1364955 .. 1364969 +  -5.6  -3.32159   GCGAGCCGAAAAGCA               CCGCAA AGT TCGCGG               TTAACTTTCGTATGC  53 114
RTCIAT899_CH06700 1366390 .. 1366423 +  -3.2  -3.72302   TTCATGTTTGTCTCG    GTCCGC---GCCCACCA GCA TGGTGGCCACCGCGGAC    ATTTTTTAATGTGGC  51 97
RTCIAT899_CH06705 1366867 .. 1366892 +  -6.1  -2.71263   TTTGGCGCAGCTCGT         TTGACGCCGTT CCGC AATGGCGGCGA          TGATTGCCGCAGGTT  50 84
       pstS2 1368122 .. 1368148 + -19.5  -3.72576   AGGCGAAAAAGTTGC         GGCGGACAGGG TATTT CCCTGTCCGCC         TTTCGTGACAGGACA 100 49
       pstC2 NONE
       pstA2 NONE
       pstB2 1370904 .. 1370922 +  -9.5  -4.74103   GTCAAATTTGCGAAA             GCGCGCT ATTCA GGCGCGC             TTTTTGCGTTGGGGA  95 58
        clpP 1373400 .. 1373411 +  -2.2  -4.85599   AATAGTACGCATTAA                TGCT ATGT AGCG                 TTTTTATGACATAGC  72 124
        clpX 1374901 .. 1374923 +   -17  -4.32857   CGTGATCACGAATCG           GGGGCTCGTC ATC GACGGGCCCC           TTTCTGTTTGAAAAA 100 50
         lon 1377762 .. 1377781 + -13.6  -5.24129   ATAAATGGACGAAAA            GACCGGCA TTTT TGCCGGTC             TTTTTTGTGAAAAGC 100 71
RTCIAT899_CH06750 1378243 .. 1378262 + -16.4  -5.28778   GGGTGGACAAGATTG            GGGCCCGC GAGA GCGGGCCC             TTTTTTATGGGTGAT 100 75
RTCIAT899_CH06765 1380417 .. 1380432 +  -4.6  -3.55444   CGCGAGCATGGCGCC              CTTCGC CGCG GCGTAG               TTTCCGACATAAGGA  52 401
RTCIAT899_CH06780 1383388 .. 1383424 +  -6.4  -2.53822   ACTGCTGCTGGCGCG   CGGGCAGGGAGCAG-GC TGAT GCGCTTCGCCCGGCTCG    ATATTCTCCGCTACG  48 7
RTCIAT899_CH06785 1386945 .. 1386991 + -10.2  -2.80307   TGCGTAAAAACAGGA ACATAGAGCATTTTCGCGATTC GAA GAAAAGCGGAAATGCTCTAGGC TATGGTGACGATTTA  66 109
        rkpU 1398492 .. 1398526 +  -7.1   -3.8917   CGCATATTGCATCGG    TTGGTGCGCTGCCGCA TAGA TGCTGC-GCGCGCAAA     TTGTTGTCGTTGAAA  65 227
        rkpA NONE
        rkpG NONE
        rkpH 1408431 .. 1408473 +  -4.1  -2.78679   TCAGGGGTATTGGCG GCCCGTT-CCTCGCTGATAT GGAA ATGCTGCCGAGGCAGCGGGC ATTTGGATGGCGCAG  43 97
        rkpI NONE
        rkpJ 1411802 .. 1411826 +  -5.5  -3.06302   CTAATCGCCCTTCTG          CGAAGCGGGTC ATT GGCCCGTCGCG          TTCGGTGGCCGTGAT  50 467
        nuoA NONE
        nuoB NONE
        nuoC 1414218 .. 1414237 + -11.4  -2.64794   CTGATTGTTGGCGTG            TGGCGGGC TTCG GCCTGCCA             TCCTCTGAAATTCCG  68 37
        nuoD NONE
RTCIAT899_CH06900 NONE
        nuoE NONE
        nuoF NONE
RTCIAT899_CH06915 1419106 .. 1419117 +  -4.4  -3.78934   TCTTGCGGGGACAAG                GCTT GGCA AAGC                 TTATTGTGAGCGAAC  58 131
        nuoG NONE
        nuoH 1422387 .. 1422402 +  -2.6  -3.60792   CATGATGATGTCGAT              TCTCGCT TCA AGC-AGA              TTTGGAGGTTGAAGA  47 36
        nuoI 1422900 .. 1422914 +  -3.4  -4.23758   GCGATCGATTCGCCG               TACCGC TGA GCGGAG               TTTTGAATATGCCGT  62 17
        nuoJ NONE
        nuoK NONE
        nuoL NONE
        nuoM NONE
        nuoN NONE
RTCIAT899_CH06960 NONE
RTCIAT899_CH06965 NONE
         mce 1432327 .. 1432341 +  -8.6  -3.05963   TGCTCCGTAGGCCGG               CAACCA ATG TGGTTG               TCTTGCGGTGACCAT  56 479
RTCIAT899_CH06985 1433554 .. 1433570 + -10.9  -4.16943   GAAAGCAAAAAAAAA              CAAGGCT AAA AGCCTTG              TTTTAAAGTATCGCG  86 233
        proS NONE
RTCIAT899_CH06995 NONE
RTCIAT899_CH07000 1437753 .. 1437768 +  -3.2  -4.07568   AGCCTCTCGCCGTCA              CCGACA TAGG TTTCGG               TTTTGGCGACGACAA  59 437
RTCIAT899_CH07015 1442759 .. 1442778 +  -6.5  -3.28924   CAATGATGGCCGGTC            CTTCAAG GAGCGG CTTGAAG             TTCTGGCGGACCATG  56 447
RTCIAT899_CH07025 NONE
RTCIAT899_CH07030 1445024 .. 1445059 +   -17  -2.75535   CGAGCCAATGTGGCA    TCGCCGAAGCGGAG CGTTCAAA CTCTGCTTCGGCGA     TGATTGAAATCTTGA  91 87
RTCIAT899_CH07045 1448261 .. 1448279 +  -3.8  -3.06796   AGGCCTCTGATGCGT             CTTGCTCT TTG AGGGTAGG             TTGGATGACGTCAGC  45 14
RTCIAT899_CH07060 NONE
RTCIAT899_CH07065 1451465 .. 1451481 +  -6.6  -4.49316   TGTATCTTTTCTGCC              GAGAGA GGAGA TCTCTC              TTTATTCTTGATAAT  75 349
RTCIAT899_CH07125 1465407 .. 1465418 +  -3.6  -3.28924   GCCTGCGACTTAGCA                CTGC GCCA GCGG                 TTCTGCCGCGACATC  47 28
RTCIAT899_CH07130 NONE
RTCIAT899_CH07135 NONE
RTCIAT899_CH07140 NONE
RTCIAT899_CH07145 1467156 .. 1467174 +  -4.4  -3.86346   GTGGTTGTTGATTTG             CTGGGCCG GAC CGGTCTCG             TTTCTCGGGGCATGG  58 42
RTCIAT899_CH07155 1468864 .. 1468878 +  -6.4  -2.80779   ATAGCGTGAAGCAAA               TCCACT TTT GGTGGA               TAATCTTGCTATTCG  50 74
        gatC 1469192 .. 1469205 +  -4.5  -3.54459   AAGTCGTCGAATAAC               GGTTC CTTC GAGCC                TTTCCGACCCGTTGC  52 27
        gatA 1470806 .. 1470827 + -17.3  -5.21709   CCACTTATAAGAAGG           GCCGTCCGG AAAT CCGGACGGC            TTTTTTCATATGCCA 100 102
RTCIAT899_CH07170 1472982 .. 1473023 + -13.1  -3.47751   GAATAGAATAGTATC GCCCGAC--GAGAGCCGCC TCATTC GGCGGCTCTCGTGTCCGGC TTATCGATTGTTCAA  85 62
RTCIAT899_CH07180 NONE
RTCIAT899_CH07185 NONE
RTCIAT899_CH07190 NONE
RTCIAT899_CH07195 NONE
RTCIAT899_CH07200 1477205 .. 1477218 +  -2.3  -3.53224   GCCGGCTCGTCCTTT               GGCCA CAAT TGGGC                TTTAGGCGCGACATA  47 48
RTCIAT899_CH07205 1477758 .. 1477786 + -18.9  -3.59895   CGCAGCAGGACTATG        TGCCCGCAGAAGC CTT GCTCCTGCGGGCA        TTGATTTAGCTTTAT 100 58
RTCIAT899_CH07240 1484069 .. 1484092 + -13.8  -4.44461   GACGGAAACGAAAAA          TCCGGCCGCG TCGC CACGGCCGGA           TTTTGTCAAATTATT 100 156
RTCIAT899_CH07250 1488919 .. 1488931 +  -4.7  -2.56095   TGACGGCTCCGGATG                GGGCG ATC CGCCG                TGGCTTCCATGTAAC  44 38
RTCIAT899_CH07255 NONE
RTCIAT899_CH07260 1491651 .. 1491680 + -10.7  -3.08197   TATTTGTCTGATCGA       CATGCCGCGGG GCTTTACA CCAGCGGCATG        TATATCTATGTCACC  69 49
        prfB 1492911 .. 1492926 + -11.8  -5.55664   TTCAAGCATAGAAAA              GCCCCG GAGA CGGGGC               TTTTTTTCATGGTGC 100 52
RTCIAT899_CH07280 1494858 .. 1494893 +  -3.2  -3.53012   GATCGACATCTCCGA   GCGCCGGCAGCAG-CC AGGTCG GGTCTGC-GCCTTCGC    TTTCCCACGGCGAGC  49 482
RTCIAT899_CH07305 1497287 .. 1497313 +   -13  -3.75629   TGGTTTGATAATTCT         GCGCCCTTTCCT GCC GGGAGAGGGTGC         TTTGCGTTCGAGATC  86 111
RTCIAT899_CH07310 1498804 .. 1498827 + -19.6  -4.13767   TATTCCTTTATAAGA          GGCCCCGCTG GAAA CAGCGGGGCC           TTTTCGCATCCGGAG 100 50
RTCIAT899_CH07315 1499371 .. 1499388 +  -8.5  -4.19817   TTGATCCAACGACAT             TATCACC GATC GGTGATA              TTTTCGATCGATGAG  77 37
RTCIAT899_CH07325 1501245 .. 1501269 +  -7.1  -3.56821   ACGGAAGATAATAGT          CGGCTGACC TGCAAGC GCTCAGCCG          TTTCGGAGGTATCAT  60 318
RTCIAT899_CH07330 NONE
RTCIAT899_CH07335 1503278 .. 1503314 + -15.2  -2.75064   GGTTTAACAGACACG    CGGTGCGTGGGGCTGA TATGT TCAGCTTTACGCGCCG    TAATTGCGTGGGCAG  83 453
RTCIAT899_CH07345 1503514 .. 1503528 +  -3.5  -2.55999   GGATTCTCGGCTACG               TGCTG AATAC CGGCA               ATTGATATCGGGTGG  42 6
        nusG 1504104 .. 1504119 +    -6   -3.9444   TTTCTACGAAGGGTT              GGCCTG GCGG CTGGCC               TTTCGTTCGAGTTTG  65 47
        rplK NONE
        rplA 1505468 .. 1505489 + -13.7  -3.53444   TCGGCTTTTAAGAAT           TCCCGGCCT TTCG GGGCCGGGA            TTTCCGGAGAAATCC  89 63
RTCIAT899_CH07365 1506273 .. 1506285 +  -6.2   -4.7889   CCAAGAAGGACGAAG                CCGC GTAAG GCGG                TTTTTCGCTGTTTAT  78 18
        rplL 1506737 .. 1506762 + -13.3  -3.82067   AGCTTGAAACTGCTT         TGGGAGGTGGT TTTT GCCGCCTCCCA          TTTGCCGTTTTTCTG  93 40
        rpoB 1511209 .. 1511219 +  -8.2  -3.54543   TTCGGATGCATGGCG                 CCGC AAG GCGG                 TTTAAAAGCGTCAGT  65 108
        rpoC 1515537 .. 1515558 + -17.3  -4.96501   TGTGAAAAATCAAAA           CCGCCCGGA GCGA TCCGGGCGG            TTTCTTTTTATGCGA 100 53
        rpsL 1516790 .. 1516805 +  -7.6  -4.68593   GTACGGTGCAAAGCG              TCCGAA GTAA TTCGGA               TTTTTAGATAATCCG  86 16
        rpsG 1517327 .. 1517338 +  -5.8  -3.38272   GGCTGATGCCAACCG                TGCG TTCT CGCA                 TTATCGCTGGTAATC  56 1
RTCIAT899_CH07400 NONE
RTCIAT899_CH07405 1520776 .. 1520797 + -15.9  -3.32963   TGACAATATTATGAT           GCAAGCGGC ACTA GCCGCTTGC            TTATGACATGGAAAT 100 78
        rpsJ NONE
        rplC NONE
        rplD 1522633 .. 1522645 +  -5.5  -2.75844   AAGGCTGCAGTTGAA                GCTCT AGA GGAGC                GTTTCAAGTGACGGA  47 2
        rplW NONE
        rplB NONE
RTCIAT899_CH07435 NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ 1526184 .. 1526205 + -10.1  -4.68846   ACGAGCTTGGAAGCA           GGACGCTCG AGAA CGGGCGTTC            TTTTGCTTTATTGAT  95 90
        rplN NONE
        rplX NONE
RTCIAT899_CH07475 NONE
RTCIAT899_CH07480 NONE
        rpsH 1528315 .. 1528346 + -12.4  -3.00298   TGTTGGTGGCGAGGT      TCTCTGCTCGGTCT TCTA AGATCGAACAGAGA       TATCTCCTTCGAAAC  75 7
        rplF NONE
        rplR 1529293 .. 1529324 + -22.4  -3.01712   CCTTCTAATCAGATT      TCCGGCCGGCGATCC CAA GGA-CGCCGGCCGGA      TATTCACCGGACCGC 100 33
        rpsE NONE
        rpmD NONE
        rplO 1530719 .. 1530746 +   -20  -4.27617   TAATATTATCAATAA        TCGCCCGAAGTG ACTT CACTTCGGGCGA         TTTTGCTCCCATATG 100 38
        secY NONE
RTCIAT899_CH07520 1533003 .. 1533043 + -11.2  -4.16943   TCGCGACATGCTATG CGATCG-GCGCGGATTTCC AACG GGAAGTCCGGGTACGGTCG  TTTTGACATGTGGCG  88 99
        rpsM 1533528 .. 1533550 +   -17  -4.35524   GGCAACCGGATTTGG           GAGGCTGGCG GTC CGCCGGCCTC           TTTTGAGTTTGAAGC 100 47
        rpsK 1534049 .. 1534069 +  -6.8  -3.39449   CCACTCACGACACCG           GCCGGG-GT AGAT GCGCCCGGC            TTGGTGTTACTCAAG  58 47
        rpoA NONE
        rplQ 1535634 .. 1535667 + -19.1  -2.92613   GCTTCGGATTAAATA     TAAAAGGCCGGATGA GCGA TCATCCGGCCTTTTG      TCGTTTCCGCTACGG 100 47
RTCIAT899_CH07545 1536214 .. 1536238 +  -9.3  -2.75064   TTGCCTAGCTTCTAT          CTCGGCGAC CTCGATC GTCGCTGAG          TGATTCACTAGGCCA  60 46
RTCIAT899_CH07550 NONE
RTCIAT899_CH07555 NONE
RTCIAT899_CH07560 NONE
RTCIAT899_CH07565 1540091 .. 1540102 +  -7.2  -3.42663   CGCAACCGGCTTGCG                CGCC GCCC GGCG                 TCTTTCCATCATGAT  58 93
        ilvD 1543932 .. 1543944 +  -4.7  -3.71873   GCTTTCGAGCTTTAT                CGCCG CGG CGGAG                TTTGGCTGTCGCTCC  55 124
RTCIAT899_CH07590 NONE
RTCIAT899_CH07595 1547445 .. 1547480 +  -6.8  -3.64236   AATGACCAGCCGTAT    CGGCGATTTCTTGGCG ACAC CGCCGAGAAACTGATG     TTTCAGCGTTTCGGT  60 187
RTCIAT899_CH07620 NONE
RTCIAT899_CH07625 NONE
RTCIAT899_CH07630 NONE
RTCIAT899_CH07635 1555725 .. 1555744 +   -10  -2.56715   ATAGCCCATCTTCAC            GC-TGGCGC CGA GCGCCACGC            TGCCTTCATCCGGCT  60 509
RTCIAT899_CH07645 1558408 .. 1558440 +  -6.1  -4.72846   CTTTCATGCTTCAGT      TGCGATAGGCCGGCC GCG GGCGCGACGATCGCA      TTTTTCGCTGTATCG  78 121
        wrbA 1568790 .. 1568809 +  -9.2  -4.87893   ACATCGATTGAGAGA            GGCGCGGT GAAA GCTGCGCC             TTTTTCATTGGGATT 100 53
        ilvA NONE
RTCIAT899_CH07700 1571474 .. 1571515 +  -9.3  -3.65351   CCGTGCGGAACATCT TCGC-GCCGGCGGGGGCGTT GAC GGCGCCGCCGTCGACCGTGA TTTCGATCGCCGTGA  70 159
RTCIAT899_CH07710 1572921 .. 1572944 + -13.8  -2.84812   CAGGCACAATAGCAA          AGCGGCCGGT TTTA ACCGGCCGCC           TGTGATCATCTGAAT  79 29
RTCIAT899_CH07720 1575003 .. 1575020 +  -4.7  -3.71848   TCCGGGAAGTTGCCG             CCGCCGC CTGC GCGGTAG              TTGTTGGTGACGACC  57 340
RTCIAT899_CH07735 1578369 .. 1578381 +  -5.5  -4.08692   GGTAGCAGGACAGCA                CGTTG GGG CAGCG                TTTTACCGCCGCTTC  65 211
         ald 1579945 .. 1579980 + -11.1  -4.42386   TGCGCGCAGATCAGA    TGGAAGCGCCGGCAT CCGCGT ACGCCGGCGCTCCTA     TTTTATCGATCCGGC  93 48
RTCIAT899_CH07775 NONE
RTCIAT899_CH07780 1585215 .. 1585228 +  -5.9  -3.01791   GGAGCCGGCCACCCA               CTGCC AGTT GGCGG                TATTGGCGGCCGGAT  49 314
RTCIAT899_CH07790 1587780 .. 1587806 + -14.5  -5.03994   TTTTCAGTAGGTATA         GCCCGGAAGTT TTCCC GACTTCCGGGC         TTTTTATGTGTCGGA 100 54
RTCIAT899_CH07810 1592090 .. 1592101 +  -7.2  -4.13767   ATAGGAAGTTTAGTT                CGCC GGGC GGCG                 TTTTCGCGTCCACCA  74 37
RTCIAT899_CH07825 1593490 .. 1593511 +  -8.7  -3.23893   AGTTCAAGGTATGGT           TGCTCTCGC GAAT GTGAGGGCA            TGTTCATGTGTCGTT  65 228
RTCIAT899_CH07830 1593826 .. 1593865 + -26.6   -4.3587   AAGTTCCTCTTAAAA  CAATAGGGCCGCCGCCGG AGTT CCGGTGGCGGCCTTATTG   TTTGTGTTATTCCTC 100 65
RTCIAT899_CH07855 1598673 .. 1598692 + -11.4  -5.55769   TGATTGAGCTTGCGA            CAGGCGCC TTCG GGTGCCTG             TTTTTTATTGTCGCG 100 57
RTCIAT899_CH07860 1599776 .. 1599798 + -18.4   -5.5074   TCGGGTAGCCGATCC           GCCGCTCCGG GCT CCGGGGCGGC           TTTTTTATTGACTTG 100 53
        valS 1602839 .. 1602862 + -12.4  -5.48063   CGAAGAATCGAAAAA          GGCATGCGGT ATTC GCCGCGTGCC           TTTTTTCTATTGCCT 100 150
RTCIAT899_CH07870 1604531 .. 1604559 +  -9.6  -5.26316   TCACTCTATTGTCGA       CGTCGCG-AGCTC TTAC GGGTTTCGCGACG        TTTTTTATAGGATCG 100 80
RTCIAT899_CH07875 1605975 .. 1606001 +  -4.2  -4.11216   ATTGGCATCGCGCCG         GGCTTCCGTCCG GAA CAGACGGGTGGC         TTTTCCCGATCGGGA  62 40
RTCIAT899_CH07890 NONE
        argS NONE
RTCIAT899_CH07900 1613447 .. 1613476 + -17.3  -2.71924   CAGATAGGAAACTTG       GAAAATGGCGAGC ATCG GCTCGCCGTTTTC        GTTTGGAGCGCGCTG  91 44
RTCIAT899_CH07905 NONE
RTCIAT899_CH07910 NONE
        scpB 1616301 .. 1616314 +  -5.2  -3.12668   TTGGAGACGTTCGGT               CGCC CGCATC GGCG                TTCGCTATCCCGATA  50 159
        tatA NONE
        tatB NONE
        tatC 1618264 .. 1618287 + -16.8  -3.45849   TATTGCCGTTTCGAC          CTCCGACCGA GACC TCGGTCGGAG           TTATACTCATGTCAA 100 70
        serS NONE
        surE NONE
RTCIAT899_CH07945 1621075 .. 1621088 +  -2.3  -3.79764   CCCCCATGGAAACGG               GCGAT TGGC ACCGC                TTCATTTTCTATGGT  52 60
RTCIAT899_CH07950 1622916 .. 1622951 + -14.8  -3.89501   TGCGTCTCAAGGACT    CTGCAAAAAGCCCGGT CAAT GCCGGGCTTTTTGTCG     TTTATGGCGATGTTG 100 45
        yajC 1624414 .. 1624444 +  -3.9  -3.06261   CCGCGTAAGGCTCTT      TCCG-AGAGGCGGC TTCC GCCGTCGCTGCGCA       TCTTCCAAATTCGAG  45 33
RTCIAT899_CH07965 NONE
RTCIAT899_CH07970 1627481 .. 1627495 +  -2.7  -2.92026   CGCGCGCCGTGGCCG               CCGCG CTGAT CGCCG               TCTGATATTCGGATC  42 6
RTCIAT899_CH07975 1628393 .. 1628429 +    -3  -3.84451   ATACACCAAGCTCGC   GCAAGTCTCGG-CGTCT ATGG AGATGACCGGCACTTGA    TTTGCATTTCAGGGG  54 42
RTCIAT899_CH07980 1629365 .. 1629388 +  -2.3   -3.5764   CAGCTGCGAAGCGGC          CCGCGAGCA GGCCGA TGCTGGCGC           TTTCGACATAGCCTT  49 476
RTCIAT899_CH08005 1631755 .. 1631770 +  -7.5  -3.53945   CGATCTGAATCGGCC              CGGCG CGCCAC CGCCG               TCTTGTTGTCTGATG  62 33
RTCIAT899_CH08010 NONE
RTCIAT899_CH08015 1633906 .. 1633916 +  -4.6  -4.07568   CCCCATGGGCAGGCA                 TCGC CAT GCGG                 TTTTGGGAACGCGGG  62 150
         tig 1635806 .. 1635827 + -13.7  -5.73339   CCGACTGAAATTGAA           GCTCTGCCG TTCG CGGCAGGGC            TTTTTTTGTGCTTAT 100 53
RTCIAT899_CH08030 1636672 .. 1636716 + -12.2  -3.53091   AAGTCCTGCCCCTGA TCGAAGCCCTTGCGTGAGGCC TACC GGCCTCAAGCAAGGG-TGAGA TTTCACGGACGCGCT  81 9
RTCIAT899_CH08065 1644026 .. 1644066 +  -6.1  -3.19255   AGAATTAGCCTTGCG  TTTCAGGCGATTTGGACGC AAA GCGTTCGGATAGGCCGAAA  TTGGATGTATCTTGA  54 33
RTCIAT899_CH08070 1645443 .. 1645459 +  -6.6  -2.66316   ACAATGTCATTTCGC              TGAACG CTCAT CGTTCA              TAATATCGTGCGGCA  51 6
        metM 1646846 .. 1646881 +  -8.2  -2.71924   AAAGAATAGTCTCAG    TAGCG-GCGGCGTACCT CAA AGGGACGCCGCTCTCAA    ATTTCGGGAGAGATG  57 32
        recJ 1648843 .. 1648862 +  -7.8  -3.40522   TAACCGATAGACGAA            GGGCGC GTGCTGTG GCGCCC             TTATAGTCAGCACCT  61 169
        cspB 1651684 .. 1651699 +  -7.5   -5.4833   TGAAAAATCGAGAAA              GCCCG GATCTG CGGGC               TTTTTTGTTGCCTGC 100 114
RTCIAT899_CH08115 1653226 .. 1653246 +  -2.6  -2.79456   GGGGAGCACCAATAT           TCGGAAGCT TAGT AG-TTCCGG            TGCTTGCCTTGGCTT  39 327
RTCIAT899_CH08125 NONE
RTCIAT899_CH08130 1655066 .. 1655086 + -13.3  -3.52906   AACAGCGTGACAATA            CCTACCCCT TTA GGGGGTAGG            TTGTCTCGCGTTGTC  89 112
RTCIAT899_CH08135 NONE
RTCIAT899_CH08140 1656550 .. 1656568 + -11.7  -4.54727   GGCCATGAAACCCGA             CAGCCGC CTTGT GCGGCTG             TTTTCATTTGAGGCG 100 81
RTCIAT899_CH08155 NONE
RTCIAT899_CH08160 NONE
RTCIAT899_CH08165 NONE
RTCIAT899_CH08170 1661711 .. 1661733 +  -6.9  -4.19177   ACACCACCACAGAAC           GAACCTCGC CATTA GCGGGGCTC           TTTGTATTGGAGACT  70 62
RTCIAT899_CH08175 1663012 .. 1663029 + -14.1  -3.06509   GGCTTAATGCTGTGA             GGGCGGC TTTG GCCGCCC              TATCATTCTTTGGGA  91 34
RTCIAT899_CH08180 1663909 .. 1663922 +  -2.3  -3.80174   CGCCAGGAGGCTAAC               ATGCC AGTC GGCAA                TTATTCTGCCAATGT  52 41
RTCIAT899_CH08185 1664548 .. 1664562 +  -4.2  -3.73224   TACGGTTTACGGCCC               ACTTCC ATT GGAAGG               TTTCGTCGGCCGTAA  55 47
RTCIAT899_CH08190 NONE
RTCIAT899_CH08195 NONE
RTCIAT899_CH08200 NONE
RTCIAT899_CH08205 NONE
RTCIAT899_CH08210 1667088 .. 1667115 + -14.2  -5.44119   AACATCGACATTTCC        AACAATGCCCGC TCGC GCGGGCATTGTC         TTTTTTTAGGGTGCG 100 257
RTCIAT899_CH08215 NONE
RTCIAT899_CH08220 1671313 .. 1671330 + -10.5  -4.39571   AAATTCATTCATGAA             GGCTCGC TCGC GCGGGCC              TTTTCAGTTTCTGGA  93 53
RTCIAT899_CH08225 1671996 .. 1672031 +  -2.4  -3.70019   AGCTACCGCACCGCT    TCAGGTGG-GGCGGCCG GAG CGGCGACGACTGCCTGA    TGTTTTGCGCTTCGT  50 70
RTCIAT899_CH08230 NONE
RTCIAT899_CH08235 1674551 .. 1674567 +  -7.2  -5.06816   TCACGGTCAGCTAAC              GCCTGC GTCAA GCGGGC              TTTTTCTTAGGAAAT  91 27
RTCIAT899_CH08240 NONE
RTCIAT899_CH08245 1678563 .. 1678584 +  -7.9  -4.61482   GCATAAGGTAACGAG           AAGGCCCGT TACA GCGGGCCTC            TTATTTTTTCAAGGA  83 58
RTCIAT899_CH08250 NONE
RTCIAT899_CH08255 1679413 .. 1679434 + -11.5  -3.43961   CTCAGCACAAGCCTT           GGGCGCTGG ATCG CCGGCGCTC            TTGTGGCTGTTCTGG  75 49
RTCIAT899_CH08260 NONE
RTCIAT899_CH08265 1680367 .. 1680379 +  -4.1  -3.75295   TACCTGACGAAGGGC                GATTG CTT CGATC                TTTCGCTGATTTATA  53 77
RTCIAT899_CH08270 1682613 .. 1682636 + -15.3  -5.24129   GGCAAAACACACAAA          GGCGTGCCG AATCAA CGGCACGCC           TTTTTTGTCGCAAAA 100 446
RTCIAT899_CH08290 1684539 .. 1684554 +  -3.2  -4.14739   ATGGCGGAAACTTAC              CCGG ACCCATTA CCGG               TTTTCCCGTCAATGG  62 124
RTCIAT899_CH08300 1685439 .. 1685460 +  -5.1  -3.39657   TTCTTTTCGGCCGAT           CAGGCGAGG GAGT TTTCGTCTG            TCATTTTCTTTTCCT  53 153
RTCIAT899_CH08325 1688627 .. 1688640 +  -2.4  -4.71222   GAAAACGGATCAAAG               TGAC CATGGC GTCA                TTTTGCTTTTGCTCT  68 493
RTCIAT899_CH08345 1689785 .. 1689796 +  -3.6  -3.17723   CCCATTGCAAAGAAT                GCGG CAGC TCGC                 TTAGCTTCGCAATAG  47 10
RTCIAT899_CH08350 1690710 .. 1690729 +  -8.6  -2.61695   TCGGAGGCGGGCATA            CCAGTG-GC TGA GCGCACTGG            CTATTTCAGCGTCAC  56 56
RTCIAT899_CH08355 1691159 .. 1691174 + -10.4   -5.5604   GGCGGCGTAGAAAAG              GCGGCA GAGA TGCCGC               TTTTTTATTCCTTGA 100 31
RTCIAT899_CH08365 1692843 .. 1692855 +  -6.2  -2.90075   GCTCAACGCATATTG                GGGC TGAGC GCCC                TGTAATTGACCAAAA  51 19
RTCIAT899_CH08370 1693729 .. 1693757 +  -8.1  -2.71144   ATTTTACCTGTTGCA        GCGGGGAGATGAA CCG TGTATCTCCCCAC        TCGTTCCGCAGGATC  57 71
RTCIAT899_CH08380 1694749 .. 1694761 +  -3.4  -4.56597   TGCAAGTCCGCCGAT                GATC CTGTC GATC                TTTTTCACGGCCCGC  68 388
        metC 1701264 .. 1701285 +  -5.8  -4.63218   CAGCCGGAAAAGCCG           CGCAGCAT CTGCTC ACGCTGCG            TTTTGTTGCCGGCCG  76 450
RTCIAT899_CH08430 1703335 .. 1703362 +  -8.4  -3.34895   CGGCCCTCGGCGTAG        TCGGCGCTGTCGA AAG TCT-CGGCGCCGA        TTACTTCCGCCTCGC  59 95
RTCIAT899_CH08440 1705102 .. 1705112 +  -2.4  -3.54424   AGCGAATCCGAAAGA                 TCGC GAC GCGC                 TTTAGGGGGATCCAA  47 113
RTCIAT899_CH08445 1705479 .. 1705503 + -15.1  -5.27938   GTGATCGAGTATTCG          GGCCGTATTTC ATT GAAATGCGGCC          TTTTTCTTTGGCAGT 100 59
RTCIAT899_CH08450 1706189 .. 1706228 + -15.8   -4.2828   GAAAGGCAAAATTTC  CG-GAAAGGCCGGCTGCGC GAT GCGTGGCCGGTCTTTTGCG  TTTTGGTGCATCGAA 100 50
       clpS1 NONE
        clpA 1709382 .. 1709407 + -16.3  -5.05079   TTGAGAAAAATGAAA         CGGCTGCATTA GAGA TAATGCAGCCG          TTTTTATATGGTTAT 100 56
RTCIAT899_CH08485 1713535 .. 1713553 +  -9.6  -3.09492   TTGTTCCGCCCGGTG             GCATTCTC GAA GAGGATGC             TGTTCGCCTTGCGGA  67 170
        rpsB 1714413 .. 1714460 + -13.6  -4.75372   AAGCGCAATGACATC CGGGATAAGGCCGTTTGCGACTT AAC AAGTT-CGGGCGGCCTTATCGCG TTTTTGGTAACTGCT 100 75
         tsf 1715720 .. 1715745 + -16.9    -3.322   TCAGGGAAAACGTAT         GGGCATCGCGT GACA ACGCGGTGCCC          TTCGTGTATCCGGCT 100 183
        pyrH 1716526 .. 1716554 +  -6.6  -2.70932   GACAATTGATATTCC        CGTGACGTCGGG TCAGC CCCGGTGTCGCC        TCATTACAGGGGAGC  52 32
         frr NONE
        uppS NONE
       cdsA1 1718842 .. 1718852 +  -4.6  -4.23758   GCAATTCCAGGAAAA                 TCGC GCA GCGG                 TTTTCCGTCTGGAGT  66 48
        rseP 1720763 .. 1720773 +  -2.4  -3.05816   AAACGACACACGTGG                 CCGG AAT CGGG                 TTCGCTCGAGGCTGG  42 169
        yaeT 1723201 .. 1723211 +    -4  -2.62111   TCTGGAGCTGGTGCT                 TATG GAA CATA                 CTGGTTTTTTCCCGC  42 76
        lpxD NONE
        fabZ NONE
        lpxA NONE
RTCIAT899_CH08545 1726431 .. 1726441 +  -2.4  -3.60971   CGAGGGCTTCATGTG                 AGCG CGG CGCC                 TTTGAAGCTTGCCGT  47 25
        lpxB 1727594 .. 1727615 +  -8.7  -5.24796   TCTAGCCCATAAAAA           AACCGGTCA TCTC TGACCGGTC            TTTTTGTTATATCCA 100 10
RTCIAT899_CH08555 1728214 .. 1728243 + -10.1  -2.78679   TTCAAGCGCAGCGTT       TCA-AACCTCCACC TCT GGTGGAGGTCATGA       CTTTCAATACCGAAG  64 66
RTCIAT899_CH08565 1732347 .. 1732360 +  -5.2  -3.74872   CTTGACGCGATCCGG               CCCG AAGATG CGGG                TTTCATAGGCTGGGT  57 63
RTCIAT899_CH08575 NONE
        kdsA 1735252 .. 1735274 +  -4.2  -3.85698   GAAATTTCCGCGCCT           TCGATTAAGA CGA TTTAAATCGA           TTTATAAACCAGCGA  58 123
         eno 1736634 .. 1736651 + -14.1  -5.45652   TTCGCTTGGATCGAA             CCGCGCC TTCG GGCGCGG              TTTTTTGTTGACCCT 100 82
RTCIAT899_CH08590 1737112 .. 1737136 +    -8  -2.75822   TTCAATAAATAGCCA          CAATTAACTG AATTC CGGTTAATTG          CATTTTTATGATTTA  57 29
RTCIAT899_CH08595 NONE
RTCIAT899_CH08600 1739682 .. 1739693 +  -3.6  -3.73775   CCGAAGTGGTCGATG                CGGT GAAG GCCG                 TTTGCTACAAGTAAG  53 0
RTCIAT899_CH08605 1741095 .. 1741117 + -13.6  -3.66378   CCTAGAGCCGGATGA           TTTTAGGTCG AAT CGACCTAAAA           TTTGAATCCGCTCTA  89 42
RTCIAT899_CH08610 1741848 .. 1741858 +  -3.2  -2.52464   TCGTGCGGATGATGC                 TCGG TCT CTGA                 TAGATTCAAGGCGCC  40 15
RTCIAT899_CH08615 NONE
RTCIAT899_CH08620 NONE
RTCIAT899_CH08625 NONE
        lipA 1745277 .. 1745288 +  -2.2  -4.19746   CAGAATCGCCATTGC                CGGT CCGA ACTG                 TTGTTTTAGCGTAAA  60 350
RTCIAT899_CH08640 NONE
RTCIAT899_CH08645 1746818 .. 1746828 +  -2.4  -4.05788   GGCGCCATGGACCAT                 CTGC AGC GCCG                 TTTCCTTTGAAACCG  57 275
RTCIAT899_CH08660 NONE
        ntrB NONE
        ntrC 1752145 .. 1752169 +    -3  -4.08216   AGTTCCCGAACGGCT         TGACAACGCGAT CCG AT-GCGTTG-CA         TTTTCGCCACAATGC  58 23
        ntrY NONE
        ntrX 1756046 .. 1756071 +  -8.9  -2.73124   TCGCAAGCTGAAGTC         GTTGGGCGTCT GATC GGCCGCCCGAC          ATTTCGAACATCACA  60 13
RTCIAT899_CH08685 NONE
RTCIAT899_CH08690 1757371 .. 1757395 +  -4.2  -2.62263   AAAATGATTCCCTCA          TCCCGGAG ACCGTAAAG CACCGGGA          TGATATGCGCGCCGT  44 75
        hflX 1758733 .. 1758748 +  -4.6  -4.18018   GCGAAGACTGGGAAT              AGGCGT TTTT ACGCCG               TTTTGACTCCGGCAA  62 24
RTCIAT899_CH08710 NONE
RTCIAT899_CH08715 NONE
RTCIAT899_CH08720 NONE
RTCIAT899_CH08725 1764490 .. 1764516 + -13.8  -3.05294   GAAAGGCGGCCGTTG         CGGCAATTTGAC AGC GTCGGATTGCCG         TATTCAAGCCTTTCG  84 45
RTCIAT899_CH08730 1765555 .. 1765578 + -10.2  -4.77759   CAATGCTAAATGAAA          GGCGGTTTCG GCAA CGGGGCCGCC           TTTTTCATGCGTTGT 100 52
RTCIAT899_CH08760 1768708 .. 1768738 +  -3.1  -2.72558   CCGATAACGTTATTA      CCGCGCTCG-CCTC CGCG GAGGTCGTGACCGG       TACTTACGCAATTGT  41 81
RTCIAT899_CH08770 1769424 .. 1769468 + -23.2  -3.57144   AGAGTAACGAACCGG TCGCGGTCAACTTTACCG-CC AGCT GGATGGTAAAGTTGACCGCGA TTTCAGAGTGAAAAA 100 152
RTCIAT899_CH08780 1770809 .. 1770823 +  -7.1  -3.04443   AAATCGGCTAAGTCG               GGCGA TATTT TCGCC               TCTCGTTCTTCTCGG  54 30
RTCIAT899_CH08785 1772275 .. 1772309 +    -2  -3.33261   GCATCGATTGCATGC     GTTCCTCGACCAACCG GCC CAGTTCTTCGAGCGAC     TTCTCCGCGTTGGCA  44 469
         pcs NONE
RTCIAT899_CH08800 NONE
RTCIAT899_CH08805 NONE
RTCIAT899_CH08810 NONE
RTCIAT899_CH08815 1778605 .. 1778622 +  -4.1  -2.70932   GCGTCGCTCGGCAAA             GC-CTTCG TTC CGGAGCGC             TGATTGCAACAGCCG  43 5
RTCIAT899_CH08820 1779782 .. 1779800 + -14.6  -5.08601   AGTTTAAGTTGAAAA             GGGGCGTT CAA AACGCCCC             TTTTTGTTGCGCTGC 100 52
RTCIAT899_CH08825 1780872 .. 1780904 + -24.9   -2.8547   TAAGACGAAAGCCCA      TCGCACCGGCTCGGC AAT GCCGCGCCGGTGCGA      TATCCTGTGCAAGAT 100 38
RTCIAT899_CH08830 NONE
RTCIAT899_CH08835 NONE
RTCIAT899_CH08840 NONE
RTCIAT899_CH08845 1785265 .. 1785279 +  -2.8  -2.88737   ACTCTCGCCGAGGCC               TAAAGG TCG CCTTGA               ATTTCGTCGTAGTTC  42 23
        glmU NONE
        glmS 1788689 .. 1788745 +  -3.1  -2.68823   CCTTCCGCCGCGCAT TTGC-CGTCACGTCCTCGTGAGCCGATC GCTT GTTCGGCTCAC-AG-ATGTGGCTAGCGG GTTGTATGCCGCGCC  40 45
RTCIAT899_CH08860 1789575 .. 1789593 +  -5.2  -2.85446   TGGTTGGATCAATAG             ATTCGCGT TCT GCGCGAAC             TGTCATGCCTTTATC  47 57
RTCIAT899_CH08865 1791695 .. 1791715 +  -6.8  -3.06302   CTGGTGAAGCTGCGC            CAGGCCGA AGCGC TCGGCGTG            TTCGATAACCATGAT  52 451
RTCIAT899_CH08875 NONE
         mfd 1797882 .. 1797896 +  -5.6  -2.87881   AATGCCGCACCAAGA               ATGGCC TGG GGCCAA               TATGTGAAACGCTTG  48 507
RTCIAT899_CH08895 1799897 .. 1799924 +  -9.8  -3.56092   AAGAAGGGCACGCCG        TTGACGCCGATC TTCT GGGCGGCGTCGA         TTTCGCCGATGATAA  70 233
RTCIAT899_CH08910 1803302 .. 1803319 + -12.7  -5.27335   TATCCTATAAAAAAA             GCCCGGA GCGA TCCGGGC              TTTTTCTTTGCGCAG 100 57
RTCIAT899_CH08930 1807634 .. 1807692 +  -3.1  -3.13033   CAATGCGATTGCGCC CGGAGGCGCGT--TCACCTTGCCCTCATG GAT CATGAAGGCAAAGACATCACGCGGCTCGG CTTTGATTTTGCGTT  45 64
RTCIAT899_CH08945 1812211 .. 1812226 +  -4.6  -4.87786   CGACTGACTTTAAAA              CCCGTC TTTT GGTGGG               TTTTTATCAGCTTCG  77 53
        gyrA 1817127 .. 1817162 + -22.8  -2.90496   GAAGTCGAAGGTTTT    CGATCGCATGAGCCTG GCAA CAGGCTCATGCGATTG     TCATTTGAGGCAAAG 100 93
        coaD 1819701 .. 1819717 +  -2.3  -3.17194   CCCGAACGGAGCATC              CATGAAA CTC TTTCATA              TTGCATTGGCAGGAT  43 54
RTCIAT899_CH08995 NONE
RTCIAT899_CH09000 1820822 .. 1820866 + -17.9   -3.6682   TGATCGTGATTATTC CTGAAACCCGCTTCTTGCGCC TTT GGCGTGAGGGGCGGGTTTCGC TTTGCCTGGATGAAC 100 38
        queA NONE
         tgt 1823282 .. 1823300 +  -9.6  -2.91681   GCCCGCGACGCGGAA             CTTGACCA TTG TGGTCGAG             TGTCTCGCGTTGGCG  65 187
RTCIAT899_CH09015 1823810 .. 1823852 + -12.1  -3.36515   AACATCATTTTGAGC CGGCTGGAA-CGG-GCTTGCC TTG GGCAATTTCCGCTTCCGGCCG TGTTTCAAAATGAGC  80 43
RTCIAT899_CH09020 1824959 .. 1824988 + -17.3  -4.49756   TGGTCGCAGTTCATA       CAGCGCGTTTTTC CTAG GAAAGACGCGCTG        TTTTGCTGTTTGGGC 100 48
RTCIAT899_CH09040 1828350 .. 1828363 +  -2.3  -4.37092   GACGAAGACGAAGGC               ATCGG CAGC CCGAA                TTTTCTCGGCAAGCT  63 410
RTCIAT899_CH09065 1833349 .. 1833393 +  -5.7  -3.76781   TTACGTAGTGAGCTC GGTCTTCGGGAATTCGCGAAG GGA TTTAATGATTTCGCGAAGACC TTTCGTGAGATGTTT  60 83
RTCIAT899_CH09075 1834756 .. 1834766 +  -4.6  -3.77464   CATTCCGCTCGAAAG                 CTGG CAG CCGG                 TTTCCTCGGTGATCT  57 227
RTCIAT899_CH09085 1835773 .. 1835801 + -13.1  -4.24342   CCATGGAGAAGTTAA        CCTGCCGCATTAC AGG GTGAGGCGGCGGG        TTTCTTCGTGCAAAA 100 120
RTCIAT899_CH09090 1837087 .. 1837097 +  -5.4  -3.72241   TGGTTGGCGAGATTT                 TCGA GAG TCGA                 TTTCAGTCCTTCGTC  58 233
RTCIAT899_CH09120 1842492 .. 1842504 +  -3.3  -3.19653   TTGGAAGGGTTGCCG                TAGCC AAA GGCGA                TTGATCAGCTTATAA  45 93
RTCIAT899_CH09125 1843714 .. 1843724 +  -6.8  -2.72461   CCTGGAAAAGGCGTT                 CCGA TAT TCGG                 CTTTCAGACCCGTTA  50 271
RTCIAT899_CH09165 1852407 .. 1852423 +  -3.5  -5.02074   GCCGATTTTTCGAAA              CCGGGTG TGG CTACCGG              TTTTTTGCCCAATCA  77 208
RTCIAT899_CH09175 1853384 .. 1853402 + -14.6  -3.54424   CTGGTCAAGTCATGA             CCTCCACC AGA GGTGGAGG             TTTGAAACGCTGCGC  95 43
RTCIAT899_CH09205 NONE
        trpD NONE
        trpC NONE
        moaC NONE
RTCIAT899_CH09225 1864028 .. 1864069 + -10.1  -2.73468   TACTGATAGTATTGC GGATG-CGAGAGCGGCGCGG TTT CAGCGTCCTTCTCGGCGTCC TGCTTGCCGATATTG  61 477
        tehA 1866044 .. 1866060 +  -3.7  -3.97444   CGGTAGAGCTCAATC              TCACTTT TGG AGGGTGA              TTTGCTTGATCATGT  58 35
RTCIAT899_CH09240 1866709 .. 1866729 +  -9.8  -3.53091   AGAAAATCTTCACGA            CCACCTTT TCAAT AAAGGTGG            TTTGCAACAAGCGCT  71 301
RTCIAT899_CH09245 1867449 .. 1867460 +  -7.2  -2.71144   CTGATGGCCGAAAGC                CGGC AATG GCCG                 TCCTTCCGCCAGATA  50 384
RTCIAT899_CH09255 1869544 .. 1869558 +  -3.4  -4.08767   CAAGCTCTAACGCTT               GCGGTG TCG CGCCAC               TTTTCGGCAAATGCA  59 117
RTCIAT899_CH09265 1871143 .. 1871154 +  -5.8   -3.5393   TTCGATCGGGCCGTT                GAGG TGCC CCTC                 TTTGAAGGGAGTGCT  55 120
RTCIAT899_CH09290 1876273 .. 1876289 +  -8.7  -2.87132   AAACAAAGATGTAGA              GCGCTTC GGT GAAGTGC              TCTATACCAGCCGGC  62 40
        parE 1883052 .. 1883075 +  -5.8  -3.74872   ACACCGGTGGCTGGG          GCCGAGCGCG CATG CGCGCATGCC           TTTGATCCCATCCAT  60 308
RTCIAT899_CH09320 1884359 .. 1884369 +  -6.8  -3.65351   TTTTTCGAGCGCCGC                 CGCT TCG AGCG                 TTTCCATGAGGCTGC  60 201
RTCIAT899_CH09345 1888568 .. 1888578 +  -2.4  -3.91897   TTCATTCCGCCCGGC                 GCCG CAG CAGC                 TTTCTCGGTGGGGCC  52 116
        folE NONE
        hisI 1894591 .. 1894603 +  -4.1  -3.34398   TTACAAGCAGTAGAT                CTATC GGG GATGG                TGTTTCAACCAGCCA  49 28
RTCIAT899_CH09385 1895828 .. 1895844 + -12.3  -3.33696   CGCTAATCGCTGCAA              TCGACCC AGT GGGTCGA              TTGCTTCGGCCGGGC  80 197
RTCIAT899_CH09400 1898301 .. 1898317 +  -5.1  -3.95073   CAGTGCGGAACAAGA              TAGGTGA TCG TCTCCTA              TTTATGCCTCTGAAA  63 49
RTCIAT899_CH09405 1899057 .. 1899070 +  -3.8  -3.13593   TCCCGTCACGCAGCG               TCGC GAAATA GCGA                TCTCTGTCTTCTCAT  45 52
RTCIAT899_CH09410 1900309 .. 1900337 +  -8.1  -3.80535   AATTTTAATCGAATT        CGCCGCGAACTTG AAT CAAGTTTTCTGCG        TATTTTATGAGAATT  71 269
RTCIAT899_CH09415 1901155 .. 1901185 + -18.4  -4.54727   CAGGCCGGTGCCTCC       GAGCCGTTCCCG CTGTCCC CGGGAACGGCTC       TTTTCATTTCGCGGC 100 119
RTCIAT899_CH09420 1902127 .. 1902138 +  -3.6  -3.14931   ATGATGCCGCGCCCG                CGGC AATG GCTG                 TTGATGGCCGCTAAA  45 0
RTCIAT899_CH09425 1903777 .. 1903804 +  -9.1  -2.76737   CGAGTATGGAATAGG        CATGTGGCGGG TGTTTT CGCGCCGCATG         ATTTGAAAATTGGTC  60 27
RTCIAT899_CH09430 1904465 .. 1904481 +  -7.9  -2.86728   AGCAGTTCCTCGATC              CGCTTGG GCA CCATGCG              TGTCGTGTGGGTCGT  55 314
RTCIAT899_CH09445 NONE
RTCIAT899_CH09450 NONE
RTCIAT899_CH09455 1908781 .. 1908796 +  -4.6  -2.92935   TTTGATTCAATGGTT              GCGCTC AGTC GAACGC               TAGTTTCCGGGTTAT  45 304
RTCIAT899_CH09470 1910668 .. 1910692 + -11.3  -3.62859   TGCGGGGAAGGTTAC          GCCGGCCGGGG CAG CCGTGGTCGGC          TTTGCCGGTTCTGCT  77 266
RTCIAT899_CH09480 1911764 .. 1911779 +  -3.2  -4.11394   CGCTGAAGAGCGCTC              CTGCGA GCTA TAGCAG               TTTTCGCCATCAAAT  58 13
RTCIAT899_CH09495 NONE
RTCIAT899_CH09500 1914178 .. 1914214 +  -2.9  -4.11484   CGGTGCGATCCCTTT   CCTGGTCGCGCCGGCA ATTTTG TGCCG-CGCAGTCATG    TTTTAACCGGTTCCA  57 502
RTCIAT899_CH09510 NONE
RTCIAT899_CH09515 1917481 .. 1917493 +  -5.5  -3.13906   AAACATGATAATTGC                GACGC TAA GTGTC                TGATTTTGGCTTGAG  50 99
RTCIAT899_CH09520 NONE
RTCIAT899_CH09525 NONE
        fghA 1920269 .. 1920284 +  -8.2  -3.01712   TTGGCCGTAGACATC              GCGGGG ACGG CCTCGC               TCTTACCAAAGGAGC  60 124
RTCIAT899_CH09535 1921112 .. 1921127 +  -4.6  -3.53012   GAGAGACGAATTTAT              TCGCCG GACC CGGCAA               TTTAACCGAGCCCGA  52 518
        gcvT NONE
        gcvH NONE
        gcvP 1931848 .. 1931875 +   -17  -4.72272   ACTTGTCTATGAAAG        CGCCGCGTGTCC GAAA GGATGCGCGGCG         TTTTTGGTGACGCCA 100 107
RTCIAT899_CH09600 1932614 .. 1932630 +  -3.5  -4.12902   CAGCCAGAAGGCCGA              CCGGCCC TTT GGCCCAG              TTTTCCAACTGCTTG  59 463
RTCIAT899_CH09645 1941405 .. 1941419 +  -5.6  -4.11692   ATTTTTTGTAGAACC               CGCTGC GAA GCAACG               TTTTCCGGATGCGTG  65 227
        tyrS 1946069 .. 1946088 + -16.4    -4.208   GCAGGAGAACGATGA            GCCGGCGC CTTC GCGCCGGC             TTTATCATTTTGGGG 100 52
RTCIAT899_CH09665 1946785 .. 1946811 +  -7.2  -3.04263   GGTTCAGGCCGTAGG         CGGGCATGAAGG TTC CCGTCATGTCCA         TCTTGCCACTGGCGT  52 267
RTCIAT899_CH09675 NONE
RTCIAT899_CH09680 1951840 .. 1951856 +    -5  -3.09327   CGCATCGCCGCGCTG              CGGGCG CAGGT CGACCG              TGTTACCTCGCGTCA  50 399
        rhlE 1954667 .. 1954679 +  -4.1  -3.01712   GATGCTGCGTCCAAC                TTCGG GAT CTGAA                TATTGGGCAAGCCCG  45 78
RTCIAT899_CH09700 1955286 .. 1955303 +  -4.1  -2.87229   TCGGAAGCGCTGGCA             TCGTCTG CCTT CAGAAGA              ATTTCGTCATCCACT  42 207
RTCIAT899_CH09740 1962057 .. 1962068 +  -3.6     -3.94   CGAACTGATGGCAAG                CCGT TCTG GCGG                 TTGTTTGCCCGTTGC  58 33
         rpe 1962838 .. 1962868 +  -6.6  -2.60901   ACCAACGTTCTAATA       GCGACGGGCCGGGC ACG GACCGTCGCCTCGC       ATTGCTTGGAAGTCT  51 45
RTCIAT899_CH09750 1963413 .. 1963431 +  -4.4  -3.64703   GCCCGTCTTTGTTAT             GGGGGCGC CGA GTTCTCCC             TTTCCGTCAGCCAAG  55 112
        purB 1964794 .. 1964816 + -14.1  -4.28067   TTTTGCTTTGCTTGA           GGCGGTGCG GCTGA CGCGCCGCC           TTTCTCTGTTGTTGG 100 57
RTCIAT899_CH09770 1967050 .. 1967066 +  -7.3  -3.85879   AGGAAGGAGGCGCAG              GCGGATT GTG AATTCGC              TTCTTATCCGTTATG  68 197
       purC1 NONE
        purS 1968159 .. 1968172 +  -3.1  -3.54488   AGAACTTCAGCATTT               CGATC GACT GATTG                TCTTCTTTCGCGAGC  49 15
        purQ NONE
RTCIAT899_CH09790 1969795 .. 1969807 +  -7.7  -3.01712   TAGCGTCCGGCCACA                CCATC GGC GATGG                TGTTCGGGGCGCCCG  56 359
RTCIAT899_CH09805 1972613 .. 1972623 +  -3.2  -3.28906   TTAGTTTCTAGTTTT                 CTGG TAA TCAG                 TTCGGTATTTGTTGC  45 193
RTCIAT899_CH09810 1973229 .. 1973249 +  -9.7  -3.16202   TTCGCTACATCTATG            CCGGCGT GTTGTGA ACGCCGG            TGATTTTCCTGTCGC  68 78
        purL NONE
RTCIAT899_CH09820 1975843 .. 1975871 +  -9.5  -3.10344   AGCGCCTGCGCCGCT        TCGCCGGAGTGGA AGC TCAGCTCCGGCAA        TCTCTTCGCTGAGAA  60 42
RTCIAT899_CH09835 1978251 .. 1978267 +  -7.2  -3.71794   CCGCCTGACCGGGCA              CCGGGC TCCTC GTCCGG              TTTCCATAGTTAAAT  65 33
RTCIAT899_CH09840 1979668 .. 1979696 +    -3  -3.07043   TCGCCGGCTCAGCCG       CCGGTGCAGTCCG GCTC CAGCC-GCATCGG        TCTTGGCATCGTGGA  43 78
RTCIAT899_CH09845 1981141 .. 1981156 +    -4  -4.07885   CCGTAACCCATAAAA              TGG-CGA GTA TCGGCCA              TTTTGCCCAGAACTC  59 242
RTCIAT899_CH09915 1994865 .. 1994892 + -15.7  -4.08394   GCCATCTGGATATGC        GAAAACCCGGC CTTAGT GCCGGGTTTTC         TTTTGCCCGGAATCT 100 49
RTCIAT899_CH09920 1995668 .. 1995691 +  -7.4  -3.82205   ATATCGGTCAAAAGC          TCCGT-CGGCG GCA CGTCGCGCGGA          TTGTTGATATATTCC  63 106
RTCIAT899_CH09940 NONE
RTCIAT899_CH09945 2002718 .. 2002752 + -15.8  -4.44046   AAGGCCCTAGTCACA    G-GAACGGCCGGGTG TGCGAT CGCCCGGCCGTTCTC     TTTCTTTCAAGTGAG 100 43
RTCIAT899_CH09960 2007975 .. 2008000 + -13.3  -4.96996   GCAGGAATCGAAAAA         GGCACGACGGA GATT TCCATCGTGCC          TTTGTTTTATTTAAG 100 60
RTCIAT899_CH09970 2009333 .. 2009346 +  -5.3  -3.33162   TGAAAGGGTTTCGTC               GTTTC TGTT GAAAC                TTATCCGATGACCTC  53 128
RTCIAT899_CH09980 NONE
RTCIAT899_CH09985 2013158 .. 2013176 +    -3  -3.66178   CGCAATCCTGCATGA             GGACCTGA AAA TCAGGCGC             TTTGGCATTCAGGAA  51 26
RTCIAT899_CH09990 2013831 .. 2013869 + -27.8  -2.94218   TTGAACGAGAATTCA   TAAAGACAAAGGCCGGCA ATT TGCCGGCCTTTGTCTTTA   TATATCATGGGGCCT 100 43
RTCIAT899_CH10010 2016753 .. 2016788 + -10.4  -4.68593   TGGTGATGCGCCCGC    CTTGCCTCGCTC-GCTG AAC CAGCTGAGCGGGGCATC    TTTTTGCGTGATGAG 100 362
RTCIAT899_CH10025 2024910 .. 2024931 + -15.9  -4.86621   GAGACGAACGCTCGA           TCCCCGGCA GAGA TGCCGGGGA            TTTTTGATTCAAGCT 100 54
RTCIAT899_CH10080 2038709 .. 2038734 + -15.5  -4.32436   GGCTGATAAGGAAAA         GGCCTGCACGGT TTC ACCG-GCAGGCC         TTTTGATCATCGTAT 100 35
RTCIAT899_CH10090 2041025 .. 2041038 +  -2.4  -4.12942   TCACCGTGCCGGTGC               GATC GTTCAG GATC                TTTTCGGAGATTTCG  57 178
RTCIAT899_CH10125 2049897 .. 2049935 +  -8.7  -2.83255   CTCGCAGCCGCCGTC   AGAACGGCACCGCGCTT CATGC AATCGCGGTGCCGCCCA   TCTCCTGGCTATTGT  60 49
RTCIAT899_CH10130 2051275 .. 2051287 +  -3.4  -2.75343   GTGGTATCGGCTCCA                TGCT CGATC AGCA                GTTTCGCCATCTCCA  41 479
RTCIAT899_CH10150 2055614 .. 2055633 +  -4.8  -2.87501   AGCATGCGCTCTGGC            CGCAGCGG CAAA CCGCCTCG             TGATGTTTGATACCC  46 39
RTCIAT899_CH10155 2056524 .. 2056537 +  -2.3  -4.07568   TAATCGCCTCTTCTC               CCTCG ATGA CGAGA                TTTTCGCGCGCGACG  57 292
         gph 2062098 .. 2062109 +  -2.2  -2.61548   GCTAAGATCTCTGTT                GGTT CAGC GACC                 TAGGTTGTGGTGGGC  38 45
RTCIAT899_CH10190 2063473 .. 2063504 +   -13  -4.85599   CCGTACGACAGGCAA      CAAAAAGGGCGACC AATG GGCCGCCCTTTTCG       TTTTTCTCCGCTGAA 100 73
        fumC 2067285 .. 2067312 +   -17  -2.74322   TGGCCCCTCACCCTA        GCCCTCTCCCCG CAGG CGGGGAGAGGGA         GTTTACCGCGTTAAA  91 92
RTCIAT899_CH10205 2069209 .. 2069226 + -14.1  -4.03413   TTGAGCATATCAAAA             GGGGCGC ATCG GCGCCCC              TTTCTGTAAAACCCT 100 56
RTCIAT899_CH10210 2070876 .. 2070891 +  -2.4  -3.29273   TTGTTGCCGCGCCAA              TCCGGC AGAT GCAGGG               TCTTCTCATCCTCCA  44 459
RTCIAT899_CH10225 2072825 .. 2072839 +  -8.5  -2.74514   CCGCCATATGCGATA               GCGGC GGCCG GCCGC               TGGTTACCCCTTTGA  53 192
        moaA NONE
RTCIAT899_CH10245 2076243 .. 2076299 + -19.5   -3.6269   CATCAGTGGCGATAG CAAGCTTCAATCGAAAAGCGCCGGACC ATT GGCCCGGCGCTTTTCGATTCATGATGG TCTTTCTATCGATGC 100 54
RTCIAT899_CH10255 NONE
        mobA NONE
        mobB 2081487 .. 2081500 +  -8.1  -4.07885   ACTGCTCGCCGTAGC               CCTGG GTGA CCAGG                TTTTCGGCAGGAATG  71 147
RTCIAT899_CH10275 2085083 .. 2085106 + -13.9  -5.27335   CCTGGGAAAAGACGA          CGGCGGAAG CTTGCC CTTCCGCCG           TTTTTGTTTGACAAC 100 55
RTCIAT899_CH10280 NONE
RTCIAT899_CH10285 2086833 .. 2086862 +  -3.7   -2.6528   CGCCTGGGCGCAGCC       TTGGCAGC-ACT CGCATGC AGTCGCTGCTAA       TACATTGATTTCTGT  42 56
RTCIAT899_CH10290 2087255 .. 2087265 +  -2.4  -3.04144   ATTCATCCTGCATTA                 GCCG CAT CGGG                 TCTTCGGCATCACCA  42 25
RTCIAT899_CH10295 2088215 .. 2088236 + -10.3  -3.90112   ACATCACATCGCAAA           TAGTTATCC ATTT GGATAACTA            TTTCCTTGCGCGGCG  80 49
RTCIAT899_CH10300 NONE
RTCIAT899_CH10305 NONE
RTCIAT899_CH10310 2090233 .. 2090250 +  -7.7  -3.28712   CTGACGAGCGCACGG             GCGAGCGC CAC GCGCT-GC             TTCTGCCCACCGGAA  59 435
RTCIAT899_CH10335 2095385 .. 2095402 +  -7.7  -3.14051   CTGAGAAGCGCTTCA             GCCATTC GATG GAGTGGC              TATTGGTGCGGATCG  57 342
RTCIAT899_CH10355 2098640 .. 2098656 +  -4.3  -2.71681   AGAGAACGGCAAAGG              AGCCGAG ATC CTTGGCG              TGCTTGCCGACGTTG  43 127
       cobS1 NONE
RTCIAT899_CH10375 NONE
RTCIAT899_CH10380 NONE
RTCIAT899_CH10385 2103410 .. 2103425 +  -4.6  -2.77523   GGCCAGCATATCGGC              CCATCG CGCG CGACGG               TAATCTTCATCAAGG  43 438
RTCIAT899_CH10420 2108664 .. 2108681 +  -3.3  -3.53012   TGAACGAAAGCTTAC             CACAGGG TGAT CTCGGTG              TTTCACGCAGGCGCC  49 64
RTCIAT899_CH10425 NONE
RTCIAT899_CH10430 NONE
RTCIAT899_CH10435 2111517 .. 2111533 +  -3.6  -2.63073   GCTCGTGCCCTAGCG              GTCGCG AAGCG CTCGAC              ATGTTATTCAACCGA  42 28
RTCIAT899_CH10440 2112775 .. 2112787 + -10.5  -3.00353   AGATGGAAGACTGTT                GGCGC GCC GCGCC                TGATTTGCTGCTTCT  68 161
RTCIAT899_CH10445 NONE
        uvrB 2117735 .. 2117755 +  -2.4  -4.37886   CGCGATTGTCGGATA            TCTGCCGC CCGGT GCTGCCGA            TTTTATGAAGGCTGA  62 47
RTCIAT899_CH10460 2118353 .. 2118373 +  -6.7  -4.07687   CCTGAGGCTCGGCCA            CGACGGCAG GAG CTGACGACG            TTTTAAGGGCGGCGT  70 10
RTCIAT899_CH10465 2119753 .. 2119764 +    -3  -4.40184   CGAACCTATGGCCTT                TCAA CCTA TTGA                 TTTCTCTTTCATTAA  64 204
       cspG1 2120277 .. 2120298 + -17.3  -5.04601   GATCAAGGTTTCGAA           CGGCGCGGT GCAA ACCGCGCCG            TTTTTCGTTTGTGAG 100 58
RTCIAT899_CH10480 NONE
RTCIAT899_CH10485 2123449 .. 2123460 +  -7.2  -3.16191   GTATAGGCGCTGAGC                GGCG CTTC CGCC                 TTGGTCAGGATATCG  54 407
RTCIAT899_CH10505 2126296 .. 2126312 + -10.1  -5.14563   ACATCGCCGAAGGAA              GCGGGCA TGC TGCTCGC              TTTTTTCATCACAAC 100 41
RTCIAT899_CH10510 2127889 .. 2127910 +  -3.6  -4.07568   TTCGATCTGCCGATA           GGAGGGGT AAAGAC ACTCCACC            TTTTCCCCGGCAAAG  59 346
RTCIAT899_CH10585 2141812 .. 2141833 +  -7.9  -3.93288   ATCCCGTCAGGATCT           GGCTCGGTC TCTA GAACGGGCC            TTTGATTACCTCCGA  71 12
RTCIAT899_CH10590 NONE
RTCIAT899_CH10595 2143217 .. 2143245 +  -4.4  -4.14257   TCCTTAGCATTGCGA        CCCGTCAGGACC ACATG GGTCATGTAGGG        TTTCTCGTTCTTGAG  61 152
RTCIAT899_CH10630 2153139 .. 2153160 +  -3.6  -4.07885   ATACTCTTTGGAGAC           GGCAGTGC TGTTGC GCACGGTC            TTTTCCGGCGCCATC  59 340
RTCIAT899_CH10640 2154689 .. 2154713 + -12.2  -3.57901   TCCAGCACACGAGAA         GCCGCC-ATGC GACA GCATCGGCGGC          TATATTTTTGCTCAA  81 60
RTCIAT899_CH10645 2156479 .. 2156506 + -14.9  -3.92324   ATCCATGTTGCTGAA        TCGGCGGC-GGC CTCGT GCCTGCCGCCGA        TTTCATATTCGCGCA 100 40
RTCIAT899_CH10650 NONE
RTCIAT899_CH10655 2158696 .. 2158713 + -10.5   -5.1383   CATCTCACGTGACAA             GCGCCCT TACC GGGGCGC              TTTTTCTGTCTTGTT 100 53
RTCIAT899_CH10660 2159919 .. 2159969 +  -5.3  -3.24232   CCTTGAGCCTTGTTC GGCACTGCCGACAGATACGCGCCGA ATA TCGGCGCGTAACGGGC-G-ATCGCC TATCTTTCACCGCCG  52 87
RTCIAT899_CH10695 2167533 .. 2167549 +  -6.5  -3.09803   ACTGAGCAGCCTTCT              TGACGGT ATG ACCGGCA              TCTTCCGTCGCATTG  54 106
RTCIAT899_CH10705 2168334 .. 2168349 +  -6.1  -3.56092   GCTGACTGTCTGAGT              GCGAC ATCCGC GTCGC               TTTCCAGCCTCATGC  57 28
RTCIAT899_CH10710 NONE
RTCIAT899_CH10715 NONE
RTCIAT899_CH10720 2170566 .. 2170591 +  -3.9  -3.29144   GTTCGATAGATAGAG         GCGGGCCAGG AGAGGAA CC-GGCCGGC         TTGTAACCCAGATCA  47 41
RTCIAT899_CH10725 NONE
RTCIAT899_CH10730 NONE
RTCIAT899_CH10735 2174016 .. 2174035 +   -15  -4.08394   CGAATAAAAATCGAC            TGGCCGCG TTCA CGCGGCCA             TTTTGCGCCCGATCT 100 34
RTCIAT899_CH10745 2175289 .. 2175305 +  -2.9  -3.02511   TATTCGTTTGATTGA              TGGATCT GGC AGGCCCA              TATTAAACCCGTGAC  43 26
RTCIAT899_CH10750 2175583 .. 2175611 +  -7.4  -4.17089   AGCATAACGGCTGAA        GGCGGCGTTC AACCCAAGC GAGCGTCGCC        TTTTGAACATTTACG  74 50
RTCIAT899_CH10755 2176916 .. 2176934 + -10.2  -3.04248   AATCGGATTATTGCA             GGCGGCTT ACT GGGCCGCC             TGTTGGGCCATCTTG  69 60
RTCIAT899_CH10785 2185850 .. 2185869 +  -4.2  -3.61517   TCCGGGACGTCGAAA            TCCG-CGCC GCC GGCGACGAA            TTGTTCCAGCGACAT  54 95
RTCIAT899_CH10805 2188916 .. 2188932 +  -4.3  -3.58533   GAAGCCATTGGCACA              TGGTCGC TTC GTGGCCG              TTTCAAAACTTCTCC  52 39
RTCIAT899_CH10810 NONE
RTCIAT899_CH10815 2189695 .. 2189711 +  -5.3  -3.53012   GACGAATTTTCTTTG              TTTTTTT GTC AAAAAAA              TTTCAGGGGCGGCAG  55 197
RTCIAT899_CH10860 2198656 .. 2198673 + -12.7  -3.17763   GTAAAAAAACGGCAG             TGGCGGC TTAG GCCGCCA              TTGCTCCGATCTCGC  83 37
RTCIAT899_CH10870 2200305 .. 2200317 +  -6.2  -3.41051   CAACCATTACCGTGA                CCGG AAAGA CCGG                TTCTGATGCGCGTCG  56 7
RTCIAT899_CH10875 2200691 .. 2200705 +  -2.8  -3.11222   GATCTATTTTGGCAA               GGCA CAATAGA TGCC               CTTTTCCGCTTAAAC  43 16
RTCIAT899_CH10880 2201675 .. 2201686 +  -7.2  -3.18582   CGAGTAGTTCATGTT                GGCG ATGC CGCC                 TTCATAGATCAGGTC  54 361
RTCIAT899_CH10895 2203963 .. 2203974 +  -5.8  -4.06786   CCGCCGCGCCTCATG                CAGC CGAA GCTG                 TTTCTGATATTGCAT  65 215
RTCIAT899_CH10905 2205975 .. 2205995 + -18.3  -4.90266   CAACTCATACGAAAA            GGGCAGCCG CTA CGGCTGCCC            TTTTTCATTCCTCGC 100 55
RTCIAT899_CH10920 2208761 .. 2208784 +  -4.6  -2.78384   AACAAATATCGGACA          TCGTCTCT ATACCTGA GGAGACGA           TGTCATGCCCGCCGC  45 68
RTCIAT899_CH10925 2209754 .. 2209764 +  -5.4  -2.80816   GGATAGACAGGCGCT                 TGGT TGA ACCA                 TATCCTCGATACACC  47 61
RTCIAT899_CH10930 2210351 .. 2210364 +  -2.3  -3.51232   CCAGTTGTTGCCGCG               GCGCA AAAA TTCGC                TTGATTTGGAAACGA  47 67
RTCIAT899_CH10935 NONE
RTCIAT899_CH10940 2212762 .. 2212781 +  -2.1  -3.59946   CAGCAGGGGCTCACA            TTC-CGGC CAATA GCCGCGGA            TTGTCTGCTTCCAGC  49 503
RTCIAT899_CH10955 2215043 .. 2215072 + -13.5    -4.371   ATAGCCCCTCACCCC       AGCCCTCTCCCCG CGTG CGGGGAGAGGGAG        TTTTCATGTCATACG 100 85
RTCIAT899_CH10970 2217841 .. 2217871 +  -3.9  -3.08032   CTGATCGGACCGGAA      AC-GGCGCGGCGGGA CCC TCCC-CAGCGCCAGA      TAGTTTTGAGGCGGA  45 37
RTCIAT899_CH10975 NONE
RTCIAT899_CH10980 2219424 .. 2219462 +  -3.1  -4.15044   TCTCCAGCGCAATCG  GCTTGC--CATGCGGCG TTGCCTC CGCCGCACGTTGCCAGC  TTTGTTGCAAAGCCA  62 282
RTCIAT899_CH11005 2222867 .. 2222883 +  -6.5  -3.25823   GAAGTTTCGTTCGAC              GGCCG GCGAGCG CGGCC              TTGGTGTAGACGCCG  54 174
RTCIAT899_CH11025 2228790 .. 2228812 +  -4.8  -3.72695   CCCTTCAGCATCGCG           GCGATCTG CATGACC CCGATCGC           TTTCATGACCGGCAT  57 169
        serB NONE
RTCIAT899_CH11040 2231216 .. 2231229 +  -3.7  -4.07568   CAACGACGACATCGC               CGGGC TTCA GCCCC                TTTTCCGCCGCCGCC  59 187
RTCIAT899_CH11075 2238069 .. 2238080 +  -7.2  -2.73875   ACTTCGGCCGCGATC                GCCG CATG CGGC                 TCATATTCGAGAACC  55 47
RTCIAT899_CH11085 2240159 .. 2240176 + -11.3   -4.8048   CAGTAGCCATTGCAG             GGGAAGC ATCC GCTTCCC              TTTTTCATGTCGGCA 100 35
RTCIAT899_CH11090 NONE
RTCIAT899_CH11095 2241076 .. 2241086 +  -6.8  -4.08692   GCGCCACCTCACGCC                 GCAG CCG CTGC                 TTTTCAAGCACATTG  68 384
RTCIAT899_CH11110 2247286 .. 2247338 + -11.2  -2.93393   CGGCCGGCTTCTGAT CAACGCAG-GACTGATTGCGCCGTC ATTC GGCGGCGTGATCGGTCTCAGCGAGG CTTTCTCCCATGCGC  71 27
RTCIAT899_CH11115 NONE
RTCIAT899_CH11120 NONE
RTCIAT899_CH11125 2249527 .. 2249539 +  -3.3  -3.68351   GATCGGCTCTCCCGC                GCCGA TCA TCGCC                TTTGCCTGCTGCAGC  51 174
RTCIAT899_CH11135 2250723 .. 2250746 + -13.8   -3.6761   GACGCGCAAAGCAAA          CGGCCGGATC GTGA GACCCGGCCG           TCTTTGTTGAAAAGG  89 44
RTCIAT899_CH11150 2255942 .. 2255952 +  -2.4  -3.02324   GATGCCGCTGCCGCC                 ACGC AAA GCGA                 TCTAATTTGCATAAA  42 216
RTCIAT899_CH11155 2256729 .. 2256740 +  -2.2   -4.7254   TCTTCCACGGAGCAA                C-CCG TCA CGGTG                TTTTTCATCGCGCAT  72 403
         gst 2257579 .. 2257605 +  -6.6  -3.85698   GAGACACTTCCAGTC         TCGCGATAGC ATCACTC GGTATCGCGA         TTTCTCGCAGGAGAC  65 72
RTCIAT899_CH11175 2259326 .. 2259342 +  -3.6  -2.87132   AAGCGGCTTCGGGAT              TCTGCG TTTCC CGCGGG              TGTCTCGGCAAGCCG  44 189
RTCIAT899_CH11180 2260737 .. 2260779 + -10.4  -3.14132   GCATAAGCATTTGCA AACCATCGCGCCTCGCCG CCTTCAT CGGCGAGGCGCAAAGGGC TTGATCCGAAACGCG  69 35
RTCIAT899_CH11185 2261514 .. 2261534 +    -4  -4.11394   ATGATGCAAGCTGTT            CCCGAT CAATGAAAT ATCGGG            TTTTGCGCGTGCAAT  60 77
RTCIAT899_CH11190 2262622 .. 2262633 +  -2.2  -3.86194   CTCCATGCTGGAAAC                GCTT TGAG AGGC                 TTTATAGCGGAGCTT  52 19
RTCIAT899_CH11205 2265936 .. 2265966 + -14.1  -3.81488   AGCATCGTCTCGTTT       TCGCTCTCTCAGG CACTC CTTGGGAGAGCGA       TTCTGTTTGGAGCAC 100 53
        panC NONE
        panB 2268039 .. 2268088 + -12.3  -2.62292   GGCAAAGTGCCGAGC GTC-TGGTCGAGC-TCTTCGGCG AAATAG CGCTGAAGACGCGCGACCATGGC TGCCTTCTCCTCCTT  68 199
RTCIAT899_CH11225 2269081 .. 2269107 +  -4.4  -3.20227   AGCCACGAGGTCTGA         CCATGTTCGATT TCA ATTCGCATATGG         TGTTGCTGATTGCGG  49 26
RTCIAT899_CH11230 2269398 .. 2269432 +  -7.2  -2.72745   ATAGGCGCTTGAGAC     GGACCTCATCCC CTTTTCAATTT GGAATGAGGTCC     ATATTTCTCAATGGC  55 29
RTCIAT899_CH11240 2271899 .. 2271918 +   -15  -4.76802   GAAAACCGATCTGAA            GGCGGTGC TTCG GCACCGCC             TTTCTTATTTTTGCA 100 165
RTCIAT899_CH11265 2275556 .. 2275588 + -17.8  -4.96848   TCGGCTCACAAAAGC      AGATCGCCCTGGAG CCGAA CTCCAGGGCGATCG      TTTTTGTATAACCGG 100 50
RTCIAT899_CH11285 2278358 .. 2278372 +  -2.8  -4.56597   GGCCTTCGCCTTGGC               TTCGTC GCG GGTGAA               TTTTTCCAGAGAGCC  66 233
RTCIAT899_CH11295 2281779 .. 2281794 +    -6  -2.73875   AAACGCATGATCCCG              CACGGC GTCC GCCGAG               TAATATTCCGGGCAA  46 377
RTCIAT899_CH11345 2293955 .. 2293974 +   -15  -5.11063   ATAACCAATTGAAAA            GGCCGGGT GAAA ACCCGGCC             TTTTTCTTGAATCAT 100 51
RTCIAT899_CH11410 2309013 .. 2309039 +  -2.3  -3.85698   CATTAACCGAGACCG        CCGGCA-ATTGC CACC GAAATATGCTGG         TTTGTGAAGAGCGGA  52 156
         pfp 2314128 .. 2314172 + -14.3  -3.10164   ACGGATCTGTGATCA ACGGACTGATGGACAATCAGG CGG CCCGATTGTCCATCAGGCGGG TTGACTGATCGCTAA  91 40
RTCIAT899_CH11440 2314958 .. 2314978 +  -2.5  -4.42765   TTGGCGGTCCTGTGG            CCGAATTGC ATC GAAATTAGG            TTTGGTTTTTTCGAA  62 115
RTCIAT899_CH11445 2316181 .. 2316202 + -10.1  -3.89822   AGATAGTTCTGAGAA           GCCGGCC TAGTTCGT GGCCGGC            TTTATCACATCCATG  76 49
RTCIAT899_CH11455 NONE
RTCIAT899_CH11460 2319786 .. 2319821 +  -5.5   -3.4268   GATATGGTGAATAAA   GTGGCAAGACC-TGCTG GCAA CGGTATGGTCT-GCCGC    TCTTTCGGATTCTCG  53 125
RTCIAT899_CH11465 2320740 .. 2320768 +  -3.2  -3.19463   AATCTTCTGTGAAAG       CGACCCTATTCTA TCAT TGGAA-AGGATCG        TTCATGGATCGTGAC  45 73
RTCIAT899_CH11470 2322041 .. 2322057 + -11.5  -5.43414   TATATCGATCCAAAA              GGCGGCT CCA GGCCGCC              TTTTTTGTATCTGCT 100 50
RTCIAT899_CH11475 NONE
RTCIAT899_CH11480 2323449 .. 2323472 + -12.4  -4.91109   TGCTTAATTAGAAAA          GCGCATGCCC GGCC GGACATGCGC           TTTTTATCGTCACGC 100 270
RTCIAT899_CH11505 NONE
RTCIAT899_CH11510 NONE
RTCIAT899_CH11515 NONE
RTCIAT899_CH11520 2333193 .. 2333213 +  -8.2  -3.02511   CTGCGAGCTTGGCTT            CGCTGGTC GCACG GGCCGGCG            TGTTGGCCGGATCGA  56 127
RTCIAT899_CH11540 2336517 .. 2336538 +  -7.1   -5.4659   ACATGCCTACAAAAA           GCCGCCAAG TTTC CCCGGCGGC            TTTTTCTTTGTCTTG 100 48
RTCIAT899_CH11570 2344392 .. 2344414 +  -3.5  -2.76404   GCGACTGTCATACTT           GTCGATT AGAAGCAAA AATCGAC           TGCGTTTTCAGTAAA  43 89
RTCIAT899_CH11575 2345636 .. 2345657 + -17.3  -4.03085   TTTGACCTGACATGA           CCTCCCCGC TTCG GCGGGGAGG            TTTCCGTTTTTCTGA 100 41
RTCIAT899_CH11580 NONE
RTCIAT899_CH11585 NONE
RTCIAT899_CH11590 2348486 .. 2348506 + -11.8  -5.41941   AAAATTATTCGCAGG            CGCCGGGT CAAAA GCCCGGCG            TTTTTCTTTGATTTC 100 70
RTCIAT899_CH11595 NONE
RTCIAT899_CH11600 2349832 .. 2349846 +    -7  -3.14931   GACGGATTTCGGCTG               GCGCAG GAT CCGCGC               TTCGTCGGCCGTCGG  54 192
RTCIAT899_CH11625 2353150 .. 2353165 +  -6.8  -3.06696   GCCCAGGTGCCCTGA              TCGCGC GACA GCGTGA               TATGTTCGGGGCGAA  52 298
RTCIAT899_CH11655 NONE
RTCIAT899_CH11660 2360517 .. 2360550 + -12.3  -3.00022   CCCAGAATCAAAAAA     GGCGCCACCCCAACC GAAT GGCTGAGGTGGCGCG      TGTATATGGAATCAA  75 66
RTCIAT899_CH11670 2366113 .. 2366128 +  -4.6  -3.42996   AGATGCGGCATATTC              CGCGCT TGAA AGCCCG               TTGTCCTCGATCGTC  52 236
RTCIAT899_CH11680 2367643 .. 2367656 +  -4.5  -5.41143   ATATGGCTACGCGCA               TTGCG AGAG CGCAG                TTTTTTTGAGAAGTG  90 73
RTCIAT899_CH11685 2368067 .. 2368088 +  -4.3  -4.20367   GCTCCTAGTGGCGCT           GGGGACTAC GCTC GGGGTCCTC            TTATTTGTTGCGCCG  62 69
RTCIAT899_CH11690 2368682 .. 2368732 +  -2.6  -3.14132   CTCTTCAAGGATCCC GGACCATTCATCCTGATGATACG CGGAGT CGTAG-ATCAGCGTGAAAGGGCC TTGATAGCCAGCCAA  43 172
RTCIAT899_CH11755 NONE
RTCIAT899_CH11760 2383649 .. 2383672 +  -4.6  -3.09933   AGTATTAGGCTATCG          TCCTCTGGTTG TCT TAGCC-GAGGA          TTACATGCCTTCAAC  47 40
RTCIAT899_CH11770 2385315 .. 2385359 +  -4.2  -3.05384   TCTTCACGCACGGCA GCGTGCGTCAATGTCGCTAGG CTAC CCGACCGCCATAGATG-ACGC TTCGATCGAAGACGA  47 168
RTCIAT899_CH11775 2385922 .. 2385932 +  -5.4  -3.72576   ATGGCTAGACTAAGC                 TCAG ATG CTGA                 TTTGGTGCGCGAAAC  58 356
RTCIAT899_CH11780 2386079 .. 2386101 +  -2.6  -3.90588   TTAATGCCATGTTGG           ACATTCGCGG TGA TCGCTAATGC           TTTGATTGACACCTA  52 6
RTCIAT899_CH11795 NONE
RTCIAT899_CH11800 2389793 .. 2389814 +  -2.2  -3.15324   TTTCATACGAGAGAA           TGCCGCGA AGCTAC TCGTGGGA            GTTTTAATGAAGCTG  42 125
RTCIAT899_CH11805 2390626 .. 2390653 + -13.4  -2.78712   GGCCTCCGGCACCTC        GGCCTCCGGGCT TAAA AGCTCGAAGGCC         TCGTTGCGTTCGCGC  73 288
RTCIAT899_CH11880 2400616 .. 2400631 +  -3.2  -4.19735   GTTCGGACCGCATCA              GTGCGA CGGC TCACAC               TTTCATTTTGGCGCG  58 86
RTCIAT899_CH11905 2403507 .. 2403517 +  -5.4  -3.06133   CATAAATTATGTTGA                 CATG CAT CATG                 TTGAATGGCAACTTC  50 72
RTCIAT899_CH11910 NONE
RTCIAT899_CH11915 2404821 .. 2404832 +  -5.8  -3.61517   CTGAGGCCGATCTCG                GCAG CGAT CTGC                 TTGTTGAGGAGACCT  57 250
RTCIAT899_CH11940 NONE
RTCIAT899_CH11945 2413660 .. 2413685 +  -5.3  -3.08464   CATCGGCAAGGAAAT         ACTCGTCCTCG ACGA CGAGGATGCGC          TTACCTGCGTAATAC  49 362
RTCIAT899_CH11995 2420666 .. 2420688 +  -6.3  -3.33261   TCCTTTTTGACGGTG           TTGGACGCT GTGAA AGTGTCCGA           TTCTCAAAATTGCGA  56 298
RTCIAT899_CH12015 2423685 .. 2423697 +  -4.7  -3.14463   CGTCTTTCTGGCTTC                GACGG TGA CCGAC                TTACTCCACCAAATT  48 334
RTCIAT899_CH12025 2424288 .. 2424303 +  -5.4  -4.66833   GAATCGGATGCAATC              GGC-GCT TTA AGCTGCC              TTTTTGGCCTTCGCG  73 149
RTCIAT899_CH12040 NONE
RTCIAT899_CH12045 2426344 .. 2426375 +   -10  -2.61264   GGGCGAGCATTGGGC      GCAGATCGGCGCCA GCTG TGGCGCGGCGCTGC       CTTCTGGATGGACCG  63 205
RTCIAT899_CH12060 NONE
RTCIAT899_CH12065 NONE
RTCIAT899_CH12070 NONE
RTCIAT899_CH12075 2430577 .. 2430587 +  -2.4  -3.76224   GCGCACGCGATATGG                 CCTG CTG CCGG                 TTTCGTGGATACCGA  50 130
RTCIAT899_CH12080 NONE
RTCIAT899_CH12085 2431963 .. 2431986 + -12.4  -4.36931   TTCCAAAGACAAAAA          GCCGCCAAAC ATGC GCTTGGCGGC           TTTTCGTATCGGTTA  93 204
RTCIAT899_CH12105 NONE
RTCIAT899_CH12110 2434146 .. 2434168 +  -9.1  -2.54193   GGATCGACGCACTCC           CGCCAAGCG CCGGC CGCTTTGCG           TCAATTGCGGTCATC  59 52
RTCIAT899_CH12115 2435469 .. 2435486 +  -5.5  -2.90392   CGGAAACGTCAACCT             CGAAGCC GGTC GTCTTCG              TGTACTTGGAACGTG  48 406
RTCIAT899_CH12210 2454072 .. 2454106 + -18.6  -3.97209   CTCAATCTCCAAAGG     CTGCATCCGGTCGCCA TGG TGGCGACCGGATGACG     TTTGCTGTTAGTTCG 100 62
RTCIAT899_CH12295 2468372 .. 2468382 +  -6.8  -4.72188   CACCCGCGCTTCATA                 CGTG CAA CACG                 TTTATTTTGGATTGA  81 269
RTCIAT899_CH12300 2468854 .. 2468871 + -12.7  -3.53224   GATCCGCTCCGGTTT             CCGCCTC GCGC GAGGCGG              TTTCCCGAACGGATG  85 45
RTCIAT899_CH12305 NONE
RTCIAT899_CH12310 2470462 .. 2470476 +  -3.4  -4.46212   GGCTCCGCCGCATCC               GCGCGT TCT GCGGGC               TTTTGTGCTGCAAAG  68 80
RTCIAT899_CH12330 2473475 .. 2473493 + -13.1  -4.93365   TCAGAGAACGAAAAA             CGGGCGC TCCAT GCGCCCG             TTTTTGCTTGTCAGC 100 122
RTCIAT899_CH12355 2476393 .. 2476427 +  -7.1  -3.18264   TTGGACAGTTCCGGC     GAACTGACGACGAAC TCTTC GTCCGTCAGCAGTTC     TTCATGGGTGAAAGC  54 458
RTCIAT899_CH12410 2489969 .. 2489987 + -11.6  -2.70932   CGCCTTCTTGCCGCG             ACGGCCCG TTT CGGGCCGA             TCCTTGCGGAAAAAC  65 343
RTCIAT899_CH12435 2494489 .. 2494519 + -19.9  -3.09823   GTCAGCAAAGCGCAA       GAAGGCAGGAGCT CCCCC AGCTCCTGCCTTC       TCTAATTTTGGGCCA 100 149
RTCIAT899_CH12440 2496070 .. 2496094 +  -4.1  -2.75727   TTAACTCCTTGAAGC          AGGCCGGCG ACGATCG CCCCGGCCA          CTTATGTCATGTTGC  43 472
        carA 2497584 .. 2497622 + -21.3  -3.94811   ACCACCCAATCGCAT  GAGAAAAGCCCCGGATTG AGAT CAATCCGGGGCTTT-CTC   TTTGTGCGTCATCTT 100 49
RTCIAT899_CH12475 2503640 .. 2503655 +    -4  -3.65224   ATCGGCCTGCAGTTC              GATG-CG CAC CGACATC              TTGTTGGCGTCCACT  51 333
RTCIAT899_CH12490 2505910 .. 2505937 +  -7.6  -4.56597   TTGCCCATAGCGCCC        CCGGCCGGTG ATCTCCCA CCCTGGCCGG         TTTTTGGCGCAACGA  83 137
        carB 2509632 .. 2509656 + -12.2  -4.22673   ATAACGGCTCTGGAT          GGTTCCGAAG TACCC CTTCGGGACC          TGTTTTCTTTTGTGT  93 201
RTCIAT899_CH12500 NONE
        lpcC 2511442 .. 2511452 +  -3.2  -3.86916   AGCTTCTCCATCAGC                 TCCT GCC GGGA                 TTTCGTATAATAGTG  56 195
        trxB NONE
RTCIAT899_CH12530 2515970 .. 2515994 +  -7.1   -5.9663   ACCTTCATACCTATA         GGGCC-CTGG TTCACT CCGGAGGCCC          TTTTTTTTGCTCTTT 100 231
RTCIAT899_CH12535 2516662 .. 2516676 +  -2.8  -3.01712   CCATGCTCACGTCCT               TCGC AACCGCC GCGA               TCTTCCCCAAAAAGC  43 65
RTCIAT899_CH12540 2517924 .. 2517949 + -14.8  -3.72141   TGATATCAGCAAGGA         GCCCTCGCAA CCTGGA TTGCGAGGGC          TTTCCATATCGGTGT  95 63
RTCIAT899_CH12550 NONE
RTCIAT899_CH12555 2520682 .. 2520712 +  -6.8  -3.02461   GCTGTTCCGCCGCCA      CGATCCG-GGCGG CCTCCA CCGCCTCGGAATG       TGTTGGAAACGCTTC  52 186
RTCIAT899_CH12565 2522227 .. 2522246 +   -15  -3.71378   CCTGGATACGAAAAA            GCCCGCCA TCTC TGGCGGGC             TTTCCATGTAAGCTA  95 122
RTCIAT899_CH12575 2525140 .. 2525177 +  -7.8  -3.97368   CCTGAGGATTTCGAG  GGCTGCAAGCTAGCGGGA AGCA TTCCGCTT-CTTGC-GCC   TTTCTGCCTTGCCGC  71 13
RTCIAT899_CH12580 2526174 .. 2526193 +  -8.6  -2.60032   CACGCTTTTAGCGGC            TTGGCG-GC ATG GCTCGCCAA            AATTTTTCGAACGAG  56 56
       cspG2 2526890 .. 2526907 + -12.7  -4.55491   AAATTCGAGTTGAGG             CCCGGCA GCAA TGCCGGG              TTTTGTCATTCAGTC 100 58
RTCIAT899_CH12590 2527425 .. 2527437 +  -3.3  -3.51708   ACGGCATGCGCCATT                TCTGC ACG GCCGA                TTGATTTCGGCCATA  49 9
RTCIAT899_CH12595 2528368 .. 2528391 +  -8.8  -2.74701   CCTTCAGAAAGCGGT          CCGGCGTGACG TTG CG-CACGCCGC          TGATGTTGAACATCT  57 382
RTCIAT899_CH12605 2529657 .. 2529668 +    -3  -3.63837   TGTCCAAACCGCGGA                TTTC CCCT GAAA                 TTATTGCGGAATTCT  51 97
RTCIAT899_CH12610 2530253 .. 2530277 +  -4.9  -4.60949   TTCGACGGTCGGATA          TGCATCGGCTT TCC AACCCGAGGCG          TTTGTTTCTCGTCTC  71 183
RTCIAT899_CH12615 NONE
RTCIAT899_CH12620 2531868 .. 2531890 +  -2.7   -3.6715   CGACCAGGATCACAC          GCCGTC-CAA CGGA TTGCGGTGGC           TTTCGCGTTGGATGC  51 89
RTCIAT899_CH12625 NONE
RTCIAT899_CH12630 2534024 .. 2534037 +  -5.2  -3.16191   AATGCACGGTGATCT               GCGC GGAGGA GCGC                TTGATGCCGATCTCC  48 246
         lgt 2537376 .. 2537386 +  -6.8  -3.57144   GATCCTTTCAGGAAC                 GGCT CCC AGCC                 TTTCAGGATCACGCA  60 60
RTCIAT899_CH12660 2538590 .. 2538602 +  -4.7  -3.48276   ATGATCGAACTGCTT                CGCCG CGG CTGCG                TTATCTCAAGCACGA  52 100
RTCIAT899_CH12665 NONE
RTCIAT899_CH12670 NONE
RTCIAT899_CH12675 NONE
RTCIAT899_CH12680 2542701 .. 2542717 +  -7.9  -3.05384   AACTGGCCTTCGCAC              GCAGGGG ATG CGCCTGC              TTCCATGCGAGCAGG  57 170
RTCIAT899_CH12700 2547904 .. 2547927 +   -16  -5.28176   GCCCGCACATTGAGA          CCCGCCG-CCC TCT GGGACGGCGGG          TTTTTTATGCCTAGA 100 54
RTCIAT899_CH12705 NONE
RTCIAT899_CH12710 NONE
         pth NONE
RTCIAT899_CH12720 2552730 .. 2552745 +    -4  -3.23447   CGCGGCGTATAATCG              TCGTTC ACGA GAATGA               TCTTGTAGAGCTTCG  45 261
        ychF 2554214 .. 2554225 +  -4.4  -3.17075   AAGCGCATAACGGTT                TTCC GTTC GGAA                 TTGCGTTAAAACAAA  49 79
RTCIAT899_CH12740 NONE
RTCIAT899_CH12745 2556608 .. 2556618 +  -6.8  -3.14132   GCACGGGCACGTCGA                 GCTC TTC GAGC                 TTCCTGCGGCCGCCG  54 117
RTCIAT899_CH12770 2561711 .. 2561732 +  -7.9  -3.06492   GTCAGCGTCGACAGG           CGGTGGGCG ATGG CGATCACCG            TCTTGCCATGCATCA  56 305
RTCIAT899_CH12780 NONE
RTCIAT899_CH12785 2565923 .. 2565951 + -10.9  -2.51702   GCGAGTCGATTCTCC        TGCGGCGTTGCTG CAC TGGCTGCGCCGCA        ATCTTGCTGATATTC  65 439
        hemF 2566947 .. 2566967 +  -3.9  -3.08046   GTTGGCCTTGAAGCG            TGTCGCATA AGC TGGGCGGCA            ATTTTGCGATCGCGG  45 30
RTCIAT899_CH12800 2567450 .. 2567465 +  -2.6  -3.43217   AGACTTGCCGGACAG              CG-GAAA CCT TTTCTCG              TTCGTTGCGTTTAGG  45 70
RTCIAT899_CH12805 2567785 .. 2567806 + -13.7  -3.14881   GGCCAAATCCTTGAG           TCGGGCGAG AAGG CTCGCCCGG            TTCATCAAAAAATTC  84 93
RTCIAT899_CH12825 NONE
RTCIAT899_CH12830 2572384 .. 2572405 +    -8   -2.7566   CGAGGGTCGCGTCAG           GAGGCCAGC CTTGA GC-GGCCTC           TCCTTCGCATTCGCT  57 12
RTCIAT899_CH12835 NONE
RTCIAT899_CH12840 NONE
RTCIAT899_CH12845 2577704 .. 2577730 + -11.6  -4.90266   CTGCAGAAGAAATTG         TCGCCTCGCT GACATCA AGCGGGGCGA         TTTTTCGTTGATAGC 100 14
RTCIAT899_CH12855 2579829 .. 2579842 +  -4.5  -3.21099   CCAGCTCCTCAAGCC               GGCGA TAGG TTGCC                TTCGTCGTGCCCGGC  48 88
RTCIAT899_CH12865 2581284 .. 2581301 +  -4.1   -4.4009   TTTTGCGTCGTAGCG             CGC-ATCG TTT CGGTAGCG             TTTTCTAAGATACGG  66 47
RTCIAT899_CH12870 NONE
RTCIAT899_CH12875 NONE
RTCIAT899_CH12880 2583513 .. 2583532 +  -2.1  -3.85698   AACCACCGCTGAAAA            GCAGTGCC GTGAA GG-GCTGC            TTTATCGGCCCAACC  52 228
RTCIAT899_CH12885 2585441 .. 2585464 + -18.2  -3.60098   ATGTGCAATAAAAGT          GGTCCCCTCG ATAA CGAGGGGACC           TTTCGAATCAGAGCT 100 40
RTCIAT899_CH12900 NONE
RTCIAT899_CH12905 NONE
RTCIAT899_CH12910 2591333 .. 2591374 + -10.7   -3.6502   TTGCAACTCCCGAGT GGCGAAGGCTGGCGGCGGA GATT TCTGCCGCCAGCATCGGGC  TTTCGATCGAAACTG  76 95
RTCIAT899_CH12920 2593124 .. 2593145 + -15.9  -4.86621   GCATCTAGCAGAAAA           GCCGCCATC TCCG GATGGCGGC            TTTTTCATTCAGCCT 100 55
        bluB 2596104 .. 2596118 +   -10  -3.55761   ACCGGCGGTTCCGCT               GATGCC GCC GGCATC               TTTGGCGCATCCATA  70 453
RTCIAT899_CH12965 2606157 .. 2606191 +  -5.1  -4.39386   TCGGGTGAGCCAAAC    CGACTGGATGGA-GCGA GCC TCGCCTCCATTTGG-CG    TTTTCGTGGTTTGCA  68 159
RTCIAT899_CH12980 2609520 .. 2609538 +  -3.8  -4.43309   CCGTGCCGGCGCGTC             ACAATCGG AAA TCGATTGA             TTTTCCTTGCAGTTG  65 106
RTCIAT899_CH12990 2611895 .. 2611905 +  -8.2  -3.51232   GCCTACTGGGTCTAC                 GCCC GCT GGGC                 TTCGTTTAGCGACCG  65 204
        choX 2616605 .. 2616623 + -13.1   -4.2772   ACACGGATGGATGGA             GGGGCGG CCAAA CCGCCCC             TTTCTCTTCCTTGAA 100 42
        choW NONE
        choV 2618657 .. 2618680 + -13.2  -2.56596   CAGCCACCGGCGAAA          GGAGTAGTCG CTCG CGACTGCTCC           TCAATTCATGGAGCA  78 19
RTCIAT899_CH13030 NONE
        nolR 2619977 .. 2620000 +   -14  -5.21709   GTTTTACTGCTTTAA          CTGGCAAATC CTTG GATTTGCCAG           TTTTTTCGTATCCGG 100 127
RTCIAT899_CH13040 NONE
RTCIAT899_CH13045 NONE
         ade NONE
RTCIAT899_CH13055 2624244 .. 2624262 +  -7.3  -3.05775   CTCTCGCCGATTTTC             GCGCGCG AAAGA CGCGGGC             ATTTTGAAGCATCAT  57 0
RTCIAT899_CH13060 2624595 .. 2624620 +  -5.3  -3.86202   TCGGCGGTGCCAAAT         CCTGGCATGGC GATC GTCTTGCCAAG          TTTGATGTCCTCCGG  62 100
RTCIAT899_CH13070 2628041 .. 2628089 +  -8.1  -2.86124   TCGATTAAAGAATAA TTGGGAACAGGCTCCCTCCCGG ACACAA CCGGGAGGGAGCC-GTCTAAGA TCATGTTTGGCTACG  59 26
RTCIAT899_CH13075 NONE
RTCIAT899_CH13080 NONE
RTCIAT899_CH13085 NONE
RTCIAT899_CH13090 2631907 .. 2631960 +  -8.7  -2.72991   TGGATCGGCCGTAAA TCAGCTCCAGCAAAAGTGGACGGCGG CTG CCGCCGTCCACCTT-GCCCCAGCCGC TGCTTGCGCGTATGC  60 27
RTCIAT899_CH13095 NONE
RTCIAT899_CH13100 2634526 .. 2634541 +    -9  -2.80994   CTTGATATGGATTAT              TTCCGG CTTG CCGGAA               TCTGCTCCCCTTACG  57 401
RTCIAT899_CH13110 2636325 .. 2636370 + -15.3  -3.34232   AGGAACGCGGCCTGA CCGGATGCGCCCTCCCCGACC ATCC GGTCGGGCAAGGTGCTTCAGG TTCGCTTCTTCTTGT  95 26
RTCIAT899_CH13130 2640483 .. 2640500 + -14.1  -4.13767   TTCTCCATTGAAAAA             GGCCCCG TTCC CGGGGCC              TTTTGCCGTCAACCA 100 174
RTCIAT899_CH13140 2643095 .. 2643126 + -14.4  -3.14132   ATCCGGCTCTCGGAA      GGGTCCGCCCAGGT GGAA ACCTCGGCGGGCTC       TTCGTGCAGCGAGCG  82 336
RTCIAT899_CH13190 NONE
       xdhA1 2653172 .. 2653185 +  -3.8   -2.8547   CCGTTAAAACGGGGA               GAGG GAACGA CCTC                TGTACTCTCGCCACT  43 88
       xdhB1 2655758 .. 2655814 +   -21  -3.16191   CTTGAAATTTGAGTA TGCCGTG-GTGTACCCCCCTCTGTCAC GACA GTGACAGAGGGGGGTACACACTCTCCG TTCATCACGATATCC 100 101
RTCIAT899_CH13210 2657470 .. 2657480 +  -2.4  -4.68384   CGGCCCGCTCCAAGC                 AGCC AAG GGCA                 TTTTATTAAATAACT  68 421
RTCIAT899_CH13220 NONE
       guaD1 NONE
RTCIAT899_CH13230 2661659 .. 2661675 +  -5.1  -4.07124   GCAAATCGTGAGAAA              CGAGG TTCTTTC CCTCG              TTTGTATCGGTGATC  61 325
RTCIAT899_CH13285 2668676 .. 2668687 +  -7.2  -3.60296   TTGCATCGGACTGCT                GCCC GTCA GGGC                 TTTGAAATGGACGTG  60 278
RTCIAT899_CH13295 2670672 .. 2670683 +  -7.2  -2.57132   GCGCCATGCGTCCAC                GGCC GCCT GGCC                 ATTCTCCACGACGAG  49 389
RTCIAT899_CH13305 2675093 .. 2675121 +    -3  -4.56597   CTGCGCAACGTCAGA        CTCGGCTTAGGC CAGGA GCCTAGCCTGTG        TTTTTGGGAAAGGGA  67 126
RTCIAT899_CH13310 2675505 .. 2675525 + -14.7  -4.07868   TTATCGGATCTCGGA            TGCCGCCGG ATT TCGGCGGCA            TTTCTGTACGTCTGA 100 74
RTCIAT899_CH13315 2677490 .. 2677507 + -14.1  -5.03314   CTTGATAAAGTTCTA             GGGGGCC GATT GGCCCCC              TTTTTTACGCCTCAC 100 36
RTCIAT899_CH13320 2678988 .. 2678998 +  -2.4   -3.4072   TGAGGTCGCCGGTCT                 GCAG GTG CCGC                 TTCTGGTAGAGCGTA  44 391
RTCIAT899_CH13330 NONE
RTCIAT899_CH13335 2682253 .. 2682263 +  -2.4  -3.31144   GCGCCGAAATCTCCG                 ACGG CTA CCGG                 TTCTACGAATAGGCG  43 3
RTCIAT899_CH13340 2683456 .. 2683480 +  -7.8  -3.36515   AACCGATACGATAGA         GCGCGGG-AGA AACC TCGGCCCGCGC          TATTTGCACCTGGAG  59 375
RTCIAT899_CH13350 2684684 .. 2684710 + -18.1  -3.14522   CAAGTATAATAGTAA         TCCCGGCACTC CTTGT GAGTGCCGGGA         TTGCATATGGCTTAA 100 32
RTCIAT899_CH13385 2694442 .. 2694465 +  -7.4   -3.0263   TTGCGCTCCTATGAA          GCTTGGCGTGG AGA CCACGC-ATGC          TGTTCAAGCAATCAT  57 77
RTCIAT899_CH13390 2695281 .. 2695304 +  -4.6   -4.1585   GGTTTCGCGTCCGGA          TTTCGGCT AAGTGGAG AGCCGGAA           TTTTCAGAATTGTGA  62 383
RTCIAT899_CH13400 2696447 .. 2696473 + -15.2  -5.63517   CGATCCTCCCAAAAG         TCCGCCGCGA TCTCCAT TCGCGGCGGA         TTTTTTCTTTGGCGC 100 65
RTCIAT899_CH13405 NONE
RTCIAT899_CH13410 2697215 .. 2697240 +  -4.5  -2.89055   ATAACAGCCTGACCG         TCATGCGCGCC GCCT GACGCGCTAGA          TCTATCAACAATTTC  46 9
RTCIAT899_CH13415 2698268 .. 2698302 + -15.7  -2.53271   GGCGGAAGGCCAGTA    CGTTGCG-GCGCCCGC CCTG GCGCGCGCTCGCAGCG     ATCTTGTCGAGCTCG  78 394
RTCIAT899_CH13425 2700590 .. 2700607 +  -5.5  -3.18264   GCTTCCCCGCAGTGT             GGTATGC CGCC GCATCCC              TTGGTCCGTCGGACG  52 153
RTCIAT899_CH13430 NONE
RTCIAT899_CH13435 2702900 .. 2702924 + -17.1  -3.28712   GACCGATGACACCGA          GGCCGCGCGCT CGA AGCCCGCGGCC          TTATCCCAACAAAAC 100 49
RTCIAT899_CH13455 2706046 .. 2706059 +  -3.7  -3.65351   TGACGGGGCGCACGA               GCCCG ATAA CGCGC                TTTGCCTGCAGATCG  51 165
RTCIAT899_CH13470 2708970 .. 2708992 + -14.9  -2.87146   TAGCTCGAAGCAAGG           TGACCCGCC TCTCC GGCGGGTCA           ATTCTTCTCGGCGCC  86 38
RTCIAT899_CH13485 2711518 .. 2711531 +  -3.8  -3.56541   GATCATTGCCTTTCA               GCCT GGCTTA AGGC                TTCTGTCGTAATAGT  51 122
RTCIAT899_CH13490 2712752 .. 2712766 +  -2.1  -3.41024   GATGATCCTGCACGG               CATTG CCTAT CAGTG               TGTTGTCTTCGACCA  44 388
RTCIAT899_CH13500 2714783 .. 2714795 +  -9.1  -3.09718   AAGACGCTTGGGTTC                GCGGA TCG TCCGC                TCATTTTCGACATTG  63 105
RTCIAT899_CH13510 2716440 .. 2716465 + -12.6  -3.69506   ACGCGATCAAAAAAG         GGCGCTTTGC AATACA GCGAAGCGCC          TATTGTTTTGCGCTG  86 71
RTCIAT899_CH13515 NONE
RTCIAT899_CH13520 NONE
RTCIAT899_CH13525 2718534 .. 2718563 +  -6.5  -3.29461   CGATGAGATTCACAA       CTCTCTGCAAGAGC TTG GAT-TTGCAGAGGG       TTGTCGCGACACTTA  56 35
RTCIAT899_CH13530 2719374 .. 2719400 + -12.3  -5.03145   GCATCGGCATAACCG         AATCGAGCGGC CACAA GCCGCTCGATA         TTTTTTGAGAGGTTA 100 60
RTCIAT899_CH13540 2721741 .. 2721752 +  -5.8  -2.87132   TAGCAGACACACGAA                CACC CGAA GGTG                 TCTATCAGGACGCGG  51 406
RTCIAT899_CH13550 2724137 .. 2724147 +  -2.4  -3.85539   TGAACTACATTTGAT                 GACC AAA GGAC                 TTTGATATGGATCTG  52 38
RTCIAT899_CH13555 2725252 .. 2725264 +  -3.3  -2.93858   TGTTCGTCTGCCGCC                TGCTC TAT GCGCA                TGTCTCGATCTCCTA  42 461
        olsE 2726424 .. 2726439 +  -8.2  -3.53444   GTGCCAATCGCGCGG              CGCGCC GACG GGTGCG               TTTACGGGCGCGTGG  65 58
RTCIAT899_CH13570 2729998 .. 2730024 + -13.6  -3.87815   CTGAATAAAACAAAA         CCCCGGCCTCCC TCA GAGAGACCGGGG         TTTATGAAGCTAACC  93 83
RTCIAT899_CH13640 NONE
RTCIAT899_CH13645 NONE
RTCIAT899_CH13650 2745471 .. 2745490 + -10.6  -3.78934   AACCCTCGAATTGCG            GCGGCCCC CAAT GGAGCCGC             TTGTTCTCGCCGGCA  76 98
RTCIAT899_CH13680 NONE
RTCIAT899_CH13685 NONE
RTCIAT899_CH13690 NONE
RTCIAT899_CH13695 NONE
RTCIAT899_CH13700 2752646 .. 2752659 +  -3.8  -2.87211   ATCGGAAACGATGTT               CCGA ACGCCG TCGG                TGTGTCAAAAGACCT  44 101
RTCIAT899_CH13705 NONE
RTCIAT899_CH13710 2753602 .. 2753624 + -12.7  -4.64334   GTTGTAACGATAAAA          GGCCCGGTCG ATAG CG-CCGGGCC           TTTTCTTCGAGCATT 100 128
RTCIAT899_CH13725 2755593 .. 2755619 +    -8  -3.57883   GAACAAAGAGCCTGA         CCGGGCGTTT GTGTGCG AAACGGCCGG         TTTACCGACTGTTAT  65 63
RTCIAT899_CH13730 2756759 .. 2756789 + -12.6  -3.62096   CAGCGACAAAATAAA       ACAGCCAGTGCG AGGGCGG CGCACTGGCTGC       TTTGCACTCATCGGG  86 50
RTCIAT899_CH13735 NONE
RTCIAT899_CH13740 2759917 .. 2759942 +   -14  -4.72272   TAACAGCATTCAAAA         GGCGGTCGCA GCTTGG TGCGGCCGCC          TTTTTCATAGCCAAG 100 41
RTCIAT899_CH13750 NONE
        hydA 2764028 .. 2764047 +  -3.4  -3.38812   GAATATAGAACATTT            CGCCTTCG CGGA CGATGACG             TGTTCTTCCAACCGG  47 307
RTCIAT899_CH13765 NONE
RTCIAT899_CH13770 2766189 .. 2766207 +  -8.9  -4.42325   TCCTTTCATTTCTCC             TGGCAAG GCATG CTTGCCA             TTCTTTTCTGTCTGT  85 43
RTCIAT899_CH13775 NONE
RTCIAT899_CH13780 2768351 .. 2768375 + -14.3  -5.81622   TCACAGAGTCTAAAA          CGCGCGAGG ATTGCGG CCTCGCGCG          TTTTTTTCATTTTGT 100 51
RTCIAT899_CH13785 NONE
RTCIAT899_CH13790 2773373 .. 2773396 + -13.8  -3.51708   ATATGGAAATAAAGA          CGGGGCGGCT CAAA GGCCGCCCTG           TTCCTTTAGGAAATC  89 55
        cysQ 2798715 .. 2798728 +  -3.7  -4.25104   TTCCCTGAAATAACA               GGGGC TTTT GCCCG                TTTTGCTCGGGCGCA  64 169
RTCIAT899_CH13920 2799184 .. 2799216 + -17.2  -4.00042   TAATTTGACTTTGTG      TTCGGGCCTCTTTT CTTGT GAAAGAGGCCCGAA      TTATTTGCTGGCGGG 100 61
RTCIAT899_CH13925 2799724 .. 2799764 + -20.5  -3.64703   CCCGAAAATGCAAAA  GCTGCGCATGGCCGGCC CCGTCAC GGCCAGTCATGCGCAGC  TTTCAGTACCGCCGC 100 78
RTCIAT899_CH13935 2801389 .. 2801408 + -13.6  -5.08601   GCCGACACACAGAAA            TCCCGCCT CTTC AGGCGGGA             TTTTTATTGGCCTCA 100 61
RTCIAT899_CH13955 2804193 .. 2804213 + -11.1  -4.41616   AGCAGCGCACGCCTT            GGCCCGC TTCAGTT GCGGGCC            TTTCTTTCCGCCAAT  93 66
RTCIAT899_CH13960 2805927 .. 2805941 +  -3.5  -3.37522   CGGCAAGCCCCGCAA               GCAGT TGAAT GCTGC               TTGATTGCCTGCGAT  47 402
RTCIAT899_CH13975 2808134 .. 2808174 +  -8.1  -3.05596   AGGATAATCCCAAGG  GCGATGTTCCGGCGAGACC TGC GGTCACGCCGAGATAACAC  TTGCGTGACCACATC  60 193
       rpoH1 2809278 .. 2809296 + -13.1  -4.24204   TGACCGATAAAGAAA             GGCGGGC CAAAA GCCCGCC             TTTTCCATATCCATA 100 62
        rkpK 2815888 .. 2815898 +    -4  -2.90496   AAACCCCTACGCACC                 TTTC CTC GAAA                 TGCTTTAAGCAAAGG  44 64
        lpsL NONE
RTCIAT899_CH14010 2818136 .. 2818152 +  -2.3  -3.05384   CGATCCCCGCAGGGC              CATTG GTCGTGA CAATG              TTCACTGCCGCCGCC  41 457
RTCIAT899_CH14040 2821248 .. 2821278 + -16.1   -3.4158   ATCGGCAAATAGCAG       GCCACGCGGCAGG AGCTG TCTGCCGCGCGGC       TTGGTCATTTTTCGA 100 29
RTCIAT899_CH14055 NONE
RTCIAT899_CH14060 2823902 .. 2823914 +  -7.7  -3.31144   GCGTTCGGTATCGAC                GAAGG CAG CCTTC                TTCTGCGCATAGGAA  59 187
RTCIAT899_CH14070 2825603 .. 2825631 +  -7.3  -2.78384   CTTTTTCGTCTTCAC        CGCCCAGGCAAGC CCG GCTTCGATGGGCG        TATGGTCCGGCCCGA  50 425
RTCIAT899_CH14085 NONE
RTCIAT899_CH14100 2833937 .. 2833953 +  -2.9  -3.28712   CACCAGCTCGAAGGC              TATGGCG CCG CGCGGTA              TTCTGAGCGCACGCA  44 464
RTCIAT899_CH14135 2845435 .. 2845454 +  -8.6   -3.2794   TGCGAAAGCCCATAT            CGG-TGCAG ACG CTGCAGCCG            TTGATCTGGCTGACG  59 380
RTCIAT899_CH14145 2846681 .. 2846693 +  -4.8  -3.08813   AAAGGCCGACGCATT                GCTG TAACC CAGC                TGTGTTGCAATCCGG  46 94
RTCIAT899_CH14155 2848467 .. 2848481 +  -5.6  -4.05788   GAAGAAGCCTGACCG               CGGCTC GGG GAGCCC               TTTCCTTTCGCCCGC  63 29
RTCIAT899_CH14160 NONE
RTCIAT899_CH14165 2850725 .. 2850758 +  -3.1  -3.63305   ATGCTTCGATCGATA     CGGAAAGCTGTTTTG AACG CAGAGTAGATTGCCG      TTTCGCAGTTGTATC  51 102
RTCIAT899_CH14170 2851661 .. 2851674 +  -2.5   -4.0616   GCAGGAAAGTAGACT               TTTTA AGCT TAAAA                TTTGTCCTTGAAATG  54 85
RTCIAT899_CH14175 NONE
RTCIAT899_CH14180 2853875 .. 2853888 +  -5.3  -3.31144   CCTATCCCCAAAGCG               TGATC AAAA GATCA                TTATCGAAATGAAAC  52 23
RTCIAT899_CH14185 2854859 .. 2854869 +  -4.6  -4.19704   CCATGGCGCTGAACT                 GGGT CTC GCCC                 TTTTCCGTCAGCTTC  65 239
RTCIAT899_CH14200 2858073 .. 2858119 + -13.8  -3.04144   CATTGATTGCATGAT TGGCTGGAAAGGTGGAGCCT TGAGGGC AGGCTCCTCCTTTCCGCTCA TCTTGGCGGTGAAAG  84 27
RTCIAT899_CH14205 NONE
RTCIAT899_CH14210 2860713 .. 2860741 +  -5.9  -3.64703   CTTGTTGACGAAGCG       GTCGAGCCGGGC AAACAG GCGCGGC-CGGC        TTTCGATCCAGAGAC  57 474
RTCIAT899_CH14225 2865965 .. 2866006 +  -2.7  -4.10566   GTAGCCTTGCCCCTC ACCCTAGCCCTCTCCCCGT TTTG ACGGGGAGAGGGGACGACC  TTTGTATCCTCGTCT  58 58
RTCIAT899_CH14230 NONE
RTCIAT899_CH14235 2868044 .. 2868062 +    -3  -3.51924   CCTCGATCCGGTGAT             GCGCCGAT GAC ATCTACGC             TTCTCTCCATAACAG  49 16
RTCIAT899_CH14240 2868918 .. 2868937 +  -6.4  -2.63596   TTTCGGAGGGCGGCC            GATGAGCG TTTC CGATCATC             TGCTGTCCGCTAAGG  49 21
RTCIAT899_CH14245 2869855 .. 2869870 +  -3.2  -2.60496   TATATGGAAAGGGAA              GACCCT ATGA AGGATC               CTGTTTCAGCAGCAA  40 110
RTCIAT899_CH14250 2870899 .. 2870921 +  -4.1  -3.30443   GAACGACGAGTTTGC          CGATGGTCCC GCGC GGCACC-TCG           TTCATCTCGTCATCG  47 500
RTCIAT899_CH14260 NONE
RTCIAT899_CH14265 NONE
RTCIAT899_CH14270 NONE
RTCIAT899_CH14275 NONE
RTCIAT899_CH14280 2878680 .. 2878717 +  -6.9  -3.53012   CGGCCGCGCCATCAC   CGGCATCGCCGCCTT TTCGAACT GAGGCGGCCGTGGCG    TTTAGAACCACCAGA  60 1
RTCIAT899_CH14285 NONE
RTCIAT899_CH14290 NONE
RTCIAT899_CH14295 2881599 .. 2881614 +  -3.2  -2.79796   GCATAGCGGCCGACG              GAAACG AGAT CGTTGC               TCTGCTGGCCTGACA  41 119
RTCIAT899_CH14315 2885734 .. 2885771 +  -3.3  -3.04398   CGTAATGCATTATCC   CGCGGGCGCTGTCGTTTC GAC GTCATGACAGC-CTGGCG   ATTTTCGAGAGAGAG  43 107
RTCIAT899_CH14320 NONE
RTCIAT899_CH14325 2887781 .. 2887801 + -11.1  -3.31144   CGCGAGAGAGGAAAC            GGCGATGGC GCG GCCATCCCC            TTCTCCCCGTCAAAA  74 117
RTCIAT899_CH14335 2889934 .. 2889956 +  -6.2  -3.14344   TGGTCTTGATCCTGC           GCTCGCGC TTCCATT GCTCGAGC           TTCGTCACGGCCATG  50 193
        ggt1 2892021 .. 2892050 + -15.1  -4.70659   GAAAACGACGACTCG       GACCGGTGCCA TCACCAAT TGGCACCGGTC        TTTTTGCCTATCGCA 100 58
RTCIAT899_CH14350 NONE
RTCIAT899_CH14355 2895510 .. 2895527 + -14.1  -4.62054   AGTTGAACGACAAAC             GCCCGCC ATCT GGCGGGC              TTTTGCTTTCATTGA 100 54
RTCIAT899_CH14365 2897594 .. 2897617 + -15.2  -3.34522   GCTGAAAATGCAGAA          GGCCCGCGGG CGTG CCGGCGGGCC           TTCCTTAAACGGTCT  95 36
RTCIAT899_CH14375 2898844 .. 2898860 +  -2.2  -2.55847   GGAAGAAGTCCTCTG              GAAGGA CCCGA TCCATC              GTTAATCTGCACATT  38 4
RTCIAT899_CH14380 2899960 .. 2899988 + -14.5  -4.07678   CGCGCTGAGCGGCGA        GGCGGCTGGGGTA TCT TGCCCGGGCCGCC        TTTGATGTTTTCGCA 100 61
RTCIAT899_CH14385 NONE
RTCIAT899_CH14390 2902015 .. 2902059 +  -7.1  -4.20868   ACCGGCTCGACCGCC GTTAGAGCATTTCCGCTTTTC TTC GAATCGCGAAAACGCTCTATC TTCTTGTTTTCACGC  70 21
RTCIAT899_CH14410 2905553 .. 2905595 + -12.8  -3.05384   ATCGCCCTCTTTCAT CCATTAGGGGACGGGACATG CCG CATGTCTCGTTATCGAATGG TTCAGTGAACCAGCC  81 46
RTCIAT899_CH14415 2906148 .. 2906166 +  -8.1  -3.31802   CGGGGCGGCTGCATA             TCCGGGA AGCGG TCCCGGG             TCTTGTCGTGCTTTA  64 138
RTCIAT899_CH14420 2906640 .. 2906656 + -10.1  -3.01261   AAATCGTCCGGCCCT              TCCCGCG GCA TGCGGGA              TCTCTCTGACATTAT  67 40
RTCIAT899_CH14425 2907078 .. 2907095 +  -9.9  -4.42062   CGAACGGAAAACCGC             GCACCTT TCCT AAGGTGC              TTTATTTCGGCAATC  88 105
RTCIAT899_CH14435 NONE
RTCIAT899_CH14440 2908689 .. 2908703 +  -3.5  -4.56597   ATGCAACCCCATACT               CCTCG TGCCT TGAGG               TTTTTACGCAAACCG  68 274
RTCIAT899_CH14470 NONE
RTCIAT899_CH14475 2913133 .. 2913158 +  -6.1  -3.91798   TGTTTCCGGCAGATT         GGTCGGGTGCA GGCA TGTATTCGGCC          TTTGATTGCGGCTTG  63 175
RTCIAT899_CH14485 2916445 .. 2916456 +  -2.2  -3.86524   AATGCAAAGTCAGCC                CTTG GAAA CGAG                 TTTCTGAAGCACTCT  52 416
RTCIAT899_CH14505 2919149 .. 2919174 +  -6.1  -3.21912   CGGAGACATGGGTAA         CACTTTTCGCT TTTT GGCGGGAGGTG          TTGATGCCTTGGAAA  54 327
RTCIAT899_CH14510 2920580 .. 2920599 +  -6.4  -2.90813   CTTATAAGGTGCGGT            TCGGCTTG GTGT CAAGCGGA             TGATTTGGAAAAATC  51 240
RTCIAT899_CH14555 NONE
RTCIAT899_CH14570 2931805 .. 2931826 + -11.5  -2.94561   AAACTGAAAACACAA           TGGCCGCCC GATA GGACGGCCA            TGCTATTTATTCGCA  71 57
RTCIAT899_CH14630 NONE
RTCIAT899_CH14635 NONE
RTCIAT899_CH14640 2947235 .. 2947245 +  -8.2  -3.55444   TTGGATATCGATGAT                 CCGC ATC GCGG                 TTTCCGGCGTCAGCC  65 198
RTCIAT899_CH14680 2953620 .. 2953649 +  -5.7  -3.61398   CATGGCCGCCAATGT       GGTGTCGAGATTG CCGG CAAGTTCGATGCC        TTCTTCCAGAAAGAG  57 408
RTCIAT899_CH14700 NONE
RTCIAT899_CH14705 2957220 .. 2957243 + -13.8  -4.43844   CCCATAACGCAAAAA          GCCGGCCGCA TCGC TGCAGCCGGC           TTTTCTGAATGATCG 100 34
RTCIAT899_CH14750 NONE
RTCIAT899_CH14760 NONE
RTCIAT899_CH14765 2969431 .. 2969462 + -21.7  -2.93723   CGGTCAATAATCTCC      GCGCGATTGCCGG TATCAT CCGGCAATCGCGC       TCTCATTCATGGCGG 100 31
RTCIAT899_CH14775 2972042 .. 2972072 +  -6.1  -3.91084   AGGGGAGGAGGAGTG      GCGTCAGCGCGG CGATAGAA CTGCGC-GGCGC       TTTCCTTGACAATCG  63 40
         tkt NONE
         gap 2976607 .. 2976648 + -13.9  -4.28994   CAGACCTGAGTGACA T-G-AATGCCGGCGGTGCG ATTTTC CGCGCCGCCGGCATTACTA TTTTGATGAATAGTG 100 49
RTCIAT899_CH14800 2978920 .. 2978956 + -19.5  -3.12999   AAAACCAGGAAAATA    GAACCGTTCGGCGATCC TAT GAAACGCCGAACGGTTC    TTGCGTCTCCGATCA 100 96
         pgk 2980255 .. 2980279 + -13.5  -5.04601   TCGAATGAATGAAGA          GTCCCGGTCGT GAT GCGGCCGGGGC          TTTTTGCTTTATGGC 100 54
RTCIAT899_CH14810 NONE
RTCIAT899_CH14815 2983172 .. 2983190 +   -11  -3.59979   TCAATAGCGAATACA             GGCAGGGT GCA ATCCTGCC             TTTCGGCTCCCAAAC  77 403
RTCIAT899_CH14825 NONE
RTCIAT899_CH14830 2984904 .. 2984926 +  -9.9  -5.35459   TCCCTGTTTTACCTT          GA-GAGCCGC TTTT GCGGCTCTTC           TTTTTTGTCCTGTAT 100 206
RTCIAT899_CH14835 2985652 .. 2985674 + -10.5  -5.07652   CGCAATGAATTTGAA           CCGGTCGCG CCTGA CGTGGCCGG           TTTTGTTTTGGGCAA 100 54
RTCIAT899_CH14840 2987865 .. 2987885 +  -8.2  -4.07568   CGTATCAACGCAAAA            AAGCCCGG CAAAA CCGGGCTC            TTTTCAAGCGGCAAA  77 52
RTCIAT899_CH14850 2990199 .. 2990210 +  -7.2  -2.57344   TTTTCGGCGTTATCC                CGCG CTGA CGCG                 ATTCTAGGAGACGTG  54 96
RTCIAT899_CH14855 2990453 .. 2990482 + -17.9  -4.82678   CTGCAAAGCCATTAA       CGGCCGGC-TGCCC TTT GGGCATGCCGGTCG       TTTTGATTTTTCTGA 100 60
RTCIAT899_CH14860 2991005 .. 2991017 +  -3.3  -3.05384   CGCGATTGCAGATGT                AGCCA TCA TGGCG                TTGGATGCCGGACGC  43 24
RTCIAT899_CH14865 2992515 .. 2992526 +  -2.2  -3.90291   GTAGCACCCAGTTGA                TCTC GGGC GGGA                 TTTCCTTGGCGAGGT  54 281
RTCIAT899_CH14895 2998299 .. 2998326 +  -4.8  -4.64861   GAGATGAGATTGCCG        CATGCAGCGCCTC CTC GAG-CGCGACATG        TTTCTTTTCGAGCGA  73 479
RTCIAT899_CH14905 NONE
        purE NONE
        purK 3000441 .. 3000457 + -10.8  -4.56133   TCCCCACCCTAAAGA              GCGCGC CCTGA GCGCGC              TTTTGATTGTTAAAG  95 98
        rpmJ 3000718 .. 3000751 +  -5.3  -5.05505   ATTTGTTTTGATCTT    CG-ACATTGGCGGGC TACTAT GCCCGCC-ATGCGCG     TTTTTGCTTTGTCAT  82 98
RTCIAT899_CH14925 3001374 .. 3001397 + -11.8  -3.54424   CACCTGATTTTCTGC          TGCGGTTTCC CGGC GGAAATCGCA           TTTGGAGGGATGAAA  81 34
RTCIAT899_CH14930 3002876 .. 3002900 +  -7.8   -3.1247   GCGAGGCGAGCGGCA         TGGTCTCGCCG CCAT CGGCGTG-CCA          TTGCGTGTCGCCGCT  56 387
RTCIAT899_CH14940 3004012 .. 3004028 +  -4.3  -3.01162   TATGCGCCTATCGCC              CGATGGC ATC GCTACCG              CTTCTTTCCTGGTGG  47 99
RTCIAT899_CH14945 NONE
RTCIAT899_CH14950 3004929 .. 3004939 +    -4  -4.07568   GAAGTGTCACGGAGA                 CAAT CTC ATTG                 TTTTAAAGGAAAGAC  60 39
RTCIAT899_CH14955 3006043 .. 3006056 +  -3.7  -3.08314   AAGCGCGCCGCCGCA               GGCGC GTTC GAGCC                ATTTTGCCCCTTCCG  43 92
RTCIAT899_CH14985 NONE
RTCIAT899_CH14990 3011289 .. 3011303 +  -5.7  -2.85351   AGCGATGTGCCCCTA               TCGGT GACCG ACCGA               TCTCATCTGCGACGG  50 130
RTCIAT899_CH14995 3011640 .. 3011659 +   -15  -4.85782   CTTGCGAGATGATCG            GGAGCCGG CTTG CCGGCTCC             TTTCTTTTTGAGCGC 100 57
RTCIAT899_CH15010 3014408 .. 3014426 +  -7.4  -2.70932   CTGGCCCTCAGCCAA             TGCGGCAA GGC TTGCGGCA             TAGTTGCCGCCACAC  50 475
RTCIAT899_CH15025 3017321 .. 3017335 +  -3.4  -3.73775   CTTCATAGGCAAGCA               CGCGGT CGA GCGGCG               TTTCGTCGCCATAGG  54 298
RTCIAT899_CH15055 NONE
        pabB NONE
RTCIAT899_CH15065 NONE
RTCIAT899_CH15070 3027675 .. 3027704 + -13.5  -3.35695   AGGCCTGAAGGCCTA       AGCGGCTGAAGGC GCTT GCCTGCAGCCGCA        TTCCGTTTATGTCAG  88 25
RTCIAT899_CH15075 3029426 .. 3029448 + -14.9  -5.06414   GATGCCAGACCCGAA           TGCCCGCAC AAGTC GTGCGGGCA           TTTTTGTTACGCAAG 100 58
RTCIAT899_CH15080 3029989 .. 3030001 +  -7.7  -3.25223   GGACGGATAAGGCAT                CATGC GCG GCATG                TTGATCCTCTACATG  59 51
RTCIAT899_CH15085 3030318 .. 3030331 +  -2.3  -4.07877   CCTGCGCCTGATCCG               GCGGG CCAT TTCGC                TTCTTTGTAAAATCC  56 30
RTCIAT899_CH15090 3032571 .. 3032596 + -21.9  -4.97957   GTCTCGCTTACTCCA         GCCGGTCCGGG CTTT CCCGGACCGGC          TTTTATTCTTATGTG 100 49
        hemH 3033996 .. 3034006 +  -8.2  -3.61398   AGGCACCGAGCCAGG                 GCCG CGG CGGC                 TTGTTGACCCGACCG  64 343
RTCIAT899_CH15105 NONE
RTCIAT899_CH15110 3036508 .. 3036528 +  -5.3    -3.922   GGTTGAGCACCGCCA            TGGCGCTCG TCG CCAGCGTCG            TTTCCTTCACCGTTT  62 136
RTCIAT899_CH15120 3039590 .. 3039607 +  -9.1  -4.10657   AAGAAGTTGGACGGA             GCCGTGCC CTT GGC-CGGC             TTTTCAACCATCTCC  76 507
RTCIAT899_CH15130 3041646 .. 3041662 + -10.9  -3.28712   GAATCCGGGATCGCC              GGACGAT GAA ATCGTCC              TTGTGCGGCCCGGAC  71 53
RTCIAT899_CH15135 3043026 .. 3043052 +   -10  -3.18264   CCCGACCGAGGTCTC         CGCGTCCAGTCG TGA CGGCCGGAGGCG         TTGATGCGTCCGGCG  68 164
RTCIAT899_CH15140 3043886 .. 3043908 + -17.8   -3.6215   CGTTAAAGGACAGGA           GCCGGGTTCA TCG TGAACCCGGC           TTTCCAATAGCTTCA 100 35
RTCIAT899_CH15145 3044742 .. 3044758 +  -7.3  -3.14132   ACGTCTTATAGTCCT              TGTCGTT GGC AACGACG              TTGGTCGAGCCGCGG  54 276
RTCIAT899_CH15165 3052672 .. 3052691 +  -6.4  -3.62616   AGTTCGATAGATCGT            CGCGATCGG ATG CCGGT-GCG            TTGTGTATAATCATC  60 136
RTCIAT899_CH15180 3054943 .. 3054971 + -14.5   -4.4261   ATAACACACAAAATG        AAAGCGGCGCCCC GAT GGAGCGCCGCTTC        TTTTGATCTTGGGAG 100 49
RTCIAT899_CH15195 3056914 .. 3056925 +  -5.8  -2.70017   TATGGAGAAGATAGC                GCAC CCAT GTGC                 CTCTTTACGTTTGGA  49 69
RTCIAT899_CH15200 3058088 .. 3058107 +  -4.2  -3.01712   CGGACGATCTTCATG            GTGTCGGGC CTT GCGCG-CAC            TGTTCGGAGAAAAGC  47 43
RTCIAT899_CH15205 3059623 .. 3059633 +  -8.2  -3.78934   CGATCATCCCCATGA                 CGGC GCG GCCG                 TTCTTCTGCAGGCCG  67 474
RTCIAT899_CH15225 3062163 .. 3062186 + -15.4  -5.10877   TTCGCTGAAAAGCAA          GGCCTTTCGA GAAA TCGAAAGGCC           TTTTTCATTTCTTAT 100 205
RTCIAT899_CH15245 3063890 .. 3063912 +  -2.6  -4.87786   GCAGAACCTGGGCTT           GGCGAAGC GTATTCG GCCTTGCC           TTTTTCTGCCGTTCC  75 217
RTCIAT899_CH15255 3065563 .. 3065575 +  -4.1  -5.00616   GGGAAAGCAGTCTTT                GCATG ACC TATGC                TTTTTTAAAGCAGAG  77 92
        noeJ 3067241 .. 3067262 + -15.1  -5.09259   GGTCGAGATTTCAAA           GCGGCGGGC GAAA GCTCGCCGC            TTTTGTTTTGGCATG 100 54
RTCIAT899_CH15265 NONE
RTCIAT899_CH15270 NONE
RTCIAT899_CH15275 NONE
RTCIAT899_CH15280 3075471 .. 3075506 + -23.6   -4.2828   CGATAGACTACAAAA    TAAAAGCCGCGCGATA CGAG TATCGCGCGGCTTTTA     TTTTGATCGATGCGC 100 71
        glgP 3078343 .. 3078360 +  -7.7  -3.34501   CTGCTGGCAGGCTGA             TGAGCGG ATCA TCGCTCA              TTGTGGCGATTGTCT  61 183
        glgB NONE
        glgC NONE
        glgA NONE
         pgm 3086119 .. 3086131 +  -4.1  -4.32804   CACCGACGGTGATTA                CCTGA GTT TTAGG                TTTTAAGTTCCTTCT  64 21
        glgX NONE
        nodN 3089188 .. 3089203 +  -6.1  -2.71011   CATGACCTTTGTATC              GCGCA TCACGC TGCGC               TGATTGAGGGCGAGT  50 352
RTCIAT899_CH15355 3095966 .. 3095992 + -15.8  -5.10877   TTCAGATGCATGTGT         GGCGGGGGCGAG TCG TTCGCCGCCGCC         TTTTTGATTTATTCT 100 60
RTCIAT899_CH15360 3096975 .. 3097000 + -10.4  -4.88918   CCGTAAAGATATCCA         GCCGCCGG-CG ATCCC TGCCCGGCGGC         TTTTCTTTGCCCTGG 100 55
RTCIAT899_CH15365 3098298 .. 3098314 +  -2.1  -3.30771   GCAAGGAAAATTACC              GAGCCCT AAC ATGGCGC              TTCTGGAGCATGTAG  43 141
RTCIAT899_CH15370 3100502 .. 3100519 +  -5.5  -3.21747   GAATTCCGAATTGAT             GTCCTCG AGCT CGAAGAC              TTCATCATAGGGTAC  50 438
RTCIAT899_CH15405 3108801 .. 3108817 +  -8.7  -2.51471   CCCTGCGGCCCAAGC              GCCGAGA GAA TTTCGGC              ATTGATAACCTTGTG  56 333
RTCIAT899_CH15425 NONE
RTCIAT899_CH15430 NONE
RTCIAT899_CH15435 NONE
RTCIAT899_CH15440 3115131 .. 3115143 +  -6.3  -3.61178   GGCCGAGACGATGGA                TCAGA ATA TCTGA                TTTCACCTGAATGAA  57 13
RTCIAT899_CH15445 NONE
RTCIAT899_CH15450 3118490 .. 3118515 + -12.5  -3.47227   GCAGCCAAATAAAAA         GGCCTCCGTCC GGAC GGGCGGAAGCC          TTATGATACTTCGGG  85 29
RTCIAT899_CH15465 NONE
RTCIAT899_CH15470 NONE
RTCIAT899_CH15475 3123887 .. 3123897 +  -4.6  -4.79352   TGCAATTGCCGCCGA                 GCGG GTT TCGC                 TTTTCTTGTCCGTCA  78 253
RTCIAT899_CH15495 NONE
RTCIAT899_CH15500 3127400 .. 3127438 +  -8.7  -2.71712   ATCGGCGCGTCCGGG  GCTCGGTCGCCGGCGGAC AGGC GACCGCTG-CGCCCAAGC   GTTTCGAGCGCGAGC  57 410
RTCIAT899_CH15510 NONE
RTCIAT899_CH15515 3130273 .. 3130299 +  -7.3  -3.24925   TGTTCTTCGTCCGGC        GCGG-TTGCCGT CTGT ACCGCAAGCCGC         TTGCTGATCTCGGCT  54 116
RTCIAT899_CH15535 3135636 .. 3135652 +  -3.5  -4.08692   CCTGGCTGCACCAGA              GCATGCC CTT GGCCGGC              TTTTCCGAACCCTTG  59 467
RTCIAT899_CH15565 NONE
RTCIAT899_CH15570 3143173 .. 3143196 +  -4.6  -3.64488   CGCCTCCCGAAGATG          TCGATCAAACG TAA CGATTGA-CGA          TGTTTTCCAGCAGTT  55 12
RTCIAT899_CH15600 3151120 .. 3151138 +  -3.7  -2.86343   AGGATGATCAGGCCT             CTCCTGC CGTCC GCGGGCG             TGTAGTAATTCAACT  44 39
RTCIAT899_CH15605 3152095 .. 3152123 + -13.2  -3.29144   AAGAACTGGAAACAA       G-GCTGCCGCCAT GAAA ATGGCGGCGGCGC        TTGTACGAACCATGA  87 58
RTCIAT899_CH15610 3152972 .. 3152995 +  -8.8  -3.16881   CCACTAATCGGGAAA          GCCGC-CCCCA TGA TGAGGTGCGGC          TTCATCACATCGATC  65 34
        gltX NONE
        lysS 3156800 .. 3156845 +  -5.9  -3.16564   ATTATGACGGATAAA GAGATGCCAGCCGCAGACGAT AGCG AGCATCAGCGGCTGGCCGATC TTGCTGAGATCGGCG  54 75
RTCIAT899_CH15630 3157258 .. 3157299 +  -4.3  -4.09511   ATTGCCGGTCGATTT CGGCTCCGGCAGCGGCGG CTTGGCA TCGCGGCTCTCGG-GCTG TTTTGCGGCCGTCTT  61 214
RTCIAT899_CH15640 3159086 .. 3159108 +  -2.1  -2.98447   CATGCATATGCACTA          G-GA-ATCGGA ATT TCCGATATCGC          CTTTCTGATAAATGA  40 60
RTCIAT899_CH15645 3160372 .. 3160391 +  -4.2  -3.28712   ATATCGGCGTGATCG            GGGGCAGA TAAC TCTTCCTC             TTCTCCCCAGCGGGG  49 15
RTCIAT899_CH15650 NONE
RTCIAT899_CH15655 NONE
RTCIAT899_CH15660 NONE
RTCIAT899_CH15665 NONE
RTCIAT899_CH15670 3165123 .. 3165133 +  -8.2  -2.90496   CCTGGCCGTCATGGC                 CGGC AAC GCCG                 TCGTTTGACGACGGG  59 7
RTCIAT899_CH15695 3168891 .. 3168902 +  -4.4  -3.06183   AAGTGCGGAGCGGTT                TTCC GTCC GGAA                 TTGCATGAAAATACA  47 108
RTCIAT899_CH15700 3170088 .. 3170137 +  -9.3  -3.21099   TGCCGAGATCCTTGG CGAAGGCGCGGATGCCTTCGGAGA GCT TCTCGGTAGCCATC-GCATCTTCG TTCATCATCCAGCGG  61 315
RTCIAT899_CH15710 3171380 .. 3171408 +    -3  -2.78816   TGTCATAGAATATCG        GCAGCAGAAGAG CCGAT CTCGCCTGCTCC        TGTCATCCGCCATCA  41 52
RTCIAT899_CH15715 3172535 .. 3172555 + -12.6  -3.32294   TGTCACTTCGTGACA            TCTCCCCC ACAAA GGGGGAGA            TTGTAGGGAGTTTGC  84 80
         nth 3175378 .. 3175427 +  -3.7  -4.09739   GGGAACTCTTCATCG CCGCGACGAT-CGG-C-AT-CGCCG TTCC CGGCGTATCGCCCGGATAGTCGCGC TTTTCCACCACTTCG  59 375
RTCIAT899_CH15740 3177037 .. 3177054 +  -8.4  -2.96979   CGGAAGCTGCGATTG             CCGTGC CAAGCA GCACGG              TCTCGTTCATCTTCG  55 210
RTCIAT899_CH15790 NONE
RTCIAT899_CH15795 3188962 .. 3188979 +  -2.6  -2.60615   CAAAGACCGGCAAAG             GGTGCG AGCAAG TGCGCC              ATGTTTCCAGCGGGT  38 84
RTCIAT899_CH15800 NONE
RTCIAT899_CH15805 3190691 .. 3190714 +  -4.4  -2.72144   AGAAAGCCGGAAAAA          CTTACTGCGC AAGA GCGCGGTCCG           CTTTCAGCAACATCA  45 87
RTCIAT899_CH15810 3191879 .. 3191889 +  -3.2  -3.15861   AGAGCACGAGGCGGT                 TTCC GAA GGGA                 TTCATGCAAATCGTC  43 163
RTCIAT899_CH15815 3193799 .. 3193821 +  -3.3  -2.70932   GCGGGCTGAGGAACT           GCGCCACGA AACTC TCGTCGCGA           TAATTGACCCAGAGA  41 429
RTCIAT899_CH15890 NONE
RTCIAT899_CH15895 NONE
RTCIAT899_CH15900 3209423 .. 3209446 +  -5.8  -3.85698   TTCGGCTCCACCGGC          GCATCCGGCG TCGG CGCCAGGAGC           TTTCTGAGCGAGGCG  62 93
RTCIAT899_CH15910 NONE
RTCIAT899_CH15915 3212456 .. 3212476 + -12.6   -2.7317   GTCCCCTTCGGGACA            TCTCCCCC ACATG GGGGGAGA            TCGTTCGGAGTATGT  76 101
RTCIAT899_CH15920 3213399 .. 3213413 +  -5.6  -3.86194   ACCGTCCGTTATAGG               CTCGTC CAA GGCGGG               TTTCTCGACACCATT  61 167
RTCIAT899_CH15925 3214240 .. 3214270 + -21.4  -4.41348   TCTGAACGGTTCAAA       CAAATATCCCGGCT CGA AGCCGGGATATTTG       TTTCTTTCAGGCGCC 100 36
RTCIAT899_CH15955 NONE
RTCIAT899_CH15960 3222909 .. 3222941 + -16.4  -4.90778   TCTCCAATGATGAAA     GGCCCGATGGCAGCA GATC TGC-GCTATCGGGCC      TTTTCTTTAGATGGC 100 78
RTCIAT899_CH15995 NONE
RTCIAT899_CH16000 NONE
RTCIAT899_CH16005 NONE
RTCIAT899_CH16010 3231386 .. 3231409 +  -2.4  -4.18018   ACCGGTCTCAAAGGC          TGATCGGTTC CCTA GAACGGATGA           TTTTAGATCGAAGCG  56 23
RTCIAT899_CH16015 3232820 .. 3232844 + -14.3   -4.4078   GATCTGAACAATCCG          CGCCGCCTC CCAACAA GAGGCGGCG          TTTTCATTCGCAGGC 100 52
RTCIAT899_CH16025 3235079 .. 3235092 +  -3.8  -3.32698   CCCCGCACGCGGGGC               GAGG GAATGA CCTC                TGTTCTCTCGCATGA  49 91
RTCIAT899_CH16035 3239016 .. 3239032 +  -3.6  -3.14132   AGCACCAGCGCATCG              GCACGA TCGAT TCGCGC              TTGCTCGGCAACGAC  45 521
RTCIAT899_CH16045 3239988 .. 3240000 +  -6.9  -2.58714   CCAGTCAGTTCGATT                GCGCT GCC GGCGC                TGCCTTGATCTGCCC  51 86
RTCIAT899_CH16065 NONE
RTCIAT899_CH16070 3245045 .. 3245059 +  -2.8  -2.94099   GCGTGATGATCGTCG               TGCAAG CAT CTTGAA               TATGTCGTAGACAGG  42 110
RTCIAT899_CH16075 3247709 .. 3247739 + -16.2  -3.58726   CTGATTTCTAACGAA       CCGGAAAGCGAGGT CAT GCCTGGCTTTCCGG       TTGTCTGTCGGACCG 100 37
RTCIAT899_CH16085 3249923 .. 3249938 + -11.8  -3.21395   TTCAGAAGCGACAAA              GGCCGC GTTA GCGGCC               TATTGTAACACGGCT  78 407
RTCIAT899_CH16120 3258807 .. 3258840 +  -3.1   -3.5511   ATCCGGAATTTGACC     CG-AAAGGATCTGTTC GGC GAGCGGATCCTGGACG     TATTTCTGGATCACC  49 217
        ubiG 3270241 .. 3270256 +  -3.2  -3.95584   TCGCCCTGCGTGGCA              GCGTTG AGCG CAACGA               TTTCCTTGATACGAG  56 88
RTCIAT899_CH16190 3274570 .. 3274583 +  -3.7  -4.36592   CCGCTTTTCTTCGAT               GCGCG AAAA CGCTC                TATTTTTTCTTACGC  64 331
RTCIAT899_CH16205 3275696 .. 3275710 +  -5.6   -3.2614   CGCCGCCCGAAGGCA               GCGCTG TCT CAGCCC               TTGCTATAGAAGCTA  52 52
        secA 3282148 .. 3282166 + -12.4  -5.27335   TAGCAACGAACAGAA             TGCCGCCT TTG GGGCGGCA             TTTTTGTTTGCAACG 100 55
RTCIAT899_CH16240 NONE
RTCIAT899_CH16245 3286217 .. 3286229 +  -3.3  -2.52896   CAGCAGCCAGTCATT                GGCAA ATT TCGCC                TCCGTTGCCGCCTCG  40 426
RTCIAT899_CH16255 3288755 .. 3288786 + -14.4  -3.73224   CTGGCCCCTCACCCC      AACCCTCTCCCCGT TTTG ACGGGGAGAGGGGG       TTTCCTGCCCAATCC  95 93
RTCIAT899_CH16265 3290042 .. 3290058 +  -7.9  -3.53012   GGCAAAGGCCCTGCG              CCGGCGA TCC TCGGCGG              TTTCGCCGGGAACGA  62 270
RTCIAT899_CH16275 3292187 .. 3292203 +  -5.1  -3.53444   GAATTGGTAGACGCG              CTCGACT CAA AATCGAG              TTTCGAAAGAAGTGC  55 196
RTCIAT899_CH16285 3294089 .. 3294112 +  -5.2   -4.9138   TCAGTCAGTTCCGGA          CGTCGCTCGA CGAT TTTAGCGGCG           TTTTCTTTAGATCGT  80 7
RTCIAT899_CH16290 NONE
RTCIAT899_CH16295 3295660 .. 3295680 + -12.6  -3.16191   GTCGCTGTCGCGACA            TCTCCCCC ACAAG GGGGGAGA            TTGGTGGGAGTATGC  83 97
RTCIAT899_CH16310 3298148 .. 3298204 +  -4.2  -3.72576   CATCCTTTCCGCAGC TACTTCG-GCGGCCGC-GCGGCTCGCCA CCT TGCCGAACAGCAGCCGCCGCACGCGGAA TTTCATCAGCGCCGC  57 74
RTCIAT899_CH16320 3299988 .. 3299998 +  -2.4  -3.11222   AGCAATCCCACGAAA                 GGGC AAA GCGC                 CTTTTCCGCTTGAGA  42 41
RTCIAT899_CH16325 3300236 .. 3300258 +  -2.5  -4.28375   GCTGACCGGCGGCGG           CCGCCCGGC CTAGA GCCGGATGA           TTTTAGGTCTGTTCG  60 13
RTCIAT899_CH16330 3301044 .. 3301057 +  -2.4  -4.12911   GGGCGCACATATTGA               CGTT GACGTA AACG                TTATTTATGCCTTTC  56 60
RTCIAT899_CH16335 NONE
RTCIAT899_CH16340 3302978 .. 3303005 + -16.4  -3.75153   ATAGGTCTATCAATC        TTTGCCGGGCTA GAAA TGGCCCGGCAAA         TTTGAGTTAAAAGCA 100 92
RTCIAT899_CH16345 3304122 .. 3304132 +  -4.6  -3.31792   TCAATACGTTGAACA                 CGCC CAT GGTG                 TTGTCGCGGTAGTAG  49 213
        argH NONE
RTCIAT899_CH16360 NONE
        lysA 3307738 .. 3307750 +  -3.3  -2.90496   GGCTTGAGGGATAAT                CGGCT TCA ATCCG                TGATTTCGGGGGGAC  42 27
RTCIAT899_CH16370 3310737 .. 3310750 +  -2.3  -3.14211   GCCATCGAAAAAGTT               GCCTG TCTT CATGC                TTCGTAAAGGGGGAT  42 49
RTCIAT899_CH16375 3311688 .. 3311700 +  -4.8  -3.22298   ACAGGCGATCAAGCT                CCGT GGTTA ACGG                TTCGTCATCGCTGGA  49 519
        ftsE NONE
RTCIAT899_CH16400 3315109 .. 3315124 +  -2.5  -3.61178   GCATGGATCTGACGA              CTCGC AAGACC GTGAG               TTTGCAGTCGCTGCG  47 114
RTCIAT899_CH16405 3315922 .. 3315935 +  -9.5  -2.52464   GCAAACCTCCGGATG               CCGGC GCAA GCCGG                TGCATTGGAAAAGCC  63 135
        plsC 3316992 .. 3317040 +  -4.5  -4.11216   GCGATCGACGACATA GACGACGGCGGTCACGCGC-CGCC CGTC GGCGAGC-CG-GATCGGCAGCGTC TTTTCCAGATAGACG  62 260
RTCIAT899_CH16420 3318393 .. 3318409 +  -2.9  -3.38812   TCTGAGAGTCTATCC              TTTGCGG ATC CCGGAGA              TATTCTTCACAAAGA  47 36
        gloB NONE
RTCIAT899_CH16450 3323086 .. 3323096 +  -6.8  -3.53012   TTGAAAAAGCTGTGT                 GCTG TGT CAGC                 TTTACACGGGGAGAG  60 102
RTCIAT899_CH16455 3324306 .. 3324343 +  -8.3  -3.51034   TCAAGAAATAAATGG   C-AGCGGGGACGGCGGAG CTA TTCCGCCGCTTCCGCCCG   TGTTTGCTCTGCGTC  65 30
RTCIAT899_CH16470 3326687 .. 3326715 +  -8.8  -4.70659   TCATACCGGCTAAGA        GGCTTGCACGGA TCATC TCCGGACAAGCC        TTTTTCCATGTCCGG  93 63
RTCIAT899_CH16475 3327462 .. 3327498 +    -8   -2.6063   ATTTCCTGACAAGGA   GGATGGC-AGCGGCC GAGAACCA GGCCGCTCGCCACTC    TCAATTCTGGCTGAC  56 85
RTCIAT899_CH16500 3333019 .. 3333038 + -10.8  -3.60098   ATGCGGTTCTTTTCC            CGCTTCAT GACG ATGAAGCG             TTTCCCATAAAAGGT  73 111
RTCIAT899_CH16520 NONE
RTCIAT899_CH16525 NONE
        accA 3338345 .. 3338377 + -17.1  -3.31248   AGTGATCGCGAAAAA      CGGGAATGAGGCCAA ACC TTGGCCACATTTCCG      TTATCGAAGCTATTA 100 56
RTCIAT899_CH16535 NONE
RTCIAT899_CH16540 3340125 .. 3340144 +  -4.2  -3.40403   GAACCTAAAACTTCA            TCC-CCGGC ACG GCCAGCGGA            TTGTCCTGCAGCGCC  51 66
RTCIAT899_CH16555 3344035 .. 3344045 +  -4.6  -4.30161   GACGCAAAAAGGCTT                 GGCT TCC GGCC                 TTTGCTTTTGTATGG  66 112
RTCIAT899_CH16565 3346419 .. 3346437 +  -3.8  -4.11216   GGCGGATTCCAGCGC             CGAGCG TCTGGCC TGCTCG             TTTTCCAGATAGAGC  59 348
         dxr 3348078 .. 3348105 +  -9.8  -2.63073   GCCATCCGAATGCAG        CG-GCGTCGGCGT GAT GCGCAGACGCTCG        GTCTTCTTCGGCACC  60 225
RTCIAT899_CH16600 3353786 .. 3353806 + -13.3   -5.7946   ATCGAATTTCGGAGA            TCCCGGGCT ACA AGTCCGGGA            TTTTTTTATTCGGGC 100 51
RTCIAT899_CH16605 3355979 .. 3356012 +  -3.2  -3.53343   TGCCGGCATCGGTCA    GGCCTTCTGACAGACT GTAT AGT-TGTC-GCGGGCC     TTTCAGCACACGGTT  49 16
RTCIAT899_CH16610 3360480 .. 3360502 +  -2.6  -4.40963   TCGGTCGGCTCTTCA           TGGCCTCGAT CTG ATCCATGCCG           TTGTTTTTACCCCGT  62 267
        rocF 3361568 .. 3361579 +  -4.4  -2.74196   CCGCGTAAGACTATC                CAGT CGAA ACTG                 CTTGTATAGATTTAG  45 84
RTCIAT899_CH16620 3362174 .. 3362192 + -13.1  -5.68438   AGTCTTTCCAAAGAA             CCGCCGC TCTCT GCGGCGG             TTTTTTATTTCCTCA 100 52
RTCIAT899_CH16625 3364146 .. 3364169 + -13.8   -4.3534   GCTGAAAATCAAGAA          GCCGCCCCGA AACT TCGGAGCGGC           TTTTCGTCATTCGGA 100 53
RTCIAT899_CH16675 NONE
RTCIAT899_CH16680 3377023 .. 3377063 +  -7.5  -4.76087   AGCCACGTCCACGCC  TAGAGCGGTTCAGTTTTTC CCG GAATCTCTGCGCCGCTCTA  TTTCTTTATTGTCTC  86 23
RTCIAT899_CH16690 3378311 .. 3378345 + -18.6  -3.48593   GCGGGAGATCGGTCC     GACGCCCGGGCCCG GCACCAA TGGGTCCGGGCGTC     TTGTCTCCAAGGATC 100 85
RTCIAT899_CH16695 3380061 .. 3380082 +  -5.9  -2.85351   GCTCTTCGATGATAT           CGCGGAATTC GTA GAGTT-CGCG           TGTCATCTCGCCGCC  48 451
RTCIAT899_CH16715 3384707 .. 3384723 +  -9.3  -2.72591   ACATCAACAAAAAAA              GCGGCCC AGA GGACCGC              CTTCATTTCACTCAT  60 215
RTCIAT899_CH16760 3395568 .. 3395589 +  -8.7  -3.55444   GCGTTCCGAATGGGT           GACGATCCA GATC TGGCTCGTC            TTTGCGGCCTCAGCA  66 190
RTCIAT899_CH16775 3398789 .. 3398830 +  -3.6  -2.87132   CAGAATCATGTGTCA GCATGCCTCCCGAAAGCCG CTTTC CGGCGTTAGCG-GTCATGC TCTCTGCGAACGGAA  44 92
RTCIAT899_CH16780 3399934 .. 3399947 +  -3.8  -3.66874   GCTTTACGGTGACGG               CGGT AAACTG ACCG                TTTGCATCCGCTTGC  53 15
RTCIAT899_CH16885 3423309 .. 3423319 +  -4.6  -4.08692   CGCCAGAGAAATCTA                 CGGT GAC GCCG                 TTTTCAGCAGCATTG  61 310
        hemC NONE
        hemD NONE
RTCIAT899_CH16925 NONE
RTCIAT899_CH16930 3431313 .. 3431324 +  -2.2  -3.71645   GCAATTCCGGCAACA                G-CGC GCA GCGGC                TTTGCCTCTGGAATT  50 42
RTCIAT899_CH16935 NONE
RTCIAT899_CH16940 3433034 .. 3433047 +  -6.7  -2.52464   GCTCGACCATGAACG               GCGAT GACG ATCGC                TGAATTGGCAACCAG  48 449
RTCIAT899_CH16955 NONE
RTCIAT899_CH16960 3435341 .. 3435353 +  -2.6  -4.56133   AACCTTATTACGAAG                GGCT GATCA GGCC                TTTTCCTTCTTGGCG  65 20
RTCIAT899_CH16985 3440065 .. 3440097 +    -7   -4.2828   CCAAGCAAAGATCAG      CTCAGCCGCCAAAG CTTAC TTTTGGCGACTGAC      TTTTGCTGCGTACCG  74 44
RTCIAT899_CH17000 3443595 .. 3443623 + -15.9  -3.59262   CTTTCCACATAAGAA        AGCCCGCCTCCGG CGA CCGGAAGCGGGCC        TTTCAGCATCTCGAA 100 53
RTCIAT899_CH17010 NONE
RTCIAT899_CH17015 3447098 .. 3447108 +  -6.8  -3.59979   GTCTTGCGCATGCGC                 TCGG ATT CCGA                 TTTCAGCTGACCGCA  60 510
RTCIAT899_CH17060 NONE
RTCIAT899_CH17065 3455412 .. 3455424 +  -7.7  -2.75844   GCCGCCAAAACAGCC                CGATG TTA CATCG                ATTTAACATCGGGCC  55 62
RTCIAT899_CH17070 3456337 .. 3456352 + -11.8  -5.72053   AATGAGATACGAAAA              GGCGGC TTCA GCCGCC               TTTTTTGTTTGCTTG 100 52
RTCIAT899_CH17075 3457298 .. 3457356 +  -4.5  -4.31164   ATGCGACCATAGATC CAGAGAATCGCATCCAGCTCCCGGCGATG AAA CGTCACCGGCAGC-GGGTCCT-TGCTCTG TTTGTATTCTCTGAG  68 337
        ccmA NONE
        ccmB NONE
        ccmC NONE
        ccmD NONE
RTCIAT899_CH17115 3465111 .. 3465131 +  -2.4  -3.23711   TCCGGCCATTGAGAA            GGCGCGGG GGAAA TCGGCGTC            TTGATCCCTTCTCCC  43 1
RTCIAT899_CH17150 3472099 .. 3472117 +  -3.7  -4.56597   CGAAGGGCAGGATCG             CGAGGCG AAAGC CGCCATG             TTTTTGCCGGGCAGC  68 466
         ffh NONE
RTCIAT899_CH17170 NONE
RTCIAT899_CH17175 3476627 .. 3476652 + -16.9  -5.64421   GGCATTGATTGAAAG         CGGGTGGCATG GCGA CATGCCGCCCG          TTTTTTGTTTCCCAT 100 49
        rimM NONE
        trmD 3478235 .. 3478246 +  -2.2  -2.61831   GTCAATGGATGCGCC                CTTG CAGG CAGG                 CCTTTTTCAAGTGCA  38 155
RTCIAT899_CH17190 3479175 .. 3479207 +  -3.3  -3.64103   GGATCGTCACGTGAG     CGCGGATGCTGCCG AAATTA CGGCAGCGAA-GCG      TTTGGCCTCTACATG  51 27
RTCIAT899_CH17195 3480050 .. 3480067 + -10.5   -4.8048   ATCGGGAAATTCGAA             GGCGGCC CTCG GGTCGCC              TTTTTGCTGTCCGGC 100 57
RTCIAT899_CH17200 NONE
RTCIAT899_CH17205 3482056 .. 3482074 +  -9.5  -3.05935   GCAGGTGTGATCGGT             GCGGCTG GATGA CGGCCGC             TTCGATACAGCCTGT  67 31
RTCIAT899_CH17210 NONE
        leuC 3483761 .. 3483780 + -16.4  -4.61873   GGCATGAATGACAAA            GGGCGGCC TGAT GGCCGCCC             TTTTCGTTTGTCGGG 100 51
RTCIAT899_CH17225 3485726 .. 3485750 +  -8.5  -3.57792   GTTCGCAATTCCGGA          CCGGTATCGTC ACC GACAACACCGG          TTTCGAAGTCGATCG  64 462
RTCIAT899_CH17235 3488010 .. 3488030 +  -5.3  -3.53224   AGACTGTAGGATAAT            GCCGAGC CCTGCCA GCGCGGC            TTTCAGCAACGCCTC  55 260
RTCIAT899_CH17245 3489469 .. 3489496 + -15.6   -3.6608   TCCAGGATGACAAAA        GCGGCTCGGAGT CTTC ACTCCGAGCCTC         TTTGCATAAACTGAT 100 54
RTCIAT899_CH17260 NONE
RTCIAT899_CH17265 3492405 .. 3492441 + -12.3  -2.66964   AAATACAAAAGGATA    GAGCGTTTTCGCGATTC AAA GAAAAGCGCAAACGCTC    TGATATCCTCAATCC  72 86
RTCIAT899_CH17300 3501396 .. 3501408 +  -4.8   -4.2349   CTCTAAAGCGGAAAC                CCTC TATTC GAGG                TTTTGCATCTCGGCA  66 64
RTCIAT899_CH17310 3503858 .. 3503870 +  -4.8  -4.18506   AAGGCGGCCCTTTTC                CGAG ATCAG CTCG                TTCTTTTCCCGATCG  65 114
RTCIAT899_CH17340 3507734 .. 3507751 +  -9.1  -2.69151   GTCTTCGGCAGGCCC             CTTGCCG CCTG CGGCAGG              TGATATATAGCGGCG  57 83
RTCIAT899_CH17350 3509677 .. 3509695 +  -8.9  -3.30771   TTCAACGTCAAGTTT             TGAAGCG CTCTT CGCTTCA             TTCTCGGCGATATAG  65 23
RTCIAT899_CH17415 3521363 .. 3521379 + -12.3  -2.91997   TCTAGGCTGCCGTAA              TGCCGCT CGC AGCGGCA              TCCTTGTGTATCGCC  75 85
RTCIAT899_CH17425 3523789 .. 3523801 +  -6.3  -3.21593   CCATCACCCGGCAAA                TCAAG GCA CTTGA                TCTTCTAAACCGATC  54 43
RTCIAT899_CH17430 NONE
RTCIAT899_CH17435 3525003 .. 3525034 +  -3.7  -2.70932   AAATCGCCGGGAAAC      GGCATCTCCAGGCC CACGA GGT-TGGGGATGAC      TACTTCAACAACCCA  43 144
RTCIAT899_CH17440 3526946 .. 3526956 +  -8.2  -3.96148   GTGTGCCCGAGCGCC                 GGCG GAG CGCC                 TTTGTCGTCGAAAAG  69 482
RTCIAT899_CH17460 3531281 .. 3531302 + -11.5  -3.06315   GGAGAGGGCTAGGGT           GAGGGGCAG CCGC CTGCCCCGC            TATTAACCCTCTTGC  72 198
RTCIAT899_CH17465 3532805 .. 3532823 +  -5.8  -2.61144   CCTGCTTGCGCATCA             GAGCGCCG AAG CCGCGCCC             ATATTTGCGGGCTCG  46 168
RTCIAT899_CH17475 NONE
RTCIAT899_CH17480 NONE
RTCIAT899_CH17485 NONE
RTCIAT899_CH17490 NONE
RTCIAT899_CH17515 3544097 .. 3544109 +  -6.3  -3.34894   AAAAAGACTGTTGGT                TGAGT TAC ACTCA                TATTTAACGCACATT  56 96
RTCIAT899_CH17520 3544798 .. 3544814 +  -6.5   -2.7566   GCCAGTCACGCGATC              GGCGC TGAGATT GCGCC              TCATTGCAATTGGCT  52 151
RTCIAT899_CH17525 3545272 .. 3545301 +  -7.9   -5.1286   CCGGATATGAAATGA       TGTCGGTATGGCT CCCA GGTCATATCGGCA        TTTTTCTCATTTTTC  91 63
RTCIAT899_CH17535 NONE
RTCIAT899_CH17540 3550695 .. 3550739 +  -4.5  -4.83615   TCGTCTTGATTTGCC AAATTTGTCATCAATGATT AATATGC AATCATTGATGACAGGGTA TTTTTATGGCCAGTA  77 104
RTCIAT899_CH17545 3550976 .. 3550992 +  -6.5  -2.57211   CCAATCCGCCCGGTC              GATCTCG ATC CGTGATC              ATTCTCGACACGAAT  51 11
RTCIAT899_CH17550 NONE
RTCIAT899_CH17575 3563273 .. 3563286 +  -2.3   -2.5758   GTCACGCCTCATAGG               TCGGC CGGT GACGA                AATTTTGTAATATCC  38 134
RTCIAT899_CH17585 NONE
RTCIAT899_CH17590 3565925 .. 3565940 +    -9  -3.21747   GCGGATCGGGCCGGT              CACCGA CGGA TCGGTG               TTGATCGTGCCGTCC  61 269
RTCIAT899_CH17610 3569691 .. 3569734 + -13.1  -4.57073   AGTCGGCAAGCCCGG CGCCGTCGGGCGAAACGGCG ATCTC CACCGTTTC-CCCGCCGCCG TTTTTCCAGGGCATG 100 510
        hutF NONE
        hutC 3576749 .. 3576767 +    -6  -3.28924   CAGTCTAACGGTAAA             CGTTAAGC AAT GCTTGATG             TTCTGCGAAAAAATG  54 271
RTCIAT899_CH17645 NONE
RTCIAT899_CH17650 3579295 .. 3579311 +  -2.1  -3.22884   GCCCTAGTTTGGGCC              CACCGCA ATC TGCAGGG              TTCCTCACTTCATGG  43 131
RTCIAT899_CH17655 NONE
RTCIAT899_CH17660 3582063 .. 3582093 + -16.8  -2.78015   ATGGCCCCTCACCCC       AACCCTCTCCCCGC ATC GCGGGGAGAGGGGG       CTTTACGGTGATTAA  90 116
RTCIAT899_CH17665 3583116 .. 3583148 +  -6.4   -2.6381   CGGCCAGCGTCATCG     CTTCGATCTG-GTCA TGGG TGACGTAGATCGACG      TGGTCTGCACCTTCT  49 504
RTCIAT899_CH17690 3588383 .. 3588398 +    -6  -4.05788   CCCTGGGGAACAACG              GGACCG GCAC CGGCCC               TTTGATTTCGCGGGA  65 5
RTCIAT899_CH17695 NONE
RTCIAT899_CH17700 3590437 .. 3590449 +  -2.6   -4.7373   ACGCCACAAGCTCTT                GTGC TGCTT GCGC                TTTTTGCTGCCATGG  68 252
RTCIAT899_CH17705 3591631 .. 3591643 +  -2.6  -4.86385   GGTGACGAAAAAGGA                CCGG AACCA TCGG                TTTATTTTTCGCGAT  72 138
        glpS NONE
        glpT NONE
        glpP NONE
        glpQ NONE
RTCIAT899_CH17735 3596468 .. 3596480 +  -2.6  -2.62184   GTGGTCTACGCCGCC                GGCG TCTTC CGTC                TGGTCTGACGCGGAA  38 5
        glpV 3598370 .. 3598395 + -16.9  -4.72986   ATTACGCGAAATGGG         TGCCGGGGCTC GAAA GAGCTCCGGCA          TTTTTCGTCGGGATG 100 50
RTCIAT899_CH17745 3599472 .. 3599492 + -12.6  -2.72379   TGTCACTTCGTGACA            TCTCCCCC ACATG GGGGGAGA            TCGTTGGGAGCTTGC  76 80
RTCIAT899_CH17755 NONE
RTCIAT899_CH17760 3604084 .. 3604109 +  -8.4  -2.70932   GGCCATCGCCTTTGC         CATGCTGCCGT CGCGC AC-GCAGCATG         TGCTTCCGGACGCAC  57 63
RTCIAT899_CH17765 3605183 .. 3605196 +  -2.3  -4.08216   GTGGATCCGCCAAAA               GCTCG GTTT CGAAC                TTTTGGAAAGGATCA  56 140
RTCIAT899_CH17770 3605855 .. 3605870 +  -6.1  -2.62184   GATCTACGCTCAGCA              GCTGC CGAGCT GCAGC               TGATCTCAAAACGGG  49 7
RTCIAT899_CH17790 NONE
RTCIAT899_CH17795 NONE
RTCIAT899_CH17800 NONE
RTCIAT899_CH17805 NONE
RTCIAT899_CH17810 NONE
RTCIAT899_CH17815 3616893 .. 3616908 +  -4.6  -2.74792   GTCCTCGCCTTCCTG              CACCGC CGAC GCCGTG               ATTTCGGCATCGTGG  43 308
         efp 3625868 .. 3625904 + -13.8  -4.11484   AGCTCATAGCTTGCA    TGAAAAACGCCTCGTC CTTGC GACGGGGCGTTTTGCG    TTTTGGGCGGTTGAA 100 47
RTCIAT899_CH17865 NONE
RTCIAT899_CH17870 3629385 .. 3629411 + -10.8  -5.88197   AGGGCCGCGTGCGGA         CCGGTAGCGATT CAT GATCGCGGCCGG         TTTTTTTGTATTTGG 100 179
        metA NONE
RTCIAT899_CH17880 3631543 .. 3631558 +  -4.6  -2.81089   GCTGGAAAGAGCGAC              GCGGGA ATTG TCGCGC               TGATCTGTTTCCCCT  45 7
RTCIAT899_CH17885 3632207 .. 3632218 +  -2.2  -2.50113   TCTGGCACTTCGAAA                GC-CG GAC CGAGC                CTTGATCCGCTGCTG  38 112
RTCIAT899_CH17890 3633377 .. 3633413 + -11.7  -4.74103   CTGCCCCGCTTTCTT   GAATTTCGGCCGGGCGT CCAAA GCGCCCGGCCG--ATTC   TTTTTGCATTGCGGC 100 48
RTCIAT899_CH17895 NONE
RTCIAT899_CH17900 3635268 .. 3635291 +  -3.1  -3.53012   TCTCAAGGTAACGGA          GACCATGTG ATGGAC TACAAGGTC           TTTACCGGCGCCCGC  49 16
        nagA NONE
RTCIAT899_CH17910 3637235 .. 3637268 + -25.5  -3.91412   AATCAGATGGATAGA     GAGGCCGAGCGTTTC CCGT GAAACGCTCGGCCTC      TTTGTCAGCTATCAT 100 74
RTCIAT899_CH17940 3646827 .. 3646840 +  -6.7  -3.64822   TAACGGGGTGCCTTA               TGTCC TTCA GGACA                TTTGGCTGAGAGGCT  62 118
        thiB 3647991 .. 3648003 +  -4.8  -3.23216   CTGACCGCCACCAGC                GGCA ACTGA TGCC                TTGATCATACTCACG  49 17
        thiP NONE
        thiQ 3650592 .. 3650609 +  -6.3  -2.71712   ACGACCGTGATCGGC             CCGG-TGA GGA TCAACCGG             ATTTGGCGCCGAGCC  50 249
RTCIAT899_CH17960 3652338 .. 3652365 + -10.5    -3.137   CGAGCTCTTCGAGCG        TCGCGCCGTCT TCGACC AGGCGGCGCGC         TTGGATGATCTTCAT  65 192
RTCIAT899_CH17995 NONE
RTCIAT899_CH18000 3660234 .. 3660276 + -21.2  -3.02461   CTCGCTGCCGCTAAG GCATTGCCTGACCGGCCGCC ACC GGCGGCCGGTCAGGATGCGC TCTTGGAACAAATTC 100 27
RTCIAT899_CH18005 3660599 .. 3660621 +  -4.7   -4.8543   GCTATGCAGGCTGAA           GCGGCTCCG TCGCC CTGAACCGC           TTTTTATAGCCCTTG  77 76
RTCIAT899_CH18020 3663852 .. 3663870 + -11.6  -4.45544   ATCAAAACAGAAAAA             GGCCGGCG AAC CGCCAGCC             TTTTCATTCATGCCA  93 311
RTCIAT899_CH18040 3667023 .. 3667038 +  -2.4  -3.79687   AATCCATGATTGTGC              CGGGTG ATTT CGGCCG               TGTTTTATGACAAGT  52 173
RTCIAT899_CH18045 3667947 .. 3667960 +  -8.1  -2.89569   TGCCAGGCAGCGAAA               TGCCG ATAT CGGCA                TGCTTGCTTTCGCCC  55 211
RTCIAT899_CH18060 3671501 .. 3671527 +  -4.3  -3.11634   GGCGGCTTGAGGTGG         CGAGCTGGACA ATGAC TGTCCGTCACG         TTGCCTGCTGTCGCA  47 31
RTCIAT899_CH18065 3672778 .. 3672788 +  -2.4  -4.40572   AGCAGATGGAGCTTT                 ACCG CAT CGGC                 TTTTCTGCACGTTGT  62 80
RTCIAT899_CH18070 3673454 .. 3673477 +  -7.4  -3.32844   TATCCTCTGTTCGAG          CGTCCGCC GGGCTTTG GGCGGATG           TTATCCGCTGAACGC  61 45
RTCIAT899_CH18085 3677028 .. 3677053 + -16.9   -3.7511   AAACTGTGAAAAAGA         TGCGTCCGGGG TCAC CTCCGGACGCA          TTCTGTTATCGAAAG 100 62
RTCIAT899_CH18090 NONE
RTCIAT899_CH18095 3678789 .. 3678804 +  -8.2   -5.4505   CATGCGCGGTAAGCA              GGCTCC TGAC GGGGCC               TTTTTTATTGCCCGG 100 299
RTCIAT899_CH18100 3680142 .. 3680185 + -17.6  -2.79501   CCGCGCTAAAGGCAC TGCTGCCGCAAAACC-GACTG CAA CAGTCAGGCTTTGCGGCAGAA TATAGTCAGCATCTC  91 32
        ndvA 3686729 .. 3686753 + -17.9   -4.8048   GGGCCCAAGATCAAA          GCCGGGAGAGC GAT GCTCTTCCGGC          TTTTTGCTGTCGAGG 100 51
RTCIAT899_CH18120 3688563 .. 3688578 +    -6  -3.44552   AAGACGACATAGATG              GCACCG ACGA CGGGGC               TCTTGTTGGTCACGT  55 236
RTCIAT899_CH18190 3710814 .. 3710834 + -11.1  -4.68424   GGCTAAGATGACTCA            GGGCCGG AGCGAAA CCGGCCC            TTTTTCCGTCAGTTC 100 35
RTCIAT899_CH18210 3715596 .. 3715620 +  -8.5  -3.53444   GTAGATACTTGAGAT          GGCTGTTTCGC ATC GCGAACCACCC          TTTCCGAGAAAATAA  65 90
RTCIAT899_CH18215 3717152 .. 3717168 +  -9.3  -3.27298   CCTGTAAGGCTGAAA              GGCCCGC TCA GCGTGCC              TTCGTCCTTGCACCG  65 34
RTCIAT899_CH18225 3718961 .. 3718974 +  -2.3  -2.57132   GGGAGCGAGAAATGC               CGGAT GATG AACCG                ATTCTGGACGAAGGC  38 129
        waaL 3720654 .. 3720665 +  -5.8  -3.14587   GGAAGAGGACATCTT                TGGG ATCG CCCA                 TATGCTTTTGTCGGA  52 278
         pmi 3735405 .. 3735421 +  -7.9  -2.70932   GCTCGCCATCCGCAA              GCAGCGG CTG CCGCTGA              TCCTTGGCAGAAAGC  53 65
RTCIAT899_CH18340 3741080 .. 3741091 +  -5.8  -3.22476   CTGACCCCGGCCTGA                TCCG AAAC CGGA                 TTGATCGTCAATCAT  54 26
RTCIAT899_CH18345 NONE
RTCIAT899_CH18350 NONE
RTCIAT899_CH18355 NONE
RTCIAT899_CH18360 3743991 .. 3744009 +  -3.7  -3.43564   AAGCAATGTCAGCTG             ATGCCGG ACGCG CCGGCGC             TTGTGGCTTCCCTTG  49 371
RTCIAT899_CH18370 3746189 .. 3746203 +  -8.5  -2.94695   ATCACCGACTGGGAT               GCCGC TCAGT GCGGC               TCTCCTTGGTGATGC  59 106
RTCIAT899_CH18375 3746825 .. 3746838 +  -3.9  -4.07885   GTTCATGTATGCAGT               TTTGA AGAT TCAAA                TTTTGGCCCCAAATC  60 255
RTCIAT899_CH18410 3768672 .. 3768688 +  -9.4  -3.53224   TCCGCGCCTTGCCCG              CCCTGC TTAGC GCAGGG              TTTCACCGGCAGATC  68 345
        rplU NONE
        rpmA 3769502 .. 3769525 + -16.8  -5.28942   TTCAGTCCAGAAAAA          GGGGAGATGG GGCG CCATCTCCCC           TTTTTCTTTACCCTC 100 96
RTCIAT899_CH18430 NONE
RTCIAT899_CH18435 3770911 .. 3770941 +  -6.8  -4.18018   GCCTATATCGAAGGC       GACATGACGGGC AAACGCC GCCCGATGTGTC       TTTTGGATGCAGAAG  70 157
        cgtA NONE
        proB 3773297 .. 3773311 +  -2.8  -3.16564   CGAGAAATCGAAGAA               GGATGA AGC TCATGC               TTGATACAGTCGCAC  45 7
        proA NONE
        nadD NONE
RTCIAT899_CH18460 3775668 .. 3775687 +  -2.9  -3.90316   TAGAATTCGTGGGGT            TA-CGCGA CCTTA TCGCGATA            TATTTTTGCGAACAT  54 185
        modA 3776570 .. 3776598 +    -3  -3.09635   ATCCTGAAGCCATGA        GCGTCATTGCCG CTGAT CGGCAAGGAAGG        TTCAATCATCAGGCT  43 26
        modB 3777334 .. 3777344 +  -4.6  -2.75963   TGCCTATCTCGCCGG                 CCGC AGG GTGG                 ATTTCGAATGACGCT  45 4
        modC 3778495 .. 3778511 +  -6.5  -3.64703   CAGGTCATCGGCTAT              TGCCGCT CGC AGCGTCA              TTTCCATACCGCGAA  60 95
RTCIAT899_CH18485 3779316 .. 3779329 +  -8.1  -3.01791   ATTCGCCCATATCTG               GTGCG AAAG CGCAC                TATTCAGACACAAAT  60 61
RTCIAT899_CH18490 3779967 .. 3779983 +    -5  -2.90075   AGAGTTTCGTTTTGT              GCCGCC ATGAC GGCGGA              TGTGCTTGGGAGCGG  49 107
RTCIAT899_CH18495 3780509 .. 3780522 +  -4.5  -4.27316   CGTTTTGAAAACAGT               TTGGC TTTC GCCGA                TTTTGCGTTAACGAA  66 51
RTCIAT899_CH18505 NONE
RTCIAT899_CH18510 3783528 .. 3783554 + -15.9  -3.78775   TCCAAGTAAGGATTG        GCGCCGGG-CTG GAAA CAGACCCGGCGC         TTTCATGATGAGGGA 100 32
RTCIAT899_CH18515 NONE
RTCIAT899_CH18520 3785527 .. 3785558 + -11.7  -3.05384   CGATTCATAAAGCAA      TTCCAGGAAAAGC TTTCGC GCTCTTCCTGGAA       TTGGGTGAAAGCAAA  76 66
RTCIAT899_CH18545 3793260 .. 3793280 + -11.3  -3.54489   TAGCGCTTCATTCCT            TCTCCTATT GAT AATAGGAGA            TTACTTTAAGATTGG  77 135
RTCIAT899_CH18560 3795166 .. 3795199 + -12.5  -3.58533   GCCCGATTCAGGCCA     TGCCCTGAAGGGCAG GGCG CTGCATTTTAGGGCA      TTTCCAAGATTCTCC  85 81
        leuD 3795922 .. 3795940 + -13.1  -5.24129   ATCGCGTGTTTCGAA             GCCGGGC CTTGC GCCCGGC             TTTTTTATGCCGGGC 100 54
RTCIAT899_CH18575 3798178 .. 3798210 +    -9  -2.62184   AGGGTAAGCACGCAA      ACCACCCGCCCTCG TGGTT CAAGGGCGGGTGCC      TGGTCTCAAAAGCCC  59 40
        leuB 3799477 .. 3799498 + -14.5  -5.18726   CGTGAAACACGAAAG           CCCCGTTCT GCGA AGAACGGGG            TTTTTCTTGTGAACG 100 71
        lpxE 3800469 .. 3800491 +  -5.5  -4.55798   CAGGATGGGGATGAT           CGAAGGCGG TCAAC CCGATTTCG           TTTTCGTTTGCGATG  73 98
RTCIAT899_CH18590 3800874 .. 3800884 +  -5.4  -3.08046   TAAATATCAAAGTGA                 CGAT GCG ATCG                 ATTTTCGGGTCGCAC  50 96
RTCIAT899_CH18595 3801744 .. 3801773 +  -9.2  -2.52464   GAAGAGGCGGTATCG       GCGGCGCGGC AGAACGGCAC GCCGCGCCGA        TACATTAGCAAGCAA  59 66
RTCIAT899_CH18600 3802561 .. 3802600 +    -5  -3.11634   CGGTTTCGACGCCTC  CGATTTCCTCGC-TCCGGC AAC GATGCAAGCGAGGAAATCC  TTGACTCCTGTGGAA  50 76
         asd 3803975 .. 3804002 +   -12  -5.03747   CAGGACAGAACGGAA        GCCTCGCCATTT CGAT AAACGGCGGGGC         TTTTTTGAACGATTT 100 86
RTCIAT899_CH18610 3805043 .. 3805071 + -16.8  -5.01811   TCATGAATCAAAAAA       GGCGCTGC-GACC AGAT GGTCCGCAGCGCC        TTTTTCGTTTGATCC 100 49
        acsA 3808808 .. 3808838 +  -7.7  -4.07568   GGCGGGATAGCAAAA      TC-AGCATTTAGCC GGAA GGCTAGGTGCTAGA       TTTTGCAAGGGAGGG  74 72
RTCIAT899_CH18635 NONE
RTCIAT899_CH18640 3811788 .. 3811800 +  -3.3  -3.20345   CTTCTTTGCCGTCGT                GCTTC GCC GCAGC                TATTAATCTCCACTT  45 7
RTCIAT899_CH18645 3813683 .. 3813700 + -11.3  -5.55769   CACATCTCCTCATTC             CAGAGCG TTTT CGCTCTG              TTTTTTGTTATCGCA 100 105
        purH 3815411 .. 3815421 +  -5.4  -2.57132   GCAGCTGGTTCCACC                 CTCA TCC TGAG                 CTTGTCGAAGGACGA  46 44
RTCIAT899_CH18665 3823033 .. 3823063 +    -9  -4.36914   AACAAGTAGATAGAG       CGTTTTCGCGATTC GAA GAAAAGCGGAAACG       TTTTATCGCGCGCCG  84 112
        leuS NONE
RTCIAT899_CH18680 NONE
        holA 3828101 .. 3828118 + -11.3  -3.34715   GCGACCACTCTCCAA             TCAGCCC GTAA GGGCTGA              TGTTTCACGGGAATC  75 8
        hemE NONE
RTCIAT899_CH18720 3835427 .. 3835451 -  -2.8  -4.09511   AAGATGGCGGGAAAA          TAGCGACTCA CTTTC TGAACCGCAA          GGGGGGCAGGCAAAA  58 79
         rho 3833958 .. 3833990 - -19.9  -4.84527   TCGATACATCAAAAA      CAAGATCGGGCCGCG TTA CGCGGCCCGATCATA      GCACTATTCAACACC 100 75
RTCIAT899_CH18710 3832521 .. 3832534 -  -5.3  -2.81316   TCAGGAGTCAAGAAG               GTTTC ACGT GAAAC                GTCCACCGAGAGTAT  47 63
        gidA NONE
        gidB NONE
RTCIAT899_CH18695 NONE
RTCIAT899_CH18690 3827890 .. 3827900 -  -4.6  -4.29738   CGAGATGGATGAAAA                 GCGC CTC GCAC                 CCGCTCAGGTCATGC  68 328
RTCIAT899_CH18670 3822565 .. 3822580 -  -5.4  -3.84406   GCTCGAGGATAACAA              CGCCATC ATG GA-GGCG              GCGCTCGCGCTTGGA  60 511
RTCIAT899_CH18660 NONE
RTCIAT899_CH18655 3815171 .. 3815198 -  -6.2  -3.16921   ATCAAGGCCGAGGAA        GC-CGCCAAGGCC ATG GGGCTTGCCGAGC        CGCTGACACGCGGCT  50 376
RTCIAT899_CH18630 3808808 .. 3808838 -  -3.3  -4.34402   GGCGGGATAGCAAAA      TC-AGCATTTAGCC GGAA GGCTAGGTGCTAGA       TTTTGCAAGGGAGGG  62 148
RTCIAT899_CH18620 3805826 .. 3805845 - -12.1  -4.56597   GTTGCGCTGCAAAAA            GCCCCGG TCGAAG CCGGGGC             TTTGCAACAATCCGA 100 51
RTCIAT899_CH18615 3805043 .. 3805071 - -16.8  -5.30155   TCATGAATCAAAAAA       GGCGCTGC-GACC AGAT GGTCCGCAGCGCC        TTTTTCGTTTGATCC 100 86
RTCIAT899_CH18570 3795626 .. 3795638 -  -9.1  -3.62522   CAACTGCTTCAAGAA                CGGCA TTC TGCCG                ATCAAGGTCAGCCAG  68 376
RTCIAT899_CH18555 NONE
RTCIAT899_CH18550 3793215 .. 3793227 -  -4.9  -2.66733   TCGCAACGGATAGGA                TAAAG TGA CTTTA                AGGATAAGCCTATTA  44 372
RTCIAT899_CH18540 NONE
RTCIAT899_CH18535 NONE
RTCIAT899_CH18530 3786516 .. 3786543 - -10.6  -3.25823   TTTGCCCGATACGAA        GGTCGCAATCTC AATG GAAATTGCGGCC         TCGCGGCATAACTTT  71 8
         bfr 3785523 .. 3785562 - -14.5  -3.91897   GGGCCGATTCATAAA  GCAATTCCAGGAAAAGC TTTCGC GCTCTTCCTGGAATTGG   GTGAAAGCAAAGATA 100 87
RTCIAT899_CH18500 3780235 .. 3780270 -  -6.9  -3.14211   ATCCTTCTCGACGAA   CGCGGC-AAGGCGCTCG ACAG CGAA-GCCTTCGCCGCC    ATGCTCGGGACATAC  54 297
RTCIAT899_CH18480 3778134 .. 3778144 -  -2.4  -3.66803   TCTGAAGACGGCAAA                 GCTC TTT GTGC                 CGGGTCAGGCGGCGG  49 307
RTCIAT899_CH18405 3766516 .. 3766529 -  -2.3  -4.87665   TTTGACTGACAAAAA               GCGAA AGCT TGCGC                AACTCATTACGATCA  72 452
RTCIAT899_CH18400 NONE
RTCIAT899_CH18395 NONE
RTCIAT899_CH18390 NONE
RTCIAT899_CH18385 NONE
RTCIAT899_CH18380 3747171 .. 3747187 -  -3.7  -3.93673   GAAATATTCGACAAA              CTGACTT ATG AAGTTAG              CAGTGTCCAATCGAA  58 297
RTCIAT899_CH18365 3743348 .. 3743372 -  -2.1  -3.36327   GCATGTGACCGACAA          TGCCGTCTA TCTCTTT CAGACGGAA          TACAAGCTGCCGCTG  44 416
RTCIAT899_CH18335 NONE
RTCIAT899_CH18330 3739131 .. 3739145 -  -4.2  -3.42147   TCGAACCAAGATTAA               CGGAGT CAG AGTCCG               TCGTTCTACCATTGA  51 213
        rfbB NONE
        rfbD NONE
        rfbA 3735993 .. 3736004 -  -2.2  -2.53822   CGTAGGTTAGAATAT                CTGC TCGC GCAA                 GATCCCAAGGAGATA  38 5
        rfbC 3735140 .. 3735158 -  -8.8  -3.44051   GCTGCAGTATCACAA             CCATCGCT CCG AGCGTTGG             ACCGCCGTTTCAGGG  66 246
RTCIAT899_CH18295 3733541 .. 3733568 -  -2.6  -3.14132   TCTGGGGCTGACCAA        TCCGGGCCT-GCG GTC CACGAGGACCGTA        CCCACACCGGCAAAA  42 151
         gmd NONE
         fcl NONE
RTCIAT899_CH18280 NONE
RTCIAT899_CH18275 NONE
RTCIAT899_CH18270 NONE
RTCIAT899_CH18265 NONE
         wzm NONE
         wzt 3723019 .. 3723051 -    -2  -3.41023   AACGGGCAAAACACA     TGTG-CGCAC-CCCGT TCA ACGGTCGTGCGTCATA     AAGGTAAAATAACCC  45 102
RTCIAT899_CH18250 3722174 .. 3722186 -  -2.6  -2.56095   GTGATATCGAACTCA                GGCA TATTC CGCC                CCTTGCCAGTATTCT  38 69
RTCIAT899_CH18245 NONE
RTCIAT899_CH18220 3716777 .. 3716801 -  -7.2  -4.56597   GGTCGCGGCGAAAAA         GCCGATCAACGG CGC CCG--GATCGGC         ATATTCGGCCTGACT  76 383
RTCIAT899_CH18205 3713381 .. 3713406 - -12.5  -3.54543   ACTTACCGCCCCAAA         GCGGCGGACCG GGTT CGATCCGACGC          GTACACTTAGAGAGC  85 110
        galE NONE
RTCIAT899_CH18195 3710666 .. 3710691 -  -3.3  -3.67597   GCCCGGAGGCAACAA         GATCGTCTTCA AGGG TGAAGATTATC          TGGCGAAATTCGCGC  51 145
RTCIAT899_CH18185 3708961 .. 3708980 - -13.6  -2.53876   TCGGATTTCAAGGGA            TGCGGGCT TTCA AGCCCGCA             TCCGTCGATCATTTT  78 46
RTCIAT899_CH18180 3707273 .. 3707301 -  -2.2  -3.23692   GATCAGCACCAGGAA        GATGCCGAGTTC GGGCG GCACGCGGCGCC        TTTTTGGCCGTGTGA  43 110
RTCIAT899_CH18175 3706267 .. 3706286 - -12.8  -4.74504   ATTCGAATGGAAAAA            GGCGGGGC AAAT ACCCCGCC             TTGAAGGCATGCTTT 100 67
RTCIAT899_CH18170 NONE
RTCIAT899_CH18165 NONE
RTCIAT899_CH18160 NONE
RTCIAT899_CH18155 NONE
RTCIAT899_CH18150 NONE
RTCIAT899_CH18145 3699657 .. 3699678 - -10.1  -3.53012   TTGGTCGTGTTTAAA           CGGCCCGTT CGTT AACGTGCCG            TGGGGGCGCAAAGCC  71 149
RTCIAT899_CH18140 3699334 .. 3699351 -  -2.7  -3.62096   GTCGAGGACCCGAAA             GATC-GGC AAC GCCTAATC             AGCAAAGAATGCGGC  51 24
RTCIAT899_CH18135 3698993 .. 3699012 - -10.7  -3.91488   AAGTCGGCCAAACAA            GCGGCAG TATTCC CTGCCGC             TTCCAAAGGCATCAC  80 42
        ndvB 3689664 .. 3689695 -   -16  -3.30038   GACACTCAAATGCAA      TCGGGGCC-AAAGAG TTC CCCTTTTGGCCCCGA      TCGTCGAAGCGAAAC 100 53
RTCIAT899_CH18125 3688376 .. 3688421 -  -8.2  -3.04322   GGCAACGGGGGAAGA TCGACAGGCCCAACCGCGCAG GTACG CAGCGCGGCTGAGCCC-TCAG TGACGCTTTCCGAAA  60 22
RTCIAT899_CH18110 3683825 .. 3683835 -  -6.8  -2.80344   CCCTTACGGAATAAG                 TCCG TTT CGGA                 AAGCGATTGCAACGA  52 3
         pyc 3680141 .. 3680186 - -16.3  -2.64155   GCCGCGCTAAAGGCA CTGCTGCCGCAAAACC-GACTG CAA CAGTCAGGCTTTGCGGCAGAAT ATAGTCAGCATCTCA  89 75
RTCIAT899_CH18080 3674744 .. 3674754 -  -3.2  -2.77899   TCTGTTCATTAATCA                 TGAG GGC CCCA                 ATCCGCTCTGATAGC  41 8
RTCIAT899_CH18075 3673526 .. 3673546 -  -8.9  -3.53012   CGCTTCGGGCTGAAA            GCGGCCAAT GGC AGCGGCCGC            AACGCGAGCGGATGA  68 150
RTCIAT899_CH18055 NONE
        ispG 3667475 .. 3667487 -  -4.7  -2.74144   CGCCCAGCTTCAAAT                CGCTG GTC CTGCG                CGGCTACGGCATTCA  43 324
        mtgA 3664892 .. 3664907 -  -2.5  -3.11292   ATTGCCAATATAAAG              CGTGA GCTTGT CCACG               ATCGCATGTTCCTTT  42 152
RTCIAT899_CH18030 3664118 .. 3664142 -  -3.6  -3.02947   TACGGACGACACATA         TTCACGGCCAGC AAG GC-GGCCG-AAA         CAGACATGCATCAAT  45 142
        rpmF 3663852 .. 3663870 - -13.8  -5.30339   ATCAAAACAGAAAAA             GGCCGGCG AAC CGCCAGCC             TTTTCATTCATGCCA 100 57
RTCIAT899_CH18015 NONE
RTCIAT899_CH18010 3660237 .. 3660272 - -19.8  -2.52464   GCTGCCGCTAAGGCA    TTGCCTGACCGGCCGCC ACC GGCGGCCGGTCAGG-AT    GCGCTCTTGGAACAA 100 434
RTCIAT899_CH17990 NONE
RTCIAT899_CH17985 NONE
RTCIAT899_CH17980 3654862 .. 3654874 -  -4.1  -3.40022   GAACGAACAGACGAA                TGCAT CAC ACGCA                AACGCGCCGTCCGGC  49 134
RTCIAT899_CH17975 3654418 .. 3654431 -  -5.2  -3.06501   TACACCTTTATCGAA               GGCC TGTCAC GGCC                TTCAATCAGTCGCCC  50 31
RTCIAT899_CH17970 3653418 .. 3653435 -  -9.8  -5.63517   GTTCCAAAGAAAAAA             CCCGGC ACGAAG GCCGGG              TTTTTTGAAGCGATA 100 55
       rpoH2 3652111 .. 3652154 -   -11  -4.02132   GTTCAAACTGATAAA TG-CCCTGCCAACCGGGGCAA ACA TTGCACCGGGCGACAAGGTCA AAATCATTTCGGAAT  85 81
RTCIAT899_CH17935 3644475 .. 3644495 -  -6.8  -3.08996   TATCCCTAGGGAAGA            GCGCCGTT ACCGG AACGGTGC            CGCCGAGCCGATCAT  54 37
RTCIAT899_CH17930 NONE
RTCIAT899_CH17925 3641773 .. 3641802 -  -9.9  -3.02511   CGGACTTCCCCAACA       TGCGCCACGGGCCG CGC CGGCCCGGGG-GTA       TCAACCGGAGCTTGG  67 172
RTCIAT899_CH17920 NONE
RTCIAT899_CH17915 3637235 .. 3637268 - -25.5  -2.94126   AATCAGATGGATAGA     GAGGCCGAGCGTTTC CCGT GAAACGCTCGGCCTC      TTTGTCAGCTATCAT 100 37
RTCIAT899_CH17860 3625875 .. 3625897 - -10.5   -4.7254   AGCTTGCATGAAAAA           CGCCTCGTC CTTGC GACGGGGCG           TTTTGCGTTTTGGGC 100 81
RTCIAT899_CH17850 NONE
RTCIAT899_CH17845 3622843 .. 3622853 -  -8.2  -2.79878   GTTAGTCATCTAAAT                 CGCG ACC CGCG                 CATTAATATTATATA  57 183
RTCIAT899_CH17840 NONE
RTCIAT899_CH17835 NONE
RTCIAT899_CH17830 3620306 .. 3620316 -  -8.2  -3.58343   GCGATCAGCCCCAAA                 GCGC CTT GCGC                 ACGCTCTCGGGCCAT  65 4
RTCIAT899_CH17825 3619192 .. 3619237 -  -4.9  -4.07133   TATGTTCAGAAATAA CCTACAGCG-CC---GCGCGTCA TATA TGACGCGCAAAGGTCGCTGTAGC ACTTTTAACCTGCTG  60 115
RTCIAT899_CH17820 3616286 .. 3616296 -  -8.2  -2.63596   CGCCACCTCAGACGA                 CGGC TCC GCCG                 TCATCGACCTCGCCG  52 406
RTCIAT899_CH17785 3609212 .. 3609229 -  -8.5  -3.37344   TGGCCACCTAAGCAA             TGTAACC ATAT GGTTACA              AGATCGCGCGTTGTC  64 97
RTCIAT899_CH17780 3607389 .. 3607399 -  -3.2  -4.59773   GGGCATGCTCAAAAA                 GACT CAA AGCC                 CCATGATATCGACCA  67 46
RTCIAT899_CH17775 3605896 .. 3605915 - -16.4  -3.09671   ACGGGAAGCTCAACA            CCGCGGCC TTAA GGCCGCGG             CTCCAGCAAATTCAA 100 14
RTCIAT899_CH17750 3599354 .. 3599373 -  -2.1  -3.41527   CAAGGGCGATTACAA            GCTGC CGCCGGAAAT GCAGC             GACAATTAAAGCAGG  44 332
RTCIAT899_CH17710 3591574 .. 3591587 -  -3.7  -3.66803   TTCGAATAGTGGAAA               CGCCG CTCC CGCCG                GCAATTCGCCTGACC  53 301
RTCIAT899_CH17685 3585640 .. 3585672 - -16.3  -4.90013   CAATTCAAGGAAAAA      CCGGCGCCGGC ACAAGGGAGAG GCCGGCGCCGG      ATGGCACTAGAGCTG 100 32
RTCIAT899_CH17680 NONE
RTCIAT899_CH17675 3583780 .. 3583828 - -20.6  -4.45771   ATTGCAAAAGACAAA GAG-ATGGAGCGGCTCAGCGTTTC CGT GAAA-GCTGAGCCGCTCCAGGCTC AGGATTTCACGGCGC 100 24
RTCIAT899_CH17670 3582646 .. 3582657 -  -7.2  -2.67021   CGCTTAAAGAGCAAG                GCCG CTCG CGGC                 ATCGAAGACGTAGAC  54 2
        hutI 3572997 .. 3573008 -  -2.2  -3.36175   AACCCGGATGGAGAA                CGAC AGTC ATCG                 GTTGAACCTCTTTCC  45 20
        hutH NONE
        hutU NONE
RTCIAT899_CH17615 3569062 .. 3569095 -  -5.1  -3.86202   CTGGAGGAGATCAAA     GCGTCCGCGGCCGGTT TTG ATCCG-CCGCGGTCAG     TTCGACACGCAGTTC  59 133
RTCIAT899_CH17605 3567757 .. 3567772 -    -6  -4.02132   TTGCAAAGCCACAAA              CCCGGC TGGC GCCGCG               AAAAATTGACACGGC  65 106
RTCIAT899_CH17600 NONE
RTCIAT899_CH17595 3565739 .. 3565788 -  -6.6  -4.31065   ATACACAAAATCAAA GACCTAAAGCGTGAGAAGCGAATCT GAA AGA-TCGCGAC-C-CGCTTTAGGCC AGCTCGAGCCATTAC  74 45
RTCIAT899_CH17580 3563312 .. 3563335 -  -5.9   -4.1552   TATCCCGTCAACAAA          CGTCGCGGG CATTTT CACGCGACA           GTTGGCCGGATCTTC  67 399
RTCIAT899_CH17570 3559354 .. 3559376 -  -9.1  -2.52464   TGTGGTTGCAAGGGA           GGGTGGCGC TACCC ACACCACCC           GTTGCAGCAGATCAA  59 37
RTCIAT899_CH17565 NONE
RTCIAT899_CH17560 NONE
RTCIAT899_CH17555 3551102 .. 3551129 -  -5.5  -2.74012   TTACGACGGCAACGA        CGGAGGCGG AGATCCTTTA CGGCCTCCG         GCTGCTGCCTGCGGG  46 337
RTCIAT899_CH17530 3545246 .. 3545261 - -10.4  -2.72739   CTGAATTTAGATAAT              TCCGGC CTTT GCCGGA               TATGAAATGATGTCG  66 144
RTCIAT899_CH17510 3542385 .. 3542421 - -15.2  -3.16564   TTGCGATTTTATTAA   CGCGGACGCCGGCGGC TCGATAT GCCGCCGGCG-CCG-G   AAACGCTACGGCGCA  95 41
RTCIAT899_CH17505 NONE
RTCIAT899_CH17500 NONE
RTCIAT899_CH17495 3539339 .. 3539359 - -19.7    -5.252   TACGTCGACAAAAAA            GGCCGGGCG AAA CGCCCGGCC            CCTGGCCTTGGGAGG 100 58
RTCIAT899_CH17470 3532218 .. 3532252 -  -5.7  -4.09685   TGCGATGCTGGAAAA    CGAAATTGC-CGCCCG CAAT CTGACGCGCAATGTCG     CACTGCATGTGTCGA  65 402
RTCIAT899_CH17455 NONE
RTCIAT899_CH17450 NONE
RTCIAT899_CH17445 3526468 .. 3526480 -  -5.5  -4.91109   GCTGGACGAGAAAAA                GGCAA AGC CTGCC                ATCGCTTGATCTGCC  80 283
RTCIAT899_CH17420 3521311 .. 3521342 - -14.4  -3.23638   CCAAATAGGGATCAA      GCCGGCGACAGGAG CAGC CTCGTGTCGCCGGT       AAACCTCTAGGCTGC  95 32
RTCIAT899_CH17410 3519824 .. 3519842 -  -2.3  -2.64472   CATGTGGCAAAGCTA             TGACGGA TATTT TCCGCCT             GGCAAGAGCTTCGGG  38 97
RTCIAT899_CH17405 NONE
RTCIAT899_CH17400 3517705 .. 3517715 -  -4.6    -3.395   TGCGAAAATGAAAAG                 CGAC GAG GCCG                 TGAGTTTTACCTGAG  51 32
RTCIAT899_CH17395 NONE
RTCIAT899_CH17390 NONE
RTCIAT899_CH17385 NONE
RTCIAT899_CH17380 NONE
RTCIAT899_CH17375 NONE
RTCIAT899_CH17370 NONE
RTCIAT899_CH17365 NONE
RTCIAT899_CH17360 NONE
        cfa2 3509202 .. 3509220 - -14.6  -2.74144   CCTGCACCTGCAAAG             CCAGCGCA GGG TGCGCTGG             AACTTCGATGCGGGC  83 425
RTCIAT899_CH17345 3507426 .. 3507437 -  -4.4  -3.27653   AGCCGGAGCAGAAGA                CCTT CCTC AAGG                 GCACCACCATTTTCG  49 286
RTCIAT899_CH17330 3505892 .. 3505908 -  -4.4  -3.58522   AGCATGATTCCCAAA              CGAACC GATAA AGTTCG              CCGGACAGCACGCCG  52 113
RTCIAT899_CH17325 3504809 .. 3504838 - -18.7  -3.96216   CGTTCATCCAAACAA       GCGACCGTGCGAA ATGT TTCGCACGATCGC        CATCTACATCAGGAA 100 50
RTCIAT899_CH17320 NONE
RTCIAT899_CH17315 3503771 .. 3503787 -  -2.2  -3.20991   CTCAATCGAACTGAA              TCTAGG TCAAT CCTCGA              TACGTCTCGCTTCCG  43 15
RTCIAT899_CH17305 3501080 .. 3501116 - -16.6  -3.53012   CGGCCCTTGCCGAAA    CCATCGTCGAGGCCGA CCGCC TCGGCCTCGACATCGG    CTCGATCAACACCCT 100 308
        tesB 3499144 .. 3499173 -  -9.5  -4.02456   AAAGAGCAGCACAAA       TAACGTGCAATTT TATA AAATTGCACTTTA        TTTAATCATTTGCCT  80 27
RTCIAT899_CH17290 NONE
         amt 3497109 .. 3497132 - -10.2  -4.93877   TCGCACCAAAGAAAA          GGGCCCGAAC CGAG GTCCGGGCCA           AGTGCGGCCTATTTA 100 109
RTCIAT899_CH17280 3494260 .. 3494279 -   -10   -3.0976   CGCAATACCGGAAGA            CGGATCGC CTCA GCGATCCA             GAATGTCGGCTTCGG  67 15
RTCIAT899_CH17275 3493423 .. 3493436 -  -3.7  -4.86731   GTGGCGGAAAGAAAA               GCGCC ATTC GTCGC                TTACTATGGCTCGGG  75 54
RTCIAT899_CH17270 3492405 .. 3492441 - -12.3  -3.19285   AAATACAAAAGGATA    GAGCGTTTTCGCGATTC AAA GAAAAGCGCAAACGCTC    TGATATCCTCAATCC  78 44
RTCIAT899_CH17255 3490405 .. 3490415 -    -4  -3.71645   AAGGCGAGATTTAAA                 TTCT AAA AGAA                 AAGGGGTGGACCAGA  53 111
RTCIAT899_CH17250 3489469 .. 3489496 - -15.6   -4.4891   TCCAGGATGACAAAA        GCGGCTCGGAGT CTTC ACTCCGAGCCTC         TTTGCATAAACTGAT 100 53
RTCIAT899_CH17240 3487490 .. 3487505 -  -5.4  -3.62046   TCAGGCGGCCAATAA              CACCAT GATC ATGGCG               GACATACAGCCCGAG  57 338
RTCIAT899_CH17230 3484734 .. 3484781 - -11.6  -3.53012   GTCTTGGCCTCGAAA TTTACCTTGACCTCAAGATAAT CTGA AATACCTTGACGTCAAGATAAA TTCATGGCGAGATCT  77 510
RTCIAT899_CH17220 3483761 .. 3483780 - -16.4  -4.08144   GGCATGAATGACAAA            GGGCGGCC TGAT GGCCGCCC             TTTTCGTTTGTCGGG 100 60
RTCIAT899_CH17160 NONE
RTCIAT899_CH17155 3471678 .. 3471703 -  -7.5  -4.11692   CATCGATGCTGAAAA         GCCCTTCTCCC CTCG GGGAGAAGGTG          GCCCGAAGGGTCGGA  74 161
RTCIAT899_CH17145 3470394 .. 3470404 -  -2.4  -3.35176   TAACAAGGAGAGGAA                 GGCG AAC CGCT                 AACCTCAATCGTCTC  45 30
        dapF NONE
RTCIAT899_CH17135 3468102 .. 3468123 -  -5.7  -2.70932   GTGTCCGTTGAAGCA           TTAGGCCGC GTCG GCGGCCAGA            AGTTGCATGTCGAGA  50 4
RTCIAT899_CH17130 NONE
        ispZ NONE
RTCIAT899_CH17120 3465224 .. 3465243 -  -2.8  -4.50058   GAGGGACAAGCAAAA            GGCATTTT CCCG ATAACGCC             CGCTCACCCGGCGCT  64 78
        acnA 3458765 .. 3458801 - -18.8  -4.60487   CATCACCGTGAAAAA    CAAGAGGCCGCCGGAA GCGTT TTCCGGCGGCCTCCCA    TAACAGTGCTGAATG 100 45
RTCIAT899_CH17085 3457609 .. 3457634 - -13.3  -3.16534   AGGAAGTATAGGGAA         CCGTTTGGCGC CGCC GCGTCAAACGG          CCCGGCCGGGGCGTA  87 210
RTCIAT899_CH17080 3456867 .. 3456894 -  -7.6  -3.53091   ACCGGCCTGTTGAAA        GGCACCGGCTAC AAGC ATGGCCGGTGGC         TGGATACGATGCTGA  62 173
RTCIAT899_CH17055 3451314 .. 3451327 -  -3.8  -2.60211   AGGGCGGTAAAAAGT               CTCG GCATGA CGAG                CACTCCCCGAATCTC  42 88
RTCIAT899_CH17050 3450655 .. 3450679 -  -3.6  -3.02511   TGCATCTCTTCAATA         CCCTTG-CGCT TGGC AGCAACAAGGA          CATTCCCGATCCCTA  45 71
RTCIAT899_CH17045 NONE
RTCIAT899_CH17040 3449868 .. 3449884 - -10.8  -2.53995   ATTCACCTCAATCGA              GGCCCG TCGGC CGGGCC              GTGTAAACATATGGT  65 57
RTCIAT899_CH17035 3449454 .. 3449467 -  -9.5  -3.06694   ACCGATCGGGAAAAG               CGGCC ATCA GGCCG                TCTTCACGGCCTCGG  67 18
RTCIAT899_CH17030 3448473 .. 3448494 - -11.5  -4.67038   CCTTCAAAAGCAAAA           GGCCGGTCA GTAA TGGCCGGCC            TCATCCTTACCGTCA  95 85
RTCIAT899_CH17025 3446984 .. 3446997 -  -5.9  -2.88579   GCAAGCGGCGACATA               GCCCC AAAG GAGGC                GTATGGGCTTGCGCA  51 59
RTCIAT899_CH17020 3446286 .. 3446298 -  -3.3  -4.56597   CCTGGCGGTCAAAAA                GGTGG ATG CCATC                AAGGGCACGCCGTTT  68 324
       argG1 3443596 .. 3443622 - -21.6  -4.38927   TTTCCACATAAGAAA         GCCCGCCTCCGG CGA CCGGAAGCGGGC         CTTTCAGCATCTCGA 100 49
RTCIAT899_CH16995 3442229 .. 3442241 -  -4.7  -3.57731   CGAAGCACGATATAA                GGCTG CTC CCGCC                GAATTGGTATGGCGG  52 68
RTCIAT899_CH16990 3439784 .. 3439805 - -10.1  -2.78384   TGCGGCCCTATGAGA           TCGAGGAGC GCAC GCTCCTCGC            CCAGCATAATCTGTC  64 341
RTCIAT899_CH16980 3438613 .. 3438634 -    -8  -3.53444   GCAGTGTTTGGTAAA           CACGCCAA TTGCAT TTGGCGCG            CTCATACCCTTTTTT  65 198
        typA 3436709 .. 3436728 - -12.1  -4.89009   ACATGCAATTAAAAA            CCCCGGC ACGAAG GCCGGGG             TCGAATGCATCGCTC 100 52
RTCIAT899_CH16970 3435901 .. 3435918 -  -2.6  -3.48276   TTGTCCCCTAGATAA             GGATGG TTGCCG CCAGCC              AAATAATAGGATTCA  47 155
         ppa 3435282 .. 3435309 - -15.6  -5.41143   CAGCGCGCAAAAAAA        TCCTCCGGATCG AGGG CGAGCCGGAGGA         TTTGATGGAGAAATT 100 63
RTCIAT899_CH16950 3433355 .. 3433365 -  -2.4  -2.73243   ACGCACTCCTCAAAC                 CGCC TGC GGCT                 CGCCGTTGCGATCCG  39 9
RTCIAT899_CH16945 3432671 .. 3432711 -  -8.3  -4.22132   GTAAAGACAAAAAGA  TAGAGCGTTTTCGCGATTC GAA GAAAAGCGAAAGTGCTCTA  AAGGTCTTCGCCTGA  77 23
RTCIAT899_CH16910 NONE
RTCIAT899_CH16905 NONE
RTCIAT899_CH16900 NONE
RTCIAT899_CH16895 NONE
RTCIAT899_CH16890 3422833 .. 3422850 - -12.7  -2.73441   CATGACGCGGCAAAC             GCCGGCA GCTA TGCCGGC              TCGGCCGATGTCTAT  69 206
        sdhC 3421883 .. 3421917 -  -8.5  -2.91322   ATATCCTTTAAAGCA    TGATCCCGAAGGGCGC CTGA GCGC-CTCCGGGAGCG     ATCATGCCAATCAAC  59 36
        sdhD NONE
        sdhA NONE
        sdhB 3418778 .. 3418815 -  -3.3  -3.65351   CCATCGTCATGCAAA   CATCATCCTCGTCGCCCG AAG CCGGCGA-ATGGGTGACG   GCGGGTCAGACCCGC  51 31
RTCIAT899_CH16860 3417930 .. 3417943 -  -3.1  -2.92951   GATACCGCCAGAAAT               TACGG TAGG CCATA                GCTGGACAAGAATCG  42 48
RTCIAT899_CH16855 3417254 .. 3417280 -  -8.6  -2.71712   TCCGCCTGTGCAAAT         GGGGACGCATCC AGA GAATGCCGCCCC         TTTCAAATAAGCTTA  57 38
RTCIAT899_CH16850 3415912 .. 3415922 -  -2.4  -4.25104   CCTTTGCGATCAAAA                 TCCG TGG CGGG                 ACACCTGCAAGGCAT  60 169
         mdh NONE
RTCIAT899_CH16840 3413686 .. 3413699 -  -2.3  -3.05463   AGCCGTTGGAGCGAA               GGAAG CAGC CATCC                CGATCAGCCCTTGAC  42 29
RTCIAT899_CH16835 NONE
        sucD 3412240 .. 3412273 - -13.2  -3.63968   TTGCAAATGTCGAAA    CCGGACGGGACAAGGC GACT GCC--GCCCCGTCCGG     CCTTGCTATAGGTAG  89 43
        sucA 3408974 .. 3409002 - -18.1  -3.01712   CGCCGCGGCGCAAGA        GCCCGAGCGACCG TTG CGGTCGACCGGGC        ATTTGCCTGATTGCG 100 154
        sucB 3407635 .. 3407652 -  -3.3  -3.11634   GTCGACATGATCCAA             CGCTCCC CTTA GAGATCG              AGAACGAGACGTTCC  43 16
RTCIAT899_CH16815 NONE
RTCIAT899_CH16810 NONE
RTCIAT899_CH16805 NONE
RTCIAT899_CH16800 NONE
RTCIAT899_CH16795 3403421 .. 3403464 - -16.2  -2.82623   TGTTGGTGAGAACGA TTGGACGATGCGATGCACGGG AGC CCCGTACATCGCATCATC-AG GCAAGCATTGCAATC  90 72
RTCIAT899_CH16790 3400477 .. 3400499 -  -2.8   -2.9627   GCAAGCTACCATACA          TTG-CGATC CCATCC GATCGGCAA           ACATCGACTGCGGCA  42 62
RTCIAT899_CH16785 3399701 .. 3399713 -  -7.7  -3.05816   CTATCTCGTAGGCAA                CATCG GCG CGATG                ATCCCGATGCTGAAG  56 234
RTCIAT899_CH16770 NONE
RTCIAT899_CH16765 3395387 .. 3395398 -  -3.6  -3.36175   AAGTTTCACTGACAA                CGCC TGCG GACG                 CATAGGTTTCGAAGG  49 60
RTCIAT899_CH16755 3392867 .. 3392881 -  -7.8  -3.64822   ATTTTGGTATCCAAA               TCGGCC CTG AGCCGA               GGACCTGCTTTTAAT  65 64
        priA 3390432 .. 3390457 -  -3.2  -3.82083   GCATTACAAGGGAAA         GGTGCAGCCAG GATAT CTG-CCGCGCC         AATCACAGAAAGCTT  54 28
RTCIAT899_CH16745 3389736 .. 3389752 -    -8  -4.09292   AACCCAAGAACCAAA              CTTCCG GGTGA CGGAAG              CGATATGTCCTTGAA  77 240
        atpH NONE
        atpA NONE
        atpG NONE
        atpD 3385200 .. 3385225 - -13.2  -3.17723   TTATTCGCAAGGCAA         GGGCGCGCGG GCAATG CCGCGCGCCG          ATGGATTGGCCTGAT  87 40
        atpC 3384707 .. 3384723 - -11.5  -5.85737   ACATCAACAAAAAAA              GCGGCCC AGA GGACCGC              CTTCATTTCACTCAT 100 57
RTCIAT899_CH16710 NONE
RTCIAT899_CH16705 NONE
RTCIAT899_CH16700 3379665 .. 3379710 -  -8.9  -2.64735   ATGTGAGGCACATCA GCGCCGCGATCCCCTTCTCCC CTCG GGGAGAAGGAACTTACAGTGC TTAAATACGTGTCGC  59 26
        soxR 3376635 .. 3376650 -    -4  -4.08394   ACATGCGCTGGAAAA              GATCGGC GAA GCC-ATC              GGCCTCAAGGGTAAA  59 513
RTCIAT899_CH16670 3373677 .. 3373687 -  -6.8  -3.94877   AGCCTCTAATAAGAA                 TCCC CCA GGGA                 ACGTTTATAATATTA  68 96
RTCIAT899_CH16665 NONE
RTCIAT899_CH16660 NONE
RTCIAT899_CH16655 NONE
RTCIAT899_CH16650 NONE
RTCIAT899_CH16645 3367207 .. 3367227 - -12.6  -3.67173   ACAAACTCCCAACAA            TCTCCCCC CTTGT GGGGGAGA            TGTCGCGAAAGCGAC  86 71
RTCIAT899_CH16640 NONE
RTCIAT899_CH16635 3365964 .. 3365983 -  -2.1   -3.1505   AGTACTGGTTATTAA            GCCGA CTTAACTTCC TCGGC             CGGCGCGGGCCTGTG  42 2
RTCIAT899_CH16630 3364140 .. 3364175 - -16.2  -3.04517   AGCCCTGCTGAAAAT    CAAGAAGCCGCCCCGA AACT TCGGAGCGGCTTTTCG     TCATTCGGAGGATCG 100 42
RTCIAT899_CH16595 NONE
RTCIAT899_CH16590 NONE
RTCIAT899_CH16585 3349368 .. 3349409 -    -5  -3.34517   ACTGTGCTGGAAACA CTCTCTCCGGAGCGGCGGG TAAAC CCCACCGCTCC-GAGCTTA TTTGCGGCAATCTAT  53 37
        hemA 3347694 .. 3347721 -  -5.4  -3.72695   ATGCGGCCGAGGAAA        TCGCCTTCCACG CCTT CGTGGATGGCCG         CATCGGCTTCCTCGA  60 295
RTCIAT899_CH16570 3346199 .. 3346226 -  -3.2  -3.87994   ATGCAGGCCCACAAA        GGATGGGCGGTG ACGT CCTCGCTCACCC         CACCGCAATCCTATT  54 20
RTCIAT899_CH16550 3341398 .. 3341430 -  -2.6  -5.45802   GCGTTAAAACAAAAA      GGCGGAGCGGTTCA GAGGT TGAACCGCTCTAGA      AACTGGGCCGCGGCA  85 21
RTCIAT899_CH16545 3339925 .. 3339936 -  -7.2  -4.29325   GATCAAGACGGAAAA                GCGC CTGC GCGC                 CATGGCAAGCGGCAC  74 203
RTCIAT899_CH16515 NONE
        aroB NONE
RTCIAT899_CH16505 3332723 .. 3332737 -    -5  -3.14132   CCTTGCCGTCATCAA               TGAAAG CCA CCTTCA               TGCGGGCCATCAGCC  48 240
RTCIAT899_CH16495 3331755 .. 3331770 -  -3.2  -2.87132   TCTCGGCGCGATATA              TGATCG CTTG CGAGCA               TCCTTGAACAGAGTC  42 173
       cobS2 3330582 .. 3330622 -  -6.9   -4.3613   GTCAAAACAAAAAGA  TAGAACGTTTTCGCGATTC GAA GAAAAGCGGAAATGTTCTA  GGCTTCGAGCACGAT  74 23
       cobT2 3328589 .. 3328602 -  -6.7  -2.85354   GATGCCAAGGGAAAC               CTGAG CGGG CTCAG                CTGGCGCGGCGCATG  52 22
RTCIAT899_CH16480 3327460 .. 3327500 - -11.2  -2.57564   CCATTTCCTGACAAG GAGGATGGC-AGCGGCC-GA GAA CCAGGCCGCTCGCCACTCTC AATTCTGGCTGACGA  68 24
RTCIAT899_CH16465 3325296 .. 3325310 -  -3.5  -4.06687   ATTGCGTAGAAACAA               CGACG GGAAG CGTCA               AGCGTTCTGTGAAAC  58 51
RTCIAT899_CH16460 3323932 .. 3323967 -  -8.2  -3.53444   TTATCGGGTGCGAAA    CGAGAC-GAGCGGCCGC GCC GTGGCCGGCCTGTCTCA    GGGCGGCTATCAGGC  62 381
RTCIAT899_CH16440 3320979 .. 3321000 -  -9.3  -2.74144   GCGCTACGGCGAAAG           CGTCACGCG CCAT CGCGCGTCG            TCGGTATGCCGCGCG  60 6
       hisC2 NONE
RTCIAT899_CH16430 NONE
RTCIAT899_CH16425 3318015 .. 3318047 -  -6.2  -2.74523   CCAGCGCCAATATGA      CGCTGTCAGGCAAG GCCGG CCTGCTTGACGGCA      GCGACCGCGAGGGGC  50 365
RTCIAT899_CH16415 3316736 .. 3316748 -  -4.7  -4.20025   AATCGGCAAGACAAA                GCCGG TCA CCGCC                GCAGTCTGAGCGAGC  62 62
RTCIAT899_CH16390 3312428 .. 3312440 -  -4.8   -3.4072   TAGCCCCTAGCACAA                TCGG CAAGT CCGA                CACACCCCCTACGGC  51 34
         hpt 3311722 .. 3311750 -    -3  -3.40522   ATCGCTGGAGCAGAA        TGGCACAGGCGG ACATG CCGCCTGCATTA        ACTCAAGATCAGGCC  47 34
RTCIAT899_CH16380 3311216 .. 3311250 -  -8.6   -2.5547   AGCCGGCACAGGAAG     TGACTGCGCGACAATT GAC AAATGTCAGGCAGCCA     AGGCCCGCGCAACAG  56 15
RTCIAT899_CH16350 3303937 .. 3303962 - -13.3   -4.4009   TCCGACTCGATAAAA         CACCTTCTCCC CGAG GGGAGAAGGAG          AAAATTAAATCCCCG 100 30
RTCIAT899_CH16315 3298010 .. 3298020 -  -5.4  -5.06451   GAGGACGGCAAAAAA                 CTCT CCA AGAG                 CATGGGCGATACCGG  85 69
RTCIAT899_CH16305 NONE
RTCIAT899_CH16300 3295778 .. 3295798 - -12.6  -3.21912   GCTGCAAGTGACCAA            TCTCCCCC CTTGT GGGGGAGA            TGTCCCGAAAGGGAC  83 88
RTCIAT899_CH16270 3289536 .. 3289573 -  -6.1  -3.14344   GATGCGCCGGAGCAA   GGAATGGGCGCCGCATG AGGC CATGCTGCTCGCCTCCC    CCTTCCGCAATCTCG  50 353
RTCIAT899_CH16260 3288636 .. 3288663 -  -7.6   -2.8372   GACGCCGGAGGAAAT        CGAGACGCTGGA AAGC CCCTACGTCCCG         CATGGGGTTGCCGGG  55 110
RTCIAT899_CH16250 3285351 .. 3285375 -  -9.2  -3.68222   CTGGAAGGGCAAGAA          GCGCTCGGCG CTCGT CACCGATCGC          CATCATGCCGCCTTT  68 453
RTCIAT899_CH16235 3282148 .. 3282166 - -11.7  -3.77119   TAGCAACGAACAGAA             TGCCGCC TTTGG GGCGGCA             TTTTTGTTTGCAACG  86 108
RTCIAT899_CH16225 3278186 .. 3278206 - -11.8  -3.54158   CACCTTAATAATGAA            GAGCCCGG AAAAA CCGGGCCC            TGATTGTTTGAATGC  81 47
        argJ NONE
RTCIAT899_CH16215 NONE
RTCIAT899_CH16210 3275728 .. 3275738 -  -6.8  -3.83323   GCTATAGAAGCTAAA                 GCAG ATC CTGC                 AGGAACGGGATCAGC  65 10
RTCIAT899_CH16200 3274549 .. 3274581 -  -3.3  -2.80816   TGCTCATGCACTATA      GCATTTCCGCTTTTC TTC GATGCGCGAAAACGC      TCTATTTTTTCTTAC  41 85
RTCIAT899_CH16195 3273856 .. 3273886 -  -8.2  -2.66272   CGCGACCGAAATCGA       GCTGACGGGCGG CGCAAGC CCGCGCGTCATC       CCCTTTGCCGATGTC  52 424
RTCIAT899_CH16185 3272388 .. 3272409 -  -5.2  -3.06991   CATGATGCCGAAAAG           TGTC-TGCG GTTTT CGCACGACA           TCATACTCTACTTGT  50 102
        grxC NONE
RTCIAT899_CH16175 NONE
RTCIAT899_CH16170 NONE
RTCIAT899_CH16165 3270043 .. 3270061 -  -8.8  -4.24948   TGAGGAGATCGAAAA             GCCGCTTG CGG CAAGCGGT             CTCGAGATCACCGCC  79 156
RTCIAT899_CH16155 3268422 .. 3268453 -    -5   -4.2349   GCCCGACATGCAAAA      TCGCCCTCCCGGTT CGGT AGCCGGAAAAGCGT       GATCTCAATGGGGCC  69 107
RTCIAT899_CH16150 NONE
        ptsP NONE
        prfA NONE
        hemK 3262432 .. 3262447 -    -6  -3.90112   CGTGCCGCAAGCAAA              CTGCGC TTTA GCGCCG               GTCTGCCGCTCGACT  63 254
RTCIAT899_CH16130 3261563 .. 3261588 - -19.1  -4.96848   CCCGCCATACAAAAA         GGAATGGCGGC TTTC GCCGCCATTCC          TGCATTCTCGCTTTA 100 68
        clpB 3258669 .. 3258688 - -11.4  -4.13767   CGGCCGATGGCAAAA            TGGCGGCC CGAA GACCGCCA             TCCGCATTCATTCAC  88 51
RTCIAT899_CH16080 3247709 .. 3247739 - -15.5  -3.34895   CTGATTTCTAACGAA       CCGGAAAGCGAGG TCATG CCTGGCTTTCCGG       TTGTCTGTCGGACCG 100 49
RTCIAT899_CH16060 3242441 .. 3242452 -  -4.4  -3.19642   ACCAGGACGGAGTAA                CGAA ACTC TTCG                 TGATAGCGCTCCAAA  49 78
RTCIAT899_CH16055 3241569 .. 3241580 -  -3.6   -2.9039   ATACTATGTCACAGA                CGAC AAGC GCCG                 AAACTCAAGAGATGT  44 119
RTCIAT899_CH16050 3239573 .. 3239592 -  -8.6  -3.37056   AGCAGTGATGGACAA            GGC-GCTTG ATG CAAGCAGCC            CGACGCTGGCAGGCA  59 410
RTCIAT899_CH16040 3238579 .. 3238623 - -14.3  -3.79864   GCGAGACAACAAAGA GATGGAGCGGTTCAGAGATTC CCT GAAAAACTGAACCGCTCCAGC AGCACCATTAGGCCG 100 33
RTCIAT899_CH16030 3234791 .. 3234819 - -12.5  -3.53012   TCTCCCCCGCGGAAA        TACCGTCAATCGC GCA GCGATGGACGATA        TCGCCGCAACGTCCG  79 412
RTCIAT899_CH16020 3232346 .. 3232377 - -10.1  -3.77553   CAACACCATCAAGAA      TGTCGGTGCGAAG TTCGAT CTGCGCACCGCCA       AGCTGCCGCTGATCG  76 512
RTCIAT899_CH15990 NONE
       msrA2 3226248 .. 3226260 -  -2.6  -3.13867   TGAGGCAGCAATACA                CCAG ACGCG CCGG                GAGTAACGAGCATTT  42 93
RTCIAT899_CH15980 3225226 .. 3225238 -  -5.5  -2.94354   CCATACACCTATATA                CGGAA GCA CTCCG                GATTCTATTCCATCG  49 67
RTCIAT899_CH15975 NONE
RTCIAT899_CH15970 NONE
RTCIAT899_CH15965 3223039 .. 3223078 - -16.5  -5.00616   GCTCTCCTCAAAAAA  GTTGCGCCTGCAGTATC GGCGCA GATACTGCAGGCGCGTC   ATGCGTCTCAACAAG 100 126
RTCIAT899_CH15950 3220065 .. 3220090 - -16.1  -3.93383   GGAATATATACGAAA         CGCGCCGCGCC AGCC AGCGCGACGCG          AAGGCCTGAAAAGGC 100 44
RTCIAT899_CH15945 3219291 .. 3219346 - -18.7  -3.63228   TCGAGCATAAAGGAA GCCTGATAGATTACGAGTGACGA TTTTCAATTT TCGTCACTCGTAATCTATCAGAG TGCCGATGTCAAGAA 100 191
RTCIAT899_CH15940 3218647 .. 3218672 -  -8.1  -2.92714   TCGAACAAAAAGTGA         GCGCACGCCGG GCAT CCGGAGCGCGT          TGTTATTTCTTCAAA  59 28
RTCIAT899_CH15935 3217482 .. 3217493 -  -7.2  -2.53822   GTCAGCGTACAATAT                CCGC CGAG GCGG                 CGTTGATTTCTGCGG  53 0
RTCIAT899_CH15930 3214240 .. 3214270 - -21.4  -3.57561   TCTGAACGGTTCAAA       CAAATATCCCGGCT CGA AGCCGGGATATTTG       TTTCTTTCAGGCGCC 100 41
RTCIAT899_CH15905 3209059 .. 3209101 -  -6.3  -3.62096   TCCTACGAGGCGAAA TATCTCGACCAGCATGGCGCC GTC GTCACCGTGCCGG-CG-GATA TTCCGGCCGGGACGG  57 301
RTCIAT899_CH15880 3204401 .. 3204413 - -10.5  -3.32023   TCCATATAAGCAATA                CGGGC GAA GCCCG                CCTTTCCTGATAGTT  73 147
RTCIAT899_CH15875 3203030 .. 3203053 -  -8.1  -4.21194   CCCGATCATCCAAAA          TGCTGTCGC GCTTTT GCGACAGCG           GAATGCTGAAAACCG  77 70
RTCIAT899_CH15870 NONE
        hisD NONE
RTCIAT899_CH15860 NONE
RTCIAT899_CH15855 3200040 .. 3200066 -  -2.9   -3.6471   GCGGAAACTACACAA         TCGCCGCGGTT TTGTG AACCACGTTGA         TAAGGGTTTCTGCAT  51 58
        infA 3199677 .. 3199733 -  -7.9  -2.90392   CATGCGGGAATGAGA GCCG-GCTCCGGAGCATGATGCCG AAAATATCGG CGGCATCCGGCTCCAGCGAGCGGC GGACTACTTGAAACG  56 29
         maf NONE
RTCIAT899_CH15840 3198769 .. 3198790 - -10.2  -3.82261   CGCGAACAAAATGAA           GAGGTTCG CAATAT CGAACCTC            TTGGAAAACCTCATT  80 40
RTCIAT899_CH15830 NONE
RTCIAT899_CH15825 NONE
RTCIAT899_CH15820 3193398 .. 3193429 -  -5.6  -3.93262   GCCGAAGACATGAAA      CGGAGATAGAGGCG TTTA CGCCGCGAGCGCCG       AAGACCGTGGATGCA  63 9
RTCIAT899_CH15785 3186179 .. 3186191 -  -4.7  -3.40597   TCCTTTATCGAAACA                GCGCC CTT GCCGC                CATCCGGATCAAGCG  51 48
RTCIAT899_CH15780 3185198 .. 3185222 - -10.2  -2.80796   TTTTATGAGTTAAAT          TTTTTGCTCA CGCCT TGAGCAAAAA          TTCGGCAACTGCCTC  66 8
RTCIAT899_CH15775 3183655 .. 3183688 - -11.6  -4.86731   CCGGCTGAAACAAAA     GGGCCGCCAAGGGC AGTTCG GCGCTCGGCGGCCT      AGAGGAAAGCAGTGC 100 80
RTCIAT899_CH15770 NONE
RTCIAT899_CH15765 NONE
RTCIAT899_CH15760 3180824 .. 3180863 -  -5.4  -3.10612   GCGAACCGGAACAGA  TGCGTCGGCCGTGCCCGC TCCA GCGCACACGGCCTTGGCC   TTTAAGCTGAAATCG  50 27
RTCIAT899_CH15755 3179204 .. 3179229 - -11.8   -4.3208   CGGGACAATGGAAAA         CGGCCGGAAC AGGAGA GGTCCGGCCG          TTCGAAATTATTCCG  93 33
RTCIAT899_CH15750 NONE
RTCIAT899_CH15745 3176677 .. 3176716 -  -4.3  -3.38581   ATGAATTCGCAAACA TCAC-GCTGTCGCTGCCGC CGCA GCG-CGCCAACAGCCGTGA  AAATCTTTCAGCCCT  49 167
RTCIAT899_CH15735 3174799 .. 3174817 -  -5.2  -3.01712   TGGCTCCGGGCAAGA             CGCCCGAC GAA GTCGAACA             CCGGCTTATGAAGAT  46 239
RTCIAT899_CH15725 NONE
RTCIAT899_CH15720 3172656 .. 3172676 - -12.6  -3.24747   GCTCCAGATTACCAA            TCTCCCCC CTTGT GGGGGAGA            TGTCGCGATAGCGAC  83 88
         tal 3169958 .. 3169981 - -12.4  -5.27335   GTCTTCAAATAAAAA          GGGCGCCGCA TCCC TGCGACACCC           TGACGAATCATAGCT 100 70
RTCIAT899_CH15690 3166875 .. 3166899 - -12.1  -4.87803   GAGTGGCAAATAAAA          GGAGGCCCCGC AAC ACGAAGCCTCC          GATAGCGAAAAACGG 100 43
RTCIAT899_CH15685 3166134 .. 3166146 -  -5.5  -2.80307   TAAATCGTCACCACA                GCCTA GAT CAGGC                TCGCCCCAACGTTTA  47 15
RTCIAT899_CH15680 3165655 .. 3165670 -    -9  -2.91695   GGTAGCCCCAAAGCA              TCCACG ACGG CGTGGA               TCTTGGTGCCTAGCC  62 35
RTCIAT899_CH15675 3165237 .. 3165277 -  -3.9  -3.74454   GTAAAAACAAGAAGA  TAGAGCGTTTTCGCGATTC GAA GAAAAGCGGAATTGCTCTA  GGCTATGGTGACGAT  53 45
RTCIAT899_CH15635 3156805 .. 3156840 - -15.4  -2.60511   GACGGATAAAGAGAT    GCCAGCCGCAGACGAT AGCG AGCATCAGCGGCTGGC     CGATCTTGCTGAGAT  78 296
RTCIAT899_CH15615 3152972 .. 3152995 -   -11  -3.61764   CCACTAATCGGGAAA          GCCGC-CCCCA TGA TGAGGTGCGGC          TTCATCACATCGATC  79 39
RTCIAT899_CH15595 NONE
RTCIAT899_CH15590 3147346 .. 3147366 -   -14  -4.99134   ACCCCAAACGAAAAA            GGCCCCTC GCGAG GAGGGGCC            ATGCCTTGGGAGCAT 100 54
RTCIAT899_CH15585 NONE
        xylB 3144629 .. 3144681 -    -9  -2.64933   TAGGGACGGACAGCA GTTGCCGCCATCCCCTTCTCCCCGT CAAA ACGGGGAGAAGGGGCCCGCC-CTTC GACAAGCTCAGGAGG  59 71
        xylA 3143139 .. 3143167 - -21.1  -3.53012   GCGTTTCGGCTGAAA        TCGGGAGGCGATG AAC CACCGCCTCCCGA        AGATGTCGATCAAAC 100 35
RTCIAT899_CH15560 NONE
RTCIAT899_CH15555 NONE
RTCIAT899_CH15550 3137919 .. 3137940 - -18.7  -5.13473   ACCACAGTTAAAAAA           CGCCCGCCG AAAT CGGCGGGCG            CCCTGGAAGATCAAC 100 51
RTCIAT899_CH15545 3136654 .. 3136667 -  -2.3  -2.78463   AGGGTTTGGATTACA               GCCCA AGCA TGCGC                CGGTTGGCCGCCTGG  39 7
RTCIAT899_CH15540 3135199 .. 3135231 - -21.4  -3.61398   CTGCGGCCTGAACAA     GCAGGCCCGAGGCGG TTCA CCGCCTCGGGCCT-C      ACATAAAGCTTAGAG 100 35
RTCIAT899_CH15530 3133156 .. 3133170 -  -3.5  -2.98823   TTCGGGCGACAGACA               CCCTC CCCTC AAGGG               CCGAAGCGCATCAAA  44 36
RTCIAT899_CH15525 3132445 .. 3132456 -  -2.2  -3.63895   CGCAATGACCTGAAA                GCTG CTCC CAAC                 GCCTTTTCTCCTTGG  50 135
RTCIAT899_CH15520 3129849 .. 3129861 -  -3.3  -3.14344   GACCGCCTTCATGAA                GCAGC AAG GCTTC                GACGAGGTCTATCAC  45 409
RTCIAT899_CH15505 3126616 .. 3126659 -  -5.8  -3.61894   AAGTTGGCGCAAGAA CGTCCGCAAGGCGCTGCGAG CGCT CTCCGAATGCCATGCGGAAG CGGCCCACATCGAGA  57 435
RTCIAT899_CH15490 3124789 .. 3124812 - -13.8  -4.69664   CACATCATGCAAAAA          GGCGCGCGGA AAGC TCCTCGCGCC           TTTGAAATCGAATTC 100 55
RTCIAT899_CH15485 3123982 .. 3124004 -  -3.3  -3.30701   GCCGATCAAAGGCAA           CCGGCCCTG TCAGT CAGAGCTGA           ACTTTGGCGCCCGCA  45 16
RTCIAT899_CH15480 3123338 .. 3123375 -    -4   -4.4078   GCTGTCGAACGAAAA   GTTCAGCGCTCGCGAA GCCTGG TCCGCGATCGCCGCAG    TCGGCCTGCGCCCCT  65 348
RTCIAT899_CH15460 3119127 .. 3119143 -  -5.7  -3.51837   ACAGAATCAAGAACA              GCGGCCA TCT CGGCCTC              CCGTGCCCAATACCG  57 130
RTCIAT899_CH15455 3118490 .. 3118515 - -12.5  -5.30616   GCAGCCAAATAAAAA         GGCCTCCGTCC GGAC GGGCGGAAGCC          TTATGATACTTCGGG 100 54
RTCIAT899_CH15420 NONE
RTCIAT899_CH15415 3109483 .. 3109500 - -11.3  -2.87132   TTTCCTCTTGAGATA             CGGTTCG GCAC CGAACCG              CTGCTAGCGAGCTTT  71 29
RTCIAT899_CH15410 3108454 .. 3108468 -  -9.2  -2.70932   TGCGGCTGGCAAGGA               GCGACC TGC GGCCGC               TCCGTATCAGCAAAA  60 51
RTCIAT899_CH15400 3106189 .. 3106205 -  -4.3  -3.28497   GCAGTTTAAATGGAA              GCTCGAC TGT GCCCAGC              ATCACGCTGGCATAA  49 125
RTCIAT899_CH15395 3103602 .. 3103633 -  -7.3  -4.07687   AGCTCGTCCTCAAAA      GCTGCGACATCCC GCAAGG GAAATACCGCAGC       CAATTTCCTCTACCG  74 153
RTCIAT899_CH15390 3103269 .. 3103300 -  -4.5  -3.64609   CAGAATCATGGGAAA     GCGCGGA-AGATCGG CCCG CC-ATCTGTCAGCGC      TGTTATATCAGCGCA  55 33
RTCIAT899_CH15385 NONE
RTCIAT899_CH15380 NONE
RTCIAT899_CH15375 3100204 .. 3100215 -  -7.2  -3.41302   CTAAGAGCGGAAACA                CCGC CCTT GCGG                 GTGCAGCGGCAGCCT  61 39
RTCIAT899_CH15350 NONE
RTCIAT899_CH15345 3093662 .. 3093683 -  -2.9  -2.76696   CCCTGCGGCAAGAAC           GATCCCGAC CGCG GCCAGCATC            AGTGTGCCACGGCGG  41 24
RTCIAT899_CH15340 NONE
RTCIAT899_CH15335 NONE
RTCIAT899_CH15330 NONE
RTCIAT899_CH15325 NONE
RTCIAT899_CH15290 3078169 .. 3078182 -  -2.3  -3.92178   AGTATGCCAAGGAAA               TCTGG AGAG CCGGA                TGAAAAAGCCGAAAG  54 163
RTCIAT899_CH15250 3063482 .. 3063507 -  -4.6  -3.18681   CGGGAAGGGCATCAA         GCCCGGCAGCC AGAAA GGC-ACCGCGC         AATTGCCGATCGACG  48 247
RTCIAT899_CH15240 3062628 .. 3062642 -  -4.2  -3.33744   CGCGTCCCGAAAAAT               TCGAGC GCA GGTCGA               GAATAGTAGTCTTTT  51 144
RTCIAT899_CH15235 3062163 .. 3062186 - -15.4  -3.66908   TTCGCTGAAAAGCAA          GGCCTTTCGA GAAA TCGAAAGGCC           TTTTTCATTTCTTAT  95 119
RTCIAT899_CH15220 3060317 .. 3060330 -  -6.7  -2.83715   CCGACCATCACCATA               GCCAA ACGC TTGGC                AGATTCTGTTCGCTC  52 144
RTCIAT899_CH15215 NONE
RTCIAT899_CH15210 3059158 .. 3059175 -  -4.1  -3.74747   CCAATGCCTATGAAA             TTGAGGC AGAA GCCTGAA              GGACTTAGCGGGATA  53 30
RTCIAT899_CH15190 3055658 .. 3055668 -  -5.4  -4.36914   TCTTTTTGCAGAAAA                 TCAC CGC GTGA                 ACCGCAGATGAACGG  69 201
RTCIAT899_CH15185 3054941 .. 3054972 -   -13  -4.71223   CGATAACACACAAAA      TGAAAGCGGCGCCCC GAT GGAGCGCCGCTT-CT      TTTGATCTTGGGAGG 100 77
RTCIAT899_CH15175 3052868 .. 3052884 -  -5.1  -4.41616   AGCCGGCGAAATAAA              TCCGGAT CTC ATCCGCA              TGATTGGAAAGGCTT  70 70
RTCIAT899_CH15170 3052126 .. 3052142 -  -5.8  -4.72272   CGGCGGCACCAAAAA             CGGCTGC TGGT GC-GCCG              AGGCGATCGTCATCT  76 508
RTCIAT899_CH15160 3050968 .. 3050982 - -12.8  -2.57132   CTTCCCTCCGATAAG               GCCCGC GTC GCGGGC               GCTTCTTCGTCCCGC  75 148
RTCIAT899_CH15155 3046071 .. 3046089 -  -5.9  -4.65895   TTCCTCACTCAAAAA             GGGGAGC TCACG GCTCCCG             TGCCTGAGGGTCATC  75 161
RTCIAT899_CH15150 3044536 .. 3044568 - -18.5  -3.72494   TCAAGCGAATAAAGA      GAAAGGCCGGGTTCA TGT CGAACCCGGCCCTCC      GACATTGCCGAAATG 100 50
        galU 3039154 .. 3039173 - -12.8  -2.57013   GTTCAAGCGAATCGA            GGCCCGGC ATAT GCCAGGCC             TCACCATATTTCCCG  75 156
RTCIAT899_CH15115 3036367 .. 3036386 -    -7  -3.14931   GGTAGTCGCCAGCAA            CGGCCGCG AGCT CACGGTCG             AACCGGTCTGATCAG  54 37
RTCIAT899_CH15100 3033589 .. 3033632 -  -2.5  -3.86194   AATGGCGGCGAGAAA TTCAC-CCACATTCCCTGTC TCAAC GACAGCGAAGACGGCATGAA CGTGCTGGAGAAGGT  54 105
RTCIAT899_CH15050 3021595 .. 3021631 - -13.8  -3.65426   GTAGAAACGGCCAAA   GCAAGGAGGCCAACGGC TGCT ACC-TTGGCCACCTTGC    TAAATAGGTTAGAGC  89 271
RTCIAT899_CH15045 3019707 .. 3019724 - -12.7   -4.8622   TTGCCGAATCAAAAA             GGAGCCC AAAC GGGCTCC              CGAAGCGATGACGGT 100 50
RTCIAT899_CH15040 3018817 .. 3018828 -  -4.4  -2.52017   GCCAAACTGAAAATG                GTTG TTTT CAAC                 TGGTCTGAACAACTG  43 49
RTCIAT899_CH15035 NONE
RTCIAT899_CH15030 3017039 .. 3017055 -  -4.3  -4.56597   TCCGGTGGCGAAAAA              GCAGCCA TAG CAGCCGC              AGCGGCCGATGACGC  71 142
RTCIAT899_CH15020 NONE
        ilvE 3013759 .. 3013773 -  -2.1  -3.84406   TGGTCATCATAACAA              CTCCGA TGTT TCGG-G               TGACTATGCGAACTC  52 207
RTCIAT899_CH15005 3012791 .. 3012815 -  -2.2  -2.73875   GGTGCCGCAAGACGA         CTTC-CCAAGC GTGG GCTTGATGAAA          TTACGCGTCCCTCAA  39 37
RTCIAT899_CH15000 3011169 .. 3011208 -  -3.6  -4.25104   CGCTTTCGAGCAAAA  CAAGCCGAA-AGATTAACG CTC CCTTCACCAATTCGGCTTG  ACCTTGCGCGCCATT  64 493
RTCIAT899_CH14980 NONE
RTCIAT899_CH14975 NONE
         pyk 3007863 .. 3007884 - -13.7   -5.4505   GGCTTCAAGAAAAAA           CCCGCCGTC TTTC GACAGCGGG            TTTCGGATGTTTGAG 100 67
RTCIAT899_CH14965 3006778 .. 3006793 -    -4  -3.47349   TTCTTAAATCGATAA              GCTGCAG TTT CTGCA-C              ACTCAATAGTCGTTT  51 150
RTCIAT899_CH14960 3005898 .. 3005908 -  -2.4   -3.2794   CGGCAGGCATATCAA                 CGGC GAC GCAG                 TGATCGCGGTCACCT  44 97
RTCIAT899_CH14935 3002392 .. 3002409 - -12.7  -3.05463   ATCGCCGCCATGGAA             CGGCTGG CGGG CCAGCCG              CGTGACCTGCATGAG  72 109
RTCIAT899_CH14900 2997777 .. 2997788 -  -5.8  -2.53677   AATGAAGGCACGAAG                CGCA TTTA TGCG                 GTCAACAGCCGCGGT  45 429
RTCIAT899_CH14890 2996701 .. 2996716 -  -3.2  -2.52742   AGGCGCTGACAACAT              GGACCG CTAT CAATCC               TCAAACCGTGGCGCT  40 19
RTCIAT899_CH14885 2995426 .. 2995440 -  -6.4  -3.71378   TATGGCAGACGCAAA               CTGACC TCA GATCAG               CTCCGCCGAGGCTCA  60 65
RTCIAT899_CH14880 2994415 .. 2994451 - -13.9  -3.76775   TTGAAGAGACGGAAA    GCACAAAACAGCCCGTT GGG AACAGACTGTTTTGTCC    CTCTAAAAGGCGAAT  89 52
RTCIAT899_CH14875 NONE
RTCIAT899_CH14870 2991990 .. 2992000 -  -6.8  -3.78775   CTCGTTATGATGAAA                 CCGA CCG TCGG                 CGCCCGCGTCAGCTA  63 289
        rpmE 2987867 .. 2987883 - -11.5  -5.17576   TATCAACGCAAAAAA              GCCCGGC AAA ACCGGGC              TCTTTTCAAGCGGCA 100 54
RTCIAT899_CH14820 2982720 .. 2982736 -  -2.9   -5.0538   GTCGACGTCAAAAAA              TCTGCCG GTA CGGTAAA              TGAAGTCTTGCTGTC  78 132
RTCIAT899_CH14785 NONE
RTCIAT899_CH14780 2971953 .. 2971979 -  -5.1  -4.08767   TTGATTGCCCGAAAA        GATC-TGCTGCG TCTG CGCAGCGCGACC         AATCGCGCCGAACTC  61 473
RTCIAT899_CH14770 2969426 .. 2969467 -  -8.6  -3.61398   CGCCTCGGTCAATAA TCTCCGCGCGATTGCCGG TATCAT CCGGCAATCGCGCTCTCA  TTCATGGCGGACGCC  65 23
RTCIAT899_CH14755 2966764 .. 2966788 -  -5.7  -3.14344   TAGCCTGCCGATCAA          GCAGATCCA TGATCGC TGGATCAGC          GCCTATGCCGGCCAT  50 116
RTCIAT899_CH14745 2965877 .. 2965904 - -18.4  -3.18839   ATCCGGAAACAGATA        GGCCCGGCACCG AAAT CGGCACCGGGCC         ACTGACCGATAGCCA 100 89
        lpiA NONE
        atvA 2961455 .. 2961486 - -12.2  -3.92522   GGGGAAGGTGAGAAA      GGGCGCGCGGCAGCA AGA CAC-GCCGCGCGCCA      TGAGCACATTATTCG  90 34
RTCIAT899_CH14730 2960587 .. 2960604 -  -4.1   -3.8901   TTGCAAAGCACGAAA             GCGAC ATGCCGTG GTCGC              GGAAAGGAGCGGGCT  56 44
RTCIAT899_CH14725 NONE
RTCIAT899_CH14720 2958970 .. 2958986 -  -4.3  -2.92858   GCAAGGACAGGAAAT              CGCGGCA TCA TGCCACC              CCTCAAGCCTGATAG  46 144
RTCIAT899_CH14715 NONE
RTCIAT899_CH14710 2957220 .. 2957243 -   -16  -4.78149   CCCATAACGCAAAAA          GCCGGCCGCA TCGC TGCAGCCGGC           TTTTCTGAATGATCG 100 48
RTCIAT899_CH14695 NONE
RTCIAT899_CH14690 2953824 .. 2953843 -  -3.5  -2.82862   ATGAACGAGCGAAAT            GCCGC CGGATCGATT GCGGC             CGGACTTTAGTCGGT  43 32
RTCIAT899_CH14685 2953252 .. 2953301 -  -7.2  -3.27704   ACTTTCGAAAGCGAA CGGTCTAATCCGGTGAGCCGATCCA GCC CGTA-CGGCTCACCGGG-C-GACCG GCGGGCTCAAGCCAC  59 32
        ruvC NONE
RTCIAT899_CH14670 NONE
RTCIAT899_CH14665 NONE
        ruvA NONE
        ruvB NONE
RTCIAT899_CH14650 NONE
RTCIAT899_CH14645 2947491 .. 2947507 -  -3.6  -3.32521   AGCAGAGCCGCACAA              GCCCGA TGAAG CCGGAC              ATTCGCCAAGGCATT  49 98
        ybgC 2943046 .. 2943066 -   -14  -3.75332   ATCCCCGAATCCAAA            CGCCCGGT GCTAG ACCGGGCG            GCTAAAAGTGATCTC  95 400
        tolQ NONE
RTCIAT899_CH14615 NONE
RTCIAT899_CH14610 NONE
RTCIAT899_CH14605 2940158 .. 2940179 -  -3.7  -3.21099   GCCTTTCAGCATTAA           TTCGTCACAG AGC CGGTG-CGAA           GTTAAGGCTAACTTC  47 8
        tolB 2938812 .. 2938851 -  -2.7  -3.28791   ACTTTGCGGCGATAA  CGTGGCGGCC-CTTCCCG CTACT CGAGCAGCGGCGACCATG  CCGGGTCGGAAGCGA  45 3
RTCIAT899_CH14595 2938098 .. 2938114 - -10.8  -4.42765   GGTCAAAAAAGTAAA              GGCGGC ACGAG GCCGCC              TTTTGCATTCCGATT  93 53
RTCIAT899_CH14590 NONE
RTCIAT899_CH14585 2935544 .. 2935564 -  -8.2  -2.80796   CCCCAGCACTGAAAC            TCCCGCCG TCAAG CGGCGGTA            TTACTTGATCCCTAA  57 99
RTCIAT899_CH14580 2933521 .. 2933547 - -13.1   -4.7254   ACCTTTCAGCAAAAA        GGCCAGCCGCAT TTTC ATG-GGCTGGCC         TTTCAATTTCGAGGT 100 57
        glmM 2931805 .. 2931826 - -13.7  -4.00132   AAACTGAAAACACAA           TGGCCGCCC GATA GGACGGCCA            TGCTATTTATTCGCA 100 59
RTCIAT899_CH14565 2929982 .. 2930016 - -15.1  -4.84527   GGGATAGAGGAAAAA     CAAAAGCCGTCCGGC GAGAA ACCGGACGGCTTTTC     AATAACTTGAATGGA 100 47
RTCIAT899_CH14560 2928829 .. 2928840 -  -2.2  -3.05384   GCCGGCTGCAGCGAA                CGAC GATG ATCG                 GCTGGCGTCGCGACT  41 152
RTCIAT899_CH14550 2926724 .. 2926742 -  -6.7  -3.57119   CATAGACGCCTCAAA            CCTCAGGC AGCA GCCTG-GG             AGAGCGTCGCCTTCT  60 9
        serA 2924893 .. 2924928 - -25.6  -3.23216   CCTCACGACCATGAA    GAAAGCCCGGCGCAAC TTAT GTCGCGCCGGGCTTTC     GGATTGGCTCTTGGG 100 86
RTCIAT899_CH14540 NONE
       cdsA2 NONE
RTCIAT899_CH14530 NONE
RTCIAT899_CH14525 2922082 .. 2922094 -  -4.1   -4.1399   GGACGGATATAGAAA                GGATT GCC AACCC                ATGCAAGGGGTGGGC  60 52
        trmU 2920525 .. 2920552 -  -6.2  -3.72765   AATGCAAAGGTCAAA        CGAACTGTCGCT CGAA AGCGCTAGCTCG         TCGGTTGAGCGGCTT  60 121
RTCIAT899_CH14500 NONE
RTCIAT899_CH14495 2916157 .. 2916174 -  -2.7  -3.96148   CTTGGCGAGCATAAA             CGGTCGAT CAT ATCG-CCA             TCGTTGCCCAACAAG  56 368
RTCIAT899_CH14480 2912989 .. 2913004 -  -6.8  -3.33696   GCCTCCTTGAATGAA              GCCGGA AAAC TCCAGC               CTCCGCTGGTCCAGA  58 351
RTCIAT899_CH14455 2909283 .. 2909295 -  -3.5  -2.53022   CAAACTATTAAAATC                TAAAA CTA TTTTA                TGGGTATGTGACCTA  42 38
RTCIAT899_CH14450 NONE
RTCIAT899_CH14445 2908066 .. 2908077 -  -7.2  -3.28924   CACTCTCGCCCACAA                CGCC TATG GGCG                 TCCGGATGAATATCC  59 417
RTCIAT899_CH14430 2906712 .. 2906731 -   -10  -3.07013   GATCTTGCCAACAGA            GGCAG-GCG ATT CGCCCTGCC            AATGACGGAGAGAAT  67 391
RTCIAT899_CH14405 2904299 .. 2904313 -  -2.8  -3.09327   CGAGGCGATCCAATA               TCATTC GAT GGATGA               GATCAATCAGGCCTC  43 32
RTCIAT899_CH14400 NONE
RTCIAT899_CH14395 2901923 .. 2901939 -  -6.5  -2.72144   CCAGCGCTTCGAAAC              CGGCG TCATGAT CGCCG              TCGTCATCGTGCTGA  50 237
RTCIAT899_CH14370 2897591 .. 2897620 - -19.3  -2.74605   GCCGCTGAAAATGCA       GAAGGCCCGCGGG CGTG CCGGCGGGCCTTC        CTTAAACGGTCTTTC 100 46
RTCIAT899_CH14360 2895510 .. 2895527 - -14.1  -3.03214   AGTTGAACGACAAAC             GCCCGCC ATCT GGCGGGC              TTTTGCTTTCATTGA  91 52
RTCIAT899_CH14340 2889450 .. 2889460 -  -2.4  -3.85698   TCTCCGGCGGAGAAA                 CGAC GGT GACG                 CTGAAAGGCAAGGGC  54 353
RTCIAT899_CH14330 2887775 .. 2887807 - -12.7  -2.88663   ACTCAGCGCGAGAGA      GGAAACGGCGATGGC GCG GCCATCCCCTTCTCC      CCGTCAAAACGGGGA  79 78
RTCIAT899_CH14310 NONE
RTCIAT899_CH14305 2882830 .. 2882866 - -22.5  -3.07816   CCCTGATGCACGCAA    CAGATCGCCGCTTCTGT GGC ACAGAAGCGGCGATTTG    ACACGTCCGAGAGAT 100 52
RTCIAT899_CH14300 2881383 .. 2881417 -    -7  -3.14931   GCCATGGTTGACGAA     GGCGAGGCATTGCTTT CGG AAGGCATTGCCGCGCG     AGCCAGCGATATCGA  54 134
RTCIAT899_CH14255 2870171 .. 2870183 -  -4.7  -3.60201   TGAAACAGAAGAACA                GCGAC ATC GGCGC                ATTTCATATCTCGCT  54 292
RTCIAT899_CH14220 NONE
RTCIAT899_CH14215 2860232 .. 2860255 -  -8.2  -2.57931   TCGACCCTGCACAAG          GTGC-TGCAGA ATA TCCGCAAGCAC          GAGATCTGAGGCAGG  56 87
RTCIAT899_CH14195 2855283 .. 2855296 -  -3.9  -2.79915   ATCTAGGGGACGATA               TTTGA AATG TCAAA                GGTTTGAACGTCAAG  43 52
RTCIAT899_CH14190 2854302 .. 2854324 -  -4.8  -2.57931   CCTATTCGGCAGAAG           TCTTTCGCTC AGG GATCGAAAGT           GTGTCGCGCGGGCAA  43 411
RTCIAT899_CH14150 2846236 .. 2846247 -  -3.6  -3.17941   AGGACACGCCATCAA                CGAC GGAG GCCG                 ATCTCTCCCGCCAGC  45 393
RTCIAT899_CH14140 2845088 .. 2845120 -   -10  -3.12847   AAGCTTGAGAGGCAA     GCCACCTTCTTCTCT ATTT AG-GAAGAAGGTGGT      GCCGATTGCGCACAA  67 41
RTCIAT899_CH14130 2843017 .. 2843027 -  -3.2  -4.63486   ATCGTCTCAACAAAA                 TCAG GGG CCGA                 AGCTCCGCGCATCCG  67 121
RTCIAT899_CH14125 2841732 .. 2841759 - -11.2  -3.05343   TCGAGACTTGGAACA        GCGGCCGG-GAGC TAA GCCCTCCGGCCGT        ATGAATTACTTGGCG  72 31
RTCIAT899_CH14120 2838378 .. 2838399 - -15.1  -4.58424   TATGAGTATAGAAAA           GGCGGGACC TTTC GGCCCCGCC            TGGCATGTCGAGTAC 100 65
RTCIAT899_CH14115 NONE
RTCIAT899_CH14110 2835401 .. 2835411 -  -4.6  -3.54676   AGCTACCCAAATTAA                 CAGC AAC GCCG                 CAATCCCTGCCGCCG  52 52
RTCIAT899_CH14105 2833209 .. 2833243 -  -8.4  -2.66787   CCAAGACCGAGACGA     CAGCGCCGGATGGACG CAG CGGCCATCATTCGCTG     GTTCCCTGGTTCATC  52 305
RTCIAT899_CH14095 2831100 .. 2831113 -  -8.1  -3.09015   GGGACAGGGAGCTAA               CGGAG ATAC CTCCG                CCGCCGATGATCGGC  60 394
RTCIAT899_CH14090 2829524 .. 2829540 -  -2.1  -4.07885   CAGCCGCGCCGAAAA              CTGCATC GTC GTTGCCG              ACAGCGCCAAGTTCG  57 215
RTCIAT899_CH14080 NONE
RTCIAT899_CH14075 2824999 .. 2825015 - -10.1  -3.15544   GCGGACCCTGATCAA              CCGCTCA GAT CGAGCGG              GCCATCTCGAAGGCG  65 259
         ung 2823364 .. 2823374 -  -2.4  -3.55563   ACGTCATCTCGGAAA                 TCCG GCG CGGT                 AATTCCCAAGCGATT  47 385
RTCIAT899_CH14050 NONE
RTCIAT899_CH14045 2821245 .. 2821281 - -17.3  -2.61695   CTCATCGGCAAATAG    CAGGCCACGCGGCAG GAGCTGT CTGCCGCGCGGCTTG    GTCATTTTTCGAGCT  90 40
RTCIAT899_CH14035 NONE
RTCIAT899_CH14030 NONE
RTCIAT899_CH14025 2818697 .. 2818709 -  -5.5   -2.7728   GCGAAAGGCCAATCA                CGAGG AAG CCTCA                CCAGTGCCTATCATG  47 36
RTCIAT899_CH14020 2818402 .. 2818412 -  -2.4  -2.82923   AAAAGAAAAACAGAT                 CGCC TCG GGCT                 TCGACGCTGCGGCGG  39 56
RTCIAT899_CH14015 2817528 .. 2817542 -  -2.7  -4.56597   CCGGCCCTCGAAAAA               CTCCG TTGCC CGGTG               CTTGCCATTCACGGC  66 206
RTCIAT899_CH13995 2813351 .. 2813366 -  -4.6    -3.137   ATCAAGAGCAGCTAA              CCAAGC TCGA GCGTGG               TGACGCCGAAGACGC  47 6
        purA NONE
RTCIAT899_CH13985 2809278 .. 2809296 - -13.8  -4.57482   TGACCGATAAAGAAA             GGCGGGCC AAA AGCCCGCC             TTTTCCATATCCATA 100 54
RTCIAT899_CH13970 NONE
RTCIAT899_CH13965 2805188 .. 2805211 -  -3.8  -3.81258   GCAAGAACACCCAAA          CTCG-CTGCCG CAT CGATAGTCGAG          AGTAAGGCAGATGAA  54 487
RTCIAT899_CH13950 NONE
RTCIAT899_CH13945 2802063 .. 2802084 - -11.6  -4.15698   TATGGATATAAATAA           TAGCCGCC TCAAAG GGCGGCTA            TCCTTGTTTCGATAG  88 53
RTCIAT899_CH13940 2801389 .. 2801408 - -13.6  -4.17296   GCCGACACACAGAAA            TCCCGCCT CTTC AGGCGGGA             TTTTTATTGGCCTCA 100 124
RTCIAT899_CH13930 2799724 .. 2799764 - -20.5   -4.4267   CCCGAAAATGCAAAA  GCTGCGCATGGCCGGCC CCGTCAC GGCCAGTCATGCGCAGC  TTTCAGTACCGCCGC 100 121
RTCIAT899_CH13910 NONE
RTCIAT899_CH13905 2795904 .. 2795918 -  -3.5  -2.88999   GGTCGACAGACGATA              GGC-CG TCAT CGCGCC               GCCTCCTTCGCCTTG  44 16
RTCIAT899_CH13900 NONE
RTCIAT899_CH13895 2792201 .. 2792225 -  -7.1  -3.14132   TGTTTTCGGCACGAA         GCCGC-CGGG TGTCTT CCCGCGCGAC          CGACCGTATTTGAGA  54 193
RTCIAT899_CH13890 NONE
RTCIAT899_CH13885 2788276 .. 2788314 -    -8  -3.93597   AAAAATGACACGAAA   GCGGCAGCCTCTGGCTCA AAA TTAGCCAAAGCCGGCTGC   TGCCGCTCCCAAATT  74 311
RTCIAT899_CH13880 NONE
RTCIAT899_CH13875 NONE
RTCIAT899_CH13870 NONE
RTCIAT899_CH13865 NONE
RTCIAT899_CH13860 NONE
RTCIAT899_CH13855 2782408 .. 2782426 - -17.4  -4.87626   CGCGAATATGAAAAA             GCCCGGCC AGT GGCCGGGC             TTCTCAGATCTTGCC 100 68
RTCIAT899_CH13850 2781312 .. 2781352 -  -4.8  -3.63097   ACTGCATAAACAAGA TAGAGCGCTTCCGCGATTC GGAG GAAA-GCGGAAATACTCTA  GATCACACGATCCGG  55 23
        ureD NONE
        ureA NONE
RTCIAT899_CH13835 NONE
        ureB NONE
RTCIAT899_CH13825 NONE
RTCIAT899_CH13820 NONE
        ureC 2776451 .. 2776466 - -11.8    -4.371   CGCAGCATATGAAAA              CCCCGG AAAA CCGGGG               CTTTCATATCTGCCC  93 64
RTCIAT899_CH13810 2775331 .. 2775348 -    -2  -4.22652   GCAGACCATGCAAAA             TTGTCGC CGCCC GCG-CAA             GCATCAATGACGTGT  60 48
        ureE NONE
RTCIAT899_CH13800 2774028 .. 2774049 -  -3.5   -3.1544   TGATAGCATAGCCAA           GCGCCGGGC GGCC GCACAGCGG            CGAATGACGTAGGCG  45 76
        ureG 2773371 .. 2773398 -  -8.3  -4.48299   GGATATGGAAATAAA        GACGGGGCGGC TCAAAG GCCGCCCTGTT         CCTTTAGGAAATCGA  83 9
RTCIAT899_CH13760 2763693 .. 2763725 - -13.3  -3.92542   TCGACCTGGAAAGAA      GTCACTGCGCCGCGC AAG GTGCAGCGCAGCGGC      ATCCCCGCCAGCGGG 100 182
RTCIAT899_CH13745 2759917 .. 2759942 - -11.8  -4.23723   TAACAGCATTCAAAA         GGCGGTCGCA GCTTGG TGCGGCCGCC          TTTTTCATAGCCAAG  93 120
RTCIAT899_CH13720 NONE
RTCIAT899_CH13715 2753602 .. 2753624 - -12.7   -4.5442   GTTGTAACGATAAAA          GGCCCGGTCG ATAG CG-CCGGGCC           TTTTCTTCGAGCATT 100 133
RTCIAT899_CH13675 NONE
RTCIAT899_CH13670 NONE
RTCIAT899_CH13665 NONE
RTCIAT899_CH13660 NONE
RTCIAT899_CH13655 NONE
RTCIAT899_CH13635 NONE
RTCIAT899_CH13630 2741392 .. 2741403 -  -4.4  -2.64155   TGCCTCCTAAATCGA                TGCA GTTC TGCA                 AATGCATGTATTACT  44 36
RTCIAT899_CH13625 2739870 .. 2739883 -  -5.2  -3.07962   TCCGATACGGCAAGA               CGGC ATCAAA GCCG                TCTTGCCGTTGTGAT  50 55
RTCIAT899_CH13620 NONE
RTCIAT899_CH13615 2737988 .. 2738000 -  -3.4  -4.56597   CCTCCTGCGGAAAAA                TCGA ATTGA TCGA                ACTTGCCATTCGTCG  67 84
RTCIAT899_CH13610 2736800 .. 2736818 -  -3.9  -2.78526   TGGCATAACATACCA            GTTGGACG GTTT CGTC-AAC             GACCTACTTGATCGC  43 85
RTCIAT899_CH13605 2736218 .. 2736240 -    -4  -2.57211   ATTGTCTCCGATAAG           GTTAGAGCTG CGT CAGCCCGATC           AACCGGTCGATCAGC  42 4
RTCIAT899_CH13600 2735744 .. 2735760 - -10.9  -3.65902   GTTATGCGATCCAAA              GCGCTTT GGG AAAGCGC              CGTACTTCAAGCCTT  76 123
        thuA 2734918 .. 2734930 - -10.5  -3.36505   ATACCTCAGCGATAA                CCGGC TTC GCCGG                CCTGGTGCAGTTTCG  73 3
        thuB NONE
RTCIAT899_CH13585 2732936 .. 2732949 -  -3.1  -4.12532   TTTTCCATACAGAAA               CAGGCC CGC GGC-TG               TCAACGGGCAGCAGC  58 43
        sycA 2731173 .. 2731187 -  -4.2  -2.61718   GAATCGGCAAAAATG               CGGC GAAATCT GCCG               ATCTCCAATCACTAT  44 193
        olsC 2729998 .. 2730024 -   -18  -5.27476   CTGAATAAAACAAAA         CCCCGGCCTCCC TCA GAGAGACCGGGG         TTTATGAAGCTAACC 100 52
RTCIAT899_CH13560 2724864 .. 2724892 - -15.3  -2.69964   TTCGGAAGTAGACCA        CGCGCCTGGTTTC GAC GAAACCGAGCGCG        GCATGAAAGGCATGG  83 57
RTCIAT899_CH13545 2721741 .. 2721752 -  -5.8  -3.35912   TAGCAGACACACGAA                CACC CGAA GGTG                 TCTATCAGGACGCGG  56 192
RTCIAT899_CH13535 2719376 .. 2719398 - -15.6  -3.23452   ATCGGCATAACCGAA           TCGAGCGGCC ACA AGCCGCTCGA           TATTTTTTGAGAGGT 100 54
RTCIAT899_CH13505 2714716 .. 2714753 -  -8.2  -2.66964   TGATGGACTAGACGA   TGTCCGGCGGCCCCTT TTTTTG ACGGGGCCGCGGGGCC    ATTGAGATCGTTCAA  56 37
RTCIAT899_CH13495 2712043 .. 2712062 -  -4.3  -4.07687   ACGCGCTGCTCAAAA            CCTATGGC GGCAG GCCA-AGG            CCGCGCAGCACGGAT  61 371
RTCIAT899_CH13480 NONE
RTCIAT899_CH13475 2708969 .. 2708993 - -11.4  -2.60901   ATAGCTCGAAGCAAG          GTGACCCGCC TCTCC GGCGGGTCAA          TTCTTCTCGGCGCCA  68 22
RTCIAT899_CH13465 NONE
RTCIAT899_CH13460 2705483 .. 2705497 -  -3.5  -3.53745   CATACCCGAAATCAA               GGGCA CGCGT TACCC               CGCCCCGTTCAATGA  49 431
RTCIAT899_CH13450 2703917 .. 2703938 -  -9.4  -3.68962   CGTCAAGATAGATAA           GGCCCGAT ATGAAG ACCGGGCC            TCATTTCTGCGAAGA  70 60
RTCIAT899_CH13445 2702896 .. 2702928 -  -9.7   -2.8194   GAACGACCGATGACA      CCGAGGCCGCGCGCT CGA AGCCCGCGGCCTTAT      CCCAACAAAACGTCC  64 470
RTCIAT899_CH13420 2697913 .. 2697938 -  -6.8  -2.64416   GATTGGGATGACAAT         TCTGCGGCCA AGCGCA TGGCCACAGC          TTGCGGCGCCCTCGC  51 44
RTCIAT899_CH13395 2694690 .. 2694702 - -10.5  -3.28712   CCCGCTCCGCCAGAA                CCGGC ACT GCCGG                TCATGCCCGAGCATC  68 247
        chvE 2692000 .. 2692028 - -18.2  -4.00532   GTCTTAAATATCAAA        GCCAGGGCTCGC ACTGA GCGAGCCCTGAC        CGCTATGTCGGAAGA 100 41
        gguA NONE
        gguB 2689148 .. 2689178 -  -4.6  -4.07885   GATTTGGTTTTAAAA       GCTGGGTTGATCGC TAA ACGATCAACCCTTG       TTCTTGTTGTAGACG  62 16
RTCIAT899_CH13365 2688020 .. 2688045 - -14.7  -2.76162   GATCGTATTGGAAAT         GCCCGGCCG ATCCCTTG CGGCCGGGC          TCGATGCATTACAGC  83 34
RTCIAT899_CH13360 NONE
RTCIAT899_CH13355 2684680 .. 2684714 - -18.7  -3.32946   GGCTCAAGTATAATA     GTAATCCCGGCACTC CTTGT GAGTGCCGGGATTGC     ATATGGCTTAATGAA 100 57
RTCIAT899_CH13345 2682719 .. 2682731 -  -3.3  -3.66288   GACCGTGGAATACAA                GCCAG GCA CCAGC                AACACGGAGACAACG  51 481
RTCIAT899_CH13325 2678244 .. 2678265 -  -9.4  -3.25942   ATTTCGGGATATGAA           GCCGGTCA TTGTCG CGACCGGC            CAACTGAGTGCCTCC  61 386
RTCIAT899_CH13300 2670273 .. 2670283 -  -6.8  -3.15212   AAGCAGGAGATCGAA                 GCCT GGA AGGC                 CGTTACCGTTTCCAC  54 117
RTCIAT899_CH13290 2668057 .. 2668085 - -14.5  -2.72144   GCACTGGCCCGAAAT        CGACAGCGAGCGC CAG GCGCTTGCCGCCG        CGTGGCCGGACAAGC  83 409
RTCIAT899_CH13280 NONE
RTCIAT899_CH13275 NONE
RTCIAT899_CH13270 NONE
        uraD 2664108 .. 2664129 -  -8.7  -4.19506   ACCTCAACGGGAAAA           CCCGCG-CTG GGA CAGACGCAGG           AAGGACGCAGCACTG  80 51
RTCIAT899_CH13260 NONE
       allA1 NONE
       uraH1 NONE
RTCIAT899_CH13245 2661911 .. 2661923 -  -2.7   -4.4648   ACTCCTATTACAAAA                CTTGT ACA ACAAA                TGGTACAGGTCCAGC  64 60
RTCIAT899_CH13240 NONE
RTCIAT899_CH13235 2661003 .. 2661022 -  -3.4  -4.21194   GTCGACGATGCAAAA            GCGGCTGT CGAT ACCGGCGC             CGATGCCATTATCGT  62 359
RTCIAT899_CH13215 2657004 .. 2657016 -  -9.1  -3.65542   CCTATCCTGAAAACA                GGCGT CAT ACGCC                GCGAATCCGCGCCTT  68 87
RTCIAT899_CH13205 2655496 .. 2655543 -  -4.6  -4.09739   GGAATGGTCTGAAAA TACGGAGGC-CACCATCGGCCGT TCG AAGGCCGTCGGCGAGCCGCCCTT CATGCTGCCGATCTC  61 354
        glpK 2649052 .. 2649081 - -12.2  -2.60257   ACACGGCATAACCTA       GGGTGAGCAGTC AGCAAA GACTGATCACCC        CTGCCGTGTACTCAA  72 20
RTCIAT899_CH13180 2648058 .. 2648070 -  -4.8  -3.13382   CATGAAACTCCAACA                TGCG TCAGC CGCA                GATTGATCGCCGGTG  47 50
RTCIAT899_CH13175 2647025 .. 2647041 -  -2.9  -3.34398   TTCTCCCTTTAAAGA              CGAAGGA ATA TCATCCG              GACCGACAGACCGCG  47 66
RTCIAT899_CH13170 NONE
RTCIAT899_CH13165 NONE
RTCIAT899_CH13160 NONE
RTCIAT899_CH13155 NONE
RTCIAT899_CH13150 2643778 .. 2643791 -  -2.3  -3.57144   TTTCGGATTCCGAAA               GAGCT CAGG AGCGC                GGGTCGTCCGATAGC  47 16
RTCIAT899_CH13145 2642754 .. 2642767 -  -4.5  -4.41348   CCGCGGGGAAACAAA               GACTG AGGA CAGCC                CGAAGGCCGACGAAT  68 157
RTCIAT899_CH13135 2640483 .. 2640500 - -14.1  -4.65895   TTCTCCATTGAAAAA             GGCCCCG TTCC CGGGGCC              TTTTGCCGTCAACCA 100 34
RTCIAT899_CH13125 2638590 .. 2638603 -  -3.1  -3.57561   GGGGAATGGTGGAAA               TCGTC ATAT AACGA                GCGGCGAAACCCCGA  49 15
RTCIAT899_CH13120 NONE
        engA 2636034 .. 2636048 -  -7.8  -3.65224   ACGCTATGGGAAGAA               GACGGC CAG ACCGTC               GGCGGTATCGGTGAA  64 343
RTCIAT899_CH13105 2634147 .. 2634181 - -11.4  -2.84794   GCAAGCCTACAAGGA     GTGAACTCCGGGCCGA TGA TCCACCCGGAATTCGC     TTACCGCGTCTCAAC  69 58
RTCIAT899_CH13065 2624163 .. 2624177 - -11.4  -3.05715   AAGCTCTGCAGGCAA               GCCGGT GGG ACCGGC               AAATCGAAGCTGATA  68 370
         tdk 2614797 .. 2614811 -  -3.5  -3.65827   GAACTGCTATCGAAA              GCCTGC ACGA GC-GGC               TGCTTCACTCGCAAG  53 30
RTCIAT899_CH13005 NONE
RTCIAT899_CH13000 2613214 .. 2613244 -  -6.1  -4.15703   TGGGACAAACAACAA      CCGTCCG-AACGGA ATTT TCGGTGACGGACGG       CAATCAACCCTCAGG  67 29
RTCIAT899_CH12995 2611846 .. 2611868 - -13.4  -4.08692   CAAGTGCTCTCAAAA           CTGAGCCCGG CAG CCGGGTTCAG           CGTCACTGTCCGCCT 100 68
RTCIAT899_CH12985 2609425 .. 2609436 -  -2.2  -4.55128   ATGGCGAAAGCAAAA                GCCA AGGA TAGC                 TGAGGCCGGGTCAAC  65 43
         fhs 2607010 .. 2607035 -  -2.5  -3.41602   GGGATCGGATGACAA         CAGTCCTG-GGT GCA ACCGCCGAACCG         GCACTTCCCGACCGA  45 63
RTCIAT899_CH12970 2605615 .. 2605625 -  -8.2  -3.26449   GGGCATAGAATTCAA                 GCCC GAA GGGC                 AAATGCGCTGCGAAG  57 473
RTCIAT899_CH12960 2602624 .. 2602646 -  -9.9  -5.24989   CGAGAGAGCAAAAAA          GAGGCGATGC CGAA GCATCGCC-C           GAGTTTGCTGCATCG 100 51
RTCIAT899_CH12955 2600354 .. 2600371 -  -4.9  -3.98256   GTTTCAGTAAAAATA             TTATTCC CAAA GGAACAA              CGACATTGAACACCG  60 384
RTCIAT899_CH12950 2597246 .. 2597280 - -16.6   -4.4715   TTTCAAGGCACAAAA     TAGCCCCATGCACC TTTTCCG AGTGCATGGGGCTA     GAAACATCCGAGCTC 100 53
RTCIAT899_CH12945 2596449 .. 2596474 -  -3.3  -3.57389   AAGATTAGGATACAA         CCTGAAGCAAGT CAA ACC-GCCTCAAG         GCAAGGTGTGGCTTG  49 21
RTCIAT899_CH12940 2595358 .. 2595377 -  -4.8   -3.2614   CACCTGTGACACCAA            GCGCGGCG GTCC CGTCGTGC             TCGGCCGCACCCACA  48 364
RTCIAT899_CH12930 NONE
        queF 2593124 .. 2593145 - -15.9   -4.4767   GCATCTAGCAGAAAA           GCCGCCATC TCCG GATGGCGGC            TTTTTCATTCAGCCT 100 34
RTCIAT899_CH12915 2591403 .. 2591434 - -17.2  -4.14739   TGATTCATCGCAAAA      CGCCCCCGCCAGCC TTCC GGCAAGCGAGGGCG       CTCAAATCAATAAGG 100 54
RTCIAT899_CH12895 2587521 .. 2587532 -  -2.2  -4.47707   CCGGATCAAAAAGAA                GCAA CCCC TCGC                 CTACTTCTTCAGCAT  62 26
        leuA 2585439 .. 2585466 - -11.2  -4.64676   TGATGTGCAATAAAA        GTGGTCCCCTCG ATAA CGAGGGGACCTT         TCGAATCAGAGCTGC  95 56
RTCIAT899_CH12860 2579758 .. 2579776 - -10.2  -4.07885   GAGCGGCTGGCAAAA             GTCGCCTG ACC CAGGCGCC             GGAGACTACCAGTAG  86 31
RTCIAT899_CH12850 2577434 .. 2577445 -  -5.8  -4.18367   GACGATACAGACAAA                GCCA TCGG TGGC                 ATCTCCGGCTACACC  68 432
RTCIAT899_CH12820 NONE
RTCIAT899_CH12815 NONE
RTCIAT899_CH12810 2567406 .. 2567448 -  -9.1  -3.15579   GCAATGCCGGATTAA TGTCCGG-AAGGCGGCCGCC GGTG GGCAGGAGACTTGCCGGACA GCGGAAACCTTTTCT  63 338
RTCIAT899_CH12790 2565345 .. 2565357 -  -3.3  -3.70902   GGCGCGATATCCAAA                CCAGC AAT GCCGA                ACACGGAGGCTCCCT  54 267
RTCIAT899_CH12775 2561499 .. 2561526 - -15.6  -3.46647   GCCACTCAGGAAACA        CAACTGGGGCAC CTTG GCGCCCCAGTCG         TCCGTCTCATTATTG 100 35
        petA NONE
RTCIAT899_CH12760 NONE
RTCIAT899_CH12755 2557180 .. 2557199 - -12.1   -5.5353   TATACCAACAAAAAA            GGCGGCC TCGACG GGCCGCC             TTTTTACCGAAACAT 100 49
         apt 2556520 .. 2556550 -  -5.3   -4.1891   GCTTTTGAATAGAAA       TCTGCGGGGCC GCTCGTGAT GGCCCCGCCCA       TCTTCCAGGCCGGTC  65 39
RTCIAT899_CH12735 2554241 .. 2554290 -  -6.5  -4.64861   TTGCGTTAAAACAAA GGGATAGAGCGCTTTTCGCTACTC GAA GAAAAGCGGAAA-CGCTCTATCGG AGCGCCGGCAATCTC  78 19
       clpS2 2552504 .. 2552526 -  -6.9  -2.87501   GCCTAGCAAATATTA           CCGTGCCTA TTCCT CAGGCTCGG           TCGTGAACATCAGCG  53 9
RTCIAT899_CH12695 2545437 .. 2545459 -  -4.8  -3.40622   TGATGGAAAAGAAAC           GTGGAAACCT GGA AGGCTCCGAC           CGGCCTCTTACATGG  51 82
RTCIAT899_CH12690 NONE
RTCIAT899_CH12685 2542194 .. 2542212 - -10.2  -2.57931   GCGATCGTGGACAAG             CGCCGTGA TCG TCCCGGCG             AATCCGAGGTCATGA  60 497
RTCIAT899_CH12650 2535883 .. 2535906 - -13.9   -4.8048   TTTTCAGAGGAAAAA          GGCACGGCA AACGGG TGCCGTGCC           GATCTTCAAACGTAA 100 49
RTCIAT899_CH12645 NONE
        proC NONE
RTCIAT899_CH12635 2533503 .. 2533531 -  -5.9  -2.53249   CGGGATAGAATATAC        CGACGGCGCCA GGCATTT CAGCGTCGTCG        TCACCAATGGCAATT  45 330
RTCIAT899_CH12600 2528016 .. 2528031 -  -7.5   -3.7795   CGAAATGTTAGCAAA              GCGGC TGGATG GCCGC               TAGCAAGCGAGCGGA  68 48
RTCIAT899_CH12570 2522227 .. 2522246 -   -15   -4.8048   CCTGGATACGAAAAA            GCCCGCCA TCTC TGGCGGGC             TTTCCATGTAAGCTA 100 52
RTCIAT899_CH12560 2520467 .. 2520484 -  -6.3  -4.10657   TTACACCGCCGAAAA             GCGTC-AC TTC GTCGACGC             AATCATAGAAAAGGC  65 59
RTCIAT899_CH12545 2517924 .. 2517949 - -15.5  -2.80988   TGATATCAGCAAGGA         GCCCTCGCAAC CTGG ATTGCGAGGGC          TTTCCATATCGGTGT  86 95
RTCIAT899_CH12520 2513148 .. 2513165 -  -4.1   -2.5655   GCGACCGATACCAAG             GGCGA TCTGCCAT TCGCC              TAAAGCTCCACCAGG  42 25
RTCIAT899_CH12515 2512255 .. 2512265 -  -2.4  -2.84325   CTCCGGCAAAGATCA                 CGCC CGC GGCT                 TCAACGCAAACCTGT  39 12
RTCIAT899_CH12510 2511082 .. 2511099 -  -8.3  -3.64703   TCGTGCCGAGCGAAA             CCGGCGC CGTG GTGCCGG              CGGGTGATGGCGAAG  64 208
RTCIAT899_CH12485 2504406 .. 2504416 -  -2.4  -3.63782   GAACATTAGCTTAAA                 CGGC GGC GCTG                 CCATATTTCTTTAGA  50 5
RTCIAT899_CH12480 2503340 .. 2503378 - -21.1  -3.74841   AGAAATAACCCGAAA  GGCTTGCCCGCTCGCCGG TATC CCGG-GAGCGGGCAAGCA   GGATCAGACCGGATT 100 29
RTCIAT899_CH12470 2501301 .. 2501315 -  -7.1  -4.37092   ATCCTTGGCACAAAA               GCGAC TATCT GTCGC               GACCGCGCCGCTGTT  74 15
RTCIAT899_CH12465 2499874 .. 2499885 -    -3  -4.47259   ATCAGAACATCAAAA                TATC TGAT GATA                 TTTTAGGCCGCTTCG  64 28
RTCIAT899_CH12460 2498330 .. 2498349 -  -5.6  -2.73875   GCGGTGCGAAGATGA            CTGCCGCT ATCA AGCGACGG             CAGCCTTTTGCGTCC  47 15
RTCIAT899_CH12455 2497591 .. 2497616 - -19.1  -4.47328   AATCGCATGAGAAAA         GCCCCGGATTG AGAT CAATCCGGGGC          TTTCTCTTTGTGCGT 100 83
RTCIAT899_CH12445 2495551 .. 2495587 -   -18  -4.07568   CGCTGCCTGGCAAAA    CACCCTCGGCACGCGG CCAAT CCGCATGCCGAGCGCG    AAACAGAATTTTACT 100 36
RTCIAT899_CH12430 2493846 .. 2493858 -  -4.8  -4.19735   CTGCGGAAAAGCAAA                GGCT TGCAC AGCC                TATAGTCGACAAATG  62 142
RTCIAT899_CH12425 2493599 .. 2493613 -    -7  -3.32627   ATATAAACAGGAATA               CGGGGC ATT GCCACG               ACCACCCGGCCGCCT  58 90
RTCIAT899_CH12420 NONE
        recQ 2489166 .. 2489190 -  -7.7  -2.90226   ATACTAATCAACAAC          GTCGGTGCCCG CGA CAGGCGCCCAC          TGGCCGACTTCGACG  55 525
         kbl NONE
         tdh 2486227 .. 2486241 -  -2.8  -4.60924   TAAATGCGCGAAAAA               GCCT TATCCAC AGGC               TCCGCACGCAGCAAT  67 156
RTCIAT899_CH12395 2483810 .. 2483835 - -14.7  -5.07486   TATCGTCAATAAAAA         GCCCGGCTCGC TTTC ACGAACCGGGC          CTGATTTCATAAGCT 100 52
RTCIAT899_CH12390 2482815 .. 2482834 -  -2.8  -3.36515   CCTTATCGGCAAACA            GATCAGAA GACT TTCCGGTC             GCTGACATATGGTAT  47 163
RTCIAT899_CH12385 2481232 .. 2481244 -  -7.7  -3.09175   AAGTGCGATGGAAGA                CACTG AAT CAGTG                AGATGCAGGCAATTG  57 119
RTCIAT899_CH12380 2480188 .. 2480200 -  -3.3  -2.62184   TGGCGTCGCACACGA                GCGAC AAT GTTGC                GCACCAGCAATCGGG  40 50
RTCIAT899_CH12375 2479324 .. 2479344 -  -8.9   -3.4404   AATAAAATTGCAGAA            GCTTCAGCC GAT GGCCGCAGC            ATAGGCGCCCGGCGA  66 8
RTCIAT899_CH12370 NONE
RTCIAT899_CH12365 2477124 .. 2477147 -  -4.6  -4.25104   GCTGCTGGAGGAAAA          CCAACATC TGCTGCGG GATGTCGG           GTTAATCAATCTTGC  66 68
RTCIAT899_CH12360 2475606 .. 2475616 -  -3.2  -3.55444   TCCGGATCTGGGAAA                 CGAG GCG CTCA                 ATGCCCTGTGGGCGA  49 384
RTCIAT899_CH12350 2475015 .. 2475032 -  -2.7  -2.74192   CATCCCTGAACATGA             CGATAGCG ATG CGC-ATCA             GGTCGGGCGCAGTGG  41 70
RTCIAT899_CH12345 NONE
RTCIAT899_CH12340 2474020 .. 2474042 -  -8.4  -4.70515   TAGAGCTAAAATAAA           GCCGCCTC TCTTTTG GAGACGGC           TTCAAATTCATCACA  90 70
RTCIAT899_CH12335 2473475 .. 2473493 - -13.1  -4.96646   TCAGAGAACGAAAAA             CGGGCGC TCCAT GCGCCCG             TTTTTGCTTGTCAGC 100 36
RTCIAT899_CH12320 NONE
RTCIAT899_CH12315 2470035 .. 2470062 -  -6.2  -3.75738   CATCACCACCAAGAA        GGGCGACAAAAC CCTT GTCCTGCCGCTC         ACTCCGATGATGTTG  60 391
RTCIAT899_CH12290 2467273 .. 2467323 -  -5.3  -4.23647   AAATCATGTAACAAA GCCTTTCCCACGCCGGGAAAATC CCAGC GTTTTTCCCGTGGTGGGAATTGA TCGAAGGTGAGAGAT  69 176
RTCIAT899_CH12285 NONE
RTCIAT899_CH12280 NONE
RTCIAT899_CH12275 NONE
RTCIAT899_CH12270 NONE
RTCIAT899_CH12265 NONE
RTCIAT899_CH12260 NONE
RTCIAT899_CH12255 2462215 .. 2462233 - -12.4  -4.47551   ATGGAATGCAGAAAA             GGCGATCC GCT GGACCGCC             TTCGATACGATGATG  95 204
RTCIAT899_CH12250 NONE
RTCIAT899_CH12245 NONE
RTCIAT899_CH12240 NONE
RTCIAT899_CH12235 NONE
RTCIAT899_CH12230 2456808 .. 2456821 -  -3.7  -3.16564   CCGTGACCTCAGTAA               GGGCG CATG CGACC                GCTGATCGCGTATCG  47 5
RTCIAT899_CH12225 NONE
RTCIAT899_CH12220 2455207 .. 2455230 -  -2.2  -2.57026   GATAGGCATAGGAAC          CCCTACCCGC GACC GCGAGGCGGA           AATTCCAGCGAATGA  38 51
RTCIAT899_CH12215 2454071 .. 2454107 - -15.1  -2.76261   GCTCAATCTCCAAAG    GCTGCATCCGGTCGCCA TGG TGGCGACCGGATGACGT    TTGCTGTTAGTTCGA  83 32
RTCIAT899_CH12205 NONE
RTCIAT899_CH12200 NONE
RTCIAT899_CH12195 2451947 .. 2451961 - -11.4  -5.29782   CACATTGACAAAAAA               GGCGGT CAT ACCGCC               GTTTTTGTCATATAA 100 417
RTCIAT899_CH12185 NONE
RTCIAT899_CH12180 2450082 .. 2450092 -  -3.2  -2.78384   TCCGCCGGGATCACA                 TCAG CAC CCGA                 TACGTCAGATTGATA  41 10
RTCIAT899_CH12175 2448866 .. 2448876 -  -5.4  -3.50853   CTGTTTTAAGCATAA                 TCAG CTC CTGA                 GTAGACGGCCGGCAA  55 15
RTCIAT899_CH12170 2446575 .. 2446595 -  -5.4  -2.52464   GTCTCCGGGAATTTA            GAGCGC TACGTCAAC GCGCTC            TTCAACGTGGAAGGG  46 2
RTCIAT899_CH12165 NONE
RTCIAT899_CH12160 2443581 .. 2443596 -  -2.6  -2.63112   AAATCGTGCATAGGA              TTCCTCA GAA TG-GGAA              AGCGGCGAACCAACC  38 14
RTCIAT899_CH12155 2442907 .. 2442931 - -10.6  -2.67021   GCGGCAAAGAGCAAG          CGGCCCGCCG GAGCG CAGCGGGCTG          AATTAACGAATGTCG  66 74
RTCIAT899_CH12150 NONE
RTCIAT899_CH12145 2440774 .. 2440794 -  -9.6  -4.83615   TAGCCTCGATAAAAA            TGGCCCGC GCGAA GCGGGCCG            GATTGAATGGAATGA 100 67
RTCIAT899_CH12140 2440476 .. 2440496 -    -4  -3.35867   GTAACGGGCAACGAA           GAC-GGCAA CTAT TCGCCAGTC            GTGTTCTTGCCTTCG  49 13
RTCIAT899_CH12135 NONE
RTCIAT899_CH12130 2437350 .. 2437374 -  -4.1   -2.7169   AATGCCGATAAACAT          CTCGAACCGCT AAC AGTGGTGCGGG          TTTTCTATGAAGGAA  43 84
RTCIAT899_CH12125 2436593 .. 2436622 -  -8.7  -2.93382   GCCCATAGTGAGAGA       GGCAAG-CGAGA TCGACCG TCTCGCCTTGCC       GCGTCGTGTAAATCC  62 52
RTCIAT899_CH12120 2434876 .. 2434888 -  -2.6  -4.08144   GTCATCAACGACAAA                GGCG GAAAT CACC                GTCTGTCGATCAGCA  57 412
RTCIAT899_CH12100 NONE
RTCIAT899_CH12095 NONE
RTCIAT899_CH12090 2431955 .. 2431994 - -16.6  -3.56092   CGACGACCTTCCAAA  GACAAAAAGCCGCCAAAC ATGC GCTTGGCGGCTTTTCGTA   TCGGTTAGGCCTAAC 100 36
RTCIAT899_CH12055 2427277 .. 2427288 -  -2.2  -3.38786   GAGAGGGAATATGAA                CCTGC GTT GC-GG                TAACATTTGAATACT  45 74
RTCIAT899_CH12050 2426168 .. 2426180 -  -3.3   -4.2772   TCTAACGAATAGAAA                TTGGC GCT GCCGA                ATCGTTGCCCCGACC  62 281
RTCIAT899_CH12035 2424838 .. 2424852 -  -6.4  -3.05596   CATCTTGGTACGGAA               GCAGAA GCA CTCTGC               CTCCCATCAGGTCGG  52 111
RTCIAT899_CH12030 2424074 .. 2424086 -  -6.2   -3.7941   GATCCTCCAGAACAA                GCCG ATCGA CGGC                ATGACATTCGAGATC  60 233
RTCIAT899_CH12020 2422988 .. 2423023 -  -4.6   -3.9941   GCTCTGACAATTAAA    GCCGGCAGTC-CGATCT TCA AGACCGCGAAAGTCGGC    CCGGCCCGGAGGCGC  60 468
        treS 2421134 .. 2421155 -  -3.7  -3.34517   ATGCCTCCCGAAATA           GATG-CGGAA ACC TTCCGGCTTC           GCTCAAACGGTCCCG  49 128
RTCIAT899_CH12005 NONE
RTCIAT899_CH12000 2420270 .. 2420290 -  -8.1  -3.06915   ACCCAGCGGATCGAA            GCCCGCCGG CTA CCTGCCGGC            AAAGGACGGTGGAGA  56 153
RTCIAT899_CH11990 2418025 .. 2418041 -    -5  -2.56596   TTTTGCAGCAACGGA              GCCCGC TCGGC GCGGGT              GAAGCTTTTGTTCAG  46 135
RTCIAT899_CH11985 2416874 .. 2416894 -  -5.5  -3.17075   GTTCCCTGAATTCAA            TCAGAAG ATTGCCG CTTCTGA            GCACGCCTCCTGAGC  52 1
RTCIAT899_CH11980 2415914 .. 2415928 -  -3.4  -3.55622   CCGAATGTTCCGAAA               CGAAGG CGA CCGCCG               TCTATATTCGGTCAG  49 44
RTCIAT899_CH11975 NONE
RTCIAT899_CH11970 NONE
RTCIAT899_CH11965 2415206 .. 2415228 -    -2   -2.5806   AAACGCGCCGATAAT           GCCAGAAT CGCTTTC ATTTTGGC           CGTCAATGCACAGCA  38 49
RTCIAT899_CH11960 NONE
RTCIAT899_CH11955 2413757 .. 2413775 -  -7.4  -3.63515   TTCTACCGTCAACAA             GTCGGG CAAATGC CCCGAC             AACATTGCCCTCAGC  65 253
RTCIAT899_CH11950 2413299 .. 2413328 -  -2.1  -4.46212   TCGGGCACGAGAAAA       GATCGTCAATCAGC TCG GC-GACTGATGAAC       GTCAGTCATTGCAGC  62 31
RTCIAT899_CH11935 NONE
RTCIAT899_CH11930 2406492 .. 2406506 -    -7  -2.71712   CCCGTGCCGCCAAAG               CTGGCG ACC CGCCGG               ATCTGATGCGCTAAG  52 133
RTCIAT899_CH11925 NONE
RTCIAT899_CH11920 2404388 .. 2404407 -  -6.4  -3.79419   TGGCTGCAGAAAAGA            GGGAAGAA GCCG CTCCTCCC             ATTATTTCCCGCGAC  63 285
RTCIAT899_CH11900 NONE
RTCIAT899_CH11895 NONE
RTCIAT899_CH11890 NONE
RTCIAT899_CH11885 2400592 .. 2400615 -  -3.2   -3.4678   ATCTGCACATCACAA          TGATTGCGG GTTCGGA CCGCA-TCA          GTGCGACGGCTCACA  49 36
RTCIAT899_CH11875 NONE
RTCIAT899_CH11870 2397781 .. 2397796 - -10.4  -3.71848   TCGTGTGATGAAGAA              GCTCGC CCGA GCGAGC               CTAGAAATTGTTGAA  76 26
RTCIAT899_CH11865 2396370 .. 2396419 -  -4.7  -3.66999   ACTCACCGAGGCAAA GCG-GGCCCATCGCGTCGACGGCG CGA CGTCGTCGGTTCGTTAGGTCGCGC GGGGATCCGTTTCGA  55 15
RTCIAT899_CH11860 NONE
RTCIAT899_CH11855 NONE
RTCIAT899_CH11850 2393683 .. 2393713 -   -14  -3.14745   CGTTGAGAAGACAGA       TGCCCTCTCCCCGC AAA ACGGAGAGAGGGTA       ATCAGCGTCAGGCCG  91 33
RTCIAT899_CH11845 2393161 .. 2393173 -  -3.3  -2.66316   GCCGCCATCACACCA                CCAGA ATG CCCGG                GAGTACCGGACGCAG  40 5
RTCIAT899_CH11840 2392792 .. 2392805 -  -3.7   -2.9313   CTTGAAACGAACAAT               CGCCG TCAT CGCCG                CACCTGCAGCTGCCA  44 17
RTCIAT899_CH11835 NONE
RTCIAT899_CH11830 NONE
RTCIAT899_CH11825 NONE
RTCIAT899_CH11820 2391106 .. 2391119 -  -3.1  -2.82933   TCGGAATTGACGAGA               CTGGA GATA TCCAA                GGAAACACCTTATCG  41 109
RTCIAT899_CH11815 NONE
RTCIAT899_CH11810 2390026 .. 2390042 -  -3.6  -4.61852   AAGAGTACAAACAAA              GCCCCG ACATA CGAAGC              TTTTTTCTGGAGAGA  70 372
RTCIAT899_CH11790 NONE
RTCIAT899_CH11785 2386569 .. 2386587 -  -7.5  -2.82516   CGCGGGACCACCATA             TGTCAGT ATCCA ACTGACA             ATGAAGACACCTCCA  55 103
RTCIAT899_CH11765 2383554 .. 2383564 -  -8.2  -2.77999   CAGGTAGTAAGATCA                 GCCG CGG CGGC                 ACGCACTTGGGATGT  53 134
RTCIAT899_CH11750 NONE
RTCIAT899_CH11745 NONE
RTCIAT899_CH11740 NONE
RTCIAT899_CH11735 2378924 .. 2378951 -  -5.4  -4.65895   TGGCGCATGGAAAAA        GGCCGTCGCAAC CAAA GCTGCGCCGACT         TGTCACCGGTCAGAG  73 63
RTCIAT899_CH11730 NONE
RTCIAT899_CH11725 NONE
RTCIAT899_CH11720 NONE
RTCIAT899_CH11715 2371097 .. 2371114 -  -9.8  -2.73124   TGCCATTGGGCAAAG             CCGGCC CATGGC GGCCGG              ATTGAACTCGTTTGC  64 309
RTCIAT899_CH11710 2370331 .. 2370352 -  -2.1    -3.767   GAGGCAGTCACGAAA           GGGGTCTAG GAAG CCAGCACCC            GTAGTATCGCCGGTA  50 69
RTCIAT899_CH11705 NONE
RTCIAT899_CH11700 2369503 .. 2369519 -  -7.3  -3.27525   TTTGCTGAAAGGTAA              TCAAGAC ATA GTCTCGA              CTGCACGGATATCAA  59 100
RTCIAT899_CH11695 2368305 .. 2368326 -  -2.9  -3.42548   ACCAACCAATATCAA           GCTCCAACA TGAA TGGTGTAGC            GAATGTCTGTGATGG  47 219
RTCIAT899_CH11675 2365908 .. 2365941 - -11.7   -2.6472   CAATATCTGAGATCA     GCAGCGGCGCCCGC TCGACTT GCG-GCGCCGCTTC     GCCCCTCTATGCGAG  72 32
        metH 2360517 .. 2360550 - -16.7  -5.32944   CCCAGAATCAAAAAA     GGCGCCACCCCAACC GAAT GGCTGAGGTGGCGCG      TGTATATGGAATCAA 100 82
RTCIAT899_CH11650 2356984 .. 2357012 - -14.5  -4.63107   ATCAAACAATGAAAA        GGGCGAGGAGCCC GCA AGGTCCCTCGCCC        GCATGATGCAGCTGT 100 41
RTCIAT899_CH11645 NONE
RTCIAT899_CH11640 NONE
RTCIAT899_CH11635 NONE
RTCIAT899_CH11630 2352633 .. 2352643 -  -4.6  -3.57144   GTGCTGACGGTGAAA                 CGCG CGA CGCA                 TATACGGCGGAATTG  54 327
RTCIAT899_CH11620 NONE
RTCIAT899_CH11615 2351190 .. 2351203 -  -2.3  -2.53995   AGTCACGTGAATTCA               TCCGG ACGA CTGGA                GTATTTATCTGGTAC  38 62
RTCIAT899_CH11610 2350441 .. 2350451 -  -2.4  -3.59979   GGTCTCCATGTCAAA                 CGCG CTT CTCG                 ATACGGAACAACAGC  47 10
RTCIAT899_CH11605 2349519 .. 2349533 -   -10  -3.05596   GACCTTTCCATCGAA               GTCGAC GAT GTCGAC               ACGCTCTATCAGCGT  64 198
RTCIAT899_CH11565 2342426 .. 2342440 -  -2.8  -3.30124   CGGGATTGCGGAGAA               CCATGT GTC ACATTG               ACCGCTGGCATTTCG  45 94
RTCIAT899_CH11560 2340765 .. 2340784 - -11.4   -4.2828   CGCTACCGATGAAAA            GGGCCGCA GGGC TGCGACCC             CATTGCTTGCAAAGA  91 52
RTCIAT899_CH11555 2339232 .. 2339287 -  -2.6  -2.94045   GCAGGTCAACAAGCA TCCCG-GC-GCCCCCTGCCCGATCCT AGAATG AAAATCGGGCAAGAGGCAGATCGCAA ATGCCTTACGCCCTT  40 31
RTCIAT899_CH11550 NONE
RTCIAT899_CH11545 2336517 .. 2336538 - -11.5  -4.84761   ACATGCCTACAAAAA           GCCGCCAAG TTTC CCCGGCGGC            TTTTTCTTTGTCTTG 100 95
RTCIAT899_CH11535 NONE
RTCIAT899_CH11530 2333510 .. 2333535 -  -7.6  -3.70902   TCTTCGACAGGTAAA         CAGGGCATAGC TCACT GCC-TGCCCTG         CAATCAAAAGGCCGG  65 55
RTCIAT899_CH11525 2333083 .. 2333108 - -18.3  -4.52857   ATCGCCCAGACAAAA         GGCCGGTGAGC GCGA GCCCACCGGCC          TTGAAAAAATCACGG 100 51
RTCIAT899_CH11500 2327331 .. 2327342 -  -7.2  -2.76492   CTATGTAGGCGAAAC                CCCG CCCT CGGG                 CAACGGCGAAACCTT  55 80
RTCIAT899_CH11495 2325576 .. 2325602 - -16.7  -4.53303   GATTGCTACATAAAA         GAAAACCCCGG ACAAG CCGGGGTTTTC         AAAGAGCCAAACCGA 100 45
RTCIAT899_CH11490 NONE
        metF 2323449 .. 2323472 - -14.6   -4.5442   TGCTTAATTAGAAAA          GCGCATGCCC GGCC GGACATGCGC           TTTTTATCGTCACGC 100 54
RTCIAT899_CH11450 2315791 .. 2315809 -  -8.8  -4.25104   TCCGGCTGAGCAAAA             GAGCTACG TTT CGAAGCTC             ATCCAGAAATACGCC  79 403
RTCIAT899_CH11430 NONE
RTCIAT899_CH11425 2311166 .. 2311184 -  -6.6     -3.24   AAACGAATTCACGAA             TAGCCGGG CAA CGCGGCCA             GTAGGCGATGAAGCG  56 0
RTCIAT899_CH11420 2310292 .. 2310303 -  -3.6  -3.11634   TTCGATAGCATGGAA                GACG ATTC CGCC                 CTACCCCGCAATTCC  45 56
RTCIAT899_CH11415 2309004 .. 2309016 -  -2.6  -3.16191   GCACAGGCTCATTAA                CCGA GACCG CCGG                CAATTGCCACCGAAA  43 66
RTCIAT899_CH11405 NONE
        mraW NONE
RTCIAT899_CH11395 NONE
RTCIAT899_CH11390 NONE
RTCIAT899_CH11385 NONE
RTCIAT899_CH11380 2301420 .. 2301440 -  -2.5  -3.53563   AGAGCCCTTTCTAAA            GCCCC TGATGGGTGTG GGGGC            CCGTGTCGGAAAATG  47 0
        mraY NONE
        murD NONE
        ftsW 2297580 .. 2297605 - -10.4  -2.62175   CCCTAATATAGGAAG         CCGCACCGAC CGCGTC ATCGGCGCGG          GCCAAGCCCCCCTCA  66 126
        murG NONE
        murC NONE
        murB 2293955 .. 2293974 -   -15  -4.32804   ATAACCAATTGAAAA            GGCCGGGT GAAA ACCCGGCC             TTTTTCTTGAATCAT 100 72
        aqpX 2291599 .. 2291632 - -19.7   -3.9122   GATTTTTTTAAACAA     TAAGCCCCGCATCGA GGGA CCGATGCGGGGCTCA      AGGCTTTTAAATGAG 100 48
        ddlB NONE
        ftsQ NONE
        ftsA NONE
        ftsZ 2286265 .. 2286302 - -17.9  -4.40572   ACAATGGTTATAAAA   TAAGAAAATCCGGAGCC TTTC GGCCCCGGATTTCCTCA    ATATGGTTAGCAACC 100 65
        lpxC 2285006 .. 2285026 - -10.4  -4.34482   GCCGCCAAAAAAAGA            GCCGCCCT TCATC AGAGCGGC            AGCTTTTCTCATTCC  90 54
RTCIAT899_CH11310 NONE
        recN 2282215 .. 2282226 -  -7.2  -2.62735   ACAGTCGTGAGATCA                GCCG TTGC CGGC                 CAGCAAGCGTTTGGC  54 11
RTCIAT899_CH11300 2281380 .. 2281397 -  -4.7  -4.10781   AACAAGGCACACAAA             TCCCGCG GGTC CGCGGAG              GATATGATCGATCCT  61 77
        ligA 2278058 .. 2278075 -  -2.7  -4.73388   AAGCTCTACCAAAAA             TTCGG ATTCGAGA CCGAA              GGCCGGCTGCGTGCC  72 143
RTCIAT899_CH11280 NONE
RTCIAT899_CH11275 2276372 .. 2276383 -  -5.8  -3.36273   TCGTTGCAAGATGAA                GGAG GCAT CTCC                 GAATGGGCGCACTTC  56 119
RTCIAT899_CH11270 2275554 .. 2275589 - -14.8  -4.37092   AGTCGGCTCACAAAA    GCAGATCGCCCTGGAGC CGA ACTCCAGGGCGATC-GT    TTTTGTATAACCGGT 100 233
RTCIAT899_CH11260 2274929 .. 2274941 -  -6.9  -3.32844   CTCTTTATCCCAGAA                GGGCA TGA CGCCC                GCCGGAAGCAAGGCT  58 2
RTCIAT899_CH11255 NONE
RTCIAT899_CH11250 NONE
        prmA 2271726 .. 2271754 -    -8  -3.71917   AGTCGAAACTGCAAA        GGCAATCGGCGC CAACC GCGGCGGTCGCC        GCTAACAAGTTTACG  68 230
RTCIAT899_CH11235 2269287 .. 2269303 -  -2.1  -2.55351   GGCTGGGATATCAAG              GTGGCGA TGC TCGCAGC              TCTTCTCGTCGGCCT  38 162
RTCIAT899_CH11220 2267788 .. 2267804 -  -3.5  -3.62591   CCCATAATCTCGAAA              GCGGCGG AAG CCTACGC              CGAGGAAGTGAAGGC  51 94
RTCIAT899_CH11200 2264159 .. 2264181 -  -2.7  -3.34716   TCATTCCTGAAAAAC          CTGCTCGC AACATTAG GCGAGC-G           ATACCCCTTATTTCC  47 33
RTCIAT899_CH11195 2262154 .. 2262164 -  -3.2  -3.35072   AACAATGAAACCCAA                 CAAG AAC CTCG                 ATTTTGCCATCCGCG  47 496
RTCIAT899_CH11170 2257556 .. 2257588 - -17.9   -3.6215   CGAAGCGACGGGAAA      GCTATCGCGAGAC ACTTCCA GTCTCGCGATAGC      ATCACTCGGTATCGC 100 100
RTCIAT899_CH11160 2256311 .. 2256322 -  -5.8   -4.0641   TTTCAGCCATACAAA                GGGA AAAA TCCC                 TGAAACGTTGGTATC  65 89
RTCIAT899_CH11145 2251683 .. 2251694 -  -3.6  -5.09225   AGCCGAGCGAAAAAA                CGGC TAAA GCCA                 CCGACACGACGAGGA  77 78
RTCIAT899_CH11140 2250723 .. 2250746 -   -16  -4.06502   GACGCGCAAAGCAAA          CGGCCGGATC GTGA GACCCGGCCG           TCTTTGTTGAAAAGG 100 42
RTCIAT899_CH11130 2249146 .. 2249172 -  -2.8  -3.72576   TTCTCTGCGATGAAA         TCACCTCCGCGC TGG ACCCGGAGCTGG         TGGCGGAAGTTCTTG  52 248
RTCIAT899_CH11105 2244684 .. 2244694 -  -4.6  -2.83743   AAAAACCGGAAGAAC                 GCCG ATG CAGC                 CTAGCGCCATTCGCA  45 78
RTCIAT899_CH11100 2240731 .. 2240751 -  -9.7  -2.89668   GAATAGTCGCAGAGA            GCTCAAGAC GAT GTCGTGAGC            GCGCTTCACCTACCA  65 69
        thyA 2238049 .. 2238066 -  -6.9  -3.63805   AGCCGACAGCCTAAA             CCGCGAC TTCG GCCGCGA              TCGCCGCATGCGGCT  62 3
RTCIAT899_CH11070 NONE
RTCIAT899_CH11065 2235773 .. 2235785 -  -3.3  -3.24925   ACTTTACATCATCAA                TGCGG CGG CGGCA                GATGGAACGCACCTA  45 54
        folA NONE
        hflK NONE
RTCIAT899_CH11050 2232922 .. 2232941 -  -9.2  -4.99043   CCGTCACAAAGAAAA            GGGCCACC CTGA GGCAGCCC             TTTCATTTCTAGCAC 100 48
RTCIAT899_CH11045 2230681 .. 2230697 -  -2.2  -3.91911   TCGAGCTGAAGGAAA              GCCG TGAGGCGAT CGGC              TATTGCGGGCTGATG  54 386
        miaA 2228216 .. 2228233 -  -9.1  -4.08216   GCAGCGTCGCGAAAA             CCAGCGA AGAC TCGCCGG              ATACGGTCGATCTGC  76 446
        ilvB NONE
        ilvN 2223773 .. 2223793 -  -6.8  -3.86346   CTACCCCCGTATAAA            TCAAGCCG TCGAT CGGCCCGA            GCGTCGCAAAGGCTA  65 77
RTCIAT899_CH11010 2222590 .. 2222617 -  -3.4  -3.57971   ATATCGATCCCGAAA        TC-CTCCAACGCG CAG CGTGTCGAAGAGA        ACCGTGACTCGATCG  51 129
RTCIAT899_CH11000 NONE
        nthA NONE
        nthB 2219739 .. 2219759 -    -4  -2.72511   GCGATTGCGCCAAAG           GCG-ATGCG ATCT CACATGCGC            TCAAGATAGCTCTCC  43 16
RTCIAT899_CH10985 2218895 .. 2218906 -  -5.8  -3.86897   CCGAGCCTGCAGAAA                CTGG GTTT CCAG                 CTCGTCGGCGGCCGG  62 511
RTCIAT899_CH10965 2216098 .. 2216120 -  -5.4  -3.96624   GATGGGCACGACAAA           GCGACATCAC CAC GTGGCGACGC           ATCGGCAGCAACGTC  63 74
        pdxJ 2214795 .. 2214827 - -10.4  -3.27774   CAGGTCAATGACGAA      CAGTTCGCCGCCGG TCTCG CCGGCGCCGGCCTG      CCGCCCTTCGTGGTC  68 427
RTCIAT899_CH10950 NONE
RTCIAT899_CH10945 2211846 .. 2211856 -  -2.4  -3.58726   CGGTCTGACACAGAA                 TGGC ATC GCCC                 TCTTCGCACTTGCCG  49 454
RTCIAT899_CH10915 NONE
RTCIAT899_CH10910 2205975 .. 2205995 - -18.3  -4.36931   CAACTCATACGAAAA            GGGCAGCCG CTA CGGCTGCCC            TTTTTCATTCCTCGC 100 30
RTCIAT899_CH10900 2203312 .. 2203332 -  -3.1  -3.93638   AATCAATCTTATAAA            GCGGCGCCA GCC TGGCACGTC            GGACGCATGGAAAGC  56 485
RTCIAT899_CH10890 NONE
        ilvC 2201343 .. 2201364 - -15.1  -4.40003   GCCCATAAATAGAAA           GGCCGGAGC TTTC GCCCCGGCC            CTCAAATCCGACTTT 100 51
RTCIAT899_CH10865 2198650 .. 2198679 -  -7.7  -5.65513   GACGAAGTAAAAAAA       CGGCAGTGGCGGC TTAG GCCGCCATTGCTC        CGATCTCGCCTGCAA 100 9
RTCIAT899_CH10855 NONE
RTCIAT899_CH10850 NONE
RTCIAT899_CH10845 2193709 .. 2193724 -  -3.9  -2.83403   CCCGGCCGATCAAAG              CCGCC AGGCCG AGCGG               ATGGCAACGGGATAA  43 4
RTCIAT899_CH10840 NONE
RTCIAT899_CH10835 NONE
RTCIAT899_CH10830 NONE
RTCIAT899_CH10825 2189483 .. 2189493 -  -2.4  -3.74747   CCAATCTGCAGGAAA                 CCGC GCA GCCG                 AAAACCCTCGAGACG  52 273
RTCIAT899_CH10800 2188044 .. 2188077 -  -7.3  -3.21772   AATTTGTTGACAATA     CGATTGCAGCGCGCG CTCA CCCTCGCCGCAACCA      GCAGCAGTCAATAGA  59 205
RTCIAT899_CH10795 2186291 .. 2186301 -    -4  -2.75844   CGCTTTACTGCAAAG                 TCAA TTG TTGA                 AAACCCGGCATGGCT  43 201
RTCIAT899_CH10790 2185449 .. 2185472 -  -8.2  -3.58533   CGAGAATCGGCGAAA          TTGCCG-TCCG CAT CGAAGCGGCAA          CGGCAACGATGGAAC  64 354
RTCIAT899_CH10780 2184214 .. 2184227 -  -5.2  -3.83502   TAGTCGTATATGAAA               GCGC GAAAAT GCGC                CTCTAGCAAGCGCTT  61 28
RTCIAT899_CH10775 2182394 .. 2182417 -  -5.8  -3.25015   GGCAATCAGGATGAA          GGTGGCGCCA TGAT CGGCGCCCGC           AGCAAGCCGATATTG  54 111
RTCIAT899_CH10770 2179317 .. 2179327 -    -4  -3.02511   TGTATTGTTTTAAGA                 CAAA GCT TTTG                 CGTATTTGTTAAGTC  45 191
RTCIAT899_CH10765 NONE
RTCIAT899_CH10760 2176655 .. 2176673 -  -3.7  -3.72576   TGTTCCGCCAGGAAA             TGGGCCG CTCGC CAGCCCG             TTACTATCTTGAAAT  54 274
RTCIAT899_CH10740 2174015 .. 2174036 - -11.5  -2.92714   GCGAATAAAAATCGA           CTGGCCGCG TTCA CGCGGCCAT            TTTGCGCCCGATCTC  71 14
RTCIAT899_CH10700 2167431 .. 2167441 -  -6.8  -3.52539   GAAGCGCAAGCACAA                 CAGC CTG GCTG                 CCGGCGCCTGAGCCT  60 100
RTCIAT899_CH10690 2164796 .. 2164817 - -12.9  -2.82516   TGTTCGAGTATGACA           GGGCCGCGG CTCA CCGTGGCCC            CTTATATTCATAGTG  76 119
RTCIAT899_CH10685 2164080 .. 2164093 -  -6.7  -3.30771   GCACAGGCTTCAGAA               CGCAT CGCA ATGCG                GCGAAACAAGGAATA  56 49
RTCIAT899_CH10680 2163296 .. 2163307 -  -3.6  -4.05788   TGCCTGCAAATGAAA                GCCG CACT CAGC                 CCGGTAGCATCTCCG  58 21
RTCIAT899_CH10675 2161978 .. 2161998 -  -3.1  -3.35597   CGTATTCCCGAAATA            CCATTGTGG TTT CCCCATCGG            GGGACGGCATCAGGG  47 264
RTCIAT899_CH10670 NONE
         glf 2159934 .. 2159956 - -17.8  -2.87931   GGCACTGCCGACAGA           TACGCGCCGA ATA TCGGCGCGTA           ACGGGCGATCGCCTA  95 38
        cobQ 2152688 .. 2152708 - -11.1  -2.78816   CCATGTTCGAGCAGA            CGAAGAGCG AAG CGCTCGTCG            TGGTCAACGACCTGA  65 138
        cobP NONE
        cobW 2148735 .. 2148747 -  -3.3  -3.04026   ACATCAATCAAACCA                GCGCT TCG ATCGC                CCTACGCACGATCGT  43 5
        cobN NONE
RTCIAT899_CH10605 NONE
        cobO 2142812 .. 2142825 -  -2.3  -2.94747   CTACGTCAGCAGATA               TCGGC GACA GGCGA                TCCAATCCTCATAAA  40 305
RTCIAT899_CH10580 NONE
RTCIAT899_CH10575 2139135 .. 2139155 -  -9.7  -2.62653   TGAGAACGGGATAAG            GCGATCTCG ATT CGACATCGC            TCCCACTGCAAACAT  63 236
        cobA 2138226 .. 2138241 -  -4.6   -3.4252   GTGCAGCGATCAGAA              GTCCGC TCAT GCCGAC               ACCTTGCGTCCGCTC  51 16
        cobB NONE
RTCIAT899_CH10560 NONE
        cobD NONE
RTCIAT899_CH10550 2134245 .. 2134272 -  -5.6  -4.15854   AAATCCATTCCAAAA        GCCAATGGTTTCC ACC AGAAACC-CCGGC        AATTTGGCAAGCCAC  65 162
       acpXL 2133851 .. 2133885 - -11.3  -4.91084   TATTTAAGAATAAAA     CCGCCCGGCCGCC ATATTCGTG GGCGGCTGGGCGT     CAAAAAAATACAAGG 100 48
RTCIAT899_CH10540 2133301 .. 2133325 -  -3.4  -3.61398   TGCGGCGCCGAACAA          GCCGGCAGCA TCAAC CGTTGGCGGC          GATGGCGTCGAGAAG  49 11
RTCIAT899_CH10535 NONE
RTCIAT899_CH10530 NONE
RTCIAT899_CH10525 2129659 .. 2129691 -    -4  -2.73364   TTCTGAGCGCAAGGA      CGATCCGGGTGACG AAAAG CTTCACGCGGCTCA      GTCCATCTTCAGGAT  43 23
       lpxXL 2128638 .. 2128656 -    -6  -3.44051   TCGGGATGAGCAGAA             GTTCTCGT CAA AGGAGAAC             TTTATGAAAAACAAG  56 120
RTCIAT899_CH10515 2127685 .. 2127709 -   -10  -4.46926   CAGGTCAGCATAAAA          TCAGGCGAAG AGGAG CATCGCCTGA          GCACGGACGTCATTG  88 73
RTCIAT899_CH10500 2124331 .. 2124344 -  -2.3  -3.14284   CGCGCAGGAAGAAAT               CGTCA AACA TGGCG                TTCTCCCTTGCTGTG  42 14
RTCIAT899_CH10495 NONE
RTCIAT899_CH10490 2122981 .. 2123016 -  -2.4  -3.14931   CGCACGCTGGATGAA    GCCGCGATCGAAG-GCC TGC GCCGCTCCGCCCGCAAC    TATGTTGCCAACTGG  43 127
RTCIAT899_CH10475 2120393 .. 2120429 -  -5.7  -3.07043   CGGAGCATCCTAACA    TTCCGTCATCCTCGGGC TTG ACCCGAGGATCCAGGCA    CGAGCCTCACTGCCT  52 268
RTCIAT899_CH10450 2113345 .. 2113367 - -11.2  -3.77832   GCGGAAAGTGAAGAA           GGGCCGGTAA GGA TCGCCGGCCC           TCGAGATGGAATGAC  82 51
RTCIAT899_CH10415 2107400 .. 2107414 -  -3.5  -3.95042   AAAAGGCCAATCAAA              GGCTGC AATA GC-GCC               GGCCGCCTTGACGGT  58 6
RTCIAT899_CH10410 2106822 .. 2106845 -  -2.3  -3.16564   TCCTTAGGTGAGCAA          CGTTTGTCG CAACTC CGCCTAACG           CCTCTTGGCGACACC  43 214
RTCIAT899_CH10405 NONE
RTCIAT899_CH10400 2104929 .. 2104955 -  -2.9  -4.07568   GTTGCGGCTGCAAAA        GCC-GCAGGCCT TCTT AGTCCCGCCAGC         CCGGCATCGCCATCA  58 38
RTCIAT899_CH10395 NONE
RTCIAT899_CH10390 2102986 .. 2103018 -  -7.8  -2.51464   GCACCACGCAGGAAG     GCACTGG-CGTGA AAAGGCAA TCACGTCCAGCGC      TCGCATGGGGCGCTC  53 39
       cobT1 2099093 .. 2099132 - -20.9  -3.85092   ACCATCTACAGGAAA  CTGAGCGGCGAAACGTT TATTTC AACGTTTCGCCGCTCGG   TTTTTCAGTGCTTGT 100 30
RTCIAT899_CH10360 2098186 .. 2098206 - -12.5   -2.8085   CGAATGCAGTGAAAT            TCACGCCGC AAG GCGGCGAGA            TCAGTGTCAAGGTTG  69 379
        exoI NONE
RTCIAT899_CH10345 2095676 .. 2095686 -    -4  -4.90778   TTTAGCGAAAGAAAA                 GAAA CTT TTTC                 TCAAGGAAGCAGGCT  75 26
RTCIAT899_CH10340 2095084 .. 2095100 -  -7.3  -4.08064   AAGGCTGCCGGAAAA              TCAACAG CTT CTGCTGA              GCGCCTCATCAGAGC  74 56
RTCIAT899_CH10330 2092906 .. 2092937 - -13.6  -3.28924   TATTTTTCCTGATAA      CGGCCCCGCCCGTA GTGT TTCGGGCGGGGGCA       ATATCCGCGGATCTT  87 48
        ssuD 2091550 .. 2091568 -  -5.2  -2.78216   CACGCGGACGAAGGA             CGTGTCGA ATG CCGACATG             GGGATCTCCCTTTGA  47 48
RTCIAT899_CH10320 NONE
RTCIAT899_CH10315 2089883 .. 2089922 -    -5  -3.62448   CGTAAAAACAGAAGA  TAGAGCGTTTTCGCAATT CGAA AAAAGCGGAAAAGCTCTA   ATTCCGTGCGTCGCC  58 23
RTCIAT899_CH10270 2081326 .. 2081347 - -15.1  -4.24075   ACCGACGAATAGAAA           GGCCGCCGG TTTC CCAGCGGCC            CCTGCTATCAAGCTG 100 52
RTCIAT899_CH10250 2076246 .. 2076296 -   -22   -3.2614   CAGTGGCGATAGCAA GCTTCAATCGAAAAGCGCCGGACC ATT GGCCCGGCGCTTTTCGATTCATGA TGGTCTTTCTATCGA 100 48
RTCIAT899_CH10235 NONE
        ltrA 2072188 .. 2072201 -  -3.8  -3.94974   ATGAACAAAAATCAA               TCCC TTCCCT GGGA                CCATCCGCGTTTTCG  56 476
RTCIAT899_CH10220 NONE
RTCIAT899_CH10215 2070459 .. 2070491 -  -2.6  -3.40788   AGCGAAGCCAACCAA     CCTCCGGCGCTGC TTTCCCGG GCAT-GCCGGCGG      CTTGCTCACCAGAGT  45 31
RTCIAT899_CH10195 2063473 .. 2063504 - -17.4  -3.14468   CCGTACGACAGGCAA      CAAAAAGGGCGACC AATG GGCCGCCCTTTTCG       TTTTTCTCCGCTGAA 100 47
        rpiA NONE
RTCIAT899_CH10175 2059841 .. 2059859 - -11.7  -5.38839   GACATAAAAAGAAAA             GCCCGGA AACGA TCCGGGC             TTCGAATTTCAACTG 100 105
         gor 2058364 .. 2058384 -  -6.7  -4.08394   ATATTTGCGTGAAAA            CGGGGGCGT TAC ACGCGCTCG            CCATTGCGGATGCGG  70 13
RTCIAT899_CH10165 2056790 .. 2056821 - -13.7  -4.56597   CGCTCCGGCCAAAAA      GCAAACGGGCCGG TTTTCG CCGGCCCGTTCGA       TAGGTCATGGACGCG 100 48
RTCIAT899_CH10160 2055792 .. 2055811 -  -4.2   -4.2349   CGGCGATATCGAAAA            GCGCGTTC TTAA AAAGGCGC             ACGAGCGAAAAGTCA  65 475
RTCIAT899_CH10145 NONE
RTCIAT899_CH10140 2052729 .. 2052756 -  -3.2  -3.28924   GATGCGCCCTGAGAA        CGCATCCAGATC TATC GCGCCGGTTGCG         GTCTGTCCAGAGCTC  45 39
RTCIAT899_CH10135 2050639 .. 2050663 -  -7.7  -4.19177   AGCCTGGAACAGAAA          CAGGCACCGCC GAC GCCGGCGCCCA          AGATAACACAGGCGC  75 222
RTCIAT899_CH10120 2046452 .. 2046465 -  -2.3  -3.26874   ACAAACTATTAGCAA               GCTTG TGAA CAGGC                GCAGAATTATGCCGC  43 32
RTCIAT899_CH10115 2044976 .. 2044994 -  -6.6  -2.50074   TCTGGCACAACATAC             GCCGACTC GGT GAGCCCGC             TTGGTCAATGCTTAA  51 130
RTCIAT899_CH10110 NONE
RTCIAT899_CH10105 NONE
RTCIAT899_CH10100 2041536 .. 2041549 -  -3.7  -3.14132   GTCGCTCTTCATCAA               TGCCG CGCG CGGCC                GTCGTAAGTCTTGAC  45 8
RTCIAT899_CH10095 2040807 .. 2040826 -  -5.6  -3.28119   ATGGAGGCAGAGCAA            TTCGCAGC CGAT GCCGCGCA             TGTCATGCGGGATCT  52 78
         gnd 2038709 .. 2038734 - -15.5  -4.48987   GGCTGATAAGGAAAA         GGCCTGCACGGT TTC ACCG-GCAGGCC         TTTTGATCATCGTAT 100 53
RTCIAT899_CH10075 2035918 .. 2035975 - -10.5  -2.66435   AGCCGGATCACAGGA CGTGTCCCGGCCGTGATACCGACC-CGC AAC GCGAGGCCGGTATCACTACAGCGAGAAG ATAGAGATCAATCAG  66 33
RTCIAT899_CH10070 NONE
RTCIAT899_CH10065 NONE
RTCIAT899_CH10060 2032797 .. 2032817 - -18.3   -3.9122   GACCGCTGCAAAGAA            GGAGGCGGC CGG GCCGCCTCC            GGTCATGGGATCATA 100 36
RTCIAT899_CH10055 2030253 .. 2030270 - -14.1  -3.53012   CTTGGGGCCCCGAAA             GCGCCGC CACT GCGGCGC              AATAGTTCAATCCAC  95 59
RTCIAT899_CH10050 2029433 .. 2029443 -  -3.2  -2.74461   TAGCCATGTGGAAAT                 GCCT CAA AAGC                 TCTTGAAGGATGCGA  41 18
RTCIAT899_CH10045 2028246 .. 2028271 - -14.7   -4.8048   CTTCGAGATGAAAAA         GCGCGCGGG ATTGGTCA CCCGCGCGC          AAACTAGCTCTTCCC 100 45
RTCIAT899_CH10040 2027150 .. 2027182 - -18.5  -4.03234   GTGTGGTCATACAAA      TGAGACGCCCGGAAC CAG GTCCCGGGCGTCTTA      TGATGATCAGTCGCG 100 32
RTCIAT899_CH10035 2025445 .. 2025472 -  -5.4  -3.42583   GTAATAGAGTGAGAA        CAGCGGCAGGCT TTAC AGCGCGCTGCCG         GAAGTCATCACCCCT  53 40
RTCIAT899_CH10030 2024972 .. 2024990 - -13.1  -4.25104   TTTTGGGCACGAAAA             GGGCGGC TCTCG GCCGCCC             TTGATTTGCTTGGTG 100 56
RTCIAT899_CH10020 2017253 .. 2017293 - -19.2  -3.10796   CTGGAGCAGTCAACA TTTGCGCCGCCGAAACGGA TTAT CCCGTCT-GGCGGCGCAAA  AATGCATGAGATTTG 100 58
RTCIAT899_CH10015 2016444 .. 2016462 -  -2.3  -4.62069   CTCTCAGCGCAAAAA             GCGATCG AGTGA CGACGGC             TGTGGGAAATAGGTC  65 420
        folP 2014792 .. 2014805 -  -3.7  -3.01712   TCTCCGTTTCGAACA               GGCGC GATC GCGTC                CGAAAGCCGCTCCCT  45 52
        folB 2014372 .. 2014390 -  -7.3  -3.53563   AGATTGCCGCCCAAA             CCGAGCG TCGTC CGCACGG             CTGCACCCTCAGGCA  62 34
        folK 2013827 .. 2013873 - -24.8  -3.52919   AGCATTGAACGAGAA TTCATAAAGACAAAGGCCGGCA ATT TGCCGGCCTTTGTCTTTATATA TCATGGGGCCTAGTT 100 40
RTCIAT899_CH09975 2008846 .. 2008886 - -13.2  -3.35679   TCCCTTGAGCGACAA  CGGCTACGCCGCCGCCGA GATTG TCGCCGACGAGGCAGCCG  ATAAAGGCTACAAGC  81 486
        dksA 2007975 .. 2008000 - -15.5   -4.7629   GCAGGAATCGAAAAA         GGCACGACGGA GATT TCCATCGTGCC          TTTGTTTTATTTAAG 100 63
RTCIAT899_CH09955 2003824 .. 2003871 -  -9.9  -4.74103   TCGGGAAGGGAAAAA CGGAAATGGACCATGCCCGCCG GATTA CGGCGG-CAGGGTCGATTTCAA GACATGACGACTGCC  95 159
       trpS2 2002722 .. 2002747 - -13.2   -3.2794   CCCTAGTCACAGGAA         CGGCCGGGTG TGCGAT CGCCCGGCCG          TTCTCTTTCTTTCAA  87 37
        recA 1999376 .. 1999407 - -11.6  -4.71426   GCCGCACGAACAAAA      CCGGCCGCA-CATCC CTT GGACAATACGGCCGG      TTTCGACTTTTGGGT 100 76
        alaS 1996570 .. 1996593 -   -11  -4.40003   CTGCACAAAGACAAA          TGGCGGACAC CGAA GCATCCGCCA           TCTTTAATTATCAAT  93 55
RTCIAT899_CH09925 1995137 .. 1995168 - -10.8  -2.77899   GCCGGCCATCAAGCA      TGGCGATACCGTCG TCAC CGAAGGTGCCGCCA       TCTGCGCCTATCTGG  61 491
RTCIAT899_CH09910 NONE
        lasT NONE
        murI NONE
RTCIAT899_CH09895 NONE
RTCIAT899_CH09890 1989322 .. 1989335 -  -3.8  -2.72144   CCATCTTTCTGAAAG               GACG CGCCCT CGTC                TAGCAAAGATTTCCA  43 87
RTCIAT899_CH09885 1987388 .. 1987405 -  -9.1  -2.75844   CGCCCTATTGCAAAG             GCGCGTGC ATC GC-CGCGC             TCCATCAAGGCGCTG  60 369
RTCIAT899_CH09880 1986431 .. 1986452 - -10.1  -4.07647   ACATGTCAAATGAAA           CACCGGACA TTTC TGCCCGGCG            TTGGCGCGGTCTGTA  83 90
        rpsD 1985626 .. 1985644 -   -16  -5.56264   TCCAAAGACAAAAAA             GCCGCTCG AAC CGAGCGGC             TTTTCATTCATCAAG 100 56
RTCIAT899_CH09870 1984669 .. 1984690 -  -2.3  -3.20322   CGGGACGAGAAGACA           CCGTA-TCAA TCA CCGAATACGG           ACCAGCCGGTGCGGG  43 9
RTCIAT899_CH09865 1983673 .. 1983690 -  -2.6  -3.53012   GCCTCTGTTTTGAAA             GGGCTT CCTCTT ATGCCC              GATTCGATGACATCG  47 61
RTCIAT899_CH09860 NONE
RTCIAT899_CH09855 1981924 .. 1981941 -  -5.5  -3.72576   GCCTGTTGGAGCAAA             GATAGCC CTCC GGCTGTC              ACTTTCCAAGAGGCC  58 68
RTCIAT899_CH09850 1980944 .. 1980956 - -10.5  -2.73124   CGCGACTCCTTAAAC                GCCGC TGC GCGGC                CGGCTGACCCAGCGT  66 7
RTCIAT899_CH09830 1977060 .. 1977071 -  -2.2    -3.273   TGATAAAACTGAAGA                TGGC CATG ACCA                 CGAACTGCCGGCTTT  43 179
RTCIAT899_CH09825 1975632 .. 1975646 -  -8.5   -2.5632   GAAGACATGATCAAG               GCCGG CATTC CCGGC               GCCAAGGTGACGATT  52 191
RTCIAT899_CH09800 1970632 .. 1970646 -  -2.8  -3.39732   CAAGGATGTGAAATA               GCCT GAATAGG AGGC               GCGTTAGCTTGATAT  47 55
RTCIAT899_CH09795 1969356 .. 1969373 -  -3.3  -3.19246   GCAAGCGGAAGGCAA             TCCCGCA CAGC TGCAGGC              CTTCGGTCCGATGAT  45 179
RTCIAT899_CH09765 1965296 .. 1965328 -    -9  -3.22884   GGATCAACGTAGGAA      GCCGCGCCGCGGTT CCAAC AATGGCGGCGCGTC      GCCCGTGTGGGGTTG  65 51
RTCIAT899_CH09760 1964297 .. 1964319 -  -6.8  -4.18018   GGTCCTGACGGAAAA           CCTGACGGGC CTC GCCCGCATGG           TCCGCTCCTATTCGA  71 449
RTCIAT899_CH09735 1960293 .. 1960306 -  -3.1   -3.4072   GATCCGCCATGATAA               CTCCCT TGC AGGG-G               TTATAGCGTGTGATA  47 26
RTCIAT899_CH09730 NONE
RTCIAT899_CH09725 NONE
RTCIAT899_CH09720 NONE
RTCIAT899_CH09715 1957066 .. 1957078 -  -4.7  -2.76171   ACTCACCGAAGATCA                TGGCG CAA CGCCC                TTTGGCGACGAGACA  45 10
RTCIAT899_CH09710 NONE
RTCIAT899_CH09705 1955073 .. 1955088 -  -6.8  -2.78712   TCGCCAAGGCAACCA              TCGCCC ATTT GAGCGA               AGAAGACTTTCGCTG  52 45
RTCIAT899_CH09670 1946568 .. 1946592 -  -2.1   -3.6682   CCTCAGTTACCGAAA         GACGGA-GGC CTTAGC ACCATCCGCC          TCAATATTCAAAATT  50 33
RTCIAT899_CH09655 1941903 .. 1941927 -  -8.6  -2.61264   GCGCCGATTGACAAC         CCG-GCGGTCA GTGC TAACCGCTCGG          CCTGATTTCAACAAG  56 113
RTCIAT899_CH09650 1941014 .. 1941027 -  -3.7  -4.07568   GGTTGCTCCGGAAAA               GGACG TCAA CGGCC                TCGTCGAGAAGCTGA  59 318
RTCIAT899_CH09640 1939100 .. 1939114 -  -4.2  -3.66178   CTTGGCAAGCGGAAA               TTTCGG TTT CCGCAA               AATTGTGGCCGTCAG  55 37
        sufB 1937336 .. 1937349 -  -2.3  -4.73613   CGAGCAGCAACAAAA               CGGCA CATA CGCCA                AGGGACGAAAGTACG  68 186
        sufC NONE
        sufD NONE
RTCIAT899_CH09620 NONE
RTCIAT899_CH09615 1933431 .. 1933453 -  -4.1  -4.08216   GCATCGGCCCGAAAA           GTGGATCCG GTTTT CAGATCCAG           CCGATGCCCGCTTAA  60 102
        sufA 1932972 .. 1932982 -  -3.2    -3.767   CATCCATCGATCAAA                 GCAC GAA ATGC                 AGCAAGGTGAAATAT  51 52
RTCIAT899_CH09605 1931783 .. 1931805 -    -7  -5.40474   ATTTTTGCAAAAAAA           GCGAAACG GTTCAGT CGCTTCGC           TGGAAACAGACATAA  95 409
RTCIAT899_CH09580 NONE
RTCIAT899_CH09575 1926409 .. 1926422 -  -2.3  -3.77484   GAGCAAAAGTGGAAA               CCGGA ATTG TACGG                TCGAATGATTTTCTG  52 43
RTCIAT899_CH09570 NONE
RTCIAT899_CH09565 1924587 .. 1924605 -  -4.4  -3.04515   AAAGATCGTTCAACA             GGTCGCGC ATG GCGTCACC             TCAGAGAATATGGCT  47 26
RTCIAT899_CH09560 1923815 .. 1923827 -  -4.7  -3.24825   ATCAACAATATTCAA                CTGCG AAG CGCGG                AAAAAACCGCGGCCG  49 9
RTCIAT899_CH09555 NONE
RTCIAT899_CH09550 1921608 .. 1921619 -  -5.8  -3.37796   GCGCACGACTGAGAA                CGTG AAAA CACG                 GCTTCTGACACCAGA  56 81
RTCIAT899_CH09545 1921111 .. 1921146 - -13.3  -2.59686   CGAGAGACGAATTTA    TTCGCCGGACCCGGC AATTTA ACCGAGCCCGACGAA     GAGACCGGTTACTTA  78 38
RTCIAT899_CH09540 1920220 .. 1920238 -  -6.7  -4.15664   AAAGGCATATAGAAA            GCACGCAG ACGA CTGCG-GC             GGCCAACATCCAAAA  70 417
RTCIAT899_CH09505 1913546 .. 1913560 -  -7.1  -3.12521   CTTATCAAAATCAGA               GGCGA AAAGA TCGCC               CATCGCAACGAACTG  52 205
        lipB 1911795 .. 1911818 -   -11  -2.83403   TTTTCGCCATCAAAT          CGGACAGGTC GTTT GACCTGTCCT           GCCTAGCACTAAAAT  69 86
RTCIAT899_CH09475 1910444 .. 1910463 - -16.4  -3.89938   ATAAGCAAACGGAAA            CGGGCGCC CGAG GGCGCCCG             CTCTGCAAGAGGTTG 100 50
RTCIAT899_CH09465 NONE
RTCIAT899_CH09460 1908222 .. 1908234 -  -3.3  -3.01712   TCTGGGCCGTCAAGA                CGCTC CTT GACCG                CCGCACAACCGTTCT  43 340
RTCIAT899_CH09440 NONE
RTCIAT899_CH09435 1903960 .. 1903976 - -10.9  -3.55084   GGGCAAGATGAAACA              GAAGAGC TTT GCTCTTC              ATCCGCTGCATGAAG  74 222
RTCIAT899_CH09395 1896382 .. 1896400 -    -3  -3.59979   CCCCCGGAGCTCAAA             CCGGCG CTTTGCC CGTCGG             TCGGTCGATCTCCTC  49 96
RTCIAT899_CH09390 1895745 .. 1895764 -  -7.8  -4.57837   AGATTCCGTGAAAAA            TGAACCGC TCCA GCGGGTCA             TCCGAAATCTGTAAT  83 132
RTCIAT899_CH09370 1892689 .. 1892709 - -12.6  -3.28712   GCTTTCTCCCCACAA            TCTCCCCC CTTGT GGGGGAGA            TGTCACGAAGTGACA  83 73
RTCIAT899_CH09365 1892173 .. 1892186 -  -8.1  -2.88861   GAGCAGCGCGACATA               GACCG CCAA CGGTC                AGGCAGCCTTTTGCC  59 24
RTCIAT899_CH09360 1891649 .. 1891662 -  -4.5  -3.34541   CTAGTAAAGGAAAAG               CGGCGC TAG GC-CCG               GATCATCTCGGCCAA  51 17
        thrS NONE
RTCIAT899_CH09350 1888433 .. 1888458 -  -5.3  -3.73647   CCCACCTATGAACAA         TTGGCGCCGGCC GCT GGC-GGCGACGA         CGGCGATAGCATGGA  58 121
RTCIAT899_CH09340 NONE
RTCIAT899_CH09335 1885938 .. 1885958 -  -7.5  -3.10715   TCTATGATCACGTAA            CGCCCCG ATATCGG CGAGGCG            ATTCTTGCCCCGCAA  57 128
RTCIAT899_CH09330 1884734 .. 1884779 -    -2  -3.62354   GCGCGAAATCAAAGA CCTAAAGCGCCGGAAGCGAATCT GAA AGA-TCGCGAC--GCGCTTTAGA ACGCCGGCTGGATAT  50 40
RTCIAT899_CH09325 1883946 .. 1883956 -  -4.6  -3.30124   TTTCATTGTCGACAA                 GACG CTT CGCC                 CCAAACTCGTTGGCG  49 257
RTCIAT899_CH09310 NONE
       tpiA1 NONE
RTCIAT899_CH09300 1878017 .. 1878040 - -14.6  -5.19275   ATGGACAAAACAAAA          CCGGCAGATC CGAG GACCTGCCGG           GGATGATCTTTGGCG 100 48
        pyrG 1876265 .. 1876297 -  -9.9  -4.65263   ACTGCGTAAAACAAA      GATGTAGAGCGCTTC GGT GAAGTGCTCTATACC      AGCCGGCTCTGTTCC  91 19
RTCIAT899_CH09285 1874712 .. 1874742 -  -7.5  -4.57569   GCAGTGTCGTAAAAA      TGGGCAGACCCGGC ATAT GCCA-GCCTGCCCT       CGCGTTCAGCCCTTC  83 31
        hoxN 1873534 .. 1873548 -  -3.4  -2.81208   GTCCAGTCAAAACAT               GCTCGA TCC CCGGGC               GCAATGATGCGTCAT  41 37
RTCIAT899_CH09275 NONE
RTCIAT899_CH09270 1870726 .. 1870737 -  -7.2  -3.33261   TTCGAATCGGCAGAA                GCGG CCAG CCGC                 ACGAGGCGGCGCAGA  56 356
RTCIAT899_CH09260 1869145 .. 1869158 -  -5.2  -3.02511   CGGATGCGCTGAAGA               CGGC ATTAAA GCCG                ATCTTTGCCAGCGGA  46 343
RTCIAT899_CH09250 1866954 .. 1866964 -  -5.4  -3.75332   ATCGGCCAACCGAAA                 GTTG GAA CAAC                 ACTCTTCCACGTTGT  60 207
RTCIAT899_CH09230 1863649 .. 1863672 - -14.6   -4.7254   AGGGGGCACGAAAAA          GCCGGG-GGGT TTG ACCCACCCGGC          TCGCAATCATCAGAT 100 56
RTCIAT899_CH09200 1857568 .. 1857588 -  -9.7  -5.63103   GTTCAATCAAAAAAA            GCGCAGC TCACTCG GCTGCGC            CTTTGAACAGATTCG 100 64
RTCIAT899_CH09195 NONE
RTCIAT899_CH09190 NONE
RTCIAT899_CH09185 1854004 .. 1854029 - -17.6  -5.38047   TATGGATATAAAAAA         GACCGCCGGG GTGGTG CCCGGCGGTC          GTCTGGCCACGCAGT 100 161
RTCIAT899_CH09180 1853381 .. 1853405 -  -8.5  -2.52543   ATCCTGGTCAAGTCA          TGACCTCCACC AGA GGTGGAGGTTT          GAAACGCTGCGCTTG  56 68
RTCIAT899_CH09160 NONE
RTCIAT899_CH09155 NONE
RTCIAT899_CH09150 1847813 .. 1847838 -  -5.3  -3.09987   TTAAGATTCAGGCAA         TGACGCCGATC AATC GACCTGCGTCG          TACCCTGATGCTGGC  50 9
RTCIAT899_CH09145 1846453 .. 1846480 -  -9.2  -3.17075   TCCTGTTTAACCCAA        GACATGCCCAGGT GGA ACC-GTGCATGTC        CCGGTCTCCGCCACT  65 85
         tmk NONE
RTCIAT899_CH09135 1844473 .. 1844483 -  -6.8  -3.07962   TTCCACAGCCTAAGA                 GCTG CGG CAGC                 TTCGAATGAGACCGA  54 223
RTCIAT899_CH09130 1843480 .. 1843496 -  -6.5  -3.45945   CTGAGGGATAAGCAA              TCGGCCT TAA AGCCCGA              ACGCTCGCTTTTCGC  58 15
        metG NONE
RTCIAT899_CH09110 NONE
RTCIAT899_CH09105 NONE
RTCIAT899_CH09100 1837579 .. 1837600 -  -3.5  -3.06915   AGGGACCCCATGCAA           TCGCTGCCG GCGC CGGCTGCAT            TCGTTATTCTTAGAG  45 136
RTCIAT899_CH09095 1837038 .. 1837048 -  -5.4  -2.74597   TCCATATAGATACCA                 CGAT AGG ATCG                 ACATTTTTCGCTTTT  47 39
RTCIAT899_CH09080 1834357 .. 1834373 -  -7.9  -3.09491   GACAGACCGATGCAA              GCAGCGG CCA CCGTTGC              AGGTAGAGGTCGGCG  56 222
RTCIAT899_CH09070 1833156 .. 1833168 -  -9.1  -3.33696   GCCTTGTGCAATGAA                GCTGC TGC GCAGC                ATAACCTCTCCAACC  63 191
RTCIAT899_CH09060 NONE
RTCIAT899_CH09055 NONE
RTCIAT899_CH09050 1828222 .. 1828253 -  -7.9  -3.53224   CATGTGCGCCGGAAA      GGCGGCCGCCG GAATAGCTGG CGATGGCCGCC       GGTCGCCAAAACCAC  62 44
RTCIAT899_CH09045 1827874 .. 1827886 -  -4.7  -3.02511   CCCAGTCCGCCAACA                CTGCG TCC CGCCG                TCTGCTCGAAAGGTT  46 125
RTCIAT899_CH09035 NONE
RTCIAT899_CH09030 1825430 .. 1825473 -  -2.4  -5.27938   ACGGCGAAAGAAAAA GCGCGC-ATGTCCGTCCCCA GCCATA TGGAGAAAG-CTTAGCGCGC TTTGATCGCAAGCAG  78 47
RTCIAT899_CH09025 1824961 .. 1824986 - -11.9  -2.89564   GTCGCAGTTCATACA         GCGCGTTTTTC CTAG GAAAGACGCGC          TGTTTTGCTGTTTGG  75 54
RTCIAT899_CH08985 NONE
RTCIAT899_CH08980 NONE
RTCIAT899_CH08975 1818233 .. 1818259 - -12.2  -5.49234   ATAGGCAATAAAAAA         CCGGACGCTGGC GGG GAAAGCGTCCGG         TTCAGGATCCATCCG 100 75
RTCIAT899_CH08970 1816772 .. 1816804 -  -9.8  -3.08371   GACACGTCGAAGACA      GGGGAAATCGGCGA GCTCG TCGCCGCCTTCCCG      GTCGAGGATGGCGAT  64 431
RTCIAT899_CH08960 1813388 .. 1813400 -  -4.8  -3.11988   GCTCATCGAATAAAC                CGTC TGACC GACG                CGCTTTTCATGAAAG  47 32
RTCIAT899_CH08955 1812641 .. 1812656 -    -9  -2.91695   GGTAGCCCCAAAGCA              TCCACG ACGG CGTGGA               TCTTGGTGCCTAGCC  62 35
RTCIAT899_CH08950 1811910 .. 1811921 -  -5.8  -3.44229   ATGGCAGGACCAGAA                CGGT CAGG ACCG                 CTACTCGACCGAAGT  55 387
        uvrA NONE
RTCIAT899_CH08935 1807352 .. 1807377 -  -9.7  -3.37796   CGCGATCATCTATAA         GGGCGCCGA-CA GCG TGATCGCCGCCC         CCGATGGCAGGGCCT  63 246
RTCIAT899_CH08925 1805408 .. 1805429 -  -9.4  -2.76442   ATGACGATTGAACGA           GCCGCGGCC TGAAG GGCCG-GGC           GGATTAGATGGCGTC  60 29
        glnA 1803928 .. 1803946 - -17.4  -3.80573   CTCATTATGAGGAAA             GCCCCGGC AAG GCCGGGGC             TTTCACAACTGATGT 100 40
RTCIAT899_CH08915 1803370 .. 1803394 - -14.3  -5.33026   GAAGCCAAATAAAAA          GGGAAGGCGTT GGG AGCGCCTTCCC          TTTGGAATAGGATAG 100 54
RTCIAT899_CH08905 1800538 .. 1800555 -  -5.5  -2.62515   AACCGGCCGAGATTA             TTGGACG GAAG CGTCCCA              CCACGCCGGCAGATA  46 5
RTCIAT899_CH08900 1799758 .. 1799769 -  -2.2  -4.68593   GCTATGATCGAAAAA                GC-GG AAT CCTGC                TTAGTTCATCGCCGC  68 26
RTCIAT899_CH08890 NONE
       ubiA2 1797188 .. 1797198 -  -2.4  -3.89614   GCCAACGTCGAGAAA                 CTGG ATG CCGG                 CCCGAAGGGTGTCGT  54 276
        recG 1791282 .. 1791308 - -16.6  -3.35046   TGATGTTTTGAAACA         GGATGGGCGCAG TCG CTGCGCTCATCC         GCTTACCCCGCTCGC 100 28
RTCIAT899_CH08790 NONE
RTCIAT899_CH08775 1769086 .. 1769096 -  -2.4  -5.06414   CCTCTTTAACAAAAA                 GGAG GCA CGCC                 TTGGCACAGGATCGA  74 415
RTCIAT899_CH08765 1768700 .. 1768746 -  -4.3  -3.32343   TCGAGATCCCGATAA CGTTATTACCGCGCTCG-CCTC CGCG GAGGTCGTGACCGGTACTTACG CAATTGTTGAGAGCG  51 21
RTCIAT899_CH08755 1767529 .. 1767540 -  -7.2   -3.5525   AGATAGGTCGCCAAA                CGCC CTTA GGCG                 AAGGTGCGGATTTTT  62 443
RTCIAT899_CH08745 1766711 .. 1766736 - -12.6   -5.4833   TCACGCAACAAAAAA         GGGAAGGCGA TTTGCT CCGCCTTCCC          TTTTTTCCTCTTCCC 100 70
RTCIAT899_CH08740 1766319 .. 1766341 -  -7.6  -3.59979   TCGCCTTACCGGAAA           TCGTCGTTCC CAG GGGCCGACGA           TTTCCGGATATTTCG  62 66
RTCIAT899_CH08735 1765555 .. 1765578 -  -3.6  -4.08317   CAATGCTAAATGAAA          GGCGGTTTCG GCAA CGGGGCCGCC           TTTTTCATGCGTTGT  60 30
RTCIAT899_CH08705 NONE
RTCIAT899_CH08700 1758734 .. 1758747 -  -8.1  -3.06315   CGAAGACTGGGAATA               GGCGT TTTT ACGCC                GTTTTGACTCCGGCA  60 19
RTCIAT899_CH08655 NONE
RTCIAT899_CH08650 1746343 .. 1746353 -  -2.4  -3.90922   AGTGCTCTTAAACAA                 GGCG GAG CGCG                 CGATTGACGTGAAAT  54 253
RTCIAT899_CH08635 1744822 .. 1744839 -  -3.3  -3.74747   TCAAGTCCTACGAAA             CCGTGGC TTAC ACCAAGG              GCTTCCTCATGGTCG  54 184
        lexA 1731982 .. 1732001 -  -2.8  -4.07568   GGCCGTGCTCGAAAA            CGGCG-CCA TAC TGGTCACCA            TCGAGAACGCAGCCT  57 314
        gltA 1728219 .. 1728237 - -14.6  -3.54424   GCGCAGCGTTTCAAA             CCTCCACC TCT GGTGGAGG             TCATGACTTTCAATA  95 48
RTCIAT899_CH08480 NONE
RTCIAT899_CH08475 NONE
RTCIAT899_CH08470 NONE
RTCIAT899_CH08465 1709377 .. 1709412 -   -12  -4.85599   GTGATTTGAGAAAAA    TGAAACGGCTGCATTA GAGA TAATGCAGCCGTTTTT     ATATGGTTATAAGAA 100 74
RTCIAT899_CH08435 1703006 .. 1703027 -  -3.5  -4.43213   CCGAACAGACGAAAA           GCGACCGTC AGGC GCTGGCCGC            CTGCATCCAGGGCTC  65 272
RTCIAT899_CH08425 NONE
RTCIAT899_CH08420 1700457 .. 1700474 -  -3.3  -3.78953   AGCGTCATCAGGAAA             GCGCGCT TGCG ATCGCAC              AATGGCTCGAGGGCA  54 391
RTCIAT899_CH08410 1698204 .. 1698223 - -13.6  -3.05384   GTTTTCTTGAGGGAA            GAGAGGCG AAGC CGCCTCTC             TCTTTAAGTTAGGCC  84 56
RTCIAT899_CH08405 NONE
RTCIAT899_CH08400 NONE
RTCIAT899_CH08395 1694962 .. 1694985 - -14.6  -5.93809   GGCCTATAAAAAAAA          CCGCCGGCTGC GAT GCAGC-GGCGG          GTTTCGTTCATTCGA 100 52
RTCIAT899_CH08390 1694405 .. 1694428 -  -9.5  -3.08133   CAGGCACTTATTGAA          CGCCGCCCA TTGAGT TTGGCGGCG           GTTTCAGGCATGTGT  67 205
RTCIAT899_CH08360 1691158 .. 1691175 -  -6.9  -4.36914   GGGCGGCGTAGAAAA             GGCGGCA GAGA TGCCGCT              TTTTTATTCCTTGAT  74 29
RTCIAT899_CH08340 NONE
RTCIAT899_CH08335 1688926 .. 1688936 -  -3.2  -4.61482   CCCTTCAAAAAAGAA                 TCGC TTT GCAA                 TCAATATGATTCCTG  67 224
RTCIAT899_CH08330 1687729 .. 1687757 -  -3.8  -3.96624   CACCGCCACCACAAA       GCGCGCC-GCCGGT CTC ACCACCCGGCG-GC       TTTTTCGTTGATGTA  58 379
RTCIAT899_CH08320 1686797 .. 1686833 -  -6.6  -4.00486   TCCATAAGAGAATAA   TGA-TCGCTCGCCGGCA CAAA TGCCGGAAAGCTATTCA    TCGTCTCCTTGATGT  68 125
RTCIAT899_CH08315 NONE
RTCIAT899_CH08310 NONE
RTCIAT899_CH08305 1685331 .. 1685344 -  -9.5  -4.11484   CGCAACCCGCTAAAA               GCGCC TGAT GGCGC                CAGTTTATGAGTCTT  83 142
RTCIAT899_CH08295 1684254 .. 1684266 -  -6.3  -3.81447   GATAGCCCACAACAA                GATCA TCG TGATC                GACGGCCATCTGACC  60 266
RTCIAT899_CH08285 NONE
RTCIAT899_CH08280 1682613 .. 1682636 - -15.3  -4.33956   GGCAAAACACACAAA          GGCGTGCCG AATCAA CGGCACGCC           TTTTTTGTCGCAAAA 100 276
RTCIAT899_CH08275 1682267 .. 1682295 - -16.1  -3.53224   TAGCCGCTGCGGAAA        GAGCAGCCGAC CATAGAC GTCGGCTGCTC        CATAGCGTTACTTTG 100 33
RTCIAT899_CH08120 1652855 .. 1652865 -  -8.2  -3.29144   CGATGCGCTTGACAA                 GCGC CGA GCGC                 TGATGACGGATTGGG  59 120
RTCIAT899_CH08105 1650176 .. 1650212 -  -8.8  -2.89564   TGCTGATCGCACATA   GGACGTTCC-CTGCAAA AAGG TTTGCATCGGAACGGCC    TCCTGCGAGGGACGA  62 192
RTCIAT899_CH08100 1648961 .. 1648972 -  -2.2  -4.12198   GAGAACTGTGGAAAA                CGTCG AGC CG-CG                CGATTGGCACGCCCT  56 436
RTCIAT899_CH08060 1641553 .. 1641572 -  -7.8   -2.6186   AGGGAATTGCATAAT            CGGGCG ACTGCCTA CGCCCG             CTCCAGGACATAGCT  54 17
        sfsA NONE
RTCIAT899_CH08050 NONE
RTCIAT899_CH08045 1639049 .. 1639060 -    -3  -3.49387   AAAAATATAAATATA                TCAA AAAT TTGA                 GTTTTATTTTTAACT  49 68
RTCIAT899_CH08040 1638169 .. 1638183 -  -6.4    -3.406   GGAATAGGGAATCAA               TGTCGC AAT GCAACA               TGCACTCCGTCAACC  56 86
RTCIAT899_CH08035 1636677 .. 1636712 - -17.6  -3.05384   CTGCCCCTGATCGAA    GCCCTTGCGTGAGGCC TACC GGCCTCAAGCAAGGGT     GAGATTTCACGGACG 100 44
RTCIAT899_CH08000 1631283 .. 1631299 -  -2.9  -4.67038   CCGCGAAAACTAAAA              GCGCGAA AGC TTCATGC              CACCTATGCGCCGTG  67 121
RTCIAT899_CH07995 1630966 .. 1630999 - -16.7   -5.1287   TCGATAGGCAAAAAA     GAACGCCCGCCGCGG AGGT CCGCAACGGGCGTTG      AGAAGGCTTTCGCTA 100 63
RTCIAT899_CH07990 1630540 .. 1630557 - -14.1   -4.8622   GGCCGGAATCAAAAA             CGGCGCC AAAA GGCGCCG              TCTTGAGGCAGTCTG 100 56
       trmFO 1628994 .. 1629038 - -15.9  -4.12603   GTCAGGAAACAAGAA GATAGAGCGTTTTGGCTATTC GAA GAAAAGCGAAAACGCTCTAGC TCAGGCGCTTTCCGC 100 26
RTCIAT899_CH07955 1622925 .. 1622942 -  -9.8  -4.58663   AGGACTCTGCAAAAA             GCCCGG TCAATG CCGGGC              TTTTTGTCGTTTATG  91 62
RTCIAT899_CH07885 1606887 .. 1606914 - -12.6  -4.14243   CAGCCCATGTGAAAA        CCGGCCCGGAGC GAAG GCTCCCGGTCGG         TCATCAAATTGTGGA  95 56
RTCIAT899_CH07880 1605715 .. 1605725 -  -3.2  -4.18934   CAGCAGGCCAAGAAA                 TGGC TGA ACCA                 GGCGCGCAAAAGCGG  62 324
RTCIAT899_CH07850 1596963 .. 1597007 - -10.2   -4.2828   TCGCATCCATCAAAA GCAAAA-GCGGTCCAGTCT AGGGAAAA AAACTGGGCCGCCTTTTGC TGGACTAGAGGTCAA  90 125
RTCIAT899_CH07840 1594443 .. 1594469 - -12.2  -5.21709   TGTTACAGTAAAAAA         GGGGGGCGGC AGGGAAA GCCGGCCCCC         TTCCTTCTCTGATCG 100 60
RTCIAT899_CH07835 1593826 .. 1593865 - -22.2  -4.08064   AAGTTCCTCTTAAAA  CAATAGGGCCGCCGCCGG AGTT CCGGTGGCGGCCTTATTG   TTTGTGTTATTCCTC 100 134
RTCIAT899_CH07815 1591636 .. 1591656 -  -3.2  -3.80276   ATGCACATAATACAA           TGCCGCCGT CCGA ACG-CGGCC            ATCTCGCCCCGGCCT  54 453
RTCIAT899_CH07805 1589795 .. 1589820 - -21.9  -3.44146   TGCCTTCATAACGAA         CGTCCGCCGGG AAAC CCCGGCGGACG          CTGTTCTGTTACGAG 100 50
RTCIAT899_CH07800 NONE
RTCIAT899_CH07795 1587934 .. 1587948 -  -5.7  -3.72576   CGGCGCGGCAGGAAA               CGAGA TTACT TCTCG               GTTGCGATCAGCCCA  60 16
RTCIAT899_CH07785 1584881 .. 1584929 - -12.3  -3.15544   GGGGAGCGGCAGCAA GCGCCGACCGGCCGGGC-CGCA TATTAC CGCGCACCCGGCCGAATAGCGC CTATCCATCATCTTT  76 26
RTCIAT899_CH07770 NONE
RTCIAT899_CH07765 NONE
RTCIAT899_CH07760 NONE
RTCIAT899_CH07755 NONE
RTCIAT899_CH07750 1579856 .. 1579870 -  -9.2  -3.21099   GGGCCGCATCACCAA               CCGGCC GGT GGCCGA               AGCGCTCGGCTATGA  61 95
RTCIAT899_CH07740 1577859 .. 1577871 - -10.5  -3.17723   GGATCTGGAAGGGAA                GGGCG ATA CGCCC                GCCCGTCGTCATCAG  65 344
RTCIAT899_CH07730 1576839 .. 1576854 - -11.8  -2.78816   TTATTGTGGATCATA              GCCGGC TTGT GCCGGC               ATTCGATCAGCGCTT  72 32
RTCIAT899_CH07725 1574693 .. 1574720 - -13.5  -4.65895   CGGCGGAGTGAAAAA        GTCCTCTCCCC GAATGA GAGGAGAGGAC         GATAGCATCCTTGAT 100 40
RTCIAT899_CH07715 1572922 .. 1572943 - -17.3   -3.9749   AGGCACAATAGCAAA           GCGGCCGGT TTTA ACCGGCCGC            CTGTGATCATCTGAA 100 52
RTCIAT899_CH07705 1571070 .. 1571106 -  -4.2  -4.18018   GGCTGGCACGGAAAA    GTCCGGCGGCTCGACA GTCAG CGTCGAGCCCCAGGTG    CATGCCGGCTGCACG  65 373
RTCIAT899_CH07690 1568630 .. 1568642 - -10.5  -3.29459   CACGGAAGAAGTCAA                GGGCG GCT CGCCC                TACGGCGCCTCCACC  68 399
RTCIAT899_CH07675 1567100 .. 1567119 -  -2.8  -2.84745   CCGCTACAAGATAAT            GCTCTGAA TGGT CTCAGAGT             TCCCCGGAAGTACAC  41 55
RTCIAT899_CH07670 1565935 .. 1565953 -    -8  -2.79183   GCGACCCTGAGCAGA             CCCCGCGC TGG GCGCGGAC             CAAGAACCAAATCCG  57 261
RTCIAT899_CH07665 1565259 .. 1565288 - -14.3  -3.73775   CGCATTCCCATCAAA       GCGACGTCCACTA AATC TAGTGGGCGCCGC        AGCGCCCACCTCTAT  95 113
RTCIAT899_CH07660 1560568 .. 1560589 - -14.5  -4.13767   TTCGTGATCGCAAAA           GCCGAATCC AGTA GGATTCGGC            TTTTGTATTTCCAAG 100 239
RTCIAT899_CH07655 1559683 .. 1559716 -  -9.5  -2.58822   CGGTTTACATAATAG     TTTCAGCCCCAAGCA GAAA CGCCTGGGGCTGATT      TTGGCTCCCATATCT  63 84
RTCIAT899_CH07650 1558206 .. 1558219 -  -6.7  -2.54192   GACATGATGACGAAG               CGATG TTTA CATCG                GATTGCGGCATTGCT  48 209
RTCIAT899_CH07640 1554746 .. 1554762 -  -5.1  -3.21099   GCCGCCCATCATCAA              TCTCGAC GAT GCCAAGA              AAAACTATTTCCAAT  48 523
        panE 1549339 .. 1549355 -  -5.8  -4.51174   GCAGCACAATGAAAA              GCTCGA GGGCG CCGAGC              AGCAGGCCGAAGGCG  73 392
RTCIAT899_CH07610 1548153 .. 1548164 -  -3.6  -3.53012   CTCGTTGCGCGCAAA                CGCG ACGG CACG                 AGGGCGTTGGAGAGG  51 220
RTCIAT899_CH07605 NONE
RTCIAT899_CH07600 1547292 .. 1547305 -  -6.7  -2.89564   GCGCTAGTCCATATA               TCACC TGGC GGTGA                TGGATTGCCGCTATG  53 36
RTCIAT899_CH07585 1543834 .. 1543876 - -12.9  -3.33696   CTGGGTGGCAAGTAA CCAAGT-C-CCTTCGCCCCGT GAA ACGGGGAGAAGGTGGACTTGA GCGGTCGAGCGGAGC  84 194
RTCIAT899_CH07575 NONE
RTCIAT899_CH07570 1539988 .. 1540015 -  -8.4  -3.15544   GTCGAGGTGCAGGAA        CAGAGCCAGGCGA AGA TCGCC-AGCGCTG        CGGAATGATTCTCGC  60 62
RTCIAT899_CH07385 1515537 .. 1515558 - -17.3  -4.77757   TGTGAAAAATCAAAA           CCGCCCGGA GCGA TCCGGGCGG            TTTCTTTTTATGCGA 100 92
RTCIAT899_CH07320 1498893 .. 1498916 -  -8.8  -3.34398   CGGGCTCGGGAAAGA          CCGCGATCGC GCAG GCGATCGCCA           GGGACCATGCCTCTA  66 482
RTCIAT899_CH07290 NONE
RTCIAT899_CH07285 1494159 .. 1494173 -  -6.4  -3.72051   CCCAAGAAGCCTAAA               CTCGAA CAC TCCGAG               CTTTCGGGTGAGTTC  63 393
RTCIAT899_CH07270 1492911 .. 1492926 - -11.8    -4.614   TTCAAGCATAGAAAA              GCCCCG GAGA CGGGGC               TTTTTTTCATGGTGC 100 90
RTCIAT899_CH07245 1484069 .. 1484092 -   -16  -5.00138   GACGGAAACGAAAAA          TCCGGCCGCG TCGC CACGGCCGGA           TTTTGTCAAATTATT 100 55
RTCIAT899_CH07235 1481736 .. 1481748 -  -3.3  -2.89602   GGCCCTATAGGAAAG                CCCCG GTG CGAAG                GTTGCGTGCCTCTAG  42 78
       aroQ1 NONE
        accB 1480730 .. 1480743 -  -2.3   -3.9243   GAATCTTCGAAATAA               TGGGC ATGG GCCGA                CCTTACTCGATGACG  54 28
        accC NONE
         aat 1478599 .. 1478634 - -12.6   -3.2794   CCCGATGGACATGAA    CATGCATC-GGACGGCA TCT TGCCGCCCTGAGGCACG    GGGTGATTTCGATGA  83 142
RTCIAT899_CH07210 1477686 .. 1477707 -  -3.6  -4.42639   AGAGTGCAAGCAAAA           GTCCGACG TTCCGG CGCCGGAT            ACCGCTGGCGCGAAG  66 116
RTCIAT899_CH07175 1472820 .. 1472847 -  -6.4  -4.18488   AGCGATCTGAAGAAA        CGCTATTTG-AAG GCT CTGGCAAATAGCG        AGGATCAAATCGCGG  71 202
RTCIAT899_CH07150 1467299 .. 1467328 -  -4.2  -3.53444   GCATTCCGCCGGAAA       CCATCCCGC-CGC TGGTC GCGCGCGCGATCG       CCTTCGACAGCCTCC  52 102
        pyrB NONE
        pyrC NONE
        plsY NONE
RTCIAT899_CH07105 1459391 .. 1459404 -  -5.3  -3.09933   TCGGAATCGATTGAA               GCATA AAAT TATGC                GGCACCTTTAACGTG  50 140
        topA NONE
         rnr NONE
RTCIAT899_CH07090 1453649 .. 1453659 -  -8.2  -3.58726   GTTTCCGATATAGAA                 GCGC AAT GCGC                 GGAAGCAATCTCTGC  65 79
RTCIAT899_CH07085 1452153 .. 1452185 - -15.5   -3.9407   TTTAATAAAAATGAA      CGCCGTGGACGGCCA GTG CGGAGGTCCACGGCG      AATTCTGGCGCGAAA 100 62
        rpmG 1451909 .. 1451931 -  -7.7  -5.86976   TTATAAAACAAAAAA          GGCGCCAACC CGAA GGTCG-CGCC           TTTTTGTAACCTGAA 100 52
RTCIAT899_CH07075 1451779 .. 1451806 - -15.6  -4.18018   GGCCCCCATTCAAAA        CGCCGCTCTTCA TTTC TGAAGGGCGGCG         TTTTTCTTTTGCCGT 100 7
RTCIAT899_CH07070 1451270 .. 1451281 -    -3  -4.86731   CTGGTTCAAAGAAAA                TAAG AATA CTTA                 TACTTTCGATTTTGG  74 299
RTCIAT899_CH07055 NONE
RTCIAT899_CH07050 NONE
RTCIAT899_CH07040 1446290 .. 1446303 -  -3.1  -4.67353   CGATGCAGCCAAAAA               TCACC ATCT GATGA                CTTATGCTAAATAAT  67 43
RTCIAT899_CH07035 1445017 .. 1445066 -  -5.6  -3.07994   CCGAACGCGAGCCAA TGTGGCATCGCCGAAGCGGAGC GTTCAA ACTCTGCTTCGGCGATGATTGA AATCTTGAACTGACA  50 46
RTCIAT899_CH07020 1442268 .. 1442321 - -10.5  -3.90048   CTTGCCGGAAAAATA CCGCATCACGCCCGAGATCGCCGC-CGC ATT GCGCACGGCG--C-CGGGCGTGAT-CGA CGTGGAGCTGGTCTG  80 104
RTCIAT899_CH07010 NONE
RTCIAT899_CH07005 1436899 .. 1436916 -  -9.1  -2.78463   ACTTGTCTGACGATA             GACGCAC GGCC GTGCGCC              GCAGCGAGATCGGCT  57 456
RTCIAT899_CH06980 1432447 .. 1432463 -  -7.9  -3.13403   TCTCGTCGATGAACA              CGAGCCG CTC CGGGTCG              AGATCGAGTTGGTCC  57 87
RTCIAT899_CH06975 1431684 .. 1431733 -  -2.9  -3.61398   CTTCCTGGCCAAGAA CCCGGATGGCGGCATGCACCACAT TTGTT ATGAGGT-C--GCCGACATCCGCG CGGCTCGCGATAGAC  49 233
RTCIAT899_CH06830 1395506 .. 1395524 -  -4.5  -4.62336   ATTCGAGGTTAAAAA             GCACGGA TTTTC TCCGTCC             CTTCTATCCGTTGGG  71 151
RTCIAT899_CH06825 NONE
RTCIAT899_CH06820 NONE
RTCIAT899_CH06815 NONE
RTCIAT899_CH06810 NONE
RTCIAT899_CH06805 NONE
RTCIAT899_CH06800 NONE
RTCIAT899_CH06795 1387366 .. 1387381 -    -9  -2.91695   GGTAGCCCCAAAGCA              TCCACG ACGG CGTGGA               TCTTGGTGCCTAGCC  62 35
RTCIAT899_CH06790 1386948 .. 1386988 - -12.7  -3.37164   GTAAAAACAGGAACA  TAGAGCATTTTCGCGATTC GAA GAAAAGCGGAAATGCTCTA  GGCTATGGTGACGAT  84 45
RTCIAT899_CH06775 1380924 .. 1380942 - -12.4  -3.03243   ATTGATTTTCGAATA             GCCGGAAC GTG GTCCCGGC             TATTCATGCCAAAAT  76 45
RTCIAT899_CH06770 1380041 .. 1380071 -  -8.9  -4.15235   AACCTCGAAAAAATA       GATGCCCGCTCCA AACCG CGGAGCCGGCGTC       GGATGGCTGCTTGAG  80 101
RTCIAT899_CH06760 NONE
RTCIAT899_CH06755 1378241 .. 1378264 -  -9.4  -2.52623   CGGGGTGGACAAGAT          TGGGGCCCGC GAGA GCGGGCCCTT           TTTTATGGGTGATTT  59 111
RTCIAT899_CH06730 1370904 .. 1370922 -  -8.8   -3.5936   GTCAAATTTGCGAAA             GCGCGC TATTCAG GCGCGC             TTTTTGCGTTGGGGA  68 116
RTCIAT899_CH06690 1363520 .. 1363534 -  -4.2  -4.99056   CAATACAACCAAAAA               TTTCCC TGG GGGAGA               ATGGATAATTCTACA  80 493
RTCIAT899_CH06680 1362159 .. 1362176 -  -9.1  -4.87389   CACGCCAAAAAGAAA             GCAGCCC GGAA AGGCTGC              GATCCGAGGAGGCTT 100 152
        rplM NONE
        rpsI 1361080 .. 1361098 - -17.4  -5.24796   TGGATATAAGAAAAA             GGCCGGGG AAA CCCCGGCC             TTTCCGATAATCCGA 100 55
RTCIAT899_CH06665 1360451 .. 1360482 -  -6.6  -4.30978   TTCAATGCAGCAAAA      GTCATGACCTCCACC AGA GGTGGAGGTT-TGAA      ACGCTGCGCTTGAAC  74 65
RTCIAT899_CH06660 1360061 .. 1360073 -  -3.3  -2.73771   GGAGAGCGGTCAAAT                CTCGA AAT TCGGG                CTGGAATCGTAAACT  41 53
RTCIAT899_CH06655 NONE
RTCIAT899_CH06650 NONE
        argC 1357597 .. 1357624 - -19.9  -4.14243   CATTTGACGTGAAAA        GGCCCGGCCTG AATAAA CAGGCCGGGCC         TATCGAATTTCAATC 100 55
RTCIAT899_CH06640 1355899 .. 1355919 - -15.5  -2.87344   GATCGTCGTGAGAGA            TTGAGGCGC TGT GCGCCTCAA            ATCCCTTTAGCGTGC  87 32
RTCIAT899_CH06630 NONE
RTCIAT899_CH06625 1353024 .. 1353036 -  -6.3  -3.13403   GGCCGGCTACGAACA                CATCA TCC TGATG                TCCGGCTGGCGCGAG  50 77
RTCIAT899_CH06615 NONE
RTCIAT899_CH06610 1348834 .. 1348859 -  -6.9  -2.78816   GTAGTGTTCATGACA         GCTTATCCGAT CGTT ATCGGACAAGG          CCTACCAGATATCAG  52 72
RTCIAT899_CH06605 NONE
RTCIAT899_CH06600 NONE
RTCIAT899_CH06595 1344750 .. 1344765 -  -3.2  -4.08216   GCATCGGCTCGAAAA              GCGGAA CCGA TTTCGC               ACGAAAATCCGATGC  58 45
RTCIAT899_CH06590 1344055 .. 1344082 -    -4  -3.28712   GCCTCCGTTTCACAA        TGGCTGGCCGCT CGTG AGCGTCCACGCA         CCAAGGGTCGGCTGC  47 373
RTCIAT899_CH06575 NONE
RTCIAT899_CH06570 1341304 .. 1341314 -  -8.2  -4.15396   CTCTAAACGAAACAA                 GCCG TTT CGGC                 AGGTCGGGGCGTAGC  77 143
RTCIAT899_CH06555 1340187 .. 1340213 -  -5.7  -4.14874   ACAACAGGCTGAAAA        CCAGGCCGCCGC TTTG GCTGCCGCC-GG         TATCATCGGTGGCGT  68 205
RTCIAT899_CH06510 1332964 .. 1332998 - -15.1  -4.30448   AAACGGAATGCAAAA     GAAAACCCGCGAGAC GCCAT GCCTCGCGGGTTTTT     CGTAGAAACGGTATC 100 46
RTCIAT899_CH06490 NONE
RTCIAT899_CH06485 NONE
RTCIAT899_CH06480 1327826 .. 1327841 -    -6  -3.61517   AGCTCGCCGCAAGAA              GGCGTC GATC GGCGCC               TTTCCGGCCTACGCA  57 34
        hemB 1318798 .. 1318812 -  -3.5  -4.03586   CGGCAAATACAATAA              GC-CGG CAGC CCGAGC               TATTTCTTCGCAAGA  58 25
RTCIAT899_CH06430 1318217 .. 1318246 - -10.7   -3.6269   CCATGCACAGAAATA       TCTCCCGC-GCGCC AGT GGCTCCGCAGGAGA       TCCGTGCGGTGTCCC  76 57
RTCIAT899_CH06425 NONE
RTCIAT899_CH06420 NONE
RTCIAT899_CH06415 NONE
RTCIAT899_CH06410 1315677 .. 1315693 - -12.3  -3.17982   ACAAAGCTTGAGCAA              TCGACCC AGC GGGTCGA              TTGCAGCGACGAATG  78 93
RTCIAT899_CH06400 1311925 .. 1311946 - -13.7  -4.56914   TGAGGCAAAGGAAAA           CCCGGCGAC CGAG ATCGCCGGG            TTTTGGATGGTTCAA 100 52
RTCIAT899_CH06390 1309966 .. 1309988 - -13.4   -4.4518   AATCAAAATGCAAAA           CCCGGCGACC GAA AATCGCCGGG           TTTTTGTTTGGGACG 100 51
RTCIAT899_CH06380 1307700 .. 1307712 -  -5.5  -3.06796   CTCGATGGCATGTAA                GACGA TGC CCGTC                GAGCTGAGTAACAAT  50 271
RTCIAT899_CH06375 NONE
         rnd 1303953 .. 1303967 -  -3.5  -3.85698   TTTTCCGCCGAGAAA               CGACG CCTGT CATCG               ACGCGGGATTGCGTC  56 183
RTCIAT899_CH06365 1302872 .. 1302886 -  -4.3  -2.81088   AATGCAGCCAACAAT               TCGTA TTGTT TACGA               TCTGCCGCGAACGGT  45 20
RTCIAT899_CH06360 1301215 .. 1301241 - -17.4  -3.81146   GCTTCGAATGAAGAA         CAACCTTCTCCC CAA GGGAGAAGGTCG         CGCGCAGCGCGGGTT 100 143
        purM NONE
        purN NONE
RTCIAT899_CH06310 NONE
RTCIAT899_CH06305 1287885 .. 1287904 - -12.1   -5.1963   TGGAATGAAGAAAAA            GCCGGGG TTTGCG CCCCGGC             TTTTTTGTTTGCTCG 100 82
RTCIAT899_CH06295 NONE
        uvrC NONE
        pgsA NONE
        moaD NONE
        moaE 1282025 .. 1282038 -  -3.7  -2.72511   CCTATGTCCTCAAAT               GCACC GGAT GGGGC                CGCATCTGGCGTGCC  41 395
RTCIAT899_CH06265 NONE
RTCIAT899_CH06260 1280068 .. 1280088 - -10.4  -3.09208   AAATGACTCATGGAA            GCCGGGAC CTCGC ATCCCGGC            TTTTTTCATGCCAGC  69 311
RTCIAT899_CH06250 1278871 .. 1278896 -  -7.6  -3.53343   AACGTTTTGGCGAAA         GCGGAAAACA GCAATT CGCTTTCCGC          TCACATCCAGCGTGT  62 26
RTCIAT899_CH06245 NONE
RTCIAT899_CH06240 1276203 .. 1276233 -  -4.1  -2.64747   GTAGTTCATCAGAAT      CGCTCAACACT-AT GTCT ATGAAAGTTGAGCG       CATATTCTGCAGTTA  42 93
RTCIAT899_CH06235 1275238 .. 1275272 -  -7.9  -4.59376   ATCAGCAAACCAAAA    TACGGGCGTTGAAGCA ACCG TGCTTCCGCGC-CGTA     TTGGTCATAGATTTT  83 56
RTCIAT899_CH06230 1273007 .. 1273024 - -14.1  -2.62184   TCCCCCCGGATACGA             GCGGGCG GGTT CGCCCGC              TCTTCGTGATCACGG  81 127
RTCIAT899_CH06225 1271813 .. 1271850 -  -7.2  -3.14211   ATTCTCGGCCATCAA  TTCGCTTGGGCGGAGCTTG GGA CAAACTCCGCCC--G-GAA  AGGCTATGTCGCCAA  57 50
RTCIAT899_CH06220 1271267 .. 1271298 - -18.2  -3.75718   TTTAATTAAAAGCAA      GAATACCTCCTCCC TTTG GGGAGAAGGTATTC       ATCTGTGCCAAAATA 100 80
RTCIAT899_CH06205 1267708 .. 1267718 -  -4.6  -3.05596   CATCTCTCCAGTGAA                 GACG ATG CGCC                 ACGCTAGCACGCCGC  47 72
RTCIAT899_CH06200 1266713 .. 1266762 - -11.4   -3.0644   ATCGAAGCTTGAAGA CGCCCTGCC-GCCGCTGATCGACA AGAG CGTCGAAC-GTGGCTGGCAGGTCG CCGTGCAGATGCGCG  68 407
        lpxF 1264036 .. 1264062 -  -4.5  -3.44146   TTTGGCGACAACCAA         CTCGAAAAAAT TCGTT AATTTTCCGAG         ATTTTTCTGTCGTGT  51 13
RTCIAT899_CH06180 NONE
RTCIAT899_CH06175 NONE
RTCIAT899_CH06170 1259240 .. 1259261 -   -13   -4.2803   CACGTCAATGCAAAA           GAGCCGGC GATGAA GCCGGCTC            TTTTGCAGTTTCGAT 100 46
RTCIAT899_CH06165 NONE
RTCIAT899_CH06160 NONE
        ksgA 1256267 .. 1256277 -  -6.8  -2.81966   GTAAAGCTGATTACA                 GGCA GTT TGCC                 AGACGGCAGAATTCT  52 10
RTCIAT899_CH06115 1248272 .. 1248287 -  -6.8  -4.16016   TGACGGCCGAATAAA              CGGACA AACT TGCCCG               CTTATCCGTTTTGAA  70 59
RTCIAT899_CH06100 NONE
        rpsR 1245032 .. 1245053 - -14.5  -3.47349   TCGCGAAAGGGAGAA           GGGAAGGCA TCGC TGCCTTCCC            TCTAATTCAATCGGC  95 52
RTCIAT899_CH06090 NONE
        rplI 1243279 .. 1243299 - -11.1  -5.64873   GCCAATAACAAAAAA            GCCTGGGTC GAG GAGCCAGGC            TTTCTTTCATTCACA 100 62
        dnaB 1237978 .. 1238007 -  -3.5   -3.1996   CAAACCGCAATCGAA       GCCATTCCACCAGC GGT GCTGATGGC-TGTC       ATTGCTCCGACGGCT  45 229
RTCIAT899_CH06035 1234211 .. 1234224 -  -3.7  -3.37975   ATGGAGGAGCCATAA               GCGCC TCAA GTCGC                TGACAAGCGGCTAAC  49 36
RTCIAT899_CH06030 1233329 .. 1233352 -  -6.7   -4.7078   GGAACTAGGCAAAAA          CTGCCGCCA CATGTC TGACGACAG           CTTCCGGCTTAGTGC  81 210
        alr1 1231948 .. 1231971 -  -3.1  -3.05384   GGCGCTTCGACGCAA          TCGGAGCCTC GGCCT GTGGCT-CGA          CCGCGGTCTCGGCAC  43 108
        radA 1229803 .. 1229842 -  -2.9  -2.71144   CATCGGCCTCAATCA GGAGCCTCTTCTTC-GCCA AGAA CGGCTGAAGTA-AGGCTCA  GTCTTCATCTTCCGC  41 23
RTCIAT899_CH06010 1229051 .. 1229077 - -10.8  -4.23434   TAAAATAGCTCAAAA         TCCGGCCGGAAA AAA TATCCGGTCGGA         TCTTCTATTGTCACG  90 91
        purF NONE
RTCIAT899_CH06000 1226490 .. 1226503 -  -4.5  -4.72486   CATAAATCCGAAAAA               TACCG TCAC CGGCA                GGCCGGACGTTTGTC  74 204
        cysS 1225068 .. 1225093 -  -2.5  -3.49419   GGGGGGTATAAAAAC         TCACCGCTTGA TCTC CCAAGTCGTGA          TGCGCTCGCTAGTCG  47 0
RTCIAT899_CH05990 NONE
RTCIAT899_CH05985 NONE
RTCIAT899_CH05980 NONE
RTCIAT899_CH05975 NONE
RTCIAT899_CH05970 NONE
RTCIAT899_CH05965 NONE
        rarD 1219190 .. 1219213 -  -8.8  -3.09834   GACCCGATGATGGAA          CTCATCCGCC ATAT GACGGAAGAG           GGCTTCGTCCATACC  60 192
RTCIAT899_CH05950 1216471 .. 1216498 - -16.3   -3.1733   TGCGGTATAAAAGCA        GCGGCCAGGCG TTGATG CACCTGGCCGC         AATCAATGTTCTCAC 100 57
RTCIAT899_CH05945 1214346 .. 1214370 -  -2.9  -3.18264   CCTCGTACCTAGCAA          GCTGTCA TCTCAGTCTCG TGACAGC          AATCGGTGCATAACT  45 95
RTCIAT899_CH05940 1213560 .. 1213579 - -16.4  -4.43477   GGGATGCAATGAAAA            GGCCGCCG ATGG CGGCGGCC             TCCTATGTTTTGCGT 100 55
         psd 1212557 .. 1212600 -  -2.6  -2.80579   GCGTGAAAACAATAG TGTAGAGTATTTCCGTACCT CCGTTT AGGG-CGGAAATACTCT-CG GCTTCAGCTGCGGCG  39 29
         pss 1211582 .. 1211600 -  -5.8  -3.06796   TTGCAGTGCAGCGAA             GCCGCTGC AGG GCTGCTGC             GCAGGGATATGACAA  52 46
RTCIAT899_CH05925 1211033 .. 1211050 -    -4  -3.86346   CGATCCGGTCAGAAA             GCCGCC GAAGAA GGCGGA              TTCGGACGATGGCCA  56 132
RTCIAT899_CH05910 NONE
RTCIAT899_CH05905 1208809 .. 1208826 -  -2.7  -4.07687   AGCCTTTTCTCAAAA             CGACA-CG GCT CGCTGTCA             AAAGAGGTTAATAAA  58 44
RTCIAT899_CH05900 1208470 .. 1208482 -  -6.3   -2.6547   AAAGATACGCATAAG                CAATC TCT GATTG                TTATTGCAGGGTACG  49 26
RTCIAT899_CH05895 1207629 .. 1207650 -  -4.3  -3.04398   TCGTTGTCGCAAAAC           CGCTGCGCA CTTT TGCGCGACA            TGCTTCATCACGCAG  47 83
RTCIAT899_CH05890 NONE
RTCIAT899_CH05885 NONE
RTCIAT899_CH05880 1205465 .. 1205481 -  -7.2  -3.05384   CCGGCGGCCAGGCAA              GCGAGG GTGAG CCCCGC              TATTGACGCGATCGG  57 106
RTCIAT899_CH05865 NONE
RTCIAT899_CH05860 NONE
RTCIAT899_CH05855 1199764 .. 1199798 -  -7.9  -4.08767   CCGACGGGTTCAAAA    CGAACCATAAGCATGC GCCT GC-TGCTTTGGGTTCG     CAAGCCAAACAATCG  74 50
RTCIAT899_CH05850 1196428 .. 1196465 -  -4.1   -3.2964   AAAGTCTCCTGACAA   TTGCCGAC-GACCGTCAT GGC AGGGCGGTCAGTCGAGAA   ACGGCAATACGACGA  47 15
RTCIAT899_CH05845 1195692 .. 1195712 -  -3.9  -3.59979   TGGTCGGAGGTGAAA            GACCGCTCG CTT CAAACAGCC            ATATTCGACGCCGCC  51 16
RTCIAT899_CH05785 1185441 .. 1185493 -   -12  -3.05816   GGATGCCCTAGCGAA GGGCCGGCTG-TCGCGGCA-AACGCG AAA CGCTTTCTGCCGCGTGCAGCGAACCC GTCTAATGCAGTCCC  76 44
RTCIAT899_CH05770 NONE
RTCIAT899_CH05765 1180437 .. 1180457 -   -14  -3.19026   GATCGGAAGAGGGAA            GGCCCGGT TTCCC ACCGGGCC            TTCTTGTTTCATGAG  95 66
RTCIAT899_CH05740 1174950 .. 1174980 -  -9.8  -3.98745   GAATCATGGAAAGAA      CGTACACAAGCGC GAAAAA GCGCTTGCGT-CG       ATAAATGAATGGCCC  80 220
RTCIAT899_CH05720 NONE
RTCIAT899_CH05715 NONE
        iolD 1167303 .. 1167314 -  -2.2    -5.098   GAAAAATAAAAGAAA                TCGA TCAG CCGA                 TGCGCTGGGCGGCAC  74 18
        iolE NONE
        iolB 1165394 .. 1165429 -   -17  -3.61398   TTGCCGGCGTAAGAA    TGGAAAAGGCCGCGCT TTCG AGCACGGCCTTTTCAA     CTATGAATCGATGTC 100 50
RTCIAT899_CH05685 1162350 .. 1162371 -  -9.3  -3.72576   TGGTCGGTGAGGAAA           CGCGCGAGC GCCG GCCGGCGCG            CGAACTCGTGCTGGA  71 469
RTCIAT899_CH05675 1160931 .. 1160944 -  -5.9  -4.09243   GAGACGTTCGCAAAA               GGCCG AACG CAGCC                GCCGGACGCACTCCC  67 121
RTCIAT899_CH05665 1158976 .. 1159005 -  -8.5  -4.39386   CCGAAATGATGAAAA       CCGCGACCGGCC GGAACAA GGCAGG-CGCGG       TTTCGTCGTTTTGGG  83 42
RTCIAT899_CH05655 1157760 .. 1157794 -  -5.7  -3.96216   CTCGCAGGCAAATAA    CGAGA-GCCCGCCG ATGTCAGG CGGCAGGCATGTCG     AGTGCTTTCTGGGAC  65 55
RTCIAT899_CH05650 1157353 .. 1157366 -  -2.4  -3.40403   TGTCGTTGATTACAA               GCAA ACGACG TTGC                AACAGGCGGCCCGGA  45 102
         amn NONE
RTCIAT899_CH05640 1155107 .. 1155118 -  -2.2  -3.90112   TGGTCGCCAAGCAAA                TCGA CATC CCGA                 TCCGCAGCATGACAA  52 360
RTCIAT899_CH05635 1154696 .. 1154706 -  -2.4  -3.55622   CGTAACCTCCTCAAA                 CGTC CGG GCCG                 AAATTATAGATCGGC  47 10
RTCIAT899_CH05630 NONE
RTCIAT899_CH05625 NONE
RTCIAT899_CH05620 1152547 .. 1152562 -  -4.6  -4.28774   GGAGGCAATCGAAAA              TCTCGC ACAG GCGAGC               ATCAATGCCCACCTC  65 131
RTCIAT899_CH05610 NONE
RTCIAT899_CH05605 1149699 .. 1149713 -  -3.4  -3.85698   CTCGCCGCCGATAAA               TCGACG CGT CGCCGT               TTCGAAAAGCCTGAC  56 215
RTCIAT899_CH05595 1146587 .. 1146598 -  -2.2  -3.31144   GCTTTATGCCGACAA                CCTGC GCA GC-GG                CGAGTTGGGCTTCTA  44 332
RTCIAT899_CH05585 1144016 .. 1144035 -  -5.8  -4.02253   GCAAGAATGCACAAA            TTCTGTAC GTAG GTACAAAA             AGGATACTGTCGATG  65 407
RTCIAT899_CH05575 1142880 .. 1142908 - -10.9  -4.18164   AATGCGTTAAAACAA        TGCGGCCGGACGA CAT TCGCCCGGCCTGA        TTTGCCAGGAATTTT  86 47
        mgtE 1141160 .. 1141177 - -12.7  -4.90471   AGTGAAAACATAAAA             GGGGCCA TCGC TGGCCCC              TTTTCGATGAGAATC 100 50
RTCIAT899_CH05560 1139553 .. 1139581 - -13.1   -4.2772   TGGAACGAATAGAAA        GAGCGGCGCAGCA CTT CGCTGAACCGCTC        CATATCTCCGCAAGA 100 47
RTCIAT899_CH05545 1136117 .. 1136129 -  -4.7   -4.7254   ATTCGGCAGGAAAAA                CAGCC TGA GGCAG                CATTTATACTCCGGA  74 136
RTCIAT899_CH05540 NONE
RTCIAT899_CH05535 1131438 .. 1131457 - -12.8  -3.51232   TGGCTGGCAAAGGAA            CGGACGCC TTTT GGCGCCCG             CTGACCTTATTCCGC  85 32
RTCIAT899_CH05530 NONE
RTCIAT899_CH05525 1128964 .. 1128982 - -10.3  -2.80437   AACAGAGGAAGACTA             CCATGCG AAAAA CGCATGG             CTATAGTCATGTTTC  66 58
RTCIAT899_CH05520 NONE
RTCIAT899_CH05515 1128343 .. 1128364 -  -2.9  -3.74526   GTATGAATCCAAGAA           GACCGAGAT GTGG ATCTCGCGC            AATTTTCTCGATCAG  52 128
        pepN 1124435 .. 1124452 -  -7.7  -4.19238   CGTTGAAGCTGAAAA             GGCCGAT GCAA ATCAGCC              TTTGAAATCGGTGCG  74 55
RTCIAT899_CH05500 1121807 .. 1121822 -  -4.6  -4.62069   GTTCGATCCGAAAAA              CACGCC TTCC GGCCTG               ATCGAACTGGTCTGC  73 140
RTCIAT899_CH05430 1105892 .. 1105904 -  -3.3  -4.07568   TGCCCTTCTGGAAAA                GCAAG ACC CTGGC                GGAGATGACTTCGTC  59 451
RTCIAT899_CH05420 1103398 .. 1103431 -  -7.3  -4.23758   AGCGGACATGCAAAA     CACCGGCCGTCG-TCC TTC GGTTCGACGGCGGGTT     TGCCACTGTTATCTG  77 75
RTCIAT899_CH05415 NONE
RTCIAT899_CH05410 1101943 .. 1101992 - -14.4  -3.05503   AAAGGGAAATAATCA CTTCAAGCGAGCAAGTGCGCAGCG CATT CGC-GCGCACTTG-TCGCCTGCGG CCGCAATCAGCTGTT  91 170
RTCIAT899_CH05400 1100706 .. 1100717 -  -5.8  -3.86015   GACTCTTTTGATAAA                GAGG ACAT CCTC                 GGCGATGACTGTCGA  63 349
RTCIAT899_CH05395 1099411 .. 1099445 -  -8.7  -2.83715   TCGATGAGGAGGAGA    GCGGT--ACGCGGCTTT TCG AAATCCGCGTCGACCGC    AGGGAGCCGCAGGAA  59 171
RTCIAT899_CH05375 1095607 .. 1095634 - -10.5  -4.27512   CGGGACAAGAAAGAA        CGCCGCTAACC ATAAAA GGTCCGCGGCG         CAGAAGTTGGGGCCA  90 53
RTCIAT899_CH05370 1095057 .. 1095084 -  -9.9  -3.16971   TCATGACAGACTGAA        GATAATCCGGC TTTCGG GCCGGGTTATC         CGCAATGATTGCTGG  68 50
RTCIAT899_CH05325 1087172 .. 1087183 -  -3.6  -3.28712   GCTGCGTTTCCAGAA                CGCC ATCT GGCA                 TGGCTTCGTCGTTAC  47 79
RTCIAT899_CH05315 1085354 .. 1085377 -  -6.6   -2.7806   TTCAAACGCGGAAAG          GCTCGTTCCG GTTC CGTAACGGGC           ATGAAGCGATAGCGA  52 52
RTCIAT899_CH05310 1084055 .. 1084070 -  -7.6  -3.25719   TGACGACACGACGAA              CTGATC GCCA GATCAG               CCGGAATATTTCCGG  59 88
RTCIAT899_CH05300 NONE
RTCIAT899_CH05295 1081536 .. 1081548 -  -4.7  -3.16564   GCCGGATGCCATGAA                TGCGC CCG GCGCC                GTCTTTCGCAGCAAG  48 245
RTCIAT899_CH05285 NONE
RTCIAT899_CH05280 1078300 .. 1078311 -  -5.8  -2.74523   TCATCGTGAAGAGGA                GAGC TCAT GCTC                 CTAAGGTAGGGCCGG  50 91
RTCIAT899_CH05275 NONE
RTCIAT899_CH05270 1075862 .. 1075876 -  -3.5  -3.56092   GGAGCAGCTGGTAAA               CTGGC TCGTC GCCAA               TACGACGGGAAATAA  49 341
RTCIAT899_CH05250 1072975 .. 1072990 - -11.8  -4.38927   TGCCGATACAACAAA              GCCGCC TGAC GGCGGC               TTGTTGACAATATGA  95 152
RTCIAT899_CH05245 1072421 .. 1072435 -    -7  -3.54424   GGCGATCCTCTTAAA               GGCCGG CAT CAGGCC               AGAGCCTGCAGGTAG  60 19
RTCIAT899_CH05235 1070364 .. 1070376 -  -9.1  -4.08394   AGACGCTGCCGAAAA                GCGAC AAT GTCGC                TCCGCCGCACGAGCT  76 474
RTCIAT899_CH05215 1067568 .. 1067586 -  -6.7  -3.56821   AGGACAGGCTGGAAA            TCAGCGGC TTTG GCCGC-GA             GACGAGCCGAACCCT  60 137
RTCIAT899_CH05200 1064704 .. 1064724 -  -8.3  -3.16564   GCCTTACGTTATTAA            CTGATTGCA TTT TGCAATCGG            TTGCGGTGGGCGGCA  62 423
RTCIAT899_CH05190 1063768 .. 1063789 -  -4.3  -3.09772   GCAAACGCTCAAAAT           GCGCCCGAA AACG CTCACGCGC            TGCGAAGTCGATCGG  47 18
RTCIAT899_CH05185 NONE
RTCIAT899_CH05180 1061325 .. 1061370 -  -8.1  -3.07816   GTTTGAGGCACTCAA CCCGGCTCTGCCGC-TGCGAGA AAA TCTCGCGTGCGTCTATGCCGAG GCTCTGAAAATATAC  56 413
RTCIAT899_CH05170 1060283 .. 1060304 -   -13   -3.2699   AGGACACGCAGAAGA           GTGCGGCC GTTTAT GGCCGCAC            GGGTGTTCCTACACG  83 14
RTCIAT899_CH05160 1058021 .. 1058036 -  -4.6  -3.49777   CGGGATATATCAGAA              CCGCGT AATG ACGCTG               ATCCCCTTGCCCTCG  52 4
RTCIAT899_CH05155 NONE
RTCIAT899_CH05150 1055380 .. 1055401 - -14.4  -4.64861   TGCCTTGAAAAGAAA           GCCGCCGG CCAAAT CCGGCGGC            TTTTTGTTGTTCAGA 100 118
RTCIAT899_CH05140 1052983 .. 1053010 - -13.5  -3.40597   GGCTTGAGGGAAATA        GC-ACCTCCCCC TTGAG GGGGGAGGTCGC        CGTAAAGCGGCGGGT  88 132
        ohrR 1050354 .. 1050386 -  -3.3  -3.06815   ATGCCGCCGAATATA      CCGCCTTTGCTGC TGCGATT ACGACGAAGGCGG      CGATCGATCTGACCG  43 356
RTCIAT899_CH05095 1045489 .. 1045509 - -12.6  -2.71364   GCACTCTCCGAACGA            TCTCCCCC CTTGT GGGGGAGA            TGTCGCGAAAGCGAC  76 98
RTCIAT899_CH05090 1043138 .. 1043176 - -13.9  -3.21593   CAGTTCCCTATAAGA  GCGGCGCG-GGAGATAGCC GGA GGCC-TCTCCGCGCGTCGC  TTTTCAAGCCATCAG  87 29
RTCIAT899_CH05070 1037703 .. 1037719 -  -4.3  -4.56597   GCCTTCTTCGAAAAA              CGGCAGC CGA ACTGGCG              AACGGGTTAAAGCGC  71 85
RTCIAT899_CH05030 1026003 .. 1026026 -  -6.6  -3.54424   GCCGATCTCTTGAAA          GTCCCCGCCG TCAT CGACGGACAC           GCGATGTTCGGCTGG  58 350
RTCIAT899_CH05020 NONE
RTCIAT899_CH05015 1024576 .. 1024588 -  -9.1  -3.12895   TGGGCGAGCAATATA                CCGTC GCA GACGG                CTATCTCTTCACCAT  61 166
RTCIAT899_CH05000 1022686 .. 1022733 -  -7.1  -3.40403   CGGCGGCGACGACAA GGCATACCGATC-TCC-GGCC GTCGGTCA GGCCAGGAAGATCGGCACGTC CATATCTCGATAGGG  58 2
RTCIAT899_CH04995 1022074 .. 1022089 -  -4.7  -3.62597   GCGATCTTTCAAGAA              CTGGA ACGGCA TCCAG               GTCGGTGATATCAGG  54 77
RTCIAT899_CH04980 1018722 .. 1018734 -  -4.8   -4.2558   CACGGCTGAGGAAAA                GCGA GCCAT TCGC                GACGACCTTCTCGCC  65 159
        betI NONE
        betB 1012399 .. 1012410 -  -5.8  -3.28001   CAGGCGTAAATCGAA                GGGT CTAC ACCC                 TCCCCTTGAGGGGGA  54 146
        betA 1010260 .. 1010292 -  -6.3  -3.12327   TGCGCAGATTGAACA     CCGCCGAACGAGGA CCGAAT TCATCGCTCG-CGG      CCTTGCTGCGCGGGA  49 446
RTCIAT899_CH04930 1008289 .. 1008301 -  -5.5  -4.06055   AGCCGGCAAACGAAA                TCACC TTC GGCGA                AATCCTGCGGGTCAT  65 300
RTCIAT899_CH04920 1006789 .. 1006815 -  -3.5  -2.87132   TTGGTTCCCTAGATA         TCGGCGGCGCG GGAGA CGCGCTTCGGA         TCGATGCCGGGAGCC  44 51
RTCIAT899_CH04915 NONE
RTCIAT899_CH04910 1004221 .. 1004244 -   -16  -5.04601   CTTACAAATGAAAAA          GGCGGCGGAGC CGA GC-CCGCCGCC          TTCTGTCATCACATA 100 50
RTCIAT899_CH04885  999300 ..  999321 -  -4.5  -4.84359   TGATGTTCATAAAAA           CTCCAATCCA ATA TAGATTGG-G           CATAGGCTATCGCGC  77 420
RTCIAT899_CH04880  997832 ..  997852 - -10.4  -5.24129   CGTGGCGACAAAAAA            GCCGCCAG GTAGA CTAGCGGC            TGGTTCGGGTCTTTT 100 406
RTCIAT899_CH04875  996296 ..  996323 - -11.2  -3.78775   GGCCTCATGATGAAA        GGATCGGCCGGT ACTG ACCGGCTGAACC         TCTATCTCGGCACAT  80 435
RTCIAT899_CH04840  992601 ..  992624 - -11.6  -5.27938   ACTTGCAAACAAAAA          CGGGCCGCCC TCGC AGGCCGCCCG           TTGATATTGTCTCGG 100 57
RTCIAT899_CH04835  992020 ..  992036 -  -5.1  -2.53911   CCAAGCGGTAAGGCA              CCGGT TTTTGGT ACCGG              CATTCCCAGGTTCGA  46 84
RTCIAT899_CH04825 NONE
RTCIAT899_CH04820  990615 ..  990641 -  -7.2  -3.32294   TGAAATCGCGGATAA         TCACCCGTCTCA GCT CAAGCCGGGCGA         TAGGCCCCGAAAAGC  61 13
RTCIAT899_CH04810  988763 ..  988788 -  -2.4  -2.89475   CAGGCACAGACTATA         GCGTCGCGCG TGGTGG CGCGAAAGGC          GTATTACCACCGCAG  40 50
RTCIAT899_CH04805  988267 ..  988286 -  -5.6  -3.32647   GCGCAACGACATGAA            GCTCGGCA TCTG CGGCGAGC             ATGGCGGCGACCCCG  52 179
RTCIAT899_CH04770 NONE
RTCIAT899_CH04765 NONE
RTCIAT899_CH04760  976223 ..  976277 - -14.4  -3.39288   CAGTTGGGAAGAAGA CGAAACACCCAGGGCCTTATCGGATA TAT TGTACGGTAAGGCCCTGGATTTTTCA GCTTCGGATCTCAGA  95 36
RTCIAT899_CH04740  973238 ..  973259 -  -2.8  -4.07687   AGCTTGCTTGCAAAA           CTCCGTCG CAATTT CGCCGGCG            GTGAAATCCGTCACG  57 120
RTCIAT899_CH04720  970497 ..  970513 -  -6.5  -4.36914   TGTTGCCTCACAAAA              CGCCG TCCCATT CGGCG              AGCGCCATGACGACG  74 1
        thrC NONE
RTCIAT899_CH04705 NONE
RTCIAT899_CH04700 NONE
RTCIAT899_CH04695  962957 ..  962978 -  -5.1  -3.56643   CTTACAGGGCGGAAA           GCGCCGAGCA GCT CG-TCAGCGC           CTGGATCCCTTTGAG  54 166
RTCIAT899_CH04675  960051 ..  960063 -  -7.7  -2.75064   CGGTTCAGGGAACTA                TAGGC CGG GCCTA                TTCAAGTGCAAGGGT  55 23
RTCIAT899_CH04670  959321 ..  959353 - -17.8  -3.71917   AGGCTAAAGCTTAAA      GGGCTGAGCCCTGT TCAAT ACAGGACCCAGCCC      TTAAATCAGCCAAGC 100 165
RTCIAT899_CH04650 NONE
RTCIAT899_CH04645 NONE
RTCIAT899_CH04640  954353 ..  954376 -  -3.8  -3.12351   TTTTCTTAGACTCAA          GTC-CGCCCTG ACA CAGGACGAGAA          GGCGGCGCTCTTCGA  43 328
RTCIAT899_CH04625 NONE
RTCIAT899_CH04620 NONE
RTCIAT899_CH04615  950496 ..  950511 -  -4.6  -3.86897   CCTAGTCGCCAGAAA              CACGGC ATTG GCGGTG               CGCTTGTTCGCGAAG  59 294
RTCIAT899_CH04580  945354 ..  945370 - -10.9  -2.78813   CTCGAGCGGAATAAG              GTGACAG AGA CTGTCAC              TAAAATCCCCTAAAC  66 221
RTCIAT899_CH04575 NONE
RTCIAT899_CH04570  944108 ..  944128 -  -2.3  -4.19735   CTTTCGAAAACCAAA            GGCGGGCGC TCG GCGTTAGCC            TCTAATTGAAATGTG  56 150
RTCIAT899_CH04535  937794 ..  937815 -  -7.2  -3.36452   ACCGCGCAAGAGCAA           GCCCATCC GGTCAG GGAAGGGC            GTCGTAGCCGTCCGC  61 14
RTCIAT899_CH04530  935915 ..  935948 - -18.1  -3.92522   CTTGAATTGGATAAA     CGCGAGCCGGCGGAG CGAT CTCCGCCGGCTCGAC      TTTTTGGCGGGAATC 100 402
RTCIAT899_CH04515  933106 ..  933159 -  -8.8  -4.07568   CTTCGCGCTGGAAAA GGCCGTCGCCGAATAT-ACCGCCCG TTACG CGATCGGCGATATTCCGCGCCCGCC TTACTGGTCCGGATT  76 165
RTCIAT899_CH04505  932138 ..  932166 -  -5.2  -3.65902   TGGAGGCGATGGAAA        CAGGAGAAAGGC GATCA GCCTGCCTGCTG        GAAGCTCAGCAACTG  58 11
RTCIAT899_CH04500  930673 ..  930684 -    -3  -4.25104   CTGTTGTCACCAAAA                TTTC ACAG GAAA                 AGCCCTTCGCGCATA  62 16
RTCIAT899_CH04495 NONE
RTCIAT899_CH04490  929074 ..  929095 -  -5.1  -3.12895   CTGCGTAGGAATACA           TGAACTACC TCCT GGTGGTCCA            AGTTTTCGTCCGCAT  50 51
RTCIAT899_CH04485  927356 ..  927379 -  -5.2  -3.12351   GTCTTCTATACGGAA          GTCGACGGCA AGCG CGTCGTCAAC           GATCTGGATATCGTC  50 182
        aroC NONE
RTCIAT899_CH04470  924618 ..  924629 -  -4.4   -3.5764   AAGGGGAGGGTTAAA                GATC AGCA GATC                 TCCGTCTTGGCGATC  52 16
        bioM NONE
        bioN NONE
       bioY1  919412 ..  919430 -  -4.5  -3.63991   GATCAGCGTCAACAA             GATCGGC GGCAA GTCGATC             GGTTTCGTCGTGGCG  54 175
RTCIAT899_CH04430 NONE
        xseB  917754 ..  917770 -  -2.2  -2.57013   TCGGAACGCAACCTA              CCGG GCCAACCTA CCGG              CAATGTCACCCAAAC  38 61
RTCIAT899_CH04420  916732 ..  916750 -  -2.3  -2.64337   TACGTCAAAACAGAT             TGCGGCA AAAGG CGCCGAA             TTCAAGGTACTCCCG  38 73
         dxs  914692 ..  914732 -  -8.3  -3.59874   GTAAAAACAAAGAGA  TAGAGCATTTTCGCGATTC GAA GAAAAGCGAAACGGCTCTA  GGCGCGCTGCCTGAT  65 49
RTCIAT899_CH04405  913043 ..  913053 -  -6.8  -2.76263   TGCAGCACTCAACGA                 GCTG CTC CAGC                 AGTTCCGTCTCGGCA  50 263
       rrmJ1 NONE
RTCIAT899_CH04385  907788 ..  907799 -  -2.2  -4.25104   TCTCTGGCAGCAAAA                CTCG CCGC CAAG                 CCGCCTGAGGCCCTT  60 180
RTCIAT899_CH04370  903838 ..  903870 -  -9.1  -3.57144   CGCCGTATTTCTAAA      GCGGTTCAGTTTTTC ACG GAATCTCTGAACCGC      TCCAGCTCTTTTCAC  68 160
RTCIAT899_CH04360  901906 ..  901916 -  -6.8  -2.64794   GCGAAGTCGAGATGA                 GCCA CAA TGGC                 GGCATCCTCGATGAC  49 219
RTCIAT899_CH04345  898394 ..  898409 -  -3.2  -3.14344   GAGTTTTTGGATCAA              TCGTCA AAGC TGGCGA               ATGATGTCGCGAAGC  43 13
RTCIAT899_CH04340 NONE
RTCIAT899_CH04335 NONE
RTCIAT899_CH04330  894882 ..  894916 -  -6.2   -4.1899   CGAGCGCATGGAAAA     GGACGGCCTGGTCGGC CCC GCCAACCATGTCGGCA     AACGCGAGATCATCA  68 391
RTCIAT899_CH04315  888337 ..  888375 - -20.4  -3.78775   TCCCTGAGGACGAAA   CGACATCGGCCGCGAG GTTGTTT CCCGCGGCCGATGTCA   AGGGTCTTAGTTTCA 100 53
RTCIAT899_CH04300  885624 ..  885636 -  -9.1  -2.92513   ATAATCGCAATTACA                TCGCG GAG CGCGA                GGCGAAACTGAAGGA  59 168
        purD  880363 ..  880382 -  -3.5  -3.86312   ACGCATAACCAAGAA            CTCCGCC TATAGT GACGAAG             ACATTAGTGCGGCTT  56 109
RTCIAT899_CH04280 NONE
RTCIAT899_CH04275  877697 ..  877720 -  -5.8  -5.31519   ATAGCCAAATAAAAA          GCCGTCGGAC GCAT GCCCGGCGGT           TTTGTGTTTTCTGCC  95 50
RTCIAT899_CH04240  868889 ..  868930 - -14.3  -4.56597   CGGCTCGCCGAAAAA TCCCGCCGCGCCGAAACGG AACG CCGTACCGGCGCCATGGGA  ACGCTGGTCAAGGAC 100 523
RTCIAT899_CH04210  865621 ..  865647 -  -2.9   -3.3785   TCAACTGATTCACAA         CAGGATGGCTT TTTTG AAGCGGCCCTG         CAACAAATTCAGGCA  47 48
RTCIAT899_CH04205 NONE
        ispE NONE
        moaB  861865 ..  861884 -  -6.4  -2.90615   ATTTCGGCGAAAGGA            GGTGCGTT ATGA AACGCACG             ATGCTCTACCGCCTC  51 354
RTCIAT899_CH04180  859549 ..  859596 -  -7.7  -3.36131   AAAAGCATTGGAGAA TCGGGTGATGTGCTGCGTGTCA TGCGG CGAAGCTC-GCACACCACCCGA TCTCCTGCAAGCCCC  61 107
        rnhB  858433 ..  858456 -    -3  -4.56597   CCCTGTTCGCAAAAA          GCCTCGCG GCCAGCCA CGCATGGC           AACTGCCGGCCCGCT  66 481
RTCIAT899_CH04105  844985 ..  844997 -  -6.9  -2.53918   CGAGGTTAGAAAATG                CCGCC ATC GACGG                TGATGGCTTGTCCGG  51 3
RTCIAT899_CH04100 NONE
RTCIAT899_CH04095 NONE
RTCIAT899_CH04090  842441 ..  842473 - -23.6  -4.17762   GACCCGTCAAAATAA      GACCGCCTTCAGCC TGATC GGCTGAAGGCGGTC      TTCAATCAAAGCTTG 100 31
RTCIAT899_CH04085  841449 ..  841472 - -13.8  -4.48743   AAAAGGTCAAAGAAA          GCGGCGATCC GTAA GGGTCGCCGC           TTTTGTATTTCGCCA 100 55
RTCIAT899_CH04070  836011 ..  836025 -  -2.1  -4.08216   CTATTTTCCGGAAAA               GTTCC TTTTG GAAAC               GGCTGAGGTCAGCTG  56 34
RTCIAT899_CH04065  835157 ..  835174 -  -6.9  -3.53012   TCTGGCCTGCTGAAA             GTCGGTG AAGG CACCGCC              GCCGATCGCGTTGTG  58 511
RTCIAT899_CH04030  827349 ..  827372 -  -9.5  -2.61264   GTCGTCATCGAGAAG          GGCGAGCTC TTTCCC GTGCTCGCC           GCCTCTGCCGCCATT  56 443
RTCIAT899_CH04010  823703 ..  823713 -  -4.6  -4.63218   GCCGTTCCAATAAAA                 GCCC TCA AGGC                 GGCGGCATCAAAACC  71 49
RTCIAT899_CH03965  813522 ..  813544 -  -2.6  -2.92668   GACGAGTCAAGGACA           GCACTGTGAA TTT TTTACGGCGC           GCCTCGGCTTGTTTT  40 17
       groES  813091 ..  813106 -  -4.6  -3.37537   TATCGGAAAAGGGAA              CCGGCC AATT AGCCGA               TGATGCCCATGATGT  51 18
       groEL  811209 ..  811228 - -12.8  -5.38054   GGCCACAAACAAAAA            GGGCGACC CGAG GGCCGCCC             TTTCGTCAATTCCGG 100 182
RTCIAT899_CH03950 NONE
RTCIAT899_CH03940  808886 ..  808909 - -15.2  -3.98083   CATTTAACGTAGAAA          GGCTCGCCGG AATT CCGGCGGGCC           TTTTGTCTTGGGAGA 100 51
RTCIAT899_CH03920 NONE
RTCIAT899_CH03915 NONE
RTCIAT899_CH03910  803747 ..  803772 - -15.5  -3.03771   TGAGAGCGTGGAACA         GAGAGACGGCA CGAA TGCCGCCTCTC          ATTTGCCGGATGGAT  93 40
RTCIAT899_CH03900  801662 ..  801692 - -21.1  -3.70149   CTGATATCATGCAAA       GCCGGGCCGCAGC TTTTC GCGGCGGCCCGGC       TTCACGTTAAAGATC 100 32
RTCIAT899_CH03890  799379 ..  799405 -  -9.4  -3.18264   TTCGGCACGGATGAA         GACGGCAACACC GCC GACGTCACCGTC         AATGAGGATACGACC  61 212
RTCIAT899_CH03875  797254 ..  797271 -  -7.1  -2.78816   CTATCGCGGATCAGA             CTATAGT CTGA ACTATAG              TGGCGGGCGGTCCGG  52 104
RTCIAT899_CH03870  796349 ..  796401 - -20.7  -2.54371   AACTATTGCAAGCGA TACGGGCGC-CTTCCCCGGCGTGA ATGATG TCACGCGAGGGAAGAGCGCCCGTT ATGCTGGTGCCTGAT 100 56
        lpxQ  795401 ..  795432 -  -4.3    -3.484   TGGATTATAGCACAA      GACCCCCCATGCC TGAACC GGTTTGAGGGATC       GATTGCGACTTCAGC  52 51
RTCIAT899_CH03860  794956 ..  794970 -  -4.2  -3.75461   GAAATGCCTATGAAA               CTGAAG GGC CTGCAG               CCGGCCGCCGCTTAG  55 89
RTCIAT899_CH03840 NONE
RTCIAT899_CH03835  788733 ..  788746 -  -3.1  -3.14132   TCTGCCCTTGATCAA               GGA-CG GCG CGATCC               TGATGAATGGCGGCC  45 370
RTCIAT899_CH03820  786085 ..  786105 -  -5.4   -3.0263   ATGAGGCGCGCAATA            TCTGCCAG GGACA CTGGCACA            GTTTTTTGTGACGAA  50 47
RTCIAT899_CH03815  784458 ..  784497 - -12.2  -3.04443   CTTAGAACAATGAGA  TAGAGCGGTTCGAAGACCC GGT GGGAAC-CGAACCGCTCTA  AATGAAGAGCGCGAC  76 23
RTCIAT899_CH03810  783351 ..  783384 -  -7.3  -3.01791   ACCTCGCCTTCAAGA     TCGCCACGGCGCCGCC GCT GTCT-CGCCGCGACGA     TCACGTTGCGGCGCC  52 328
RTCIAT899_CH03800 NONE
RTCIAT899_CH03795  780267 ..  780306 -  -2.1  -3.29511   CTTAGTGTGTGATAA  TCGGGTGCAAT-CCGCAC GGCCT GTGCGGAATTGCGAACAA  TAAAACGGAATACGA  43 52
RTCIAT899_CH03790  779280 ..  779312 - -13.5  -2.89668   CAATATCGGCATAGA      GAGACGGCTCGAA TTGCCTG CCCGAGCCGTCTC      GGATCGATGAGGAGG  81 45
RTCIAT899_CH03770  775153 ..  775163 -  -6.8  -3.53012   TCCTGCCGGCTGAAA                 GTCG CAT CGAC                 CTTGAGGCACGCACG  58 209
RTCIAT899_CH03735  767829 ..  767867 - -11.7  -3.82097   GCTAAACTGACGAAA   CCCTCATTGCGCTGCCG TTTGG CTGAAGCGTAATGAGGG   CTGGACCATCACTTT  86 34
RTCIAT899_CH03705 NONE
RTCIAT899_CH03700 NONE
RTCIAT899_CH03695  759808 ..  759840 -  -9.3  -2.66695   TCGGCCAGGAAATAT     CGGCAA-GCCTT-GC GAAAG GCGAAGGCGTTGCCG     TGACCTGCTCGGCGC  56 361
RTCIAT899_CH03645  749429 ..  749477 - -10.1  -3.21099   TTTGTCCAGCAGCAA GGCATGAGGGTGGCGACCGCG CCTCTAT CGCAAACGCTGCCCGCATGCC CAAATTAACTTGGAA  68 344
RTCIAT899_CH03635  748904 ..  748936 - -11.3  -2.52933   TCCCAAGGCACGAAT     GTCCCGTTCCCAGG TGAAAG CCTGGGG-CGGGAC      TTTTCATTTGCAGCA  68 308
RTCIAT899_CH03620  744245 ..  744259 -  -5.7  -3.23216   GCCTATGATTACGAA               GGAGA GCGGG TCTCC               GTCACGGGCCAGACT  50 305
RTCIAT899_CH03600  740191 ..  740206 - -11.8  -4.56597   GCCCTGGGCGAAAAA              GCCCGG AAAG CCGGGC               TTCGCCAAGAACGAC  95 194
RTCIAT899_CH03585  733924 ..  733943 -    -5  -3.73775   TCCATCGTGACGAAA            CGTCGC-GA GGT TCAGCGACA            AAGGGATGAGCATGC  57 84
RTCIAT899_CH03535 NONE
RTCIAT899_CH03530 NONE
         zwf NONE
         pgl  718154 ..  718191 -  -6.9  -3.36823   GGGTCTAAAAGTCAA   TGCTTTGCCGCTGCGCCC GAG GGGCACAT-GGCGCAGCA   CAGGTTGCTGTGTCT  58 74
         edd  716004 ..  716015 -  -7.2  -3.09492   TGGTCAAGGGCAAGA                CGCC GTTC GGCG                 CGGCGCCCTCCTTCC  52 258
RTCIAT899_CH03505  714156 ..  714182 -    -5  -4.28375   CGAATACACTGAAAA         GGGCGTGATGAA TCT TGCATCGCGCCG         CTGCGATATTATCCG  65 328
RTCIAT899_CH03470  705792 ..  705810 -  -6.7  -2.77899   TTCGCGCACGAAGGA             TCTCGCC TCCGT GGCAAGA             GGCGCCGATATTCTG  50 313
RTCIAT899_CH03350 NONE
RTCIAT899_CH03345  679965 ..  679981 - -12.3  -2.54723   CGTTAATAGGAAGAG              CCAACGC AGC GCGTTGG              TTGATGGCAAGAGAT  71 111
RTCIAT899_CH03330  675563 ..  675592 - -18.7  -3.15768   ATGAAAAGCGCAAGA       CGATCATCGGAGC CACA GCCCCGATGATCG        CTGAAGCTTATTCGG 100 33
        motA NONE
        fliM  664358 ..  664368 -  -5.4  -3.60627   CTATTCCAGTTGAAA                 CTTG CCT CAAG                 CTGCCGTGAGTGGGC  55 56
        fliN  663740 ..  663752 -  -3.3  -3.63968   GCTGAAATCGTCAAA                GTCCA TCA TGGTC                TTCGTCTCCGTCCCG  51 72
        fliG  662640 ..  662660 - -14.7  -3.50832   TGCGAAACGGAAAGA            GGCCGCGCA TGA TACGCGGCC            CTCAGATCATCAGTT  95 70
        flhB NONE
RTCIAT899_CH03235  661013 ..  661061 -  -5.3   -3.6715   CCAGGCAATCGCAAA GGCGATCCGCTTCGG-CTACAT AAGCTG ACGCTGACCGAAACGGATCATC TTCGCAAGTCGTGCA  58 53
RTCIAT899_CH03165  648079 ..  648115 -  -5.8  -3.61356   ACTATTGAGGCCAAA   GCTAGCTCCTGCCGTCC GTAA GAACAGCA-GCGCTCGC    CGTCTTGGCCACGAG  57 88
RTCIAT899_CH03160  646424 ..  646436 -  -9.1  -2.56271   CGGTCATGATAACAG                GACGC CTA GCGTC                TTCCTAGTGTGGGCC  59 89
RTCIAT899_CH03155  645869 ..  645890 -  -6.5  -3.64716   TTATCCTTGAAAATA           GGCCTATGCC GAC GGCTT-GGCC           GCAGGCGGACTTGAT  62 77
RTCIAT899_CH03150  643087 ..  643125 -  -5.9  -4.66163   ACGCCGAGGGAAAAA  TGGCCGGCCATA-TCCGC ACGG ACGGCGCAAGGCCAGCCA   ATATCGCCTTTACCG  76 193
RTCIAT899_CH03140  639804 ..  639823 -  -9.2  -3.14132   CGCCTGTCGCAGGAA            GCGGCGCT CTCC AGCGGCGC             GTCGACGCCTCTGGG  61 226
RTCIAT899_CH03095  630365 ..  630381 -  -3.7  -3.82202   GACGCCGAAATACAA              CGATC TGGAAAT GATCG              TGCGCTCGTCGCTGG  54 138
RTCIAT899_CH03070  624631 ..  624645 -  -2.8  -4.42386   CTTTCATGCAGAAAA               TGCAAG GTG CTTGGA               CAATAGTCGACGAAC  63 492
RTCIAT899_CH03045  614104 ..  614125 - -15.9  -3.54488   GCGTCCTAAACAAGA           TGCCGGCGT GCTG ACGCCGGCA            TGTCGTTTGATCGCT 100 59
RTCIAT899_CH03040 NONE
RTCIAT899_CH03035  612135 ..  612155 -  -2.4  -4.09739   TCAATCGGCGGAAAA            CCGGCTGA TCAGT TCTTCCGG            AAGATGAAACTTGCG  56 13
RTCIAT899_CH03025  610780 ..  610818 -  -9.5  -4.56597   CGGCGTCGCGAAAAA  TCGGTGCGCCGCCCG-TGC TTT GCAACGGATGGCGC-CCGC  CTGCTGATGCCGGCC  84 172
RTCIAT899_CH03010 NONE
RTCIAT899_CH03005  606098 ..  606117 - -16.4  -3.12773   GAAGCCAATAAATGA            CGCGGGGC CTTC GCCCCGCG             TTTTTCGTTTTGGAA 100 311
RTCIAT899_CH02995  603983 ..  603994 -  -2.2  -3.35597   TCTATCGCTGAAACA                GCTCG GCC CG-GC                CTTCACCATCAAGAC  44 408
RTCIAT899_CH02980 NONE
RTCIAT899_CH02975 NONE
RTCIAT899_CH02970  600277 ..  600320 -    -8  -3.14931   TGCATGGTCTACGAA GGCCCCGGCCTGCCGGC-ACA GAT CGTTGCCGGCATGTCGAAGCT GCTCGATCGCGAGCG  57 80
RTCIAT899_CH02955  598381 ..  598393 -  -3.4   -3.1978   ACCGGCATAGGAATA                GGAT CCTTT ATCC                CCGTGCTTTCGCCCC  45 56
RTCIAT899_CH02950  597595 ..  597607 -  -2.7  -3.46068   CTTGCAAGCCAAATA                TTACG ACG CATAA                CGAGAAAACTTTCCT  47 39
RTCIAT899_CH02945  596337 ..  596383 -  -2.9  -4.27617   CACAGCCGATTAAAA GTGCTGCAGCGCCTGCGCGTCA TAAA TGACGCACAG-CACTGTAGTGG CGGAAGCAAGGCGTC  62 39
RTCIAT899_CH02940  595768 ..  595778 -  -8.2  -3.76759   AGCAATTTCAGGAAA                 CCGC GCA GCGG                 TTTTCCGTCCGGAAT  68 51
RTCIAT899_CH02920  591627 ..  591643 -    -8  -2.70932   CCTCGGCTCGAACTA              TCAGGC ACAGG GCCTGA              AGCTCTCGAAGCACT  53 190
        metZ  589154 ..  589186 - -19.2  -3.27704   ATTGTCTAAAGGCAA      TCGAGCCGTCCGGA GAAAA TCCGGGCGGCTCGA      CCGATATCAGGCGGA 100 32
RTCIAT899_CH02895  586972 ..  587000 - -12.4  -3.41051   CGATCGTGATGAGAA       CGGCAAGCC-GCG TCAC CGCTGGCGTGCCG        GTGGCCTGATCGCGC  76 436
RTCIAT899_CH02875  583061 ..  583077 - -10.8  -4.78848   GGCGGAAACAGAAAA              CGGGCC TCAAG GGCCCG              TTTCTTTATCTCAGT 100 52
RTCIAT899_CH02835  574097 ..  574153 - -12.5  -4.59853   GGAACTGCGTAAAAA CAAGAAGATAGAGCGTTTCCACTTTTC TTT GAATCGCGAAAACGCTCTATGCTCTTA TTTCCCAACGCATTC 100 101
RTCIAT899_CH02825  571435 ..  571462 -  -2.6  -5.02074   CCATTTGGCAAAAAA        GCGAGGGGACTT GTGA AAATAGCCCCGC         TTTTCAGTGCCGGTC  74 39
RTCIAT899_CH02815  570546 ..  570575 -  -4.7  -4.14392   CGTCAATTGCGAAAA       GCGCTTCTGGCCG ATTG CGGCCGCCGGCGC        CTGTTTTAAAACGGC  62 41
RTCIAT899_CH02810  569415 ..  569428 -  -4.5  -3.11272   CATTACCACGGAACA               CGTCC GTCC GAACG                CCAAACTTCAATTTT  47 75
RTCIAT899_CH02805  568970 ..  568987 - -14.1  -3.32844   TGTCCGATGGCAGAA             CGGCGCC TTTC GGCGCCG              TGTCGGGATAAGTTT  95 64
RTCIAT899_CH02780  565224 ..  565260 - -18.1  -3.75629   CATGCCCAATTGAAA    CCCCGCGGCTCCACTTT ATC AAAATGGAGCCGCCGGA    GCGGATGATTTTAGG 100 152
RTCIAT899_CH02775 NONE
RTCIAT899_CH02770 NONE
RTCIAT899_CH02765  562162 ..  562192 -  -6.8  -3.12606   CGATAGAGGAGGCAA       TCGAGGCAGCGC GCGAATT GCGCCGCGTCAA       TCCGACCGCCGTTTA  52 124
RTCIAT899_CH02755  561207 ..  561227 -  -5.4  -3.85864   TCACGACCATAAGAA            TCATGGCC ACAAG AGCCACGA            TTATTTTGGCGTGCC  62 114
RTCIAT899_CH02745  558773 ..  558797 - -17.2  -5.46698   CCCAAAACGAAAAAA          GCCGCTCGTG AAAAG CACGAGCGGC          TTCCTGAATGACACG 100 49
         pgi  556914 ..  556933 - -13.6  -3.21912   GTGCCAAGCCACCAA            TCTCCCCC ATGT GGGGGAGA             TGTCACGACAGTGAC  87 114
RTCIAT899_CH02720  553421 ..  553447 -   -13  -2.91063   GAGGCAAAGCGAAAC         GGCCGCAACC GTGTAGA GGTCGCGGCC         TATCTGCGGGCTGTC  79 82
RTCIAT899_CH02685 NONE
RTCIAT899_CH02680  544968 ..  544987 -  -9.2  -3.12668   CAGGCGGAGACCGAA            GTGGCCGG CAAG CCGGCCAT             CATACCGACGATCAC  61 375
RTCIAT899_CH02650  538413 ..  538453 -  -8.2  -3.41222   CCGTAATGTGAAACA  GATCGGAATCCCTCTCCG TTCCG CGGAGGGGGATTTCTTTC  AGACCGCTGCGGGAA  64 50
RTCIAT899_CH02640 NONE
RTCIAT899_CH02635  535777 ..  535792 -  -3.2  -3.05268   TAAGCAGTCTGAACA              CGGG GCTATTTT CCCG               ACGATTCCGTTTCAT  43 37
        rnpA NONE
RTCIAT899_CH02595  525679 ..  525696 - -14.1  -4.62203   GCCAAATAACGAAAA             GCCCCGC CGAA GCGGGGC              TTTTGTCGTCATTTC 100 34
RTCIAT899_CH02570  522315 ..  522325 -    -4  -2.83403   TTTTGCCCACGAAAG                 TCAA GTT TTGA                 TCGGCAAACTGGCTT  43 85
        ysxC  521269 ..  521290 -  -6.5  -3.63276   CGAGAACAAGGAGAA           GCTGGTCAA GATC CTGACCTGC            CATGTCGTGGCTGGT  60 334
        argB  518084 ..  518098 -  -7.8  -3.65902   TTCATCCTATCGAAA               TGCAGG CGG CCCGCA               TCCGCGCCATCCGTG  64 467
RTCIAT899_CH02535  516678 ..  516688 -  -3.2    -3.922   AAACGGCCAATTAAA                 CCTC TGT AAGG                 CGCATGAAACTTTCG  56 117
RTCIAT899_CH02530  515861 ..  515900 - -22.2  -4.18762   AACGGTCACTGAAAA  CCGAAAGCCCGCCATCGC TTGG GCGAGGGCGGGCTTTCGT   TTGTGGACTATTGCC 100 53
        dapD  513874 ..  513893 -  -7.1  -3.11687   GCAAGCATGAGGGAA            GCGCGAT ATGGCA ACCGCGC             TTCCGAAATTTTGCG  54 44
        dapE NONE
RTCIAT899_CH02510  511930 ..  511943 -  -3.7  -4.07568   CCTCGCGGGGGAAAA               TGCCG ACGA CGGCG                AGGATCTGTCGTAAT  60 55
RTCIAT899_CH02480 NONE
RTCIAT899_CH02475  506439 ..  506472 -  -6.1  -2.98786   CAGAGGAGAATGATA     TGGAAGCGCAA-AAAT TTA ATTAATTGCGCTTCCC     GATGCGTGGGGAATT  51 47
RTCIAT899_CH02470  503900 ..  503923 - -19.6  -4.77157   TTAACTTATCAAAAA          GGCCGCCGGA GCGA TCCGGCGGCC           TTTTGTACCTTTTAC 100 56
RTCIAT899_CH02460  502146 ..  502166 -  -4.6  -3.19642   AGTATGAGGGACCAA            CGGCTCCA GAGCA TGATGCCG            AAAAGTGTGGATGGC  49 136
RTCIAT899_CH02455  501819 ..  501830 -  -5.8  -2.87132   CGGCTGCTCGATAGA                GTCC TTGC GGAC                 GGTGATTTCACCGTC  51 56
RTCIAT899_CH02350  477306 ..  477316 -  -5.4  -2.61681   GCTCAATTTCATAAG                 GTAG CGT CTAC                 GACCCCGCACCATAG  46 22
RTCIAT899_CH02345  475406 ..  475449 -    -3  -3.66018   GGATTACCGCAACAA GCGCAC-GGTCGAGCTGCTCT GGC AGGGCAATTGGGCCTATGCGC TGAAGCACGGCATGG  49 402
RTCIAT899_CH02315  469287 ..  469305 -  -3.7  -2.60615   ATGGGCGCCAAATAT             GCGCTCG GCAAT CAGGCGC             CGGACTGACCGTTGA  42 18
RTCIAT899_CH02310  468700 ..  468716 -  -2.2  -3.71527   GGTCAATCAGGGAAA             GCATCGC AAGC GCG-CGC              GTAACCAGTCGCGCG  52 112
RTCIAT899_CH02290 NONE
RTCIAT899_CH02285 NONE
RTCIAT899_CH02280  464522 ..  464555 -  -7.6  -3.05844   TGGCGGATTGGAAGA     TGGCA-TTTCAGCCT ATCAG AGGCTGAAATTGTCA     CCCAGATACAGCTTG  57 7
      rpoNch NONE
RTCIAT899_CH02270  461899 ..  461951 -  -3.4  -2.59431   GTCGCCGAGAACCGA TGACGGGCAAGCGGCGGCCAGCTGC GATGAT GC-GC-GGCCGCCGCTTATCT-TCT ATTCTCAGCCTTTGA  40 30
RTCIAT899_CH02265  461340 ..  461368 - -23.3  -4.72007   CGCCACTAAAAGAAA        GAGCCGGACGATC TCT GATCGTCCGGCTC        TTATTTTTGCCTTGG 100 60
RTCIAT899_CH02255  459966 ..  460009 -  -5.2  -3.70307   GCGAGGCAACAAAGA GATGGAGCGGTTCAGGGATT CCAT AAAAACTGAACCGCTCTAGC TGCTGCGGTCAATCG  58 34
         rph NONE
RTCIAT899_CH02240 NONE
RTCIAT899_CH02235 NONE
RTCIAT899_CH02230  455130 ..  455151 -  -2.3  -2.63596   GGCCAGGTCACAGGA           TCGGC-GA TAATGCT TCTGCCGA           TCGCGCTCTTCGTCG  38 495
RTCIAT899_CH02220  453434 ..  453463 - -10.6  -2.66316   GCGTTCACCACACGA       GCTACGGCCGGC TTCATT GCCGGCCGTTTC        TTTTGGGCGATCAGG  66 55
RTCIAT899_CH02195  447870 ..  447880 -  -2.4  -4.13945   ACGTGGAGGCCAAAA                 GCCG GAT CGGG                 TGACTGGACATCATG  56 43
        ubiB  446252 ..  446278 -    -3  -4.03696   AAGAAGCATCAGAAA        GCTTGGCGATC AGCTCA GAT-GCCAGGC         GATATAGAGAAGCGT  56 8
RTCIAT899_CH02185 NONE
RTCIAT899_CH02180 NONE
RTCIAT899_CH02175 NONE
RTCIAT899_CH02170  440389 ..  440402 -  -2.3  -2.82623   GCGCGGCCAGAAGCA               GCCGC TTAC GCAAC                ATGTCGTGCCATAGG  39 312
RTCIAT899_CH02165 NONE
RTCIAT899_CH02160  437860 ..  437876 -  -2.9  -2.93858   TATGACATTGATATA              TAGCATC TTG GGCGCTA              TTTCAATTCGAGGCG  42 41
RTCIAT899_CH02155  437582 ..  437593 -  -4.4  -2.94099   GCTGTCGAGCAGATA                CTTC ACTT GAAG                 ATATCCAACTCGGGG  46 16
RTCIAT899_CH02150  437039 ..  437055 -  -3.6  -4.08692   CAACTGGGGTGAAAA              TCCCGC ACTCG GCGGCA              AGTTCTATGCGATCA  59 153
RTCIAT899_CH02120  432903 ..  432921 -  -6.6  -3.54424   GGTCATCCGTGGAAA             GCTGGCGC TGG GCGTCAAC             AATGGCGATGTCCTC  58 323
RTCIAT899_CH02110  431358 ..  431372 -  -4.3  -3.89346   TTCCGACGCGATAAA               TGCTT CGGCT AAGCA               CTCGGTCAGGTACGC  58 31
       coaBC  428907 ..  428919 -  -4.8  -4.07568   CTTCGTCTTCGAAAA                CTGG TCGTT CCAG                CACAATGGCCAGATT  61 498
        otsB NONE
        otsA  425399 ..  425442 -  -8.1  -3.48276   GCTTCTGCCAGAGAA GGTCGTGCCGATCTGCA CTAGAGGTTT TGCAGAGCGGCACGGTC CATTCACCGATCCCT  62 404
        betC  423009 ..  423060 - -12.3  -3.53811   CGCACGCTGTTCAAA CCGATCGCGCCGCCG-CAACCCGGA GACT TCCAGACCGGCGACGGCGAGA-CGG CGCGTTACTGCCAGA  79 107
RTCIAT899_CH02055 NONE
RTCIAT899_CH02050  419849 ..  419870 - -11.6  -3.27029   CGCGATCAAGGAATA           TCACGCCG TCAAGG CGGCGTGA            TCCGGGAGACCTTGC  74 73
RTCIAT899_CH02040 NONE
RTCIAT899_CH02035  416838 ..  416854 -  -8.7  -3.29144   TTACCGGCTCTAGAA              TTCCGCC ATC GGCGAAA              GCATGAGCGGCCCGA  65 3
RTCIAT899_CH02025 NONE
RTCIAT899_CH02020  414898 ..  414918 -  -2.4  -4.72272   GGCGGCGATGAAAAA            GCGGTGCC GAAAT GGCATGGC            AAGGATTTCGACAGC  68 154
        cysK  411808 ..  411839 -   -16  -4.07568   TCCGCCCGCTCAAAA      TGAAAAAGGGGTGC CGCA GCACCCCTTTCCCA       ATCAGTTGCTGCCGT 100 45
        dnaN  404557 ..  404570 -  -6.7  -4.83518   AATAACAAGAGAAAA               TGTCG CAAT CGACA                AAAGACCAAATAAAA  85 85
        pmtA NONE
RTCIAT899_CH01955 NONE
        pyrF NONE
RTCIAT899_CH01945 NONE
RTCIAT899_CH01940  401113 ..  401137 - -18.5   -5.4505   CGGGGCAATAAAAAA          CGCCGCTCGGC AAA GCCGGGCGGCG          CGTGAATTTCGTGGG 100 55
RTCIAT899_CH01935  400679 ..  400696 - -12.7  -3.80855   TCCTGGAAAAATGAA             GGCCGGT CAAA ACCGGCC              TTTTTCATGCCCGAT  90 40
RTCIAT899_CH01925 NONE
RTCIAT899_CH01920 NONE
RTCIAT899_CH01915  396807 ..  396828 - -11.7   -4.4767   TCAGTCATCACAAAA           GTCGGAAAA ATAA TTTTCCGAC            TTTGCCATAATCACT  95 156
RTCIAT899_CH01910  396089 ..  396099 -  -2.4  -3.48593   GATCCGCGCAGACAA                 TGCC CAT GGCG                 GCGGATTTTGAGACG  47 119
RTCIAT899_CH01905  394528 ..  394544 -  -7.3  -3.54935   CAAACTTGTGTCAAA              CGCTCTA GTT TAGAACG              ATTTTAAGGCGATGG  62 178
RTCIAT899_CH01900 NONE
RTCIAT899_CH01895 NONE
RTCIAT899_CH01890 NONE
RTCIAT899_CH01885  389246 ..  389273 - -10.6  -3.65902   GGCAGTCCAGCCAAA        GTCCGGATCAGCC GCG GGC-GATGCGGAC        GATGTGCTGGTCCCA  76 5
RTCIAT899_CH01875  387267 ..  387285 - -10.2  -4.32046   GGTGGAAAAAGGAAA             GCGCCGCA AGC TGCTGCGC             CGGCAGCGAATTTCC  90 168
RTCIAT899_CH01870 NONE
RTCIAT899_CH01865  386098 ..  386112 -  -2.8  -3.08211   AGTCCCTCAAAACCA               GAATAC GCC GTCTTC               GAGCGCCGTAAACAG  43 2
RTCIAT899_CH01860  383948 ..  383962 -  -4.2  -3.19656   AAAGTCATTGAGCAA               GCTCCA TTA CGAAGC               CGGCCCCGCCCATAT  48 430
RTCIAT899_CH01845  382291 ..  382312 -  -3.5  -4.33621   CAGCGAACGAAGAAA           GTACCGCCG CTAA CGTCGGCCC            TCACTTGCTGAACGT  64 107
RTCIAT899_CH01835  379756 ..  379774 -  -8.8  -3.53444   GGATTTCTCGCGAAA             GCGGCG GCAAGCG CGCCGC             CTTCGTCACGCTAGC  68 118
RTCIAT899_CH01830  378812 ..  378826 -  -3.5  -3.40403   TCTCGGCGAGCAGAA               CGCCT TCTTC AGGCA               GATCTACGATGCCGC  47 355
RTCIAT899_CH01820  377359 ..  377374 -  -6.1  -2.58544   GCCGACGTCGACAAG              CGCTG CAGCTT CAGCG               TCGATGATGCCGTCG  46 87
RTCIAT899_CH01805  373633 ..  373649 - -10.9  -3.35813   GGCGAGGTCAACGAA              TTGCTGC CTT GCAGCAA              AAGCCATTGACGGGA  73 126
RTCIAT899_CH01800  372282 ..  372308 -  -4.5  -3.87075   AGGACCGGGGACAAA        CAGC-GCCAAAA CAGC TTTCAGCGGCTG         CCATTCCTGCGCAGG  58 16
RTCIAT899_CH01795  371065 ..  371109 - -14.4  -2.75064   CTTCTCAGGGAATCA GCGGCGATCGCCTTCACCATGC GCT GCAAGGTG-AT-CGATCGCCGC TAGAGGAAATCAATC  83 35
RTCIAT899_CH01780  369756 ..  369777 -  -5.9  -3.72592   AACCTTCATGAAGAA           GTGATAGCA TATA TGCTATCAA            ATTCAAAGGTGCGGC  60 47
RTCIAT899_CH01775 NONE
RTCIAT899_CH01770 NONE
        ybaK  368530 ..  368547 -  -4.1  -2.98866   TGATATCGAAAGAAT             GGTCTGA AGAC TTAGACC              GGTTTGCGGCGAAAT  44 71
RTCIAT899_CH01760  367190 ..  367216 -  -7.3  -5.08824   CTTCCAGCCAAAAAA        GATGCCGCGGCA AGAA TACCGCGACA-C         GATAGCATTCGGCAT  91 53
RTCIAT899_CH01745  364286 ..  364301 -  -4.6  -3.68351   TCTGCATGAGGCAAA              GGTGAC GATT GTCGCC               TTCTGCCAGGGAGAT  54 268
RTCIAT899_CH01735 NONE
RTCIAT899_CH01730  360959 ..  360971 -  -3.3   -2.8474   CGCCAGCGAGAAGGA                TGGCT GGG AGCCG                GTCTGAGCGGCCTTT  41 40
RTCIAT899_CH01720 NONE
RTCIAT899_CH01715 NONE
RTCIAT899_CH01700  355518 ..  355542 - -13.6  -3.06515   TTTCAGTCTCAAAAT          GACACCGGCC TTGAT GGCCGATGTC          TCTGTCTGGGCTGCA  84 56
RTCIAT899_CH01695 NONE
        pbpC NONE
RTCIAT899_CH01685  347157 ..  347176 - -13.6  -3.66772   GCAAACTCCCAACAA            TCTCCCCC TTGT GGGGGAGA             TGTCCCGACAGGGAC  89 94
RTCIAT899_CH01645  340500 ..  340524 -  -2.7  -3.53012   GCGGCGGCGGCCAAA          GGAGGCCGC GCACTAA GAGGCCTGC          AGGTATCTGCTTGTT  49 42
RTCIAT899_CH01640  339654 ..  339684 -   -11  -5.20216   TACATGATGAAAAAA       CGAAAGGCCGGTCC GAG GGGCCGGCCTATCT       GCGTTTAACAGTTTG 100 47
RTCIAT899_CH01625  337369 ..  337384 -  -5.4  -3.55444   GTTCTACTTGGCAAA              TGCTCC ACGG AGAGCA               CGACGCTGGTACAGC  55 123
RTCIAT899_CH01610  334356 ..  334385 -  -9.1  -3.05384   CGGCTGTTGATGGAA       GCCGCTGAGCGCG AAGC CGCGCGTATCGGC        AAGACCTTGCTGGTG  60 187
        lepA NONE
RTCIAT899_CH01590  331140 ..  331168 -  -5.2  -4.21194   CTGGACGAGCGAAAA       GC-TGCCCTGGGT GACG ACCCCGGCCAAGC        ACAGCTACGCCGCAC  65 120
RTCIAT899_CH01575  329309 ..  329324 -  -3.2  -2.99546   CCAGAAACTGAGACA              GCATCA AACC TGGTGC               GCCGAGCGCTATCGC  43 135
        noeK  327361 ..  327396 -  -9.6    -5.055   TCAATCGCGAAAAAA    GCGGTTGAAGCCCGGGT CAA ACCCGGGCTGCGGCC-C    ATGCGCTGATCAGGC 100 6
RTCIAT899_CH01555  326627 ..  326657 -  -6.1  -3.47322   TGCGATCATAACCAA      CGCGCTCGATGCGG CAAA CTGCAT-GAGCGAG       GAATGGCCTGTTGTC  55 244
RTCIAT899_CH01540  325888 ..  325898 -  -8.2  -2.62613   GCGGATCTGAAAGAT                 CGCG ACG CGCG                 GCTCCGTCCTTCGAT  56 142
RTCIAT899_CH01520  321444 ..  321454 -  -2.4  -4.07568   GGGCCGCGGTGAAAA                 TGCG CAA CGCT                 GTCGCCTCTATTCCA  56 33
RTCIAT899_CH01515 NONE
RTCIAT899_CH01510  318459 ..  318470 -  -7.2  -2.64416   GAGGTGGACTACAAG                GGCC AGAG GGCC                 GTGCTGCCGGTGACG  49 413
RTCIAT899_CH01475  311400 ..  311413 -  -6.7  -3.34043   GCGACCAGGCGAGAA               GCTCT ATGA AGAGC                TGTTGATCGGCGACA  56 382
        eglA  306514 ..  306526 -  -6.2  -3.87075   ATGATTCGCGACAAA                GGGC CGGTT GCCC                GTCAGCGGTCATTTC  63 34
RTCIAT899_CH01455  305173 ..  305199 -  -2.3  -4.60487   GATGACGGGCAAAAA         GCCGTTC CCGTTGCGTCTTC GAACGGC         GTATCCCCGCCTCAG  65 37
RTCIAT899_CH01450  304119 ..  304134 -  -4.6  -3.83205   AGCGGTGATATCAAA              TCGCGC GCCG GAGCGA               AAAGGAAAGAAAGGT  58 64
RTCIAT899_CH01445  303489 ..  303505 -  -3.6  -3.26712   ATGGGCAAGAAGATA              GGCCAC GGAAT GCAGCC              GGCTAGCCGTAAGGG  47 42
RTCIAT899_CH01440  300043 ..  300062 - -10.6  -2.64243   TCACATTCGACAGCA            CGGGCGGG AGAG CGCGCCCG             AACGGTCATTGCCAA  66 423
RTCIAT899_CH01435  299686 ..  299717 - -12.4  -5.00884   ATGGCCTCGAAAAAA      GCCCCCACC-CTGAT TCT ATCAAAGGTGAGGGC      TGGGGATGGGATTGA 100 66
RTCIAT899_CH01430 NONE
RTCIAT899_CH01425 NONE
RTCIAT899_CH01420  295838 ..  295874 -  -5.9  -2.71712   GGTTGGCTTCGAAAG  GGTTCGCGG-CGGGCGAA GCGA TCCGCCCATCCGCG--CC   TGCAGGCAAAGAGCT  50 40
RTCIAT899_CH01415 NONE
RTCIAT899_CH01410 NONE
RTCIAT899_CH01405  292321 ..  292341 -  -5.3  -2.51173   ATCAACGCGATCAAG            CGCAGCTTC CTC GAAGCGCCG            GAAGTGCAGCAATGC  45 239
RTCIAT899_CH01395  290827 ..  290845 -    -3   -3.6106   TGGAAGATCCCGAAA             CCATCGTC CAC GCCAACGG             CCATACCATGACCGT  49 183
        tadD  286631 ..  286649 -  -2.3  -3.10464   TCAGCAATCCGAAGA             CGGCCAT TTTCT ACGGCAG             TATCTTCGCCGCACT  41 365
        pilQ NONE
RTCIAT899_CH01315 NONE
RTCIAT899_CH01310 NONE
        deoB  273581 ..  273593 -  -5.5  -3.61371   AAATGCGATGTCAAA                GGAAG CTC CTCCC                GTGCGGTCCTGCCGC  55 8
         add NONE
         upp  271810 ..  271835 - -16.9  -5.14163   AGCGATCAATAAAAA         GCCCGGCAGTC GAAT AACTGCCGGGC          TTCCTGAAAAGTATT 100 50
RTCIAT899_CH01290  271078 ..  271088 -  -2.4  -4.11484   GGCAAGCGCGCAAAA                 GGCC GCG GGCG                 CTTTGTCGGCTAACT  57 146
RTCIAT899_CH01220  258544 ..  258565 - -17.3  -4.62783   CATGGATTCGAAAAA           CCCGGCCGA CCCT TCGGCCGGG            TTTCATCTTTCAGGC 100 63
RTCIAT899_CH01210  256195 ..  256205 -    -4   -3.9373   GACTTAAAACTTAAA                 TATG GAC CATA                 GAGTGTCTCGATAGC  58 476
RTCIAT899_CH01195  253772 ..  253787 -  -2.4  -3.29043   AATGCCTTCGTACAA              GGCCCA GGCG CGGTCC               CCGATCATGCCGTGT  44 525
RTCIAT899_CH01180 NONE
RTCIAT899_CH01175  250942 ..  250954 -  -6.3  -3.63515   CGGGAGTTCGAATAA                GATGA TGG TCATC                ATTTATTCCAACGAT  60 66
RTCIAT899_CH01170 NONE
RTCIAT899_CH01165  248781 ..  248794 -  -3.7  -3.41602   CTCAGCCGATGACAA               GGGCG GAGC CGACC                GGCAAGGTTTGCTGG  47 244
RTCIAT899_CH01155  247260 ..  247281 -  -8.7  -2.64616   TCGCGATCGAGATCA           GGC-TGGCGA TCA CCGCCAAGCC           CAACGAGCTCTCCGT  56 209
RTCIAT899_CH01145  244070 ..  244114 -  -7.9  -4.31587   TCGTAAAAACAAGAA GATAGAGCGTTTTCGCGATTC GAA GAAAAGCGAAAATACTCTAAC GGTTTTCCGTCCGGA  77 54
RTCIAT899_CH01105  234176 ..  234188 -  -3.4  -2.62184   TTTGCCGCGAGACTA                TCCT GAAAA AGGA                TGGAAGTGAATCCGC  40 101
        mepA  233044 ..  233069 -  -5.3  -3.25823   CGCCTTCTATACCAA         GGGGGCGCGTT TTGA AAGACGCCTCC          GGCAAGGACGATCCA  52 45
        mgsA NONE
         glk  231508 ..  231532 - -11.4  -2.83903   CTCTTCAAAAAGGTA          GGCGCGCC GGCTGTTTT GGCGCGCC          ATGGGCTGTTTGGCA  69 45
        msbA NONE
        dapB  228663 ..  228704 -  -6.4  -4.84311   TGCGAGACAATAAAA GGCTGGAGCGGATCGGCA GTTCGG TGCAGACCCGCTCCGGGA  TCGGATCAACGTGTG  83 31
RTCIAT899_CH01075  227755 ..  227767 -  -9.1   -2.5955   ACCGTCGAGAATTGA                GGCTG GTA CAGCC                CCTCATCCGGCCTGT  59 210
        phnG NONE
        phnH NONE
        phnI NONE
        phnJ NONE
        phnK NONE
        phnL NONE
RTCIAT899_CH01035 NONE
RTCIAT899_CH01030  221095 ..  221106 -  -5.8  -3.35597   TTTAGCCGTCAAACA                TGCC GGTC GGCA                 GGCCGTCCATGCTGA  56 0
        phnC  219963 ..  219977 -  -3.4  -4.38927   GTCTGATAGAAGAAA               TGCGCC CTT GACGCG               GGCCTTCGATCCCGG  64 50
        phnD  218956 ..  218977 - -18.7   -4.4261   GTGTGAATAGCAAAA           GGGCGGCCG TTGC CGGCCGCCC            CATTATCGGGATGTG 100 43
RTCIAT899_CH01015 NONE
RTCIAT899_CH01010  216488 ..  216516 - -15.9  -3.55622   TCGAATCCGGCTAAA        GCCGGCCTGACCG CTA CGGTCCTGCCGGC        CTGCGCTACCGGATT 100 85
RTCIAT899_CH01005 NONE
       phnM1 NONE
        phnN  213703 ..  213745 - -15.9  -3.53012   CTGGCGGGCGGGAAA GCAAAATC-AGGACTTAGCC GCCA GGCTAAGTGCTAGATTTTGC AAGGGCGGGGGTAGG 100 224
RTCIAT899_CH00985  209765 ..  209784 -  -8.6  -3.37533   GCGCAAAAGCATGAA            GCGGCTTT GCGG AAAACCGC             CGCGCCCTTTTCTTG  64 49
RTCIAT899_CH00975  205735 ..  205763 - -11.6  -2.78679   CGGTCGCAGCGAAAT        GGCACGGCGGCG TTTCC CGCCGCCCTGGC        GGGATGGTCGCGGGA  69 73
RTCIAT899_CH00970  204676 ..  204691 -  -4.6  -2.74012   CTATGATTTCAACGA              TGAGGC AATC GCCTCG               GGTGTGGCTTTCTGG  43 118
RTCIAT899_CH00940 NONE
        cyoB NONE
        cyoC  193755 ..  193768 -  -2.3  -3.33162   GAGCTCATCCGAGAA               CTCCC ATGA GGTAG                ACGAGGGAAAACACG  45 1
        cyoD  193308 ..  193335 -   -17  -3.01712   TTCGCGCCGGGAAGA        GGGCGGGCCTTC GCCT GAAGGCCCGCCG         CTCGATCTTATGGCA 100 33
RTCIAT899_CH00920  191868 ..  191882 -  -2.8  -3.76492   CCGAACTGCATGAAA               GGGA CGCGGAT TCCC               TAACGCTCTGGATGA  52 402
RTCIAT899_CH00910 NONE
RTCIAT899_CH00905 NONE
RTCIAT899_CH00900  189630 ..  189654 - -15.7  -3.52073   CTGGTAAGATCAGAA          GCACCGCCGCA TCT TGCGGCGGTGT          CTTGTTGAGGGCAGT 100 104
RTCIAT899_CH00890  187415 ..  187436 - -15.9  -4.87133   ATGCTGCAAACAAAA           TGGCGCCCT CGTC AGGGCGCCA            TCGTCTTTGGGAATA 100 55
RTCIAT899_CH00860  180667 ..  180686 -  -4.2  -3.30635   TAAATTCCGTGAGAA            CGCCGC GGGAGTGT GCGGCA             TGCCCTGTTACATGC  49 33
RTCIAT899_CH00855 NONE
RTCIAT899_CH00850 NONE
RTCIAT899_CH00845  177613 ..  177628 - -11.8  -3.21395   AGCCGTGTTACAATA              GGCCGC TAAC GCGGCC               TTTGTCGCTTCTGAA  78 364
RTCIAT899_CH00810  170538 ..  170552 -  -4.2  -3.01712   GCTCTGTCTGGAAGA               CCGC GAAGGAG GCGG               ATTGAATGCCGTCGT  46 145
RTCIAT899_CH00795 NONE
RTCIAT899_CH00790  166676 ..  166698 -    -4   -4.4261   GCCGCAACAGCAAAA           TGCGGTCAGC TCG GCCGACGCCA           GCCGCTTCCGCTCCA  66 8
       purC2  165478 ..  165506 -  -2.6  -5.01732   AAGTGTTGCAAAAAA       CATACCCTTGCATC CAC AAT-CAAGGG-ATG       TGAATGGCGCAAAAC  74 111
RTCIAT899_CH00780  163705 ..  163726 - -13.7  -5.45802   CGCCCAAAAGAAAAA           CCGCCACAG ATCC CTGCGGCGG            TTTTCAAGTTCGAGC 100 73
RTCIAT899_CH00775  162164 ..  162190 - -22.4   -4.7373   GCACTTCACCAAAAA         GGCCGGCGACTT TCA AAGTCGCCGGCC         TTTTAGCTTTTCAGG 100 59
RTCIAT899_CH00760  158235 ..  158245 -    -4  -4.33165   CGAAATCCAGCAAAA                 CAAA TGG TTTG                 TCGCTCAAATTCCAC  64 244
        dnaK  156089 ..  156117 - -10.9  -2.64472   GACCCCGGAAATGGA        TTTCCGGCTGCCC CGA AGGCAGCCGGATT        TAAGTCTCCTAGAAC  66 55
        dnaJ  154869 ..  154890 - -15.9   -5.4505   GTCCCCAACAAAAAA           TCCGGCCGA ATCA TCGGCCGGA            TTGATGTGAAACACT 100 54
RTCIAT899_CH00740  152303 ..  152315 -  -3.4  -2.92613   TCTGAGGTCAAAGGA                TCCA TGTGC TGGA                GTTTAGCACAATCGC  42 168
RTCIAT899_CH00735 NONE
RTCIAT899_CH00730  150643 ..  150653 -  -5.4  -3.15999   CGGCCATATACCGAA                 GATC GAG GATC                 AGCCCTGGCCTGCCT  50 433
RTCIAT899_CH00715  147765 ..  147775 -  -2.4  -3.68325   CATACGCCAAGATAA                 CCGG TCT CCGT                 TTTTCATACCGGATA  50 97
        cadD  146793 ..  146841 -   -11  -3.06162   CAGCCGATTGCAAGA TCGCCGC-CGTGACGACGG-GCAA GGA TGGCGCCGTCGTCGTGCGCGGCAA TGAGCGCTATGTCGT  68 335
RTCIAT899_CH00700  144702 ..  144718 -  -2.1   -2.9348   CCGAAAGCGGAGAGA              TGCCGTT ACG ATCGGCG              GGTTTCGGCCTCGGT  40 40
RTCIAT899_CH00695  143420 ..  143437 - -14.1  -4.67011   AACGTGATTGAAAAA             CGCGGCC GTCA GGCCGCG              TTTTTGTGTGGCTCG 100 42
        kdsB NONE
RTCIAT899_CH00680  140796 ..  140806 -  -5.4  -3.73072   AAGTTCGCCATCAAA                 TTGC GTG GCAA                 GGAAGCGCGGGCACC  60 247
RTCIAT899_CH00645  135194 ..  135210 -  -2.1   -2.8655   TTGAGCGACAGGATA              TGTCGTC ATG GTCGTCA              ACCGCTTCAAGCCGA  40 69
RTCIAT899_CH00640  134384 ..  134396 -  -7.7  -3.68827   TATCGATCATCGAAA                TCCTG CAG CAGGA                TGGGCGAATCTCGGT  64 453
RTCIAT899_CH00630  133573 ..  133591 -  -2.3  -3.17725   CGGCAAAAACAAGCA             GCGTCGA TAGGC TCATCGC             ATTCCCTCCGGTCAG  43 116
RTCIAT899_CH00625  132938 ..  132967 -  -7.1   -3.4252   GCCTATCCATTATAA       GCTGCG-GGCGTTC ATC GAAAGCGACGCAGC       GGCCTGAAATCACCG  58 35
        recR  131593 ..  131613 - -12.6  -3.14931   GCCACGGGCTACCAA            TCTCCCCC CTTGT GGGGGAGA            TGTCACGAAGTGACA  81 100
RTCIAT899_CH00610  130101 ..  130123 -  -7.7   -5.4505   CGCGCTAATAAAAAA          GAGCGGGTCC TTGC GG-CCCACTC           TTCATCACACGATCA 100 112
RTCIAT899_CH00605 NONE
RTCIAT899_CH00600 NONE
RTCIAT899_CH00595  127072 ..  127082 -  -4.6  -3.53761   GAAGCGTCCGGCAAA                 GGCC GGT GACC                 GCGTCATTGTTTTCG  52 29
RTCIAT899_CH00590  124218 ..  124237 - -12.1  -4.88407   GCATCCAATGAAAAA            CCGCCGG TTTTGG CCGGCGG             TTTTGATATCTCGCA 100 55
RTCIAT899_CH00585 NONE
        rbfA NONE
RTCIAT899_CH00575  122021 ..  122036 -  -3.3  -3.77831   TCAGGAACAGGGAAA              GGAAT GCAAGT ATTCC               GAATGCAACTCTGCG  54 136
RTCIAT899_CH00570  121160 ..  121178 -  -4.6  -3.85698   GGCGCTGCCTATAAA             CCAATTGA GCG CCAATTGA             AAGAGGGTTCTCCCT  58 50
        rpsO  120742 ..  120773 - -22.4   -2.8294   TACCCTTCATAAGCA      TCCGGCGGACGTTC AGGT GAACGCCCGCCGGA       AATTCCGTTAGCGGC 100 33
         pnp  118270 ..  118293 -   -16  -5.10767   CATTCAACATAAAAA          GGGCGCGGAA GAGA TCCCGCGCCC           CGGAACTTGGATGAA 100 49
RTCIAT899_CH00555  116973 ..  116990 - -10.5   -4.7878   GATCCATAAAAGAAA             GGCGGCC ATCT GACCGCC              ATCCTTCCTTACTTC 100 34
         irr  111497 ..  111550 -  -9.7  -2.62522   GGAGGCAATAGGAAT TAGGCAGTAGGCAATAGTGGAAGTCT GGA AGACAATT-CTACTGCCTACTGCCTA CTGCCTACTGCCTAC  63 78
RTCIAT899_CH00515  110046 ..  110068 -  -5.4  -2.89564   CTTCGATTTCACACA           GCCCTCGCGC AAT GCGCAACTGC           TGGCGACCGGATTGC  48 174
RTCIAT899_CH00485 NONE
         cmk  106250 ..  106287 -  -6.9  -3.57462   CAGGCTATCTTGAAA   TCGGCGGTTTCCGGCGCG AGG CGCGC-GAAAGCCGCTCA   TATTTTCAGGCATTT  60 31
        rpsA  104359 ..  104380 - -14.4  -5.38958   ACGGACAAAGAAAAA           CCCGCCGG GTCGCT CCGGCGGG            TCTTTTGTTTCCAGG 100 54
        gabT   99264 ..   99281 -  -2.7  -3.53224   CATTGCCGTTGTAAA             GGACATGC TAT GCAC-TCC             GACAGGTTTCACCCG  49 86
RTCIAT899_CH00450 NONE
        copD   95733 ..   95773 -  -8.3  -3.13836   GTAAAAACAAGGAGA  TAGAGCATTTTCGCGATTC GAA GAAAAGCGAAACGGCTCTA  GACCGGCTCCATCAT  60 23
RTCIAT899_CH00425   92378 ..   92397 -  -3.5  -4.26903   TTTAGCGCAGGAAAA            TGATGCG TGACAT CGCATCC             CCGCCGCCCCCAAGA  64 154
RTCIAT899_CH00420 NONE
RTCIAT899_CH00415 NONE
RTCIAT899_CH00410   89543 ..   89553 -  -2.4  -3.14132   CTGTCTTGGGAGTAA                 GGGC AGC GCCT                 ACCGCAATCGGTTGC  42 24
RTCIAT899_CH00405   87435 ..   87459 - -21.5  -4.24204   GACGCATACGCAAAA          GGCCCATCCGG TTT CCGGATGGGCC          TTTTGCGTCAATAAT 100 63
RTCIAT899_CH00395   86041 ..   86061 -  -7.5  -3.65902   TGCAGCTTATCGAAA            CCATCTTCG ATC CGCAGACGG            TGATCCTCTGCGGCG  60 241
RTCIAT899_CH00385   83566 ..   83592 - -15.1  -2.57795   TGGAGGATCAAGCGA         GGCGGGCGGTG ACTGG CACCGCCCGGC         AAGAGTATCAGAGAC  83 33
RTCIAT899_CH00380 NONE
RTCIAT899_CH00375 NONE
RTCIAT899_CH00370 NONE
RTCIAT899_CH00365 NONE
RTCIAT899_CH00360   78716 ..   78727 -  -3.6  -3.51096   GAAATAAAATTAATA                CGGC TGGC ACCG                 GAGATTGCTGTGGTT  51 84
RTCIAT899_CH00355   77313 ..   77337 -  -2.8  -3.35996   TATGGGTATGCAGAA          CCTTCGTC CGTTGCCTT GACGATGG          CGTCTCTACCAATCT  47 108
RTCIAT899_CH00350   76376 ..   76395 -  -5.6  -5.40072   CTGGCTTGAAAAAAA            GCGTGCCG ACCT CGGCAGAC             CGGGCATCAGAAGCG  95 32
RTCIAT899_CH00345   75815 ..   75865 - -24.9  -4.20918   TTGAATGCGAATAAA TCCCCTAGCTGTCCAGCGGAAGC CGGAT GATTCCGCTGGACAGCTAGGGAC CAACTCAATCCCGAC 100 30
        hrpB NONE
RTCIAT899_CH00300 NONE
RTCIAT899_CH00295   63505 ..   63548 -  -9.5  -2.62263   ATGGCGCCCATATGA TCCGCGAGGCGCCGG-AGCA TCGCC TGCCGCCGGCGACACGCAAA TCGGTAACGCTCAAC  56 221
RTCIAT899_CH00285   62241 ..   62266 - -20.5  -5.27938   AGCCCCAAATAAAAA         GGCCGCCGGAT ACCG ATCCGGCGGCC          TTTTTCAATCCGAAT 100 50
        hisB   51867 ..   51877 -  -3.2  -2.60813   GAGCGTCGGAAATAG                 GAAC GCC GTCC                 ACGAAAAACCGTCAC  40 152
RTCIAT899_CH00245 NONE
        hisH NONE
        hisA NONE
        hisF   49284 ..   49301 -  -5.5  -2.52464   CTGTCTCCTAATCCA             GCCGCAT CGGA ATGCCGC              GCTCGGCCATGTAGC  46 0
        hisE NONE
        coaA   47781 ..   47806 -  -4.7  -2.75481   TCTCAACCGCAACGA         TCGCACGCT ATCCTTCA AGCTTGCGA          GCGGCGATATCGTCG  43 163
RTCIAT899_CH00200   43716 ..   43732 -  -9.4  -3.61398   GGCCCTTTCGAAGAA              CGGGGT TCGCG ACCCCG              TCCGCATGCTCTTAT  68 93
RTCIAT899_CH00195 NONE
RTCIAT899_CH00190   41317 ..   41356 -  -2.7  -3.71378   CATGGCATACGCAAA  CAGGTGGCCAATACCGC AATGCA GCAATGTCGTCCACCGG   TGGGGGGACATCTTG  51 109
RTCIAT899_CH00185 NONE
RTCIAT899_CH00180   40434 ..   40471 -  -7.7  -2.72344   CTCCAGCCTGAACGA   TGCAGTCGCGCCGCGG GCAGACG CCTCGGC-CGAATGCA   ACAAGAATTGCACGC  55 145
        ahcY   38953 ..   38983 -  -9.1   -5.0133   GAGCTGGCTAAAAAA      TAAGCCCCGGCATT TGTC AATGCCAGGGCC-A       CAAGATGTTGTGGAT 100 54
RTCIAT899_CH00170 NONE
RTCIAT899_CH00165   34578 ..   34589 -  -3.6  -3.46602   CTTTCCATAGCACAA                GGCC GGAA AGCC                 GTCGCGGGGCCTGGT  51 44
RTCIAT899_CH00160 NONE
        addB NONE
        addA NONE
        trxA   26611 ..   26626 - -11.8   -5.5112   CGGACCAACAAAAAA              CCCCGC CGAA GCGGGG               TTCTTGTTCCTACAG 100 51
RTCIAT899_CH00105   18283 ..   18336 -  -6.5  -3.01712   CGGCCTGCCGGAACA TGCCGGCCGCCGCATCGCCACCTTCC TCA AGAAGGAGGCG-CGCGCCGATCTGGA AAAGCTTGTGGCTGT  52 429
RTCIAT899_CH00070 NONE
RTCIAT899_CH00065   10864 ..   10903 - -17.2  -3.13522   ATTGTTCGACGAAGA  CACAAAAGGCCCGCCGGA TAGT TTCGGCGGGCCTTTTGCT   TTTTTATCGATTACT 100 36
RTCIAT899_CH00035    4683 ..    4695 -  -5.5  -3.25824   TAGCATTTAGAAAAG                GGGCT TAC AACCC                TTATGGCTCCGGCAC  52 56
        secB    4089 ..    4121 - -17.2  -4.56133   TTTCAAGAATCAAAA      GAAAATGCCCGGAC GTGCG ATCCGGGCATTTTC      GTTTCCAGAACAGGA 100 52
