R2APBS1_0011	PWY-6012	acyl carrier protein metabolism I
R2APBS1_0011	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
R2APBS1_0014	PWY-6672	<i>cis</i>-genanyl-CoA degradation
R2APBS1_0014	PWY-7118	chitin degradation to ethanol
R2APBS1_0026	PWY-5484	glycolysis II (from fructose 6-phosphate)
R2APBS1_0035	PWY-6134	L-tyrosine biosynthesis IV
R2APBS1_0035	PWY-7158	L-phenylalanine degradation V
R2APBS1_0068	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
R2APBS1_0068	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
R2APBS1_0079	PWY-381	nitrate reduction II (assimilatory)
R2APBS1_0079	PWY-5675	nitrate reduction V (assimilatory)
R2APBS1_0079	PWY-6549	L-glutamine biosynthesis III
R2APBS1_0079	PWY-6963	ammonia assimilation cycle I
R2APBS1_0079	PWY-6964	ammonia assimilation cycle II
R2APBS1_0126	PWY-5663	tetrahydrobiopterin biosynthesis I
R2APBS1_0126	PWY-5664	tetrahydrobiopterin biosynthesis II
R2APBS1_0126	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
R2APBS1_0126	PWY-6703	preQ<sub>0</sub> biosynthesis
R2APBS1_0126	PWY-6983	tetrahydrobiopterin biosynthesis III
R2APBS1_0126	PWY-7442	drosopterin and aurodrosopterin biosynthesis
R2APBS1_0129	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
R2APBS1_0129	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
R2APBS1_0129	PWY-7242	D-fructuronate degradation
R2APBS1_0129	PWY-7310	D-glucosaminate degradation
R2APBS1_0130	PWY-5101	L-isoleucine biosynthesis II
R2APBS1_0130	PWY-5103	L-isoleucine biosynthesis III
R2APBS1_0130	PWY-5104	L-isoleucine biosynthesis IV
R2APBS1_0130	PWY-7111	pyruvate fermentation to isobutanol (engineered)
R2APBS1_0131	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
R2APBS1_0131	PWY-6855	chitin degradation I (archaea)
R2APBS1_0131	PWY-6906	chitin derivatives degradation
R2APBS1_0132	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
R2APBS1_0136	PWY-6906	chitin derivatives degradation
R2APBS1_0136	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
R2APBS1_0136	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
R2APBS1_0166	PWY-2723	trehalose degradation V
R2APBS1_0166	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
R2APBS1_0166	PWY-5661	GDP-glucose biosynthesis
R2APBS1_0166	PWY-7238	sucrose biosynthesis II
R2APBS1_0166	PWY-7385	1,3-propanediol biosynthesis (engineered)
R2APBS1_0168	PWY-6902	chitin degradation II
R2APBS1_0212	PWY-3781	aerobic respiration I (cytochrome c)
R2APBS1_0212	PWY-4302	aerobic respiration III (alternative oxidase pathway)
R2APBS1_0212	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
R2APBS1_0212	PWY-5690	TCA cycle II (plants and fungi)
R2APBS1_0212	PWY-6728	methylaspartate cycle
R2APBS1_0212	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
R2APBS1_0212	PWY-7254	TCA cycle VII (acetate-producers)
R2APBS1_0212	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
R2APBS1_0213	PWY-3781	aerobic respiration I (cytochrome c)
R2APBS1_0213	PWY-4302	aerobic respiration III (alternative oxidase pathway)
R2APBS1_0213	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
R2APBS1_0213	PWY-5690	TCA cycle II (plants and fungi)
R2APBS1_0213	PWY-6728	methylaspartate cycle
R2APBS1_0213	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
R2APBS1_0213	PWY-7254	TCA cycle VII (acetate-producers)
R2APBS1_0213	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
R2APBS1_0263	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
R2APBS1_0263	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
R2APBS1_0265	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
R2APBS1_0273	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
R2APBS1_0273	PWY-6853	ethylene biosynthesis II (microbes)
R2APBS1_0273	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
R2APBS1_0276	PWY-3781	aerobic respiration I (cytochrome c)
R2APBS1_0276	PWY-4521	arsenite oxidation I (respiratory)
R2APBS1_0276	PWY-6692	Fe(II) oxidation
R2APBS1_0276	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
R2APBS1_0312	PWY-5663	tetrahydrobiopterin biosynthesis I
R2APBS1_0312	PWY-5664	tetrahydrobiopterin biosynthesis II
R2APBS1_0312	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
R2APBS1_0312	PWY-6703	preQ<sub>0</sub> biosynthesis
R2APBS1_0312	PWY-6983	tetrahydrobiopterin biosynthesis III
R2APBS1_0312	PWY-7442	drosopterin and aurodrosopterin biosynthesis
R2APBS1_0326	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
R2APBS1_0326	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
R2APBS1_0335	PWY-6123	inosine-5'-phosphate biosynthesis I
R2APBS1_0335	PWY-6124	inosine-5'-phosphate biosynthesis II
R2APBS1_0335	PWY-7234	inosine-5'-phosphate biosynthesis III
R2APBS1_0341	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
R2APBS1_0341	PWY-6416	quinate degradation II
R2APBS1_0341	PWY-6707	gallate biosynthesis
R2APBS1_0376	PWY-1042	glycolysis IV (plant cytosol)
R2APBS1_0376	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
R2APBS1_0376	PWY-5484	glycolysis II (from fructose 6-phosphate)
R2APBS1_0376	PWY-6531	mannitol cycle
R2APBS1_0376	PWY-7385	1,3-propanediol biosynthesis (engineered)
R2APBS1_0377	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
R2APBS1_0384	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
R2APBS1_0385	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
R2APBS1_0385	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
R2APBS1_0385	PWY-6897	thiamin salvage II
R2APBS1_0385	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
R2APBS1_0385	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
R2APBS1_0385	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
R2APBS1_0385	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
R2APBS1_0393	PWY-4261	glycerol degradation I
R2APBS1_0402	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
R2APBS1_0402	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
R2APBS1_0404	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
R2APBS1_0404	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
R2APBS1_0405	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
R2APBS1_0405	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
R2APBS1_0405	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
R2APBS1_0411	PWY-5988	wound-induced proteolysis I
R2APBS1_0411	PWY-6018	seed germination protein turnover
R2APBS1_0415	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
R2APBS1_0415	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
R2APBS1_0415	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
R2APBS1_0415	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
R2APBS1_0415	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
R2APBS1_0415	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
R2APBS1_0415	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
R2APBS1_0415	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
R2APBS1_0417	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
R2APBS1_0417	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
R2APBS1_0417	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
R2APBS1_0417	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
R2APBS1_0417	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
R2APBS1_0417	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
R2APBS1_0417	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
R2APBS1_0417	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
R2APBS1_0476	PWY-5331	taurine biosynthesis
R2APBS1_0514	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
R2APBS1_0514	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
R2APBS1_0515	PWY-3961	phosphopantothenate biosynthesis II
R2APBS1_0521	PWY-31	canavanine degradation
R2APBS1_0521	PWY-4984	urea cycle
R2APBS1_0521	PWY-6305	putrescine biosynthesis IV
R2APBS1_0521	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
R2APBS1_0524	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
R2APBS1_0549	PWY-1042	glycolysis IV (plant cytosol)
R2APBS1_0549	PWY-5484	glycolysis II (from fructose 6-phosphate)
R2APBS1_0549	PWY-6901	superpathway of glucose and xylose degradation
R2APBS1_0549	PWY-7003	glycerol degradation to butanol
R2APBS1_0551	PWY-1042	glycolysis IV (plant cytosol)
R2APBS1_0551	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
R2APBS1_0551	PWY-5484	glycolysis II (from fructose 6-phosphate)
R2APBS1_0551	PWY-5723	Rubisco shunt
R2APBS1_0551	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
R2APBS1_0551	PWY-6886	1-butanol autotrophic biosynthesis
R2APBS1_0551	PWY-6901	superpathway of glucose and xylose degradation
R2APBS1_0551	PWY-7003	glycerol degradation to butanol
R2APBS1_0551	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
R2APBS1_0551	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
R2APBS1_0553	PWY-1042	glycolysis IV (plant cytosol)
R2APBS1_0553	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
R2APBS1_0553	PWY-5484	glycolysis II (from fructose 6-phosphate)
R2APBS1_0553	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
R2APBS1_0553	PWY-7385	1,3-propanediol biosynthesis (engineered)
R2APBS1_0557	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
R2APBS1_0557	PWY-5723	Rubisco shunt
R2APBS1_0557	PWY-6891	thiazole biosynthesis II (Bacillus)
R2APBS1_0557	PWY-6892	thiazole biosynthesis I (E. coli)
R2APBS1_0557	PWY-6901	superpathway of glucose and xylose degradation
R2APBS1_0557	PWY-7560	methylerythritol phosphate pathway II
R2APBS1_0559	PWY-1042	glycolysis IV (plant cytosol)
R2APBS1_0559	PWY-5484	glycolysis II (from fructose 6-phosphate)
R2APBS1_0559	PWY-6886	1-butanol autotrophic biosynthesis
R2APBS1_0559	PWY-6901	superpathway of glucose and xylose degradation
R2APBS1_0559	PWY-7003	glycerol degradation to butanol
R2APBS1_0566	PWY-6749	CMP-legionaminate biosynthesis I
R2APBS1_0570	PWY-5659	GDP-mannose biosynthesis
R2APBS1_0570	PWY-6073	alginate biosynthesis I (algal)
R2APBS1_0570	PWY-6082	alginate biosynthesis II (bacterial)
R2APBS1_0570	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
R2APBS1_0573	PWY-3221	dTDP-L-rhamnose biosynthesis II
R2APBS1_0573	PWY-6808	dTDP-D-forosamine biosynthesis
R2APBS1_0573	PWY-6942	dTDP-D-desosamine biosynthesis
R2APBS1_0573	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
R2APBS1_0573	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
R2APBS1_0573	PWY-6974	dTDP-L-olivose biosynthesis
R2APBS1_0573	PWY-6976	dTDP-L-mycarose biosynthesis
R2APBS1_0573	PWY-7104	dTDP-L-megosamine biosynthesis
R2APBS1_0573	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
R2APBS1_0573	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
R2APBS1_0573	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
R2APBS1_0573	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
R2APBS1_0573	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
R2APBS1_0573	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
R2APBS1_0573	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
R2APBS1_0573	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
R2APBS1_0574	PWY-3221	dTDP-L-rhamnose biosynthesis II
R2APBS1_0574	PWY-6808	dTDP-D-forosamine biosynthesis
R2APBS1_0574	PWY-6942	dTDP-D-desosamine biosynthesis
R2APBS1_0574	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
R2APBS1_0574	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
R2APBS1_0574	PWY-6974	dTDP-L-olivose biosynthesis
R2APBS1_0574	PWY-6976	dTDP-L-mycarose biosynthesis
R2APBS1_0574	PWY-7104	dTDP-L-megosamine biosynthesis
R2APBS1_0574	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
R2APBS1_0574	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
R2APBS1_0574	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
R2APBS1_0574	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
R2APBS1_0574	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
R2APBS1_0574	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
R2APBS1_0574	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
R2APBS1_0574	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
R2APBS1_0585	PWY-6749	CMP-legionaminate biosynthesis I
R2APBS1_0591	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
R2APBS1_0592	PWY-5278	sulfite oxidation III
R2APBS1_0592	PWY-5340	sulfate activation for sulfonation
R2APBS1_0592	PWY-6683	sulfate reduction III (assimilatory)
R2APBS1_0592	PWY-6932	selenate reduction
R2APBS1_0593	PWY-5278	sulfite oxidation III
R2APBS1_0593	PWY-5340	sulfate activation for sulfonation
R2APBS1_0593	PWY-6683	sulfate reduction III (assimilatory)
R2APBS1_0593	PWY-6932	selenate reduction
R2APBS1_0602	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
R2APBS1_0602	PWY-7494	choline degradation IV
R2APBS1_0612	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
R2APBS1_0621	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
R2APBS1_0621	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
R2APBS1_0632	PWY-5344	L-homocysteine biosynthesis
R2APBS1_0694	PWY-2721	trehalose degradation III
R2APBS1_0694	PWY-2722	trehalose degradation IV
R2APBS1_0694	PWY-6317	galactose degradation I (Leloir pathway)
R2APBS1_0694	PWY-7459	kojibiose degradation
R2APBS1_0697	PWY-5392	reductive TCA cycle II
R2APBS1_0697	PWY-5537	pyruvate fermentation to acetate V
R2APBS1_0697	PWY-5538	pyruvate fermentation to acetate VI
R2APBS1_0697	PWY-5690	TCA cycle II (plants and fungi)
R2APBS1_0697	PWY-5913	TCA cycle VI (obligate autotrophs)
R2APBS1_0697	PWY-6728	methylaspartate cycle
R2APBS1_0697	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
R2APBS1_0697	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
R2APBS1_0698	PWY-5392	reductive TCA cycle II
R2APBS1_0698	PWY-5537	pyruvate fermentation to acetate V
R2APBS1_0698	PWY-5538	pyruvate fermentation to acetate VI
R2APBS1_0698	PWY-5690	TCA cycle II (plants and fungi)
R2APBS1_0698	PWY-5913	TCA cycle VI (obligate autotrophs)
R2APBS1_0698	PWY-6728	methylaspartate cycle
R2APBS1_0698	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
R2APBS1_0698	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
R2APBS1_0699	PWY-5381	pyridine nucleotide cycling (plants)
R2APBS1_0699	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
R2APBS1_0722	PWY-6703	preQ<sub>0</sub> biosynthesis
R2APBS1_0723	PWY-6703	preQ<sub>0</sub> biosynthesis
R2APBS1_0734	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
R2APBS1_0736	PWY-6605	adenine and adenosine salvage II
R2APBS1_0736	PWY-6610	adenine and adenosine salvage IV
R2APBS1_0751	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
R2APBS1_0751	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
R2APBS1_0751	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
R2APBS1_0768	PWY-5686	UMP biosynthesis
R2APBS1_0770	PWY-1622	formaldehyde assimilation I (serine pathway)
R2APBS1_0770	PWY-181	photorespiration
R2APBS1_0770	PWY-2161	folate polyglutamylation
R2APBS1_0770	PWY-2201	folate transformations I
R2APBS1_0770	PWY-3661	glycine betaine degradation I
R2APBS1_0770	PWY-3661-1	glycine betaine degradation II (mammalian)
R2APBS1_0770	PWY-3841	folate transformations II
R2APBS1_0770	PWY-5497	purine nucleobases degradation II (anaerobic)
R2APBS1_0771	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
R2APBS1_0771	PWY-7177	UTP and CTP dephosphorylation II
R2APBS1_0771	PWY-7185	UTP and CTP dephosphorylation I
R2APBS1_0776	PWY-6167	flavin biosynthesis II (archaea)
R2APBS1_0776	PWY-6168	flavin biosynthesis III (fungi)
R2APBS1_0776	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
R2APBS1_0777	PWY-6167	flavin biosynthesis II (archaea)
R2APBS1_0777	PWY-6168	flavin biosynthesis III (fungi)
R2APBS1_0777	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
R2APBS1_0779	PWY-6167	flavin biosynthesis II (archaea)
R2APBS1_0779	PWY-6168	flavin biosynthesis III (fungi)
R2APBS1_0781	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
R2APBS1_0781	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
R2APBS1_0781	PWY-6896	thiamin salvage I
R2APBS1_0781	PWY-6897	thiamin salvage II
R2APBS1_0782	PWY-5269	cardiolipin biosynthesis II
R2APBS1_0782	PWY-5668	cardiolipin biosynthesis I
R2APBS1_0792	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
R2APBS1_0801	PWY-1361	benzoyl-CoA degradation I (aerobic)
R2APBS1_0801	PWY-2361	3-oxoadipate degradation
R2APBS1_0801	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
R2APBS1_0835	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
R2APBS1_0835	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
R2APBS1_0837	PWY-6164	3-dehydroquinate biosynthesis I
R2APBS1_0838	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
R2APBS1_0843	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
R2APBS1_0843	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
R2APBS1_0847	PWY-3341	L-proline biosynthesis III
R2APBS1_0847	PWY-4981	L-proline biosynthesis II (from arginine)
R2APBS1_0847	PWY-6344	L-ornithine degradation II (Stickland reaction)
R2APBS1_0855	PWY-5686	UMP biosynthesis
R2APBS1_0893	PWY-7039	phosphatidate metabolism, as a signaling molecule
R2APBS1_0902	PWY-3841	folate transformations II
R2APBS1_0902	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
R2APBS1_0902	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
R2APBS1_0902	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
R2APBS1_0902	PWY-7199	pyrimidine deoxyribonucleosides salvage
R2APBS1_0902	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
R2APBS1_0903	PWY-3841	folate transformations II
R2APBS1_0903	PWY-6614	tetrahydrofolate biosynthesis
R2APBS1_0927	PWY-6556	pyrimidine ribonucleosides salvage II
R2APBS1_0927	PWY-7181	pyrimidine deoxyribonucleosides degradation
R2APBS1_0927	PWY-7193	pyrimidine ribonucleosides salvage I
R2APBS1_0927	PWY-7199	pyrimidine deoxyribonucleosides salvage
R2APBS1_0943	PWY-6785	hydrogen production VIII
R2APBS1_0949	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
R2APBS1_0952	PWY-7560	methylerythritol phosphate pathway II
R2APBS1_1005	PWY-6164	3-dehydroquinate biosynthesis I
R2APBS1_1007	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
R2APBS1_1011	PWY-6482	diphthamide biosynthesis (archaea)
R2APBS1_1011	PWY-7546	diphthamide biosynthesis (eukaryotes)
R2APBS1_1024	PWY-4381	fatty acid biosynthesis initiation I
R2APBS1_1024	PWY-5743	3-hydroxypropanoate cycle
R2APBS1_1024	PWY-5744	glyoxylate assimilation
R2APBS1_1024	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
R2APBS1_1024	PWY-6679	jadomycin biosynthesis
R2APBS1_1024	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
R2APBS1_1032	PWY-5971	palmitate biosynthesis II (bacteria and plants)
R2APBS1_1032	PWY-5973	<i>cis</i>-vaccenate biosynthesis
R2APBS1_1032	PWY-5989	stearate biosynthesis II (bacteria and plants)
R2APBS1_1032	PWY-5994	palmitate biosynthesis I (animals and fungi)
R2APBS1_1032	PWY-6113	superpathway of mycolate biosynthesis
R2APBS1_1032	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
R2APBS1_1032	PWY-6519	8-amino-7-oxononanoate biosynthesis I
R2APBS1_1032	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
R2APBS1_1032	PWYG-321	mycolate biosynthesis
R2APBS1_1036	PWY-7560	methylerythritol phosphate pathway II
R2APBS1_1057	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
R2APBS1_1057	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
R2APBS1_1059	PWY-7183	pyrimidine nucleobases salvage I
R2APBS1_1066	PWY-6700	queuosine biosynthesis
R2APBS1_1067	PWY-6700	queuosine biosynthesis
R2APBS1_1077	PWY-6823	molybdenum cofactor biosynthesis
R2APBS1_1077	PWY-6891	thiazole biosynthesis II (Bacillus)
R2APBS1_1077	PWY-6892	thiazole biosynthesis I (E. coli)
R2APBS1_1077	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
R2APBS1_1079	PWY-6654	phosphopantothenate biosynthesis III
R2APBS1_1110	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
R2APBS1_1137	PWY-5381	pyridine nucleotide cycling (plants)
R2APBS1_1137	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
R2APBS1_1140	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
R2APBS1_1140	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
R2APBS1_1140	PWY-6164	3-dehydroquinate biosynthesis I
R2APBS1_1145	PWY-723	alkylnitronates degradation
R2APBS1_1158	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
R2APBS1_1170	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
R2APBS1_1170	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
R2APBS1_1170	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
R2APBS1_1170	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
R2APBS1_1186	PWY-6829	tRNA methylation (yeast)
R2APBS1_1186	PWY-7285	methylwyosine biosynthesis
R2APBS1_1186	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
R2APBS1_1193	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
R2APBS1_1193	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
R2APBS1_1193	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
R2APBS1_1193	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
R2APBS1_1193	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
R2APBS1_1193	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
R2APBS1_1193	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
R2APBS1_1193	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
R2APBS1_1193	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
R2APBS1_1193	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
R2APBS1_1194	PWY-181	photorespiration
R2APBS1_1196	PWY-5663	tetrahydrobiopterin biosynthesis I
R2APBS1_1196	PWY-5664	tetrahydrobiopterin biosynthesis II
R2APBS1_1196	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
R2APBS1_1196	PWY-6703	preQ<sub>0</sub> biosynthesis
R2APBS1_1196	PWY-6983	tetrahydrobiopterin biosynthesis III
R2APBS1_1196	PWY-7442	drosopterin and aurodrosopterin biosynthesis
R2APBS1_1203	PWY-5686	UMP biosynthesis
R2APBS1_1206	PWY-4983	L-citrulline-nitric oxide cycle
R2APBS1_1206	PWY-4984	urea cycle
R2APBS1_1206	PWY-5	canavanine biosynthesis
R2APBS1_1206	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
R2APBS1_1206	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
R2APBS1_1208	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
R2APBS1_1208	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
R2APBS1_1209	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
R2APBS1_1209	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
R2APBS1_1210	PWY-4983	L-citrulline-nitric oxide cycle
R2APBS1_1210	PWY-4984	urea cycle
R2APBS1_1210	PWY-5	canavanine biosynthesis
R2APBS1_1210	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
R2APBS1_1210	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
R2APBS1_1216	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
R2APBS1_1216	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
R2APBS1_1237	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
R2APBS1_1237	PWY-6167	flavin biosynthesis II (archaea)
R2APBS1_1237	PWY-6168	flavin biosynthesis III (fungi)
R2APBS1_1240	PWY-7560	methylerythritol phosphate pathway II
R2APBS1_1262	PWY-2201	folate transformations I
R2APBS1_1262	PWY-3841	folate transformations II
R2APBS1_1268	PWY-5022	4-aminobutanoate degradation V
R2APBS1_1268	PWY-6728	methylaspartate cycle
R2APBS1_1268	PWY-7126	ethylene biosynthesis IV
R2APBS1_1269	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
R2APBS1_1269	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
R2APBS1_1269	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
R2APBS1_1270	PWY-5381	pyridine nucleotide cycling (plants)
R2APBS1_1270	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
R2APBS1_1270	PWY-6596	adenosine nucleotides degradation I
R2APBS1_1270	PWY-6606	guanosine nucleotides degradation II
R2APBS1_1270	PWY-6607	guanosine nucleotides degradation I
R2APBS1_1270	PWY-6608	guanosine nucleotides degradation III
R2APBS1_1270	PWY-7185	UTP and CTP dephosphorylation I
R2APBS1_1326	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
R2APBS1_1338	PWY-5669	phosphatidylethanolamine biosynthesis I
R2APBS1_1341	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
R2APBS1_1343	PWY-2941	L-lysine biosynthesis II
R2APBS1_1343	PWY-2942	L-lysine biosynthesis III
R2APBS1_1343	PWY-5097	L-lysine biosynthesis VI
R2APBS1_1343	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
R2APBS1_1343	PWY-6559	spermidine biosynthesis II
R2APBS1_1343	PWY-6562	norspermidine biosynthesis
R2APBS1_1343	PWY-7153	grixazone biosynthesis
R2APBS1_1343	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
R2APBS1_1351	PWY-4381	fatty acid biosynthesis initiation I
R2APBS1_1351	PWY-5743	3-hydroxypropanoate cycle
R2APBS1_1351	PWY-5744	glyoxylate assimilation
R2APBS1_1351	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
R2APBS1_1351	PWY-6679	jadomycin biosynthesis
R2APBS1_1351	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
R2APBS1_1356	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
R2APBS1_1376	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
R2APBS1_1376	PWY-5389	3-methylthiopropanoate biosynthesis
R2APBS1_1377	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
R2APBS1_1382	PWY-5647	2-nitrobenzoate degradation I
R2APBS1_1382	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
R2APBS1_1382	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
R2APBS1_1382	PWY-6505	L-tryptophan degradation XII (Geobacillus)
R2APBS1_1387	PWY-7153	grixazone biosynthesis
R2APBS1_1416	PWY-2161	folate polyglutamylation
R2APBS1_1419	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
R2APBS1_1419	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
R2APBS1_1419	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
R2APBS1_1419	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
R2APBS1_1423	PWY-3162	L-tryptophan degradation V (side chain pathway)
R2APBS1_1423	PWY-5057	L-valine degradation II
R2APBS1_1423	PWY-5076	L-leucine degradation III
R2APBS1_1423	PWY-5078	L-isoleucine degradation II
R2APBS1_1423	PWY-5079	L-phenylalanine degradation III
R2APBS1_1423	PWY-5082	L-methionine degradation III
R2APBS1_1423	PWY-5480	pyruvate fermentation to ethanol I
R2APBS1_1423	PWY-5486	pyruvate fermentation to ethanol II
R2APBS1_1423	PWY-5751	phenylethanol biosynthesis
R2APBS1_1423	PWY-6028	acetoin degradation
R2APBS1_1423	PWY-6313	serotonin degradation
R2APBS1_1423	PWY-6333	acetaldehyde biosynthesis I
R2APBS1_1423	PWY-6342	noradrenaline and adrenaline degradation
R2APBS1_1423	PWY-6587	pyruvate fermentation to ethanol III
R2APBS1_1423	PWY-6802	salidroside biosynthesis
R2APBS1_1423	PWY-6871	3-methylbutanol biosynthesis
R2APBS1_1423	PWY-7013	L-1,2-propanediol degradation
R2APBS1_1423	PWY-7111	pyruvate fermentation to isobutanol (engineered)
R2APBS1_1423	PWY-7118	chitin degradation to ethanol
R2APBS1_1423	PWY-7396	butanol and isobutanol biosynthesis (engineered)
R2APBS1_1423	PWY-7557	dehydrodiconiferyl alcohol degradation
R2APBS1_1446	PWY-4381	fatty acid biosynthesis initiation I
R2APBS1_1447	PWY-4381	fatty acid biosynthesis initiation I
R2APBS1_1447	PWY-6799	fatty acid biosynthesis (plant mitochondria)
R2APBS1_1447	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
R2APBS1_1448	PWY-5367	petroselinate biosynthesis
R2APBS1_1448	PWY-5971	palmitate biosynthesis II (bacteria and plants)
R2APBS1_1448	PWY-5973	<i>cis</i>-vaccenate biosynthesis
R2APBS1_1448	PWY-5989	stearate biosynthesis II (bacteria and plants)
R2APBS1_1448	PWY-5994	palmitate biosynthesis I (animals and fungi)
R2APBS1_1448	PWY-6113	superpathway of mycolate biosynthesis
R2APBS1_1448	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
R2APBS1_1448	PWY-6519	8-amino-7-oxononanoate biosynthesis I
R2APBS1_1448	PWY-6951	R2APBS1_1448|R2APBS1_1448|REF_jgi:R2APBS1_1448|GeneID:14748810
R2APBS1_1448	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
R2APBS1_1448	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
R2APBS1_1448	PWYG-321	mycolate biosynthesis
R2APBS1_1451	PWY-5958	acridone alkaloid biosynthesis
R2APBS1_1451	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
R2APBS1_1451	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
R2APBS1_1452	PWY-6543	4-aminobenzoate biosynthesis
R2APBS1_1452	PWY-6722	candicidin biosynthesis
R2APBS1_1454	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
R2APBS1_1454	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
R2APBS1_1454	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
R2APBS1_1454	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
R2APBS1_1454	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
R2APBS1_1454	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
R2APBS1_1483	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
R2APBS1_1483	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
R2APBS1_1493	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
R2APBS1_1493	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
R2APBS1_1494	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
R2APBS1_1495	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
R2APBS1_1499	PWY-6683	sulfate reduction III (assimilatory)
R2APBS1_1500	PWY-6683	sulfate reduction III (assimilatory)
R2APBS1_1503	PWY-5194	siroheme biosynthesis
R2APBS1_1503	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
R2APBS1_1504	PWY-6936	seleno-amino acid biosynthesis
R2APBS1_1507	PWY-6123	inosine-5'-phosphate biosynthesis I
R2APBS1_1507	PWY-6124	inosine-5'-phosphate biosynthesis II
R2APBS1_1507	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
R2APBS1_1507	PWY-7234	inosine-5'-phosphate biosynthesis III
R2APBS1_1508	PWY-5392	reductive TCA cycle II
R2APBS1_1508	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
R2APBS1_1508	PWY-5690	TCA cycle II (plants and fungi)
R2APBS1_1508	PWY-5913	TCA cycle VI (obligate autotrophs)
R2APBS1_1508	PWY-6728	methylaspartate cycle
R2APBS1_1508	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
R2APBS1_1508	PWY-7254	TCA cycle VII (acetate-producers)
R2APBS1_1508	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
R2APBS1_1521	PWY-4202	arsenate detoxification I (glutaredoxin)
R2APBS1_1521	PWY-4621	arsenate detoxification II (glutaredoxin)
R2APBS1_1541	PWY-1622	formaldehyde assimilation I (serine pathway)
R2APBS1_1541	PWY-5392	reductive TCA cycle II
R2APBS1_1541	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
R2APBS1_1541	PWY-5690	TCA cycle II (plants and fungi)
R2APBS1_1541	PWY-5913	TCA cycle VI (obligate autotrophs)
R2APBS1_1541	PWY-6728	methylaspartate cycle
R2APBS1_1541	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
R2APBS1_1541	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
R2APBS1_1541	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
R2APBS1_1542	PWY-3941	&beta;-alanine biosynthesis II
R2APBS1_1542	PWY-5104	L-isoleucine biosynthesis IV
R2APBS1_1542	PWY-5747	2-methylcitrate cycle II
R2APBS1_1546	PWY-5747	2-methylcitrate cycle II
R2APBS1_1556	PWY-7378	aminopropanol phosphate biosynthesis II
R2APBS1_1559	PWY-2781	<i>cis</i>-zeatin biosynthesis
R2APBS1_1565	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
R2APBS1_1569	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
R2APBS1_1614	PWY-3461	L-tyrosine biosynthesis II
R2APBS1_1614	PWY-3462	L-phenylalanine biosynthesis II
R2APBS1_1614	PWY-6120	L-tyrosine biosynthesis III
R2APBS1_1614	PWY-6627	salinosporamide A biosynthesis
R2APBS1_1614	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
R2APBS1_1615	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
R2APBS1_1616	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
R2APBS1_1616	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
R2APBS1_1618	PWY-5269	cardiolipin biosynthesis II
R2APBS1_1618	PWY-5668	cardiolipin biosynthesis I
R2APBS1_1637	PWY-43	putrescine biosynthesis II
R2APBS1_1692	PWY-6834	spermidine biosynthesis III
R2APBS1_1694	PWY-3781	aerobic respiration I (cytochrome c)
R2APBS1_1694	PWY-4521	arsenite oxidation I (respiratory)
R2APBS1_1694	PWY-6692	Fe(II) oxidation
R2APBS1_1694	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
R2APBS1_1734	PWY-4202	arsenate detoxification I (glutaredoxin)
R2APBS1_1734	PWY-4621	arsenate detoxification II (glutaredoxin)
R2APBS1_1768	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
R2APBS1_1769	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
R2APBS1_1769	PWY-6596	adenosine nucleotides degradation I
R2APBS1_1769	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
R2APBS1_1770	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
R2APBS1_1770	PWY-2201	folate transformations I
R2APBS1_1770	PWY-3841	folate transformations II
R2APBS1_1770	PWY-5030	L-histidine degradation III
R2APBS1_1770	PWY-5497	purine nucleobases degradation II (anaerobic)
R2APBS1_1770	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
R2APBS1_1777	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
R2APBS1_1777	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
R2APBS1_1777	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
R2APBS1_1777	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
R2APBS1_1777	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
R2APBS1_1777	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
R2APBS1_1777	PWY-7205	CMP phosphorylation
R2APBS1_1777	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
R2APBS1_1777	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
R2APBS1_1777	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
R2APBS1_1777	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
R2APBS1_1777	PWY-7224	purine deoxyribonucleosides salvage
R2APBS1_1777	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
R2APBS1_1777	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
R2APBS1_1779	PWY-1361	benzoyl-CoA degradation I (aerobic)
R2APBS1_1779	PWY-5109	2-methylbutanoate biosynthesis
R2APBS1_1779	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
R2APBS1_1779	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
R2APBS1_1779	PWY-5177	glutaryl-CoA degradation
R2APBS1_1779	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
R2APBS1_1779	PWY-6435	4-hydroxybenzoate biosynthesis V
R2APBS1_1779	PWY-6583	pyruvate fermentation to butanol I
R2APBS1_1779	PWY-6863	pyruvate fermentation to hexanol
R2APBS1_1779	PWY-6883	pyruvate fermentation to butanol II
R2APBS1_1779	PWY-6944	androstenedione degradation
R2APBS1_1779	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
R2APBS1_1779	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
R2APBS1_1779	PWY-7007	methyl ketone biosynthesis
R2APBS1_1779	PWY-7046	4-coumarate degradation (anaerobic)
R2APBS1_1779	PWY-7094	fatty acid salvage
R2APBS1_1779	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
R2APBS1_1779	PWY-735	jasmonic acid biosynthesis
R2APBS1_1779	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
R2APBS1_1805	PWY-3801	sucrose degradation II (sucrose synthase)
R2APBS1_1805	PWY-6527	stachyose degradation
R2APBS1_1805	PWY-6981	chitin biosynthesis
R2APBS1_1805	PWY-7238	sucrose biosynthesis II
R2APBS1_1805	PWY-7343	UDP-glucose biosynthesis
R2APBS1_1807	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
R2APBS1_1807	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
R2APBS1_1807	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
R2APBS1_1812	PWY-7205	CMP phosphorylation
R2APBS1_1818	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
R2APBS1_1818	PWY-5686	UMP biosynthesis
R2APBS1_1818	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
R2APBS1_1819	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
R2APBS1_1819	PWY-5686	UMP biosynthesis
R2APBS1_1819	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
R2APBS1_1821	PWY-2941	L-lysine biosynthesis II
R2APBS1_1821	PWY-2942	L-lysine biosynthesis III
R2APBS1_1821	PWY-5097	L-lysine biosynthesis VI
R2APBS1_1838	PWY-7158	L-phenylalanine degradation V
R2APBS1_1884	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
R2APBS1_1902	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
R2APBS1_1902	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
R2APBS1_1902	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
R2APBS1_1902	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
R2APBS1_1902	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
R2APBS1_1902	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
R2APBS1_1902	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
R2APBS1_1902	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
R2APBS1_1903	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
R2APBS1_1903	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
R2APBS1_1903	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
R2APBS1_1903	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
R2APBS1_1903	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
R2APBS1_1903	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
R2APBS1_1903	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
R2APBS1_1903	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
R2APBS1_2129	PWY-1042	glycolysis IV (plant cytosol)
R2APBS1_2129	PWY-5484	glycolysis II (from fructose 6-phosphate)
R2APBS1_2129	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
R2APBS1_2129	PWY-7003	glycerol degradation to butanol
R2APBS1_2133	PWY-6749	CMP-legionaminate biosynthesis I
R2APBS1_2134	PWY-6614	tetrahydrofolate biosynthesis
R2APBS1_2145	PWY-1281	sulfoacetaldehyde degradation I
R2APBS1_2145	PWY-5482	pyruvate fermentation to acetate II
R2APBS1_2145	PWY-5485	pyruvate fermentation to acetate IV
R2APBS1_2145	PWY-5497	purine nucleobases degradation II (anaerobic)
R2APBS1_2145	PWY-6637	sulfolactate degradation II
R2APBS1_2146	PWY-5482	pyruvate fermentation to acetate II
R2APBS1_2146	PWY-5485	pyruvate fermentation to acetate IV
R2APBS1_2146	PWY-5497	purine nucleobases degradation II (anaerobic)
R2APBS1_2150	PWY-3821	galactose degradation III
R2APBS1_2150	PWY-6317	galactose degradation I (Leloir pathway)
R2APBS1_2150	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
R2APBS1_2150	PWY-6527	stachyose degradation
R2APBS1_2150	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
R2APBS1_2150	PWY-7344	UDP-D-galactose biosynthesis
R2APBS1_2164	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
R2APBS1_2183	PWY-7560	methylerythritol phosphate pathway II
R2APBS1_2184	PWY-3781	aerobic respiration I (cytochrome c)
R2APBS1_2184	PWY-4521	arsenite oxidation I (respiratory)
R2APBS1_2184	PWY-6692	Fe(II) oxidation
R2APBS1_2184	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
R2APBS1_2185	PWY-3781	aerobic respiration I (cytochrome c)
R2APBS1_2185	PWY-4521	arsenite oxidation I (respiratory)
R2APBS1_2185	PWY-6692	Fe(II) oxidation
R2APBS1_2185	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
R2APBS1_2226	PWY-6902	chitin degradation II
R2APBS1_2243	PWY-1361	benzoyl-CoA degradation I (aerobic)
R2APBS1_2243	PWY-5109	2-methylbutanoate biosynthesis
R2APBS1_2243	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
R2APBS1_2243	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
R2APBS1_2243	PWY-5177	glutaryl-CoA degradation
R2APBS1_2243	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
R2APBS1_2243	PWY-6435	4-hydroxybenzoate biosynthesis V
R2APBS1_2243	PWY-6583	pyruvate fermentation to butanol I
R2APBS1_2243	PWY-6863	pyruvate fermentation to hexanol
R2APBS1_2243	PWY-6883	pyruvate fermentation to butanol II
R2APBS1_2243	PWY-6944	androstenedione degradation
R2APBS1_2243	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
R2APBS1_2243	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
R2APBS1_2243	PWY-7007	methyl ketone biosynthesis
R2APBS1_2243	PWY-7046	4-coumarate degradation (anaerobic)
R2APBS1_2243	PWY-7094	fatty acid salvage
R2APBS1_2243	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
R2APBS1_2243	PWY-735	jasmonic acid biosynthesis
R2APBS1_2243	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
R2APBS1_2246	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
R2APBS1_2254	PWY-5484	glycolysis II (from fructose 6-phosphate)
R2APBS1_2260	PWY-5386	methylglyoxal degradation I
R2APBS1_2283	PWY-5381	pyridine nucleotide cycling (plants)
R2APBS1_2283	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
R2APBS1_2283	PWY-6596	adenosine nucleotides degradation I
R2APBS1_2283	PWY-6606	guanosine nucleotides degradation II
R2APBS1_2283	PWY-6607	guanosine nucleotides degradation I
R2APBS1_2283	PWY-6608	guanosine nucleotides degradation III
R2APBS1_2283	PWY-7185	UTP and CTP dephosphorylation I
R2APBS1_2287	PWY-7560	methylerythritol phosphate pathway II
R2APBS1_2288	PWY-7560	methylerythritol phosphate pathway II
R2APBS1_2290	PWY-1042	glycolysis IV (plant cytosol)
R2APBS1_2290	PWY-1622	formaldehyde assimilation I (serine pathway)
R2APBS1_2290	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
R2APBS1_2290	PWY-5484	glycolysis II (from fructose 6-phosphate)
R2APBS1_2290	PWY-5723	Rubisco shunt
R2APBS1_2290	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
R2APBS1_2290	PWY-6886	1-butanol autotrophic biosynthesis
R2APBS1_2290	PWY-6901	superpathway of glucose and xylose degradation
R2APBS1_2290	PWY-7003	glycerol degradation to butanol
R2APBS1_2290	PWY-7124	ethylene biosynthesis V (engineered)
R2APBS1_2290	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
R2APBS1_2291	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
R2APBS1_2291	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
R2APBS1_2292	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
R2APBS1_2292	PWY-7177	UTP and CTP dephosphorylation II
R2APBS1_2292	PWY-7185	UTP and CTP dephosphorylation I
R2APBS1_2297	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
R2APBS1_2297	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
R2APBS1_2297	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
R2APBS1_2300	PWY-3781	aerobic respiration I (cytochrome c)
R2APBS1_2300	PWY-4521	arsenite oxidation I (respiratory)
R2APBS1_2300	PWY-6692	Fe(II) oxidation
R2APBS1_2300	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
R2APBS1_2301	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
R2APBS1_2301	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
R2APBS1_2315	PWY-2582	brassinosteroid biosynthesis II
R2APBS1_2315	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
R2APBS1_2315	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
R2APBS1_2315	PWY-6948	sitosterol degradation to androstenedione
R2APBS1_2315	PWY-699	brassinosteroid biosynthesis I
R2APBS1_2315	PWY-7299	progesterone biosynthesis
R2APBS1_2325	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
R2APBS1_2346	PWY-5028	L-histidine degradation II
R2APBS1_2346	PWY-5030	L-histidine degradation III
R2APBS1_2364	PWY-5028	L-histidine degradation II
R2APBS1_2364	PWY-5030	L-histidine degradation III
R2APBS1_2374	PWY-3781	aerobic respiration I (cytochrome c)
R2APBS1_2374	PWY-4302	aerobic respiration III (alternative oxidase pathway)
R2APBS1_2374	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
R2APBS1_2374	PWY-5690	TCA cycle II (plants and fungi)
R2APBS1_2374	PWY-6728	methylaspartate cycle
R2APBS1_2374	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
R2APBS1_2374	PWY-7254	TCA cycle VII (acetate-producers)
R2APBS1_2374	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
R2APBS1_2375	PWY-3781	aerobic respiration I (cytochrome c)
R2APBS1_2375	PWY-4302	aerobic respiration III (alternative oxidase pathway)
R2APBS1_2375	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
R2APBS1_2375	PWY-5690	TCA cycle II (plants and fungi)
R2APBS1_2375	PWY-6728	methylaspartate cycle
R2APBS1_2375	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
R2APBS1_2375	PWY-7254	TCA cycle VII (acetate-producers)
R2APBS1_2375	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
R2APBS1_2389	PWY-5676	acetyl-CoA fermentation to butanoate II
R2APBS1_2389	PWY-5741	ethylmalonyl-CoA pathway
R2APBS1_2389	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
R2APBS1_2390	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
R2APBS1_2390	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
R2APBS1_2401	PWY-5344	L-homocysteine biosynthesis
R2APBS1_2402	PWY-5331	taurine biosynthesis
R2APBS1_2417	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
R2APBS1_2417	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
R2APBS1_2418	PWY-5686	UMP biosynthesis
R2APBS1_2483	PWY-3781	aerobic respiration I (cytochrome c)
R2APBS1_2483	PWY-4521	arsenite oxidation I (respiratory)
R2APBS1_2483	PWY-6692	Fe(II) oxidation
R2APBS1_2483	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
R2APBS1_2525	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
R2APBS1_2525	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
R2APBS1_2537	PWY-4261	glycerol degradation I
R2APBS1_2538	PWY-4261	glycerol degradation I
R2APBS1_2538	PWY-6118	glycerol-3-phosphate shuttle
R2APBS1_2538	PWY-6952	glycerophosphodiester degradation
R2APBS1_2539	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
R2APBS1_2539	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
R2APBS1_2554	PWY-5743	3-hydroxypropanoate cycle
R2APBS1_2554	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
R2APBS1_2554	PWY-6728	methylaspartate cycle
R2APBS1_2554	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
R2APBS1_2565	PWY-4381	fatty acid biosynthesis initiation I
R2APBS1_2565	PWY-5743	3-hydroxypropanoate cycle
R2APBS1_2565	PWY-5744	glyoxylate assimilation
R2APBS1_2565	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
R2APBS1_2565	PWY-6679	jadomycin biosynthesis
R2APBS1_2565	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
R2APBS1_2588	PWY-6938	NADH repair
R2APBS1_2590	PWY-5155	&beta;-alanine biosynthesis III
R2APBS1_2592	PWY-6654	phosphopantothenate biosynthesis III
R2APBS1_2593	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
R2APBS1_2593	PWY-6148	tetrahydromethanopterin biosynthesis
R2APBS1_2593	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
R2APBS1_2593	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
R2APBS1_2598	PWY-2941	L-lysine biosynthesis II
R2APBS1_2598	PWY-2942	L-lysine biosynthesis III
R2APBS1_2598	PWY-5097	L-lysine biosynthesis VI
R2APBS1_2636	PWY-5506	methanol oxidation to formaldehyde IV
R2APBS1_2658	PWY-5676	acetyl-CoA fermentation to butanoate II
R2APBS1_2658	PWY-5741	ethylmalonyl-CoA pathway
R2APBS1_2658	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
R2APBS1_2671	PWY-6803	phosphatidylcholine acyl editing
R2APBS1_2671	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
R2APBS1_2671	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
R2APBS1_2671	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
R2APBS1_2677	PWY-5381	pyridine nucleotide cycling (plants)
R2APBS1_2764	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
R2APBS1_2764	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
R2APBS1_2765	PWY-6502	oxidized GTP and dGTP detoxification
R2APBS1_2768	PWY-101	photosynthesis light reactions
R2APBS1_2768	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
R2APBS1_2771	PWY-6748	nitrate reduction VII (denitrification)
R2APBS1_2771	PWY-7084	nitrifier denitrification
R2APBS1_2875	PWY-3781	aerobic respiration I (cytochrome c)
R2APBS1_2875	PWY-4521	arsenite oxidation I (respiratory)
R2APBS1_2875	PWY-6692	Fe(II) oxidation
R2APBS1_2875	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
R2APBS1_2881	PWY-3781	aerobic respiration I (cytochrome c)
R2APBS1_2881	PWY-4521	arsenite oxidation I (respiratory)
R2APBS1_2881	PWY-6692	Fe(II) oxidation
R2APBS1_2881	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
R2APBS1_2885	PWY-5667	CDP-diacylglycerol biosynthesis I
R2APBS1_2885	PWY-5981	CDP-diacylglycerol biosynthesis III
R2APBS1_2885	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
R2APBS1_2901	PWY-6823	molybdenum cofactor biosynthesis
R2APBS1_2903	PWY-6823	molybdenum cofactor biosynthesis
R2APBS1_2905	PWY-6823	molybdenum cofactor biosynthesis
R2APBS1_2908	PWY-4202	arsenate detoxification I (glutaredoxin)
R2APBS1_2908	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
R2APBS1_2908	PWY-6608	guanosine nucleotides degradation III
R2APBS1_2908	PWY-6609	adenine and adenosine salvage III
R2APBS1_2908	PWY-6611	adenine and adenosine salvage V
R2APBS1_2908	PWY-6620	guanine and guanosine salvage
R2APBS1_2908	PWY-6627	salinosporamide A biosynthesis
R2APBS1_2908	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
R2APBS1_2908	PWY-7179	purine deoxyribonucleosides degradation I
R2APBS1_2908	PWY-7179-1	purine deoxyribonucleosides degradation
R2APBS1_2909	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
R2APBS1_2910	PWY-7181	pyrimidine deoxyribonucleosides degradation
R2APBS1_2911	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
R2APBS1_2914	PWY-5971	palmitate biosynthesis II (bacteria and plants)
R2APBS1_2914	PWY-5973	<i>cis</i>-vaccenate biosynthesis
R2APBS1_2914	PWY-5989	stearate biosynthesis II (bacteria and plants)
R2APBS1_2914	PWY-5994	palmitate biosynthesis I (animals and fungi)
R2APBS1_2914	PWY-6113	superpathway of mycolate biosynthesis
R2APBS1_2914	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
R2APBS1_2914	PWY-6519	8-amino-7-oxononanoate biosynthesis I
R2APBS1_2914	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
R2APBS1_2914	PWYG-321	mycolate biosynthesis
R2APBS1_2916	PWY-5316	nicotine biosynthesis
R2APBS1_2916	PWY-7342	superpathway of nicotine biosynthesis
R2APBS1_2921	PWY-6523	nitrite-dependent anaerobic methane oxidation
R2APBS1_2921	PWY-6748	nitrate reduction VII (denitrification)
R2APBS1_2921	PWY-7084	nitrifier denitrification
R2APBS1_2932	PWY-6854	ethylene biosynthesis III (microbes)
R2APBS1_2934	PWY-6123	inosine-5'-phosphate biosynthesis I
R2APBS1_2934	PWY-7234	inosine-5'-phosphate biosynthesis III
R2APBS1_2937	PWY-5316	nicotine biosynthesis
R2APBS1_2937	PWY-5381	pyridine nucleotide cycling (plants)
R2APBS1_2937	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
R2APBS1_2937	PWY-7342	superpathway of nicotine biosynthesis
R2APBS1_2943	PWY-3781	aerobic respiration I (cytochrome c)
R2APBS1_2943	PWY-6692	Fe(II) oxidation
R2APBS1_2943	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
R2APBS1_2943	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
R2APBS1_2994	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
R2APBS1_3025	PWY-4041	&gamma;-glutamyl cycle
R2APBS1_3025	PWY-5826	hypoglycin biosynthesis
R2APBS1_3055	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
R2APBS1_3060	PWY-5669	phosphatidylethanolamine biosynthesis I
R2APBS1_3098	PWY-842	starch degradation I
R2APBS1_3106	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
R2APBS1_3119	PWY-2301	<i>myo</i>-inositol biosynthesis
R2APBS1_3119	PWY-4702	phytate degradation I
R2APBS1_3119	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
R2APBS1_3123	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
R2APBS1_3123	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
R2APBS1_3123	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
R2APBS1_3124	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
R2APBS1_3124	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
R2APBS1_3130	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
R2APBS1_3130	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
R2APBS1_3133	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
R2APBS1_3133	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
R2APBS1_3165	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
R2APBS1_3165	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
R2APBS1_3165	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
R2APBS1_3165	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
R2APBS1_3189	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
R2APBS1_3189	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
R2APBS1_3192	PWY-2941	L-lysine biosynthesis II
R2APBS1_3192	PWY-2942	L-lysine biosynthesis III
R2APBS1_3192	PWY-5097	L-lysine biosynthesis VI
R2APBS1_3192	PWY-6559	spermidine biosynthesis II
R2APBS1_3192	PWY-6562	norspermidine biosynthesis
R2APBS1_3192	PWY-7153	grixazone biosynthesis
R2APBS1_3193	PWY-5392	reductive TCA cycle II
R2APBS1_3193	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
R2APBS1_3193	PWY-5690	TCA cycle II (plants and fungi)
R2APBS1_3193	PWY-5913	TCA cycle VI (obligate autotrophs)
R2APBS1_3193	PWY-6728	methylaspartate cycle
R2APBS1_3193	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
R2APBS1_3193	PWY-7254	TCA cycle VII (acetate-producers)
R2APBS1_3193	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
R2APBS1_3222	PWY-6424	R2APBS1_3222|R2APBS1_3222|REF_jgi:R2APBS1_3222|GeneID:14750582
R2APBS1_3232	PWY-6891	thiazole biosynthesis II (Bacillus)
R2APBS1_3232	PWY-6892	thiazole biosynthesis I (E. coli)
R2APBS1_3232	PWY-7560	methylerythritol phosphate pathway II
R2APBS1_3242	PWY-5988	wound-induced proteolysis I
R2APBS1_3242	PWY-6018	seed germination protein turnover
R2APBS1_3251	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
R2APBS1_3251	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
R2APBS1_3251	PWY-6268	adenosylcobalamin salvage from cobalamin
R2APBS1_3251	PWY-6269	adenosylcobalamin salvage from cobinamide II
R2APBS1_3267	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
R2APBS1_3267	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
R2APBS1_3268	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
R2APBS1_3268	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
R2APBS1_3269	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
R2APBS1_3269	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
R2APBS1_3269	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
R2APBS1_3269	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
R2APBS1_3271	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
R2APBS1_3271	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
R2APBS1_3271	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
R2APBS1_3272	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
R2APBS1_3272	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
R2APBS1_3282	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
R2APBS1_3282	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
R2APBS1_3288	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
R2APBS1_3288	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
R2APBS1_3288	PWY-6936	seleno-amino acid biosynthesis
R2APBS1_3288	PWY-702	L-methionine biosynthesis II
R2APBS1_3289	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
R2APBS1_3289	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
R2APBS1_3293	PWY-1622	formaldehyde assimilation I (serine pathway)
R2APBS1_3293	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
R2APBS1_3293	PWY-5913	TCA cycle VI (obligate autotrophs)
R2APBS1_3293	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
R2APBS1_3293	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
R2APBS1_3293	PWY-6549	L-glutamine biosynthesis III
R2APBS1_3293	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
R2APBS1_3293	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
R2APBS1_3293	PWY-7124	ethylene biosynthesis V (engineered)
R2APBS1_3295	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
R2APBS1_3303	PWY-2201	folate transformations I
R2APBS1_3303	PWY-3841	folate transformations II
R2APBS1_3305	PWY-5057	L-valine degradation II
R2APBS1_3305	PWY-5076	L-leucine degradation III
R2APBS1_3305	PWY-5078	L-isoleucine degradation II
R2APBS1_3305	PWY-5101	L-isoleucine biosynthesis II
R2APBS1_3305	PWY-5103	L-isoleucine biosynthesis III
R2APBS1_3305	PWY-5104	L-isoleucine biosynthesis IV
R2APBS1_3305	PWY-5108	L-isoleucine biosynthesis V
R2APBS1_3360	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
R2APBS1_3363	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
R2APBS1_3371	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
R2APBS1_3378	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
R2APBS1_3378	PWY-5723	Rubisco shunt
R2APBS1_3391	PWY-6834	spermidine biosynthesis III
R2APBS1_3397	PWY-5958	acridone alkaloid biosynthesis
R2APBS1_3397	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
R2APBS1_3397	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
R2APBS1_3412	PWY-2941	L-lysine biosynthesis II
R2APBS1_3412	PWY-2942	L-lysine biosynthesis III
R2APBS1_3412	PWY-5097	L-lysine biosynthesis VI
R2APBS1_3413	PWY-7533	gliotoxin biosynthesis
R2APBS1_3415	PWY-6454	vancomycin resistance I
R2APBS1_3415	PWY-6455	vancomycin resistance II
R2APBS1_3424	PWY-6527	stachyose degradation
R2APBS1_3429	PWY-5958	acridone alkaloid biosynthesis
R2APBS1_3429	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
R2APBS1_3429	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
R2APBS1_3436	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
R2APBS1_3436	PWY-5723	Rubisco shunt
R2APBS1_3439	PWY-6123	inosine-5'-phosphate biosynthesis I
R2APBS1_3439	PWY-6124	inosine-5'-phosphate biosynthesis II
R2APBS1_3439	PWY-7234	inosine-5'-phosphate biosynthesis III
R2APBS1_3453	PWY-2941	L-lysine biosynthesis II
R2APBS1_3453	PWY-2942	L-lysine biosynthesis III
R2APBS1_3453	PWY-5097	L-lysine biosynthesis VI
R2APBS1_3454	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
R2APBS1_3454	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
R2APBS1_3479	PWY-4981	L-proline biosynthesis II (from arginine)
R2APBS1_3483	PWY-6891	thiazole biosynthesis II (Bacillus)
R2APBS1_3483	PWY-6892	thiazole biosynthesis I (E. coli)
R2APBS1_3483	PWY-7560	methylerythritol phosphate pathway II
R2APBS1_3484	PWY-1281	sulfoacetaldehyde degradation I
R2APBS1_3484	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
R2APBS1_3484	PWY-5482	pyruvate fermentation to acetate II
R2APBS1_3484	PWY-5485	pyruvate fermentation to acetate IV
R2APBS1_3484	PWY-5497	purine nucleobases degradation II (anaerobic)
R2APBS1_3484	PWY-6637	sulfolactate degradation II
R2APBS1_3484	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
R2APBS1_3536	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
R2APBS1_3537	PWY-6840	homoglutathione biosynthesis
R2APBS1_3537	PWY-7255	ergothioneine biosynthesis I (bacteria)
R2APBS1_3538	PWY-5686	UMP biosynthesis
R2APBS1_3540	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
R2APBS1_3540	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
R2APBS1_3541	PWY-2723	trehalose degradation V
R2APBS1_3541	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
R2APBS1_3541	PWY-5661	GDP-glucose biosynthesis
R2APBS1_3541	PWY-7238	sucrose biosynthesis II
R2APBS1_3541	PWY-7385	1,3-propanediol biosynthesis (engineered)
R2APBS1_3546	PWY-5667	CDP-diacylglycerol biosynthesis I
R2APBS1_3546	PWY-5981	CDP-diacylglycerol biosynthesis III
R2APBS1_3557	PWY-7199	pyrimidine deoxyribonucleosides salvage
R2APBS1_3563	PWY-5667	CDP-diacylglycerol biosynthesis I
R2APBS1_3563	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
R2APBS1_3565	PWY-5839	menaquinol-7 biosynthesis
R2APBS1_3565	PWY-5844	menaquinol-9 biosynthesis
R2APBS1_3565	PWY-5849	menaquinol-6 biosynthesis
R2APBS1_3565	PWY-5890	menaquinol-10 biosynthesis
R2APBS1_3565	PWY-5891	menaquinol-11 biosynthesis
R2APBS1_3565	PWY-5892	menaquinol-12 biosynthesis
R2APBS1_3565	PWY-5895	menaquinol-13 biosynthesis
R2APBS1_3581	PWY-5913	TCA cycle VI (obligate autotrophs)
R2APBS1_3581	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
R2APBS1_3581	PWY-6638	sulfolactate degradation III
R2APBS1_3581	PWY-6642	(<i>R</i>)-cysteate degradation
R2APBS1_3581	PWY-6643	coenzyme M biosynthesis II
R2APBS1_3581	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
R2APBS1_3581	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
R2APBS1_3581	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
R2APBS1_3585	PWY-5269	cardiolipin biosynthesis II
R2APBS1_3585	PWY-5668	cardiolipin biosynthesis I
R2APBS1_3600	PWY-6728	methylaspartate cycle
R2APBS1_3600	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
R2APBS1_3600	PWY-7118	chitin degradation to ethanol
R2APBS1_3600	PWY-7294	xylose degradation IV
R2APBS1_3600	PWY-7295	L-arabinose degradation IV
R2APBS1_3601	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
R2APBS1_3606	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
R2APBS1_3606	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
R2APBS1_3606	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
R2APBS1_3606	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
R2APBS1_3606	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
R2APBS1_3606	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
R2APBS1_3606	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
R2APBS1_3606	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
R2APBS1_3608	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
R2APBS1_3608	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
R2APBS1_3608	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
R2APBS1_3608	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
R2APBS1_3608	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
R2APBS1_3608	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
R2APBS1_3608	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
R2APBS1_3608	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
R2APBS1_3616	PWY-6700	queuosine biosynthesis
R2APBS1_3632	PWY-5491	diethylphosphate degradation
R2APBS1_3640	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
R2APBS1_3640	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
R2APBS1_3640	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
R2APBS1_3640	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
R2APBS1_3640	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
R2APBS1_3640	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
R2APBS1_3640	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
R2APBS1_3640	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
R2APBS1_3640	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
R2APBS1_3640	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
R2APBS1_3642	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
R2APBS1_3642	PWY-6153	autoinducer AI-2 biosynthesis I
R2APBS1_3642	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
R2APBS1_3648	PWY-702	L-methionine biosynthesis II
R2APBS1_3651	PWY-6871	3-methylbutanol biosynthesis
R2APBS1_3652	PWY-5057	L-valine degradation II
R2APBS1_3652	PWY-5076	L-leucine degradation III
R2APBS1_3652	PWY-5078	L-isoleucine degradation II
R2APBS1_3652	PWY-5101	L-isoleucine biosynthesis II
R2APBS1_3652	PWY-5103	L-isoleucine biosynthesis III
R2APBS1_3652	PWY-5104	L-isoleucine biosynthesis IV
R2APBS1_3652	PWY-5108	L-isoleucine biosynthesis V
R2APBS1_3655	PWY-7396	butanol and isobutanol biosynthesis (engineered)
R2APBS1_3656	PWY-5101	L-isoleucine biosynthesis II
R2APBS1_3656	PWY-5103	L-isoleucine biosynthesis III
R2APBS1_3656	PWY-5104	L-isoleucine biosynthesis IV
R2APBS1_3656	PWY-7111	pyruvate fermentation to isobutanol (engineered)
R2APBS1_3657	PWY-5101	L-isoleucine biosynthesis II
R2APBS1_3657	PWY-5103	L-isoleucine biosynthesis III
R2APBS1_3657	PWY-5104	L-isoleucine biosynthesis IV
R2APBS1_3657	PWY-7111	pyruvate fermentation to isobutanol (engineered)
R2APBS1_3658	PWY-5101	L-isoleucine biosynthesis II
R2APBS1_3658	PWY-5103	L-isoleucine biosynthesis III
R2APBS1_3658	PWY-5104	L-isoleucine biosynthesis IV
R2APBS1_3658	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
R2APBS1_3658	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
R2APBS1_3658	PWY-6389	(<i>S</i>)-acetoin biosynthesis
R2APBS1_3658	PWY-7111	pyruvate fermentation to isobutanol (engineered)
R2APBS1_3659	PWY-5101	L-isoleucine biosynthesis II
R2APBS1_3659	PWY-5103	L-isoleucine biosynthesis III
R2APBS1_3659	PWY-5104	L-isoleucine biosynthesis IV
R2APBS1_3659	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
R2APBS1_3659	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
R2APBS1_3659	PWY-6389	(<i>S</i>)-acetoin biosynthesis
R2APBS1_3659	PWY-7111	pyruvate fermentation to isobutanol (engineered)
R2APBS1_3667	PWY-6523	nitrite-dependent anaerobic methane oxidation
R2APBS1_3667	PWY-6748	nitrate reduction VII (denitrification)
R2APBS1_3667	PWY-7084	nitrifier denitrification
R2APBS1_3668	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
R2APBS1_3669	PWY-6519	8-amino-7-oxononanoate biosynthesis I
R2APBS1_3669	PWY-6578	8-amino-7-oxononanoate biosynthesis III
R2APBS1_3669	PWY-7147	8-amino-7-oxononanoate biosynthesis II
R2APBS1_3671	PWY-6519	8-amino-7-oxononanoate biosynthesis I
R2APBS1_3672	PWY-6519	8-amino-7-oxononanoate biosynthesis I
R2APBS1_3687	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
R2APBS1_3687	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
R2APBS1_3687	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
R2APBS1_3707	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
R2APBS1_3707	PWY-6148	tetrahydromethanopterin biosynthesis
R2APBS1_3707	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
R2APBS1_3707	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
R2APBS1_3708	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
R2APBS1_3708	PWY-6148	tetrahydromethanopterin biosynthesis
R2APBS1_3708	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
R2APBS1_3708	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
R2APBS1_3732	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
R2APBS1_3732	PWY-3162	L-tryptophan degradation V (side chain pathway)
R2APBS1_3732	PWY-5057	L-valine degradation II
R2APBS1_3732	PWY-5076	L-leucine degradation III
R2APBS1_3732	PWY-5078	L-isoleucine degradation II
R2APBS1_3732	PWY-5079	L-phenylalanine degradation III
R2APBS1_3732	PWY-5082	L-methionine degradation III
R2APBS1_3732	PWY-5480	pyruvate fermentation to ethanol I
R2APBS1_3732	PWY-5486	pyruvate fermentation to ethanol II
R2APBS1_3732	PWY-5751	phenylethanol biosynthesis
R2APBS1_3732	PWY-6028	acetoin degradation
R2APBS1_3732	PWY-6313	serotonin degradation
R2APBS1_3732	PWY-6333	acetaldehyde biosynthesis I
R2APBS1_3732	PWY-6342	noradrenaline and adrenaline degradation
R2APBS1_3732	PWY-6587	pyruvate fermentation to ethanol III
R2APBS1_3732	PWY-6802	salidroside biosynthesis
R2APBS1_3732	PWY-6871	3-methylbutanol biosynthesis
R2APBS1_3732	PWY-7013	L-1,2-propanediol degradation
R2APBS1_3732	PWY-7111	pyruvate fermentation to isobutanol (engineered)
R2APBS1_3732	PWY-7118	chitin degradation to ethanol
R2APBS1_3732	PWY-7396	butanol and isobutanol biosynthesis (engineered)
R2APBS1_3732	PWY-7557	dehydrodiconiferyl alcohol degradation
R2APBS1_3737	PWY-5913	TCA cycle VI (obligate autotrophs)
R2APBS1_3737	PWY-6549	L-glutamine biosynthesis III
R2APBS1_3737	PWY-6728	methylaspartate cycle
R2APBS1_3737	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
R2APBS1_3737	PWY-7124	ethylene biosynthesis V (engineered)
R2APBS1_3737	PWY-7254	TCA cycle VII (acetate-producers)
R2APBS1_3737	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
R2APBS1_3748	PWY-6012	acyl carrier protein metabolism I
R2APBS1_3753	PWY-1622	formaldehyde assimilation I (serine pathway)
R2APBS1_3753	PWY-5484	glycolysis II (from fructose 6-phosphate)
R2APBS1_3755	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
R2APBS1_3755	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
R2APBS1_3767	PWY-5971	palmitate biosynthesis II (bacteria and plants)
R2APBS1_3767	PWY-5973	<i>cis</i>-vaccenate biosynthesis
R2APBS1_3767	PWY-5989	stearate biosynthesis II (bacteria and plants)
R2APBS1_3767	PWY-5994	palmitate biosynthesis I (animals and fungi)
R2APBS1_3767	PWY-6113	superpathway of mycolate biosynthesis
R2APBS1_3767	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
R2APBS1_3767	PWY-6519	8-amino-7-oxononanoate biosynthesis I
R2APBS1_3767	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
R2APBS1_3767	PWYG-321	mycolate biosynthesis
R2APBS1_3771	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
R2APBS1_3774	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
R2APBS1_3776	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
R2APBS1_3799	PWY-7425	2-chloroacrylate degradation I
R2APBS1_3827	PWY-5381	pyridine nucleotide cycling (plants)
R2APBS1_3849	PWY-5686	UMP biosynthesis
R2APBS1_3851	PWY-6749	CMP-legionaminate biosynthesis I
R2APBS1_3852	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
R2APBS1_3852	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
R2APBS1_3852	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
R2APBS1_3852	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
R2APBS1_3859	PWY-40	putrescine biosynthesis I
R2APBS1_3859	PWY-43	putrescine biosynthesis II
R2APBS1_3859	PWY-6305	putrescine biosynthesis IV
R2APBS1_3859	PWY-6834	spermidine biosynthesis III
R2APBS1_3906	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
R2APBS1_3908	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
R2APBS1_3908	PWY-5723	Rubisco shunt
R2APBS1_3909	PWY-3801	sucrose degradation II (sucrose synthase)
R2APBS1_3909	PWY-5054	sorbitol biosynthesis I
R2APBS1_3909	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
R2APBS1_3909	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
R2APBS1_3909	PWY-5659	GDP-mannose biosynthesis
R2APBS1_3909	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
R2APBS1_3909	PWY-621	sucrose degradation III (sucrose invertase)
R2APBS1_3909	PWY-622	starch biosynthesis
R2APBS1_3909	PWY-6531	mannitol cycle
R2APBS1_3909	PWY-6981	chitin biosynthesis
R2APBS1_3909	PWY-7238	sucrose biosynthesis II
R2APBS1_3909	PWY-7347	sucrose biosynthesis III
R2APBS1_3909	PWY-7385	1,3-propanediol biosynthesis (engineered)
R2APBS1_3910	PWY-2723	trehalose degradation V
R2APBS1_3910	PWY-3801	sucrose degradation II (sucrose synthase)
R2APBS1_3910	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
R2APBS1_3910	PWY-5661	GDP-glucose biosynthesis
R2APBS1_3910	PWY-5661-1	R2APBS1_3910|R2APBS1_3910|REF_jgi:R2APBS1_3910|GeneID:14751270
R2APBS1_3910	PWY-5940	streptomycin biosynthesis
R2APBS1_3910	PWY-5941	glycogen degradation II (eukaryotic)
R2APBS1_3910	PWY-622	starch biosynthesis
R2APBS1_3910	PWY-6731	starch degradation III
R2APBS1_3910	PWY-6737	starch degradation V
R2APBS1_3910	PWY-6749	CMP-legionaminate biosynthesis I
R2APBS1_3910	PWY-7238	sucrose biosynthesis II
R2APBS1_3910	PWY-7343	UDP-glucose biosynthesis
R2APBS1_3911	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
R2APBS1_3911	PWY-5723	Rubisco shunt
R2APBS1_3911	PWY-6891	thiazole biosynthesis II (Bacillus)
R2APBS1_3911	PWY-6892	thiazole biosynthesis I (E. coli)
R2APBS1_3911	PWY-6901	superpathway of glucose and xylose degradation
R2APBS1_3911	PWY-7560	methylerythritol phosphate pathway II
R2APBS1_3913	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
R2APBS1_3913	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
R2APBS1_3923	PWY-3121	linamarin degradation
R2APBS1_3923	PWY-5176	coumarin biosynthesis (via 2-coumarate)
R2APBS1_3923	PWY-6002	lotaustralin degradation
R2APBS1_3923	PWY-6788	cellulose degradation II (fungi)
R2APBS1_3923	PWY-7089	taxiphyllin bioactivation
R2APBS1_3923	PWY-7091	linustatin bioactivation
R2APBS1_3923	PWY-7092	neolinustatin bioactivation
R2APBS1_3941	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
R2APBS1_3945	PWY-7391	isoprene biosynthesis II (engineered)
R2APBS1_3945	PWY-922	mevalonate pathway I
R2APBS1_3946	PWY-3821	galactose degradation III
R2APBS1_3946	PWY-6317	galactose degradation I (Leloir pathway)
R2APBS1_3946	PWY-6527	stachyose degradation
R2APBS1_3947	PWY-3821	galactose degradation III
R2APBS1_3947	PWY-6174	mevalonate pathway II (archaea)
R2APBS1_3947	PWY-6317	galactose degradation I (Leloir pathway)
R2APBS1_3947	PWY-6527	stachyose degradation
R2APBS1_3947	PWY-7391	isoprene biosynthesis II (engineered)
R2APBS1_3947	PWY-7524	mevalonate pathway III (archaea)
R2APBS1_3947	PWY-922	mevalonate pathway I
R2APBS1_3948	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
R2APBS1_3948	PWY-6174	mevalonate pathway II (archaea)
R2APBS1_3948	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
R2APBS1_3948	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
R2APBS1_3948	PWY-7102	bisabolene biosynthesis
R2APBS1_3948	PWY-7391	isoprene biosynthesis II (engineered)
R2APBS1_3948	PWY-7524	mevalonate pathway III (archaea)
R2APBS1_3948	PWY-7560	methylerythritol phosphate pathway II
R2APBS1_3948	PWY-922	mevalonate pathway I
R2APBS1_3951	PWY-2941	L-lysine biosynthesis II
R2APBS1_3951	PWY-5097	L-lysine biosynthesis VI
