RER_00140	PWY-6857	retinol biosynthesis
RER_00150	PWY-6857	retinol biosynthesis
RER_00220	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RER_00220	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RER_00270	PWY-5958	acridone alkaloid biosynthesis
RER_00270	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RER_00270	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RER_00600	PWY-6891	thiazole biosynthesis II (Bacillus)
RER_00600	PWY-6892	thiazole biosynthesis I (E. coli)
RER_00600	PWY-7560	methylerythritol phosphate pathway II
RER_00860	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
RER_00860	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
RER_00940	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
RER_00940	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RER_01240	PWY-4381	fatty acid biosynthesis initiation I
RER_01240	PWY-5743	3-hydroxypropanoate cycle
RER_01240	PWY-5744	glyoxylate assimilation
RER_01240	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RER_01240	PWY-6679	jadomycin biosynthesis
RER_01240	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RER_01260	PWY-5278	sulfite oxidation III
RER_01260	PWY-5340	sulfate activation for sulfonation
RER_01260	PWY-6683	sulfate reduction III (assimilatory)
RER_01260	PWY-6932	selenate reduction
RER_01270	PWY-5278	sulfite oxidation III
RER_01270	PWY-5340	sulfate activation for sulfonation
RER_01270	PWY-6683	sulfate reduction III (assimilatory)
RER_01270	PWY-6932	selenate reduction
RER_01470	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RER_01540	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RER_01640	PWY-6854	ethylene biosynthesis III (microbes)
RER_01870	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
RER_01960	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
RER_02110	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RER_02110	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
RER_02220	PWY-4381	fatty acid biosynthesis initiation I
RER_02220	PWY-5743	3-hydroxypropanoate cycle
RER_02220	PWY-5744	glyoxylate assimilation
RER_02220	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RER_02220	PWY-6679	jadomycin biosynthesis
RER_02220	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RER_02350	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RER_02350	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RER_02400	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
RER_02400	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
RER_02490	PWY-3221	dTDP-L-rhamnose biosynthesis II
RER_02490	PWY-6808	dTDP-D-forosamine biosynthesis
RER_02490	PWY-6942	dTDP-D-desosamine biosynthesis
RER_02490	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RER_02490	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
RER_02490	PWY-6974	dTDP-L-olivose biosynthesis
RER_02490	PWY-6976	dTDP-L-mycarose biosynthesis
RER_02490	PWY-7104	dTDP-L-megosamine biosynthesis
RER_02490	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
RER_02490	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
RER_02490	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
RER_02490	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
RER_02490	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
RER_02490	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
RER_02490	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
RER_02490	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
RER_02500	PWY-3221	dTDP-L-rhamnose biosynthesis II
RER_02500	PWY-6808	dTDP-D-forosamine biosynthesis
RER_02500	PWY-6942	dTDP-D-desosamine biosynthesis
RER_02500	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RER_02500	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
RER_02500	PWY-6974	dTDP-L-olivose biosynthesis
RER_02500	PWY-6976	dTDP-L-mycarose biosynthesis
RER_02500	PWY-7104	dTDP-L-megosamine biosynthesis
RER_02500	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
RER_02500	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
RER_02500	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
RER_02500	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
RER_02500	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
RER_02500	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
RER_02500	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
RER_02500	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
RER_02880	PWY-5704	urea degradation II
RER_02890	PWY-5704	urea degradation II
RER_02900	PWY-5704	urea degradation II
RER_02960	PWY-5530	sorbitol biosynthesis II
RER_02960	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RER_03200	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RER_03200	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RER_03440	PWY-6700	queuosine biosynthesis
RER_03540	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RER_03810	PWY-1361	benzoyl-CoA degradation I (aerobic)
RER_03810	PWY-5109	2-methylbutanoate biosynthesis
RER_03810	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RER_03810	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RER_03810	PWY-5177	glutaryl-CoA degradation
RER_03810	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RER_03810	PWY-6435	4-hydroxybenzoate biosynthesis V
RER_03810	PWY-6583	pyruvate fermentation to butanol I
RER_03810	PWY-6863	pyruvate fermentation to hexanol
RER_03810	PWY-6883	pyruvate fermentation to butanol II
RER_03810	PWY-6944	androstenedione degradation
RER_03810	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RER_03810	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RER_03810	PWY-7007	methyl ketone biosynthesis
RER_03810	PWY-7046	4-coumarate degradation (anaerobic)
RER_03810	PWY-7094	fatty acid salvage
RER_03810	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RER_03810	PWY-735	jasmonic acid biosynthesis
RER_03810	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RER_03840	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RER_03840	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RER_04110	PWY-6871	3-methylbutanol biosynthesis
RER_04140	PWY-2941	L-lysine biosynthesis II
RER_04140	PWY-2942	L-lysine biosynthesis III
RER_04140	PWY-5097	L-lysine biosynthesis VI
RER_04140	PWY-6559	spermidine biosynthesis II
RER_04140	PWY-6562	norspermidine biosynthesis
RER_04140	PWY-7153	grixazone biosynthesis
RER_04150	PWY-2941	L-lysine biosynthesis II
RER_04150	PWY-2942	L-lysine biosynthesis III
RER_04150	PWY-5097	L-lysine biosynthesis VI
RER_04150	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RER_04150	PWY-6559	spermidine biosynthesis II
RER_04150	PWY-6562	norspermidine biosynthesis
RER_04150	PWY-7153	grixazone biosynthesis
RER_04150	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RER_04340	PWY-5451	acetone degradation I (to methylglyoxal)
RER_04340	PWY-6588	pyruvate fermentation to acetone
RER_04340	PWY-6876	isopropanol biosynthesis
RER_04340	PWY-7466	acetone degradation III (to propane-1,2-diol)
RER_04460	PWY-5506	methanol oxidation to formaldehyde IV
RER_04530	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RER_04530	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RER_04730	PWY-5647	2-nitrobenzoate degradation I
RER_04730	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
RER_04730	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
RER_04730	PWY-6505	L-tryptophan degradation XII (Geobacillus)
RER_04920	PWY-3161	indole-3-acetate biosynthesis III (bacteria)
RER_04920	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
RER_04920	PWY-581	indole-3-acetate biosynthesis II
RER_04920	PWY-7308	acrylonitrile degradation I
RER_04960	PWY-6672	<i>cis</i>-genanyl-CoA degradation
RER_04960	PWY-7118	chitin degradation to ethanol
RER_05760	PWY-40	putrescine biosynthesis I
RER_05760	PWY-6305	putrescine biosynthesis IV
RER_05800	PWY-5022	4-aminobutanoate degradation V
RER_05800	PWY-6728	methylaspartate cycle
RER_05800	PWY-7126	ethylene biosynthesis IV
RER_05900	PWY-6857	retinol biosynthesis
RER_06050	PWY-5691	urate degradation to allantoin I
RER_06050	PWY-7394	urate degradation to allantoin II
RER_06080	PWY-6857	retinol biosynthesis
RER_06180	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RER_06180	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RER_06210	PWY-6599	guanine and guanosine salvage II
RER_06210	PWY-6609	adenine and adenosine salvage III
RER_06210	PWY-6610	adenine and adenosine salvage IV
RER_06210	PWY-6620	guanine and guanosine salvage
RER_06260	PWY-5663	tetrahydrobiopterin biosynthesis I
RER_06260	PWY-5664	tetrahydrobiopterin biosynthesis II
RER_06260	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RER_06260	PWY-6703	preQ<sub>0</sub> biosynthesis
RER_06260	PWY-6983	tetrahydrobiopterin biosynthesis III
RER_06260	PWY-7442	drosopterin and aurodrosopterin biosynthesis
RER_06270	PWY-6614	tetrahydrofolate biosynthesis
RER_06280	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RER_06280	PWY-6148	tetrahydromethanopterin biosynthesis
RER_06280	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RER_06280	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RER_06290	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RER_06290	PWY-6148	tetrahydromethanopterin biosynthesis
RER_06290	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RER_06290	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RER_06340	PWY-5155	&beta;-alanine biosynthesis III
RER_06350	PWY-3961	phosphopantothenate biosynthesis II
RER_06360	PWY-5331	taurine biosynthesis
RER_06440	PWY-6857	retinol biosynthesis
RER_06500	PWY-723	alkylnitronates degradation
RER_06590	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RER_06800	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RER_06800	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RER_06800	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RER_06800	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RER_06870	PWY-7560	methylerythritol phosphate pathway II
RER_06880	PWY-7560	methylerythritol phosphate pathway II
RER_07250	PWY-6857	retinol biosynthesis
RER_07350	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RER_07350	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RER_07400	PWY-5162	2-oxopentenoate degradation
RER_07400	PWY-5436	L-threonine degradation IV
RER_07400	PWY-5480	pyruvate fermentation to ethanol I
RER_07400	PWY-6587	pyruvate fermentation to ethanol III
RER_07400	PWY-7085	triethylamine degradation
RER_07400	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
RER_07410	PWY-5162	2-oxopentenoate degradation
RER_07640	PWY-6483	ceramide degradation
RER_07640	PWY-7119	sphingolipid recycling and degradation (yeast)
RER_07650	PWY-5451	acetone degradation I (to methylglyoxal)
RER_07650	PWY-6588	pyruvate fermentation to acetone
RER_07650	PWY-6876	isopropanol biosynthesis
RER_07650	PWY-7466	acetone degradation III (to propane-1,2-diol)
RER_07740	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RER_07740	PWY-5143	long-chain fatty acid activation
RER_07740	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
RER_07740	PWY-5885	wax esters biosynthesis II
RER_07740	PWY-5972	stearate biosynthesis I (animals and fungi)
RER_07740	PWY-5995	linoleate biosynthesis I (plants)
RER_07740	PWY-6000	&gamma;-linolenate biosynthesis II (animals)
RER_07740	PWY-6001	linoleate biosynthesis II (animals)
RER_07740	PWY-6803	phosphatidylcholine acyl editing
RER_07740	PWY-6873	long chain fatty acid ester synthesis for microdiesel production
RER_07740	PWY-6920	6-gingerol analog biosynthesis
RER_07740	PWY-6951	RER_07740
RER_07740	PWY-7033	alkane biosynthesis II
RER_07740	PWY-7035	(<i>Z</i>)-9-tricosene biosynthesis
RER_07740	PWY-7049	icosapentaenoate biosynthesis II (metazoa)
RER_07740	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
RER_07740	PWY-7094	fatty acid salvage
RER_07740	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
RER_08030	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RER_08030	PWY-6549	L-glutamine biosynthesis III
RER_08030	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RER_08030	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RER_08120	PWY-6823	molybdenum cofactor biosynthesis
RER_08400	PWY-1622	formaldehyde assimilation I (serine pathway)
RER_08400	PWY-5484	glycolysis II (from fructose 6-phosphate)
RER_08600	PWY-5692	allantoin degradation to glyoxylate II
RER_08600	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
RER_09170	PWY-723	alkylnitronates degradation
RER_09370	PWY-723	alkylnitronates degradation
RER_09470	PWY-2941	L-lysine biosynthesis II
RER_09470	PWY-2942	L-lysine biosynthesis III
RER_09470	PWY-5097	L-lysine biosynthesis VI
RER_09510	PWY-6906	chitin derivatives degradation
RER_09510	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
RER_09510	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
RER_09520	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RER_09520	PWY-6855	chitin degradation I (archaea)
RER_09520	PWY-6906	chitin derivatives degradation
RER_09530	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RER_09530	PWY-5143	long-chain fatty acid activation
RER_09530	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
RER_09530	PWY-5885	wax esters biosynthesis II
RER_09530	PWY-5972	stearate biosynthesis I (animals and fungi)
RER_09530	PWY-5995	linoleate biosynthesis I (plants)
RER_09530	PWY-6000	&gamma;-linolenate biosynthesis II (animals)
RER_09530	PWY-6001	linoleate biosynthesis II (animals)
RER_09530	PWY-6803	phosphatidylcholine acyl editing
RER_09530	PWY-6873	long chain fatty acid ester synthesis for microdiesel production
RER_09530	PWY-6920	6-gingerol analog biosynthesis
RER_09530	PWY-6951	RER_09530
RER_09530	PWY-7033	alkane biosynthesis II
RER_09530	PWY-7035	(<i>Z</i>)-9-tricosene biosynthesis
RER_09530	PWY-7049	icosapentaenoate biosynthesis II (metazoa)
RER_09530	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
RER_09530	PWY-7094	fatty acid salvage
RER_09530	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
RER_09890	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RER_09960	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
RER_09960	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
RER_10110	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RER_10110	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RER_10110	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RER_10250	PWY-6123	inosine-5'-phosphate biosynthesis I
RER_10250	PWY-6124	inosine-5'-phosphate biosynthesis II
RER_10250	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RER_10250	PWY-7234	inosine-5'-phosphate biosynthesis III
RER_10330	PWY-6123	inosine-5'-phosphate biosynthesis I
RER_10330	PWY-6124	inosine-5'-phosphate biosynthesis II
RER_10330	PWY-7234	inosine-5'-phosphate biosynthesis III
RER_10460	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RER_10460	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RER_10460	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RER_10470	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RER_10470	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RER_10470	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RER_10510	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RER_10510	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
RER_10510	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RER_10510	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RER_10720	PWY-6871	3-methylbutanol biosynthesis
RER_10900	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RER_10910	PWY-6936	seleno-amino acid biosynthesis
RER_10920	PWY-6936	seleno-amino acid biosynthesis
RER_10920	PWY-7274	D-cycloserine biosynthesis
RER_11000	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RER_11130	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RER_11150	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
RER_11150	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
RER_11150	PWY-5901	2,3-dihydroxybenzoate biosynthesis
RER_11150	PWY-5958	acridone alkaloid biosynthesis
RER_11150	PWY-6406	salicylate biosynthesis I
RER_11150	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RER_11150	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RER_11360	PWY-4381	fatty acid biosynthesis initiation I
RER_11540	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RER_11540	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RER_11730	PWY-6840	homoglutathione biosynthesis
RER_11730	PWY-7255	ergothioneine biosynthesis I (bacteria)
RER_11870	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RER_11870	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RER_12190	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RER_12190	PWY-6855	chitin degradation I (archaea)
RER_12190	PWY-6906	chitin derivatives degradation
RER_12280	PWY-3781	aerobic respiration I (cytochrome c)
RER_12280	PWY-4521	arsenite oxidation I (respiratory)
RER_12280	PWY-6692	Fe(II) oxidation
RER_12280	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RER_12380	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RER_12380	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RER_12540	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RER_12990	PWY-5506	methanol oxidation to formaldehyde IV
RER_13140	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
RER_13240	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
RER_13240	PWY-5739	GDP-D-perosamine biosynthesis
RER_13240	PWY-5740	GDP-L-colitose biosynthesis
RER_13240	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
RER_13250	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
RER_13260	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
RER_13290	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
RER_13780	PWY-5386	methylglyoxal degradation I
RER_13950	PWY-5686	UMP biosynthesis
RER_14120	PWY-1042	glycolysis IV (plant cytosol)
RER_14120	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RER_14120	PWY-5484	glycolysis II (from fructose 6-phosphate)
RER_14120	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RER_14120	PWY-7385	1,3-propanediol biosynthesis (engineered)
RER_14280	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RER_14720	PWY-1281	sulfoacetaldehyde degradation I
RER_14720	PWY-5482	pyruvate fermentation to acetate II
RER_14720	PWY-5485	pyruvate fermentation to acetate IV
RER_14720	PWY-5497	purine nucleobases degradation II (anaerobic)
RER_14720	PWY-6637	sulfolactate degradation II
RER_14730	PWY-5482	pyruvate fermentation to acetate II
RER_14730	PWY-5485	pyruvate fermentation to acetate IV
RER_14730	PWY-5497	purine nucleobases degradation II (anaerobic)
RER_14790	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RER_14790	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RER_14790	PWY-6897	thiamin salvage II
RER_14790	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RER_14790	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RER_14790	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
RER_14790	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RER_14820	PWY-6891	thiazole biosynthesis II (Bacillus)
RER_14820	PWY-6892	thiazole biosynthesis I (E. coli)
RER_14870	PWY-6910	hydroxymethylpyrimidine salvage
RER_14870	PWY-7356	thiamin salvage IV (yeast)
RER_14870	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RER_14880	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
RER_14950	PWY-6854	ethylene biosynthesis III (microbes)
RER_14960	PWY-6840	homoglutathione biosynthesis
RER_14960	PWY-7255	ergothioneine biosynthesis I (bacteria)
RER_15170	PWY-5669	phosphatidylethanolamine biosynthesis I
RER_15380	PWY-7533	gliotoxin biosynthesis
RER_15390	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
RER_15390	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RER_15450	PWY-5169	cyanurate degradation
RER_15450	PWY-5703	urea degradation I
RER_15450	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RER_15740	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RER_15750	PWY-1361	benzoyl-CoA degradation I (aerobic)
RER_15750	PWY-5109	2-methylbutanoate biosynthesis
RER_15750	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RER_15750	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RER_15750	PWY-5177	glutaryl-CoA degradation
RER_15750	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RER_15750	PWY-6435	4-hydroxybenzoate biosynthesis V
RER_15750	PWY-6583	pyruvate fermentation to butanol I
RER_15750	PWY-6863	pyruvate fermentation to hexanol
RER_15750	PWY-6883	pyruvate fermentation to butanol II
RER_15750	PWY-6944	androstenedione degradation
RER_15750	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RER_15750	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RER_15750	PWY-7007	methyl ketone biosynthesis
RER_15750	PWY-7046	4-coumarate degradation (anaerobic)
RER_15750	PWY-7094	fatty acid salvage
RER_15750	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RER_15750	PWY-735	jasmonic acid biosynthesis
RER_15750	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RER_15760	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RER_15760	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RER_15760	PWY-6936	seleno-amino acid biosynthesis
RER_15760	PWY-702	L-methionine biosynthesis II
RER_15920	PWY-2201	folate transformations I
RER_15920	PWY-5497	purine nucleobases degradation II (anaerobic)
RER_15930	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
RER_16010	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RER_16010	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RER_16200	PWY-1622	formaldehyde assimilation I (serine pathway)
RER_16200	PWY-5484	glycolysis II (from fructose 6-phosphate)
RER_16280	PWY-5667	CDP-diacylglycerol biosynthesis I
RER_16280	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
RER_16330	PWY-3341	L-proline biosynthesis III
RER_16330	PWY-4981	L-proline biosynthesis II (from arginine)
RER_16330	PWY-6344	L-ornithine degradation II (Stickland reaction)
RER_16410	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RER_16420	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RER_16420	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RER_16430	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RER_16430	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RER_16430	PWY-5194	siroheme biosynthesis
RER_16430	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RER_16440	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RER_16440	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RER_16530	PWY-5278	sulfite oxidation III
RER_16530	PWY-5340	sulfate activation for sulfonation
RER_16530	PWY-6683	sulfate reduction III (assimilatory)
RER_16530	PWY-6932	selenate reduction
RER_16540	PWY-5278	sulfite oxidation III
RER_16540	PWY-5340	sulfate activation for sulfonation
RER_16540	PWY-6683	sulfate reduction III (assimilatory)
RER_16540	PWY-6932	selenate reduction
RER_16630	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RER_16630	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
RER_16630	PWY-6920	6-gingerol analog biosynthesis
RER_16630	PWY-7007	methyl ketone biosynthesis
RER_16630	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
RER_16630	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
RER_16630	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
RER_16630	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
RER_16630	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
RER_16630	PWY-735	jasmonic acid biosynthesis
RER_16660	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RER_16820	PWY-5839	menaquinol-7 biosynthesis
RER_16820	PWY-5851	demethylmenaquinol-9 biosynthesis
RER_16820	PWY-5852	demethylmenaquinol-8 biosynthesis I
RER_16820	PWY-5853	demethylmenaquinol-6 biosynthesis I
RER_16820	PWY-5890	menaquinol-10 biosynthesis
RER_16820	PWY-5891	menaquinol-11 biosynthesis
RER_16820	PWY-5892	menaquinol-12 biosynthesis
RER_16820	PWY-5895	menaquinol-13 biosynthesis
RER_16980	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
RER_16980	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
RER_17000	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
RER_17000	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
RER_17040	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
RER_17040	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
RER_17070	PWY-5839	menaquinol-7 biosynthesis
RER_17070	PWY-5844	menaquinol-9 biosynthesis
RER_17070	PWY-5849	menaquinol-6 biosynthesis
RER_17070	PWY-5890	menaquinol-10 biosynthesis
RER_17070	PWY-5891	menaquinol-11 biosynthesis
RER_17070	PWY-5892	menaquinol-12 biosynthesis
RER_17070	PWY-5895	menaquinol-13 biosynthesis
RER_17510	PWY-7285	methylwyosine biosynthesis
RER_17510	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
RER_17540	PWY-4381	fatty acid biosynthesis initiation I
RER_17540	PWY-5743	3-hydroxypropanoate cycle
RER_17540	PWY-5744	glyoxylate assimilation
RER_17540	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RER_17540	PWY-6679	jadomycin biosynthesis
RER_17540	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RER_17710	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RER_17710	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RER_17770	PWY-6509	methanol oxidation to formaldehyde III
RER_18060	PWY-6167	flavin biosynthesis II (archaea)
RER_18210	PWY-3162	L-tryptophan degradation V (side chain pathway)
RER_18210	PWY-5057	L-valine degradation II
RER_18210	PWY-5076	L-leucine degradation III
RER_18210	PWY-5078	L-isoleucine degradation II
RER_18210	PWY-5079	L-phenylalanine degradation III
RER_18210	PWY-5082	L-methionine degradation III
RER_18210	PWY-5480	pyruvate fermentation to ethanol I
RER_18210	PWY-5486	pyruvate fermentation to ethanol II
RER_18210	PWY-5751	phenylethanol biosynthesis
RER_18210	PWY-6028	acetoin degradation
RER_18210	PWY-6313	serotonin degradation
RER_18210	PWY-6333	acetaldehyde biosynthesis I
RER_18210	PWY-6342	noradrenaline and adrenaline degradation
RER_18210	PWY-6587	pyruvate fermentation to ethanol III
RER_18210	PWY-6802	salidroside biosynthesis
RER_18210	PWY-6871	3-methylbutanol biosynthesis
RER_18210	PWY-7013	L-1,2-propanediol degradation
RER_18210	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RER_18210	PWY-7118	chitin degradation to ethanol
RER_18210	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RER_18210	PWY-7557	dehydrodiconiferyl alcohol degradation
RER_18300	PWY-4381	fatty acid biosynthesis initiation I
RER_18300	PWY-5743	3-hydroxypropanoate cycle
RER_18300	PWY-5744	glyoxylate assimilation
RER_18300	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RER_18300	PWY-6679	jadomycin biosynthesis
RER_18300	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RER_18400	PWY-6857	retinol biosynthesis
RER_18480	PWY-5958	acridone alkaloid biosynthesis
RER_18480	PWY-6543	4-aminobenzoate biosynthesis
RER_18480	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RER_18480	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RER_18480	PWY-6722	candicidin biosynthesis
RER_18490	PWY-3461	L-tyrosine biosynthesis II
RER_18490	PWY-3462	L-phenylalanine biosynthesis II
RER_18490	PWY-6120	L-tyrosine biosynthesis III
RER_18490	PWY-6406	salicylate biosynthesis I
RER_18490	PWY-6627	salinosporamide A biosynthesis
RER_18740	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RER_19060	PWY-6749	CMP-legionaminate biosynthesis I
RER_19110	PWY-6749	CMP-legionaminate biosynthesis I
RER_19130	PWY-6938	NADH repair
RER_19140	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RER_19330	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RER_19330	PWY-6596	adenosine nucleotides degradation I
RER_19330	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RER_19380	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RER_19510	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RER_19510	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RER_19590	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RER_19590	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RER_19590	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RER_19590	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RER_19590	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RER_19590	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RER_19590	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RER_19590	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RER_19780	PWY-5491	diethylphosphate degradation
RER_19980	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
RER_19980	PWY-2201	folate transformations I
RER_19980	PWY-3841	folate transformations II
RER_19980	PWY-5030	L-histidine degradation III
RER_19980	PWY-5497	purine nucleobases degradation II (anaerobic)
RER_19980	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
RER_20020	PWY-5344	L-homocysteine biosynthesis
RER_20030	PWY-5344	L-homocysteine biosynthesis
RER_20030	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RER_20050	PWY-5913	TCA cycle VI (obligate autotrophs)
RER_20050	PWY-6549	L-glutamine biosynthesis III
RER_20050	PWY-6728	methylaspartate cycle
RER_20050	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RER_20050	PWY-7124	ethylene biosynthesis V (engineered)
RER_20050	PWY-7254	TCA cycle VII (acetate-producers)
RER_20050	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RER_20140	PWY-5642	2,4-dinitrotoluene degradation
RER_20140	PWY-6373	acrylate degradation
RER_20160	PWY-5940	streptomycin biosynthesis
RER_20160	PWY-7237	<i>myo</i>-, <i>chiro</i>- and <i>scillo</i>-inositol degradation
RER_20160	PWY-7241	<I>myo</I>-inositol degradation II
RER_20190	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
RER_20420	PWY-3781	aerobic respiration I (cytochrome c)
RER_20420	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RER_20420	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RER_20420	PWY-5690	TCA cycle II (plants and fungi)
RER_20420	PWY-6728	methylaspartate cycle
RER_20420	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RER_20420	PWY-7254	TCA cycle VII (acetate-producers)
RER_20420	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RER_20430	PWY-3781	aerobic respiration I (cytochrome c)
RER_20430	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RER_20430	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RER_20430	PWY-5690	TCA cycle II (plants and fungi)
RER_20430	PWY-6728	methylaspartate cycle
RER_20430	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RER_20430	PWY-7254	TCA cycle VII (acetate-producers)
RER_20430	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RER_20470	PWY-7181	pyrimidine deoxyribonucleosides degradation
RER_20480	PWY-6609	adenine and adenosine salvage III
RER_20480	PWY-6611	adenine and adenosine salvage V
RER_20480	PWY-7179	purine deoxyribonucleosides degradation I
RER_20480	PWY-7179-1	purine deoxyribonucleosides degradation
RER_20730	PWY-7183	pyrimidine nucleobases salvage I
RER_20740	PWY-6749	CMP-legionaminate biosynthesis I
RER_20750	PWY-4202	arsenate detoxification I (glutaredoxin)
RER_20750	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RER_20750	PWY-6608	guanosine nucleotides degradation III
RER_20750	PWY-6609	adenine and adenosine salvage III
RER_20750	PWY-6611	adenine and adenosine salvage V
RER_20750	PWY-6620	guanine and guanosine salvage
RER_20750	PWY-6627	salinosporamide A biosynthesis
RER_20750	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
RER_20750	PWY-7179	purine deoxyribonucleosides degradation I
RER_20750	PWY-7179-1	purine deoxyribonucleosides degradation
RER_20800	PWY-4041	&gamma;-glutamyl cycle
RER_20870	PWY-4261	glycerol degradation I
RER_20880	PWY-4261	glycerol degradation I
RER_20880	PWY-6118	glycerol-3-phosphate shuttle
RER_20880	PWY-6952	glycerophosphodiester degradation
RER_21100	PWY-5298	L-lysine degradation VI
RER_21140	PWY-5691	urate degradation to allantoin I
RER_21150	PWY-5691	urate degradation to allantoin I
RER_21150	PWY-7394	urate degradation to allantoin II
RER_21160	PWY-5691	urate degradation to allantoin I
RER_21160	PWY-7394	urate degradation to allantoin II
RER_21240	PWY-5350	thiosulfate disproportionation III (rhodanese)
RER_21310	PWY-4381	fatty acid biosynthesis initiation I
RER_21310	PWY-5743	3-hydroxypropanoate cycle
RER_21310	PWY-5744	glyoxylate assimilation
RER_21310	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RER_21310	PWY-6679	jadomycin biosynthesis
RER_21310	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RER_21320	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RER_21320	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
RER_21390	PWY-6123	inosine-5'-phosphate biosynthesis I
RER_21390	PWY-7234	inosine-5'-phosphate biosynthesis III
RER_21520	PWY-5199	factor 420 polyglutamylation
RER_21530	PWY-5198	factor 420 biosynthesis
RER_21570	PWY-6749	CMP-legionaminate biosynthesis I
RER_21590	PWY-3861	mannitol degradation II
RER_21590	PWY-3881	mannitol biosynthesis
RER_21590	PWY-5659	GDP-mannose biosynthesis
RER_21590	PWY-7456	mannan degradation
RER_21590	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
RER_21660	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RER_21670	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RER_21670	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RER_21670	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RER_21670	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
RER_21670	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RER_21670	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RER_21820	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RER_22070	PWY-6683	sulfate reduction III (assimilatory)
RER_22090	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RER_22090	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RER_22100	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RER_22150	PWY-6823	molybdenum cofactor biosynthesis
RER_22220	PWY-5381	pyridine nucleotide cycling (plants)
RER_23060	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RER_23060	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RER_23060	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RER_23060	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RER_23280	PWY-2723	trehalose degradation V
RER_23280	PWY-3801	sucrose degradation II (sucrose synthase)
RER_23280	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
RER_23280	PWY-5661	GDP-glucose biosynthesis
RER_23280	PWY-5661-1	RER_23280
RER_23280	PWY-5940	streptomycin biosynthesis
RER_23280	PWY-5941	glycogen degradation II (eukaryotic)
RER_23280	PWY-622	starch biosynthesis
RER_23280	PWY-6731	starch degradation III
RER_23280	PWY-6737	starch degradation V
RER_23280	PWY-6749	CMP-legionaminate biosynthesis I
RER_23280	PWY-7238	sucrose biosynthesis II
RER_23280	PWY-7343	UDP-glucose biosynthesis
RER_23360	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RER_23360	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
RER_23380	PWY-6823	molybdenum cofactor biosynthesis
RER_23400	PWY-6823	molybdenum cofactor biosynthesis
RER_23410	PWY-6823	molybdenum cofactor biosynthesis
RER_23520	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RER_23520	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RER_23520	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RER_23520	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RER_23520	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RER_23520	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RER_23520	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RER_23520	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RER_23530	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RER_23530	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RER_23530	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RER_23530	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RER_23530	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RER_23530	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RER_23530	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RER_23530	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RER_23570	PWY-3781	aerobic respiration I (cytochrome c)
RER_23570	PWY-4521	arsenite oxidation I (respiratory)
RER_23570	PWY-6692	Fe(II) oxidation
RER_23570	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RER_23700	PWY-622	starch biosynthesis
RER_23710	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
RER_23710	PWY-622	starch biosynthesis
RER_23770	PWY-6823	molybdenum cofactor biosynthesis
RER_23770	PWY-6891	thiazole biosynthesis II (Bacillus)
RER_23770	PWY-6892	thiazole biosynthesis I (E. coli)
RER_23770	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RER_23790	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RER_23790	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RER_23790	PWY-6936	seleno-amino acid biosynthesis
RER_23790	PWY-702	L-methionine biosynthesis II
RER_23840	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RER_23860	PWY-6803	phosphatidylcholine acyl editing
RER_23860	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
RER_23860	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
RER_23860	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
RER_23890	PWY-1042	glycolysis IV (plant cytosol)
RER_23890	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RER_23890	PWY-5484	glycolysis II (from fructose 6-phosphate)
RER_23890	PWY-7385	1,3-propanediol biosynthesis (engineered)
RER_23950	PWY-5101	L-isoleucine biosynthesis II
RER_23950	PWY-5103	L-isoleucine biosynthesis III
RER_23950	PWY-5104	L-isoleucine biosynthesis IV
RER_23950	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RER_23970	PWY-5101	L-isoleucine biosynthesis II
RER_23970	PWY-5103	L-isoleucine biosynthesis III
RER_23970	PWY-5104	L-isoleucine biosynthesis IV
RER_23970	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
RER_23970	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RER_23970	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RER_23970	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RER_23980	PWY-5101	L-isoleucine biosynthesis II
RER_23980	PWY-5103	L-isoleucine biosynthesis III
RER_23980	PWY-5104	L-isoleucine biosynthesis IV
RER_23980	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
RER_23980	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RER_23980	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RER_23980	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RER_23990	PWY-5101	L-isoleucine biosynthesis II
RER_23990	PWY-5103	L-isoleucine biosynthesis III
RER_23990	PWY-5104	L-isoleucine biosynthesis IV
RER_23990	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RER_24010	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RER_24040	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RER_24060	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RER_24060	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RER_24130	PWY-5198	factor 420 biosynthesis
RER_24140	PWY-5667	CDP-diacylglycerol biosynthesis I
RER_24140	PWY-5981	CDP-diacylglycerol biosynthesis III
RER_24160	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RER_24160	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RER_24180	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RER_24180	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RER_24180	PWY-6896	thiamin salvage I
RER_24180	PWY-6897	thiamin salvage II
RER_24250	PWY-5750	itaconate biosynthesis
RER_24250	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RER_24250	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
RER_24470	PWY-6829	tRNA methylation (yeast)
RER_24470	PWY-7285	methylwyosine biosynthesis
RER_24470	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
RER_25520	PWY-7560	methylerythritol phosphate pathway II
RER_25540	PWY-7560	methylerythritol phosphate pathway II
RER_25950	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RER_25950	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RER_26020	PWY-6421	arsenate detoxification III (mycothiol)
RER_26040	PWY-7254	TCA cycle VII (acetate-producers)
RER_26070	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RER_26070	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RER_26070	PWY-6268	adenosylcobalamin salvage from cobalamin
RER_26070	PWY-6269	adenosylcobalamin salvage from cobinamide II
RER_26100	PWY-5194	siroheme biosynthesis
RER_26100	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RER_26200	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RER_26200	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RER_26380	PWY-6012	acyl carrier protein metabolism I
RER_26380	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
RER_26420	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
RER_26420	PWY-6167	flavin biosynthesis II (archaea)
RER_26420	PWY-6168	flavin biosynthesis III (fungi)
RER_26680	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RER_26680	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RER_26830	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RER_26830	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
RER_26900	PWY-2941	L-lysine biosynthesis II
RER_26900	PWY-2942	L-lysine biosynthesis III
RER_26900	PWY-5097	L-lysine biosynthesis VI
RER_26950	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
RER_26950	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
RER_26950	PWY-5901	2,3-dihydroxybenzoate biosynthesis
RER_26950	PWY-6406	salicylate biosynthesis I
RER_26970	PWY-5901	2,3-dihydroxybenzoate biosynthesis
RER_26990	PWY-5901	2,3-dihydroxybenzoate biosynthesis
RER_27310	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RER_27320	PWY-2941	L-lysine biosynthesis II
RER_27320	PWY-2942	L-lysine biosynthesis III
RER_27320	PWY-5097	L-lysine biosynthesis VI
RER_27390	PWY-5269	cardiolipin biosynthesis II
RER_27390	PWY-5668	cardiolipin biosynthesis I
RER_27500	PWY-4261	glycerol degradation I
RER_27500	PWY-6118	glycerol-3-phosphate shuttle
RER_27500	PWY-6952	glycerophosphodiester degradation
RER_27510	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RER_27510	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
RER_27510	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RER_27510	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RER_27630	PWY-2781	<i>cis</i>-zeatin biosynthesis
RER_27650	PWY-2941	L-lysine biosynthesis II
RER_27650	PWY-5097	L-lysine biosynthesis VI
RER_27700	PWY-7310	D-glucosaminate degradation
RER_27710	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
RER_27710	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
RER_27890	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RER_27890	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RER_28000	PWY-3821	galactose degradation III
RER_28000	PWY-6317	galactose degradation I (Leloir pathway)
RER_28000	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RER_28000	PWY-6527	stachyose degradation
RER_28000	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
RER_28000	PWY-7344	UDP-D-galactose biosynthesis
RER_28030	PWY-5392	reductive TCA cycle II
RER_28030	PWY-5537	pyruvate fermentation to acetate V
RER_28030	PWY-5538	pyruvate fermentation to acetate VI
RER_28030	PWY-5690	TCA cycle II (plants and fungi)
RER_28030	PWY-5913	TCA cycle VI (obligate autotrophs)
RER_28030	PWY-6728	methylaspartate cycle
RER_28030	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RER_28030	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RER_28220	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RER_28220	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RER_28220	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RER_28220	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
RER_28360	PWY-6891	thiazole biosynthesis II (Bacillus)
RER_28360	PWY-6892	thiazole biosynthesis I (E. coli)
RER_28360	PWY-7560	methylerythritol phosphate pathway II
RER_28420	PWY-1361	benzoyl-CoA degradation I (aerobic)
RER_28420	PWY-5109	2-methylbutanoate biosynthesis
RER_28420	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RER_28420	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RER_28420	PWY-5177	glutaryl-CoA degradation
RER_28420	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RER_28420	PWY-6435	4-hydroxybenzoate biosynthesis V
RER_28420	PWY-6583	pyruvate fermentation to butanol I
RER_28420	PWY-6863	pyruvate fermentation to hexanol
RER_28420	PWY-6883	pyruvate fermentation to butanol II
RER_28420	PWY-6944	androstenedione degradation
RER_28420	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RER_28420	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RER_28420	PWY-7007	methyl ketone biosynthesis
RER_28420	PWY-7046	4-coumarate degradation (anaerobic)
RER_28420	PWY-7094	fatty acid salvage
RER_28420	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RER_28420	PWY-735	jasmonic acid biosynthesis
RER_28420	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RER_28470	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RER_28470	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RER_28480	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RER_28480	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RER_28610	PWY-3121	linamarin degradation
RER_28610	PWY-5176	coumarin biosynthesis (via 2-coumarate)
RER_28610	PWY-6002	lotaustralin degradation
RER_28610	PWY-6788	cellulose degradation II (fungi)
RER_28610	PWY-7089	taxiphyllin bioactivation
RER_28610	PWY-7091	linustatin bioactivation
RER_28610	PWY-7092	neolinustatin bioactivation
RER_28620	PWY-6871	3-methylbutanol biosynthesis
RER_29090	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
RER_29150	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
RER_29300	PWY-6605	adenine and adenosine salvage II
RER_29300	PWY-6610	adenine and adenosine salvage IV
RER_29370	PWY-1622	formaldehyde assimilation I (serine pathway)
RER_29370	PWY-5392	reductive TCA cycle II
RER_29370	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RER_29370	PWY-5690	TCA cycle II (plants and fungi)
RER_29370	PWY-5913	TCA cycle VI (obligate autotrophs)
RER_29370	PWY-6728	methylaspartate cycle
RER_29370	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RER_29370	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RER_29370	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RER_29880	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RER_29880	PWY-6164	3-dehydroquinate biosynthesis I
RER_29880	PWY-6416	quinate degradation II
RER_29880	PWY-6707	gallate biosynthesis
RER_29910	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RER_29920	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RER_29930	PWY-6164	3-dehydroquinate biosynthesis I
RER_29940	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RER_29940	PWY-6416	quinate degradation II
RER_29940	PWY-6707	gallate biosynthesis
RER_29990	PWY-7183	pyrimidine nucleobases salvage I
RER_30000	PWY-5686	UMP biosynthesis
RER_30010	PWY-5686	UMP biosynthesis
RER_30030	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RER_30030	PWY-5686	UMP biosynthesis
RER_30030	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RER_30040	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RER_30040	PWY-5686	UMP biosynthesis
RER_30040	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RER_30050	PWY-5686	UMP biosynthesis
RER_30080	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RER_30110	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RER_30110	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
RER_30140	PWY-6857	retinol biosynthesis
RER_30190	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RER_30190	PWY-5723	Rubisco shunt
RER_30210	PWY-6167	flavin biosynthesis II (archaea)
RER_30210	PWY-6168	flavin biosynthesis III (fungi)
RER_30210	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RER_30220	PWY-6167	flavin biosynthesis II (archaea)
RER_30220	PWY-6168	flavin biosynthesis III (fungi)
RER_30220	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RER_30230	PWY-6167	flavin biosynthesis II (archaea)
RER_30230	PWY-6168	flavin biosynthesis III (fungi)
RER_30290	PWY-1042	glycolysis IV (plant cytosol)
RER_30290	PWY-5484	glycolysis II (from fructose 6-phosphate)
RER_30290	PWY-6901	superpathway of glucose and xylose degradation
RER_30290	PWY-7003	glycerol degradation to butanol
RER_30300	PWY-1042	glycolysis IV (plant cytosol)
RER_30300	PWY-5484	glycolysis II (from fructose 6-phosphate)
RER_30300	PWY-6886	1-butanol autotrophic biosynthesis
RER_30300	PWY-6901	superpathway of glucose and xylose degradation
RER_30300	PWY-7003	glycerol degradation to butanol
RER_30310	PWY-1042	glycolysis IV (plant cytosol)
RER_30310	PWY-5484	glycolysis II (from fructose 6-phosphate)
RER_30310	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RER_30310	PWY-7003	glycerol degradation to butanol
RER_30340	PWY-1622	formaldehyde assimilation I (serine pathway)
RER_30340	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RER_30340	PWY-5913	TCA cycle VI (obligate autotrophs)
RER_30340	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RER_30340	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
RER_30340	PWY-6549	L-glutamine biosynthesis III
RER_30340	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RER_30340	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RER_30340	PWY-7124	ethylene biosynthesis V (engineered)
RER_30410	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RER_30410	PWY-6855	chitin degradation I (archaea)
RER_30410	PWY-6906	chitin derivatives degradation
RER_30430	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RER_30440	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RER_30440	PWY-5723	Rubisco shunt
RER_30450	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RER_30450	PWY-5723	Rubisco shunt
RER_30450	PWY-6891	thiazole biosynthesis II (Bacillus)
RER_30450	PWY-6892	thiazole biosynthesis I (E. coli)
RER_30450	PWY-6901	superpathway of glucose and xylose degradation
RER_30450	PWY-7560	methylerythritol phosphate pathway II
RER_30580	PWY-6823	molybdenum cofactor biosynthesis
RER_30580	PWY-6891	thiazole biosynthesis II (Bacillus)
RER_30580	PWY-6892	thiazole biosynthesis I (E. coli)
RER_30580	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RER_30750	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RER_30750	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RER_30750	PWY-5989	stearate biosynthesis II (bacteria and plants)
RER_30750	PWY-6113	superpathway of mycolate biosynthesis
RER_30750	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RER_30750	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RER_30750	PWY-7096	triclosan resistance
RER_30750	PWYG-321	mycolate biosynthesis
RER_30880	PWY-5743	3-hydroxypropanoate cycle
RER_30880	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RER_30880	PWY-6728	methylaspartate cycle
RER_30880	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RER_30890	PWY-5743	3-hydroxypropanoate cycle
RER_30890	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RER_30890	PWY-6728	methylaspartate cycle
RER_30890	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RER_30980	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RER_30980	PWY-6596	adenosine nucleotides degradation I
RER_30980	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RER_31180	PWY-3821	galactose degradation III
RER_31180	PWY-6317	galactose degradation I (Leloir pathway)
RER_31180	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RER_31180	PWY-6527	stachyose degradation
RER_31180	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
RER_31180	PWY-7344	UDP-D-galactose biosynthesis
RER_31220	PWY-6857	retinol biosynthesis
RER_31390	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RER_31390	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RER_31420	PWY-6683	sulfate reduction III (assimilatory)
RER_31440	PWY-5194	siroheme biosynthesis
RER_31440	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RER_31590	PWY-5194	siroheme biosynthesis
RER_31590	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RER_31600	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RER_31620	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RER_31620	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RER_31720	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RER_31720	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RER_31720	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
RER_31810	PWY-6829	tRNA methylation (yeast)
RER_31890	PWY-2201	folate transformations I
RER_31890	PWY-3841	folate transformations II
RER_32040	PWY-5874	heme degradation
RER_32040	PWY-5915	phycoerythrobilin biosynthesis I
RER_32040	PWY-5917	phycocyanobilin biosynthesis
RER_32040	PWY-7170	phytochromobilin biosynthesis
RER_32110	PWY-5686	UMP biosynthesis
RER_32170	PWY-6728	methylaspartate cycle
RER_32170	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RER_32170	PWY-7118	chitin degradation to ethanol
RER_32170	PWY-7294	xylose degradation IV
RER_32170	PWY-7295	L-arabinose degradation IV
RER_32290	PWY-5269	cardiolipin biosynthesis II
RER_32290	PWY-5668	cardiolipin biosynthesis I
RER_32340	PWY-4061	glutathione-mediated detoxification I
RER_32340	PWY-6842	glutathione-mediated detoxification II
RER_32340	PWY-7112	4-hydroxy-2-nonenal detoxification
RER_32350	PWY-6910	hydroxymethylpyrimidine salvage
RER_32350	PWY-7356	thiamin salvage IV (yeast)
RER_32350	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RER_32550	PWY-7205	CMP phosphorylation
RER_32620	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
RER_32620	PWY-7177	UTP and CTP dephosphorylation II
RER_32620	PWY-7185	UTP and CTP dephosphorylation I
RER_32640	PWY-6898	thiamin salvage III
RER_32640	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RER_32640	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RER_32660	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RER_32660	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RER_32660	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
RER_32770	PWY-4983	L-citrulline-nitric oxide cycle
RER_32770	PWY-4984	urea cycle
RER_32770	PWY-5	canavanine biosynthesis
RER_32770	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RER_32770	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RER_32780	PWY-4983	L-citrulline-nitric oxide cycle
RER_32780	PWY-4984	urea cycle
RER_32780	PWY-5	canavanine biosynthesis
RER_32780	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RER_32780	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RER_32800	PWY-4981	L-proline biosynthesis II (from arginine)
RER_32800	PWY-4984	urea cycle
RER_32800	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RER_32820	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RER_32820	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RER_32830	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RER_32840	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RER_32840	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RER_33430	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
RER_33430	PWY-2201	folate transformations I
RER_33430	PWY-3841	folate transformations II
RER_33430	PWY-5030	L-histidine degradation III
RER_33430	PWY-5497	purine nucleobases degradation II (anaerobic)
RER_33430	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
RER_33460	PWY-1042	glycolysis IV (plant cytosol)
RER_33460	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RER_33460	PWY-5484	glycolysis II (from fructose 6-phosphate)
RER_33460	PWY-5723	Rubisco shunt
RER_33460	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RER_33460	PWY-6886	1-butanol autotrophic biosynthesis
RER_33460	PWY-6901	superpathway of glucose and xylose degradation
RER_33460	PWY-7003	glycerol degradation to butanol
RER_33460	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RER_33460	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RER_33560	PWY-5958	acridone alkaloid biosynthesis
RER_33560	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RER_33560	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RER_33970	PWY-5484	glycolysis II (from fructose 6-phosphate)
RER_34100	PWY-4381	fatty acid biosynthesis initiation I
RER_34110	PWY-4381	fatty acid biosynthesis initiation I
RER_34240	PWY-3162	L-tryptophan degradation V (side chain pathway)
RER_34240	PWY-5057	L-valine degradation II
RER_34240	PWY-5076	L-leucine degradation III
RER_34240	PWY-5078	L-isoleucine degradation II
RER_34240	PWY-5079	L-phenylalanine degradation III
RER_34240	PWY-5082	L-methionine degradation III
RER_34240	PWY-5480	pyruvate fermentation to ethanol I
RER_34240	PWY-5486	pyruvate fermentation to ethanol II
RER_34240	PWY-5751	phenylethanol biosynthesis
RER_34240	PWY-6028	acetoin degradation
RER_34240	PWY-6313	serotonin degradation
RER_34240	PWY-6333	acetaldehyde biosynthesis I
RER_34240	PWY-6342	noradrenaline and adrenaline degradation
RER_34240	PWY-6587	pyruvate fermentation to ethanol III
RER_34240	PWY-6802	salidroside biosynthesis
RER_34240	PWY-6871	3-methylbutanol biosynthesis
RER_34240	PWY-7013	L-1,2-propanediol degradation
RER_34240	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RER_34240	PWY-7118	chitin degradation to ethanol
RER_34240	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RER_34240	PWY-7557	dehydrodiconiferyl alcohol degradation
RER_34630	PWY-6857	retinol biosynthesis
RER_34770	PWY-2941	L-lysine biosynthesis II
RER_34770	PWY-2942	L-lysine biosynthesis III
RER_34770	PWY-5097	L-lysine biosynthesis VI
RER_34790	PWY-5316	nicotine biosynthesis
RER_34790	PWY-5381	pyridine nucleotide cycling (plants)
RER_34790	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
RER_34790	PWY-7342	superpathway of nicotine biosynthesis
RER_34800	PWY-5316	nicotine biosynthesis
RER_34800	PWY-7342	superpathway of nicotine biosynthesis
RER_34810	PWY-5316	nicotine biosynthesis
RER_34810	PWY-7342	superpathway of nicotine biosynthesis
RER_34880	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RER_34980	PWY-6174	mevalonate pathway II (archaea)
RER_34980	PWY-7391	isoprene biosynthesis II (engineered)
RER_34980	PWY-7524	mevalonate pathway III (archaea)
RER_34980	PWY-922	mevalonate pathway I
RER_35030	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RER_35070	PWY-2661	trehalose biosynthesis V
RER_35240	PWY-2661	trehalose biosynthesis V
RER_35380	PWY-4321	L-glutamate degradation IV
RER_35470	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RER_35510	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RER_35510	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RER_35520	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RER_35520	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
RER_35520	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RER_35520	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RER_35540	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RER_35540	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RER_35550	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RER_35550	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RER_35550	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RER_35560	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RER_35560	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RER_35690	PWY-2201	folate transformations I
RER_35690	PWY-3841	folate transformations II
RER_35780	PWY-6164	3-dehydroquinate biosynthesis I
RER_36010	PWY-3781	aerobic respiration I (cytochrome c)
RER_36010	PWY-4521	arsenite oxidation I (respiratory)
RER_36010	PWY-6692	Fe(II) oxidation
RER_36010	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RER_36080	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RER_36080	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RER_36080	PWY-6269	adenosylcobalamin salvage from cobinamide II
RER_36090	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RER_36090	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RER_36090	PWY-6269	adenosylcobalamin salvage from cobinamide II
RER_36100	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RER_36100	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RER_36100	PWY-6269	adenosylcobalamin salvage from cobinamide II
RER_36130	PWY-5057	L-valine degradation II
RER_36130	PWY-5076	L-leucine degradation III
RER_36130	PWY-5078	L-isoleucine degradation II
RER_36130	PWY-5101	L-isoleucine biosynthesis II
RER_36130	PWY-5103	L-isoleucine biosynthesis III
RER_36130	PWY-5104	L-isoleucine biosynthesis IV
RER_36130	PWY-5108	L-isoleucine biosynthesis V
RER_36150	PWY-5988	wound-induced proteolysis I
RER_36150	PWY-6018	seed germination protein turnover
RER_36190	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RER_36190	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
RER_36200	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RER_36200	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
RER_36200	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
RER_36230	PWY-381	nitrate reduction II (assimilatory)
RER_36230	PWY-5675	nitrate reduction V (assimilatory)
RER_36230	PWY-6549	L-glutamine biosynthesis III
RER_36230	PWY-6963	ammonia assimilation cycle I
RER_36230	PWY-6964	ammonia assimilation cycle II
RER_36400	PWY-6897	thiamin salvage II
RER_36400	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
RER_36400	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RER_36460	PWY-3162	L-tryptophan degradation V (side chain pathway)
RER_36460	PWY-5057	L-valine degradation II
RER_36460	PWY-5076	L-leucine degradation III
RER_36460	PWY-5078	L-isoleucine degradation II
RER_36460	PWY-5079	L-phenylalanine degradation III
RER_36460	PWY-5082	L-methionine degradation III
RER_36460	PWY-5480	pyruvate fermentation to ethanol I
RER_36460	PWY-5486	pyruvate fermentation to ethanol II
RER_36460	PWY-5751	phenylethanol biosynthesis
RER_36460	PWY-6028	acetoin degradation
RER_36460	PWY-6313	serotonin degradation
RER_36460	PWY-6333	acetaldehyde biosynthesis I
RER_36460	PWY-6342	noradrenaline and adrenaline degradation
RER_36460	PWY-6587	pyruvate fermentation to ethanol III
RER_36460	PWY-6802	salidroside biosynthesis
RER_36460	PWY-6871	3-methylbutanol biosynthesis
RER_36460	PWY-7013	L-1,2-propanediol degradation
RER_36460	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RER_36460	PWY-7118	chitin degradation to ethanol
RER_36460	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RER_36460	PWY-7557	dehydrodiconiferyl alcohol degradation
RER_36490	PWY-381	nitrate reduction II (assimilatory)
RER_36490	PWY-5675	nitrate reduction V (assimilatory)
RER_36490	PWY-6549	L-glutamine biosynthesis III
RER_36490	PWY-6963	ammonia assimilation cycle I
RER_36490	PWY-6964	ammonia assimilation cycle II
RER_36510	PWY-6654	phosphopantothenate biosynthesis III
RER_36600	PWY-5663	tetrahydrobiopterin biosynthesis I
RER_36600	PWY-5664	tetrahydrobiopterin biosynthesis II
RER_36600	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RER_36600	PWY-6703	preQ<sub>0</sub> biosynthesis
RER_36600	PWY-6983	tetrahydrobiopterin biosynthesis III
RER_36600	PWY-7442	drosopterin and aurodrosopterin biosynthesis
RER_36700	PWY-6891	thiazole biosynthesis II (Bacillus)
RER_36700	PWY-6892	thiazole biosynthesis I (E. coli)
RER_36700	PWY-7560	methylerythritol phosphate pathway II
RER_36750	PWY-4381	fatty acid biosynthesis initiation I
RER_36750	PWY-5743	3-hydroxypropanoate cycle
RER_36750	PWY-5744	glyoxylate assimilation
RER_36750	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RER_36750	PWY-6679	jadomycin biosynthesis
RER_36750	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RER_36780	PWY-3162	L-tryptophan degradation V (side chain pathway)
RER_36780	PWY-5057	L-valine degradation II
RER_36780	PWY-5076	L-leucine degradation III
RER_36780	PWY-5078	L-isoleucine degradation II
RER_36780	PWY-5079	L-phenylalanine degradation III
RER_36780	PWY-5082	L-methionine degradation III
RER_36780	PWY-5480	pyruvate fermentation to ethanol I
RER_36780	PWY-5486	pyruvate fermentation to ethanol II
RER_36780	PWY-5751	phenylethanol biosynthesis
RER_36780	PWY-6028	acetoin degradation
RER_36780	PWY-6313	serotonin degradation
RER_36780	PWY-6333	acetaldehyde biosynthesis I
RER_36780	PWY-6342	noradrenaline and adrenaline degradation
RER_36780	PWY-6587	pyruvate fermentation to ethanol III
RER_36780	PWY-6802	salidroside biosynthesis
RER_36780	PWY-6871	3-methylbutanol biosynthesis
RER_36780	PWY-7013	L-1,2-propanediol degradation
RER_36780	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RER_36780	PWY-7118	chitin degradation to ethanol
RER_36780	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RER_36780	PWY-7557	dehydrodiconiferyl alcohol degradation
RER_37290	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RER_37460	PWY-6683	sulfate reduction III (assimilatory)
RER_37480	PWY-5278	sulfite oxidation III
RER_37480	PWY-5340	sulfate activation for sulfonation
RER_37480	PWY-6683	sulfate reduction III (assimilatory)
RER_37480	PWY-6932	selenate reduction
RER_37490	PWY-5278	sulfite oxidation III
RER_37490	PWY-5340	sulfate activation for sulfonation
RER_37490	PWY-6683	sulfate reduction III (assimilatory)
RER_37490	PWY-6932	selenate reduction
RER_37500	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RER_37600	PWY-723	alkylnitronates degradation
RER_37760	PWY-5381	pyridine nucleotide cycling (plants)
RER_37760	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
RER_37860	PWY-6409	pyoverdine I biosynthesis
RER_37860	PWY-6562	norspermidine biosynthesis
RER_37860	PWY-761	rhizobactin 1021 biosynthesis
RER_37970	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RER_37970	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
RER_37970	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RER_37970	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RER_37970	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
RER_37970	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RER_37970	PWY-7205	CMP phosphorylation
RER_37970	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RER_37970	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RER_37970	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RER_37970	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RER_37970	PWY-7224	purine deoxyribonucleosides salvage
RER_37970	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RER_37970	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RER_37990	PWY-2161	folate polyglutamylation
RER_38080	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RER_38090	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RER_38090	PWY-6416	quinate degradation II
RER_38090	PWY-6707	gallate biosynthesis
RER_38190	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RER_38190	PWY-5723	Rubisco shunt
RER_38270	PWY-5692	allantoin degradation to glyoxylate II
RER_38270	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
RER_38310	PWY-5022	4-aminobutanoate degradation V
RER_38310	PWY-6728	methylaspartate cycle
RER_38310	PWY-7126	ethylene biosynthesis IV
RER_38440	PWY-381	nitrate reduction II (assimilatory)
RER_38440	PWY-5675	nitrate reduction V (assimilatory)
RER_38440	PWY-6549	L-glutamine biosynthesis III
RER_38440	PWY-6963	ammonia assimilation cycle I
RER_38440	PWY-6964	ammonia assimilation cycle II
RER_38610	PWY-2941	L-lysine biosynthesis II
RER_38610	PWY-2942	L-lysine biosynthesis III
RER_38610	PWY-5097	L-lysine biosynthesis VI
RER_38670	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RER_38720	PWY-6012	acyl carrier protein metabolism I
RER_38720	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
RER_38730	PWY-4381	fatty acid biosynthesis initiation I
RER_38730	PWY-5142	acyl-ACP thioesterase pathway
RER_38730	PWY-5147	oleate biosynthesis I (plants)
RER_38730	PWY-5366	palmitoleate biosynthesis II (plants and bacteria)
RER_38730	PWY-5367	petroselinate biosynthesis
RER_38730	PWY-5966	fatty acid biosynthesis initiation II
RER_38730	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RER_38730	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RER_38730	PWY-5989	stearate biosynthesis II (bacteria and plants)
RER_38730	PWY-5994	palmitate biosynthesis I (animals and fungi)
RER_38730	PWY-6113	superpathway of mycolate biosynthesis
RER_38730	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RER_38730	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RER_38730	PWY-6799	fatty acid biosynthesis (plant mitochondria)
RER_38730	PWY-7096	triclosan resistance
RER_38730	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RER_38730	PWYG-321	mycolate biosynthesis
RER_38750	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RER_38750	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RER_38780	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
RER_38820	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RER_38850	PWY-5381	pyridine nucleotide cycling (plants)
RER_38880	PWY-5941	glycogen degradation II (eukaryotic)
RER_38880	PWY-622	starch biosynthesis
RER_38880	PWY-6731	starch degradation III
RER_38880	PWY-6737	starch degradation V
RER_38880	PWY-7238	sucrose biosynthesis II
RER_38900	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
RER_38900	PWY-622	starch biosynthesis
RER_38950	PWY-5743	3-hydroxypropanoate cycle
RER_38950	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RER_38950	PWY-6728	methylaspartate cycle
RER_38950	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RER_39010	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RER_39010	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RER_39020	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RER_39020	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RER_39020	PWY-6268	adenosylcobalamin salvage from cobalamin
RER_39020	PWY-6269	adenosylcobalamin salvage from cobinamide II
RER_39050	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RER_39070	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RER_39130	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RER_39130	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RER_39130	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RER_39140	PWY-1622	formaldehyde assimilation I (serine pathway)
RER_39140	PWY-181	photorespiration
RER_39140	PWY-2161	folate polyglutamylation
RER_39140	PWY-2201	folate transformations I
RER_39140	PWY-3661	glycine betaine degradation I
RER_39140	PWY-3661-1	glycine betaine degradation II (mammalian)
RER_39140	PWY-3841	folate transformations II
RER_39140	PWY-5497	purine nucleobases degradation II (anaerobic)
RER_39190	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RER_39200	PWY-702	L-methionine biosynthesis II
RER_39230	PWY-2941	L-lysine biosynthesis II
RER_39230	PWY-2942	L-lysine biosynthesis III
RER_39230	PWY-5097	L-lysine biosynthesis VI
RER_39360	PWY-5278	sulfite oxidation III
RER_39360	PWY-5340	sulfate activation for sulfonation
RER_39360	PWY-6683	sulfate reduction III (assimilatory)
RER_39360	PWY-6932	selenate reduction
RER_39370	PWY-5278	sulfite oxidation III
RER_39370	PWY-5340	sulfate activation for sulfonation
RER_39370	PWY-6683	sulfate reduction III (assimilatory)
RER_39370	PWY-6932	selenate reduction
RER_39490	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RER_39490	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RER_39490	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RER_39550	PWY-5642	2,4-dinitrotoluene degradation
RER_39550	PWY-6373	acrylate degradation
RER_39570	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RER_39570	PWY-6855	chitin degradation I (archaea)
RER_39570	PWY-6906	chitin derivatives degradation
RER_39580	PWY-6906	chitin derivatives degradation
RER_39580	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
RER_39580	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
RER_39610	PWY-7310	D-glucosaminate degradation
RER_39620	PWY-7310	D-glucosaminate degradation
RER_39840	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RER_39860	PWY-5350	thiosulfate disproportionation III (rhodanese)
RER_40200	PWY-6167	flavin biosynthesis II (archaea)
RER_40200	PWY-6168	flavin biosynthesis III (fungi)
RER_40570	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RER_40770	PWY-4381	fatty acid biosynthesis initiation I
RER_40770	PWY-5743	3-hydroxypropanoate cycle
RER_40770	PWY-5744	glyoxylate assimilation
RER_40770	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RER_40770	PWY-6679	jadomycin biosynthesis
RER_40770	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RER_41000	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RER_41000	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RER_41050	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RER_41070	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RER_41070	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RER_41080	PWY-6610	adenine and adenosine salvage IV
RER_41120	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RER_41120	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RER_41160	PWY-4061	glutathione-mediated detoxification I
RER_41160	PWY-6842	glutathione-mediated detoxification II
RER_41160	PWY-7112	4-hydroxy-2-nonenal detoxification
RER_41160	PWY-7533	gliotoxin biosynthesis
RER_41220	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RER_41600	PWY-622	starch biosynthesis
RER_41610	PWY-622	starch biosynthesis
RER_41670	PWY-6614	tetrahydrofolate biosynthesis
RER_41680	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RER_41680	PWY-5143	long-chain fatty acid activation
RER_41680	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
RER_41680	PWY-5885	wax esters biosynthesis II
RER_41680	PWY-5972	stearate biosynthesis I (animals and fungi)
RER_41680	PWY-5995	linoleate biosynthesis I (plants)
RER_41680	PWY-6000	&gamma;-linolenate biosynthesis II (animals)
RER_41680	PWY-6001	linoleate biosynthesis II (animals)
RER_41680	PWY-6803	phosphatidylcholine acyl editing
RER_41680	PWY-6873	long chain fatty acid ester synthesis for microdiesel production
RER_41680	PWY-6920	6-gingerol analog biosynthesis
RER_41680	PWY-6951	RER_41680
RER_41680	PWY-7033	alkane biosynthesis II
RER_41680	PWY-7035	(<i>Z</i>)-9-tricosene biosynthesis
RER_41680	PWY-7049	icosapentaenoate biosynthesis II (metazoa)
RER_41680	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
RER_41680	PWY-7094	fatty acid salvage
RER_41680	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
RER_41830	PWY-5198	factor 420 biosynthesis
RER_41870	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RER_41870	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RER_41950	PWY-7158	L-phenylalanine degradation V
RER_42040	PWY-5497	purine nucleobases degradation II (anaerobic)
RER_42040	PWY-6606	guanosine nucleotides degradation II
RER_42040	PWY-6608	guanosine nucleotides degradation III
RER_42040	PWY-7442	drosopterin and aurodrosopterin biosynthesis
RER_42110	PWY-5392	reductive TCA cycle II
RER_42110	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RER_42110	PWY-5690	TCA cycle II (plants and fungi)
RER_42110	PWY-5913	TCA cycle VI (obligate autotrophs)
RER_42110	PWY-6728	methylaspartate cycle
RER_42110	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RER_42110	PWY-7254	TCA cycle VII (acetate-producers)
RER_42110	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RER_42180	PWY-5481	pyruvate fermentation to lactate
RER_42180	PWY-6901	superpathway of glucose and xylose degradation
RER_42340	PWY-7560	methylerythritol phosphate pathway II
RER_42390	PWY-5484	glycolysis II (from fructose 6-phosphate)
RER_42400	PWY-5392	reductive TCA cycle II
RER_42400	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RER_42400	PWY-5690	TCA cycle II (plants and fungi)
RER_42400	PWY-5913	TCA cycle VI (obligate autotrophs)
RER_42400	PWY-6728	methylaspartate cycle
RER_42400	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RER_42400	PWY-7254	TCA cycle VII (acetate-producers)
RER_42400	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RER_42510	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RER_42520	PWY-1622	formaldehyde assimilation I (serine pathway)
RER_42520	PWY-181	photorespiration
RER_42520	PWY-2161	folate polyglutamylation
RER_42520	PWY-2201	folate transformations I
RER_42520	PWY-3661	glycine betaine degradation I
RER_42520	PWY-3661-1	glycine betaine degradation II (mammalian)
RER_42520	PWY-3841	folate transformations II
RER_42520	PWY-5497	purine nucleobases degradation II (anaerobic)
RER_42540	PWY-3961	phosphopantothenate biosynthesis II
RER_42660	PWY-801	L-homocysteine and L-cysteine interconversion
RER_42830	PWY-1042	glycolysis IV (plant cytosol)
RER_42830	PWY-1622	formaldehyde assimilation I (serine pathway)
RER_42830	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RER_42830	PWY-5484	glycolysis II (from fructose 6-phosphate)
RER_42830	PWY-5723	Rubisco shunt
RER_42830	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RER_42830	PWY-6886	1-butanol autotrophic biosynthesis
RER_42830	PWY-6901	superpathway of glucose and xylose degradation
RER_42830	PWY-7003	glycerol degradation to butanol
RER_42830	PWY-7124	ethylene biosynthesis V (engineered)
RER_42830	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RER_43070	PWY-6012	acyl carrier protein metabolism I
RER_43070	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
RER_43100	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RER_43140	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
RER_43140	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
RER_43200	PWY-6840	homoglutathione biosynthesis
RER_43200	PWY-7255	ergothioneine biosynthesis I (bacteria)
RER_43310	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RER_43310	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RER_43520	PWY-7560	methylerythritol phosphate pathway II
RER_43750	PWY-4202	arsenate detoxification I (glutaredoxin)
RER_43750	PWY-4621	arsenate detoxification II (glutaredoxin)
RER_43760	PWY-4981	L-proline biosynthesis II (from arginine)
RER_43880	PWY-6823	molybdenum cofactor biosynthesis
RER_44160	PWY-43	putrescine biosynthesis II
RER_44230	PWY-6123	inosine-5'-phosphate biosynthesis I
RER_44230	PWY-6124	inosine-5'-phosphate biosynthesis II
RER_44230	PWY-7234	inosine-5'-phosphate biosynthesis III
RER_44240	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RER_44240	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
RER_44280	PWY-5392	reductive TCA cycle II
RER_44280	PWY-5537	pyruvate fermentation to acetate V
RER_44280	PWY-5538	pyruvate fermentation to acetate VI
RER_44280	PWY-5690	TCA cycle II (plants and fungi)
RER_44280	PWY-5913	TCA cycle VI (obligate autotrophs)
RER_44280	PWY-6728	methylaspartate cycle
RER_44280	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RER_44280	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RER_44290	PWY-5392	reductive TCA cycle II
RER_44290	PWY-5537	pyruvate fermentation to acetate V
RER_44290	PWY-5538	pyruvate fermentation to acetate VI
RER_44290	PWY-5690	TCA cycle II (plants and fungi)
RER_44290	PWY-5913	TCA cycle VI (obligate autotrophs)
RER_44290	PWY-6728	methylaspartate cycle
RER_44290	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RER_44290	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RER_44330	PWY-3461	L-tyrosine biosynthesis II
RER_44330	PWY-3462	L-phenylalanine biosynthesis II
RER_44330	PWY-6120	L-tyrosine biosynthesis III
RER_44330	PWY-6627	salinosporamide A biosynthesis
RER_44350	PWY-3801	sucrose degradation II (sucrose synthase)
RER_44350	PWY-5054	sorbitol biosynthesis I
RER_44350	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
RER_44350	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RER_44350	PWY-5659	GDP-mannose biosynthesis
RER_44350	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RER_44350	PWY-621	sucrose degradation III (sucrose invertase)
RER_44350	PWY-622	starch biosynthesis
RER_44350	PWY-6531	mannitol cycle
RER_44350	PWY-6981	chitin biosynthesis
RER_44350	PWY-7238	sucrose biosynthesis II
RER_44350	PWY-7347	sucrose biosynthesis III
RER_44350	PWY-7385	1,3-propanediol biosynthesis (engineered)
RER_44600	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
RER_44610	PWY-3841	folate transformations II
RER_44610	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RER_44610	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RER_44610	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RER_44610	PWY-7199	pyrimidine deoxyribonucleosides salvage
RER_44610	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RER_44620	PWY-3841	folate transformations II
RER_44620	PWY-6614	tetrahydrofolate biosynthesis
RER_44700	PWY-6840	homoglutathione biosynthesis
RER_44700	PWY-7255	ergothioneine biosynthesis I (bacteria)
RER_44740	PWY-4261	glycerol degradation I
RER_44900	PWY-2941	L-lysine biosynthesis II
RER_44900	PWY-2942	L-lysine biosynthesis III
RER_44900	PWY-5097	L-lysine biosynthesis VI
RER_45340	PWY-6857	retinol biosynthesis
RER_45420	PWY-3561	choline biosynthesis III
RER_45420	PWY-7039	phosphatidate metabolism, as a signaling molecule
RER_45550	PWY-3781	aerobic respiration I (cytochrome c)
RER_45550	PWY-4521	arsenite oxidation I (respiratory)
RER_45550	PWY-6692	Fe(II) oxidation
RER_45550	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RER_45670	PWY-4381	fatty acid biosynthesis initiation I
RER_45670	PWY-5743	3-hydroxypropanoate cycle
RER_45670	PWY-5744	glyoxylate assimilation
RER_45670	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RER_45670	PWY-6679	jadomycin biosynthesis
RER_45670	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RER_45860	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RER_45860	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RER_45860	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RER_45860	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RER_45940	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
RER_45940	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RER_46040	PWY-4261	glycerol degradation I
RER_46040	PWY-6118	glycerol-3-phosphate shuttle
RER_46040	PWY-6952	glycerophosphodiester degradation
RER_46050	PWY-4261	glycerol degradation I
RER_46150	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RER_46150	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RER_46490	PWY-7533	gliotoxin biosynthesis
RER_46930	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RER_46990	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RER_46990	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
RER_46990	PWY-6164	3-dehydroquinate biosynthesis I
RER_47040	PWY-6853	ethylene biosynthesis II (microbes)
RER_47050	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
RER_47050	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RER_47140	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RER_47140	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RER_47140	PWY-6936	seleno-amino acid biosynthesis
RER_47140	PWY-702	L-methionine biosynthesis II
RER_47530	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RER_47530	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RER_47590	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
RER_47900	PWY-5147	oleate biosynthesis I (plants)
RER_47980	PWY-5704	urea degradation II
RER_47990	PWY-5704	urea degradation II
RER_48000	PWY-5704	urea degradation II
RER_48100	PWY-5350	thiosulfate disproportionation III (rhodanese)
RER_48240	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RER_48240	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RER_48240	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RER_48280	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RER_48280	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RER_48280	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RER_48280	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RER_48320	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RER_48320	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RER_48320	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RER_48670	PWY-6854	ethylene biosynthesis III (microbes)
RER_48770	PWY-6857	retinol biosynthesis
RER_48880	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RER_48880	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RER_49340	PWY-6857	retinol biosynthesis
RER_49900	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
RER_49900	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
RER_50000	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RER_50070	PWY-1361	benzoyl-CoA degradation I (aerobic)
RER_50070	PWY-5109	2-methylbutanoate biosynthesis
RER_50070	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RER_50070	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RER_50070	PWY-5177	glutaryl-CoA degradation
RER_50070	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RER_50070	PWY-6435	4-hydroxybenzoate biosynthesis V
RER_50070	PWY-6583	pyruvate fermentation to butanol I
RER_50070	PWY-6863	pyruvate fermentation to hexanol
RER_50070	PWY-6883	pyruvate fermentation to butanol II
RER_50070	PWY-6944	androstenedione degradation
RER_50070	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RER_50070	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RER_50070	PWY-7007	methyl ketone biosynthesis
RER_50070	PWY-7046	4-coumarate degradation (anaerobic)
RER_50070	PWY-7094	fatty acid salvage
RER_50070	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RER_50070	PWY-735	jasmonic acid biosynthesis
RER_50070	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RER_50150	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RER_50150	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RER_50300	PWY-5747	2-methylcitrate cycle II
RER_50540	PWY-5101	L-isoleucine biosynthesis II
RER_50540	PWY-5103	L-isoleucine biosynthesis III
RER_50540	PWY-5104	L-isoleucine biosynthesis IV
RER_50540	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RER_50630	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RER_50890	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RER_50890	PWY-5143	long-chain fatty acid activation
RER_50890	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
RER_50890	PWY-5885	wax esters biosynthesis II
RER_50890	PWY-5972	stearate biosynthesis I (animals and fungi)
RER_50890	PWY-5995	linoleate biosynthesis I (plants)
RER_50890	PWY-6000	&gamma;-linolenate biosynthesis II (animals)
RER_50890	PWY-6001	linoleate biosynthesis II (animals)
RER_50890	PWY-6803	phosphatidylcholine acyl editing
RER_50890	PWY-6873	long chain fatty acid ester synthesis for microdiesel production
RER_50890	PWY-6920	6-gingerol analog biosynthesis
RER_50890	PWY-6951	RER_50890
RER_50890	PWY-7033	alkane biosynthesis II
RER_50890	PWY-7035	(<i>Z</i>)-9-tricosene biosynthesis
RER_50890	PWY-7049	icosapentaenoate biosynthesis II (metazoa)
RER_50890	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
RER_50890	PWY-7094	fatty acid salvage
RER_50890	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
RER_51110	PWY-381	nitrate reduction II (assimilatory)
RER_51110	PWY-5675	nitrate reduction V (assimilatory)
RER_51110	PWY-6549	L-glutamine biosynthesis III
RER_51110	PWY-6963	ammonia assimilation cycle I
RER_51110	PWY-6964	ammonia assimilation cycle II
RER_51220	PWY-7533	gliotoxin biosynthesis
RER_51250	PWY-5022	4-aminobutanoate degradation V
RER_51250	PWY-6728	methylaspartate cycle
RER_51250	PWY-7126	ethylene biosynthesis IV
RER_51300	PWY-5028	L-histidine degradation II
RER_51300	PWY-5030	L-histidine degradation III
RER_51320	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RER_51320	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RER_51340	PWY-5028	L-histidine degradation II
RER_51340	PWY-5030	L-histidine degradation III
RER_51350	PWY-5028	L-histidine degradation II
RER_51350	PWY-5030	L-histidine degradation III
RER_51480	PWY-5101	L-isoleucine biosynthesis II
RER_51480	PWY-5103	L-isoleucine biosynthesis III
RER_51480	PWY-5104	L-isoleucine biosynthesis IV
RER_51480	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RER_51650	PWY-5344	L-homocysteine biosynthesis
RER_51650	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RER_51820	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RER_51820	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RER_51900	PWY-5741	ethylmalonyl-CoA pathway
RER_51900	PWY-5744	glyoxylate assimilation
RER_51900	PWY-6728	methylaspartate cycle
RER_51970	PWY-723	alkylnitronates degradation
RER_52880	PWY-6123	inosine-5'-phosphate biosynthesis I
RER_52880	PWY-6124	inosine-5'-phosphate biosynthesis II
RER_52880	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RER_52880	PWY-7234	inosine-5'-phosphate biosynthesis III
RER_52890	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
RER_53140	PWY-5530	sorbitol biosynthesis II
RER_53140	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RER_53170	PWY-5667	CDP-diacylglycerol biosynthesis I
RER_53170	PWY-5981	CDP-diacylglycerol biosynthesis III
RER_53580	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RER_53580	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RER_53580	PWY-6269	adenosylcobalamin salvage from cobinamide II
RER_53630	PWY-6967	methylamine degradation I
RER_53760	PWY-6857	retinol biosynthesis
RER_53830	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RER_53830	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RER_54160	PWY-3162	L-tryptophan degradation V (side chain pathway)
RER_54160	PWY-5057	L-valine degradation II
RER_54160	PWY-5076	L-leucine degradation III
RER_54160	PWY-5078	L-isoleucine degradation II
RER_54160	PWY-5079	L-phenylalanine degradation III
RER_54160	PWY-5082	L-methionine degradation III
RER_54160	PWY-5480	pyruvate fermentation to ethanol I
RER_54160	PWY-5486	pyruvate fermentation to ethanol II
RER_54160	PWY-5751	phenylethanol biosynthesis
RER_54160	PWY-6028	acetoin degradation
RER_54160	PWY-6313	serotonin degradation
RER_54160	PWY-6333	acetaldehyde biosynthesis I
RER_54160	PWY-6342	noradrenaline and adrenaline degradation
RER_54160	PWY-6587	pyruvate fermentation to ethanol III
RER_54160	PWY-6802	salidroside biosynthesis
RER_54160	PWY-6871	3-methylbutanol biosynthesis
RER_54160	PWY-7013	L-1,2-propanediol degradation
RER_54160	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RER_54160	PWY-7118	chitin degradation to ethanol
RER_54160	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RER_54160	PWY-7557	dehydrodiconiferyl alcohol degradation
RER_54210	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
RER_54360	PWY-6164	3-dehydroquinate biosynthesis I
RER_54370	PWY-4381	fatty acid biosynthesis initiation I
RER_54640	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
RER_54640	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
RER_54650	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
RER_54650	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
RER_54750	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RER_54750	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RER_55290	PWY-6857	retinol biosynthesis
RER_55310	PWY-3781	aerobic respiration I (cytochrome c)
RER_55310	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RER_55310	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RER_55310	PWY-5690	TCA cycle II (plants and fungi)
RER_55310	PWY-6728	methylaspartate cycle
RER_55310	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RER_55310	PWY-7254	TCA cycle VII (acetate-producers)
RER_55310	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RER_55320	PWY-3781	aerobic respiration I (cytochrome c)
RER_55320	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RER_55320	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RER_55320	PWY-5690	TCA cycle II (plants and fungi)
RER_55320	PWY-6728	methylaspartate cycle
RER_55320	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RER_55320	PWY-7254	TCA cycle VII (acetate-producers)
RER_55320	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RER_55400	PWY-6317	galactose degradation I (Leloir pathway)
RER_55400	PWY-6527	stachyose degradation
RER_55410	PWY-3821	galactose degradation III
RER_55410	PWY-6317	galactose degradation I (Leloir pathway)
RER_55410	PWY-6527	stachyose degradation
RER_55450	PWY-1341	phenylacetate degradation II (anaerobic)
RER_55450	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
RER_55520	PWY-1361	benzoyl-CoA degradation I (aerobic)
RER_55520	PWY-5109	2-methylbutanoate biosynthesis
RER_55520	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RER_55520	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RER_55520	PWY-5177	glutaryl-CoA degradation
RER_55520	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RER_55520	PWY-6435	4-hydroxybenzoate biosynthesis V
RER_55520	PWY-6583	pyruvate fermentation to butanol I
RER_55520	PWY-6863	pyruvate fermentation to hexanol
RER_55520	PWY-6883	pyruvate fermentation to butanol II
RER_55520	PWY-6944	androstenedione degradation
RER_55520	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RER_55520	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RER_55520	PWY-7007	methyl ketone biosynthesis
RER_55520	PWY-7046	4-coumarate degradation (anaerobic)
RER_55520	PWY-7094	fatty acid salvage
RER_55520	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RER_55520	PWY-735	jasmonic acid biosynthesis
RER_55520	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RER_56380	PWY-5392	reductive TCA cycle II
RER_56380	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RER_56380	PWY-5690	TCA cycle II (plants and fungi)
RER_56380	PWY-5913	TCA cycle VI (obligate autotrophs)
RER_56380	PWY-6728	methylaspartate cycle
RER_56380	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RER_56380	PWY-7254	TCA cycle VII (acetate-producers)
RER_56380	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RER_56680	PWY-1361	benzoyl-CoA degradation I (aerobic)
RER_56680	PWY-5109	2-methylbutanoate biosynthesis
RER_56680	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RER_56680	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RER_56680	PWY-5177	glutaryl-CoA degradation
RER_56680	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RER_56680	PWY-6435	4-hydroxybenzoate biosynthesis V
RER_56680	PWY-6583	pyruvate fermentation to butanol I
RER_56680	PWY-6863	pyruvate fermentation to hexanol
RER_56680	PWY-6883	pyruvate fermentation to butanol II
RER_56680	PWY-6944	androstenedione degradation
RER_56680	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RER_56680	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RER_56680	PWY-7007	methyl ketone biosynthesis
RER_56680	PWY-7046	4-coumarate degradation (anaerobic)
RER_56680	PWY-7094	fatty acid salvage
RER_56680	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RER_56680	PWY-735	jasmonic acid biosynthesis
RER_56680	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RER_56710	PWY-6683	sulfate reduction III (assimilatory)
RER_56870	PWY-2941	L-lysine biosynthesis II
RER_56870	PWY-2942	L-lysine biosynthesis III
RER_56870	PWY-5097	L-lysine biosynthesis VI
RER_57060	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RER_57060	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RER_57060	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
RER_57110	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RER_57160	PWY-6857	retinol biosynthesis
RER_57260	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RER_57260	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RER_57320	PWY-6857	retinol biosynthesis
RER_57480	PWY-6840	homoglutathione biosynthesis
RER_57480	PWY-7255	ergothioneine biosynthesis I (bacteria)
RER_57510	PWY-5506	methanol oxidation to formaldehyde IV
RER_57570	PWY-5162	2-oxopentenoate degradation
RER_57570	PWY-5436	L-threonine degradation IV
RER_57570	PWY-5480	pyruvate fermentation to ethanol I
RER_57570	PWY-6587	pyruvate fermentation to ethanol III
RER_57570	PWY-7085	triethylamine degradation
RER_57570	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
RER_57580	PWY-5162	2-oxopentenoate degradation
RER_57840	PWY-723	alkylnitronates degradation
RER_57950	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RER_57960	PWY-4381	fatty acid biosynthesis initiation I
RER_57960	PWY-5743	3-hydroxypropanoate cycle
RER_57960	PWY-5744	glyoxylate assimilation
RER_57960	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RER_57960	PWY-6679	jadomycin biosynthesis
RER_57960	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RER_57970	PWY-4381	fatty acid biosynthesis initiation I
RER_57970	PWY-5743	3-hydroxypropanoate cycle
RER_57970	PWY-5744	glyoxylate assimilation
RER_57970	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RER_57970	PWY-6679	jadomycin biosynthesis
RER_57970	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RER_58110	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RER_58230	PWY-723	alkylnitronates degradation
RER_58450	PWY-2301	<i>myo</i>-inositol biosynthesis
RER_58450	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
RER_58450	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
RER_58450	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
RER_58450	PWY-6664	di-myo-inositol phosphate biosynthesis
RER_58810	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RER_58830	PWY-7183	pyrimidine nucleobases salvage I
RER_58860	PWY-4381	fatty acid biosynthesis initiation I
RER_58860	PWY-5743	3-hydroxypropanoate cycle
RER_58860	PWY-5744	glyoxylate assimilation
RER_58860	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RER_58860	PWY-6679	jadomycin biosynthesis
RER_58860	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RER_58950	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RER_59230	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RER_59240	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
RER_59240	PWY-581	indole-3-acetate biosynthesis II
RER_59240	PWY-7308	acrylonitrile degradation I
RER_59250	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
RER_59250	PWY-581	indole-3-acetate biosynthesis II
RER_59250	PWY-7308	acrylonitrile degradation I
RER_59360	PWY-5647	2-nitrobenzoate degradation I
RER_59360	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
RER_59360	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
RER_59360	PWY-6505	L-tryptophan degradation XII (Geobacillus)
RER_59410	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RER_59410	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RER_59510	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
RER_59510	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
RER_59680	PWY-7425	2-chloroacrylate degradation I
RER_59720	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RER_59720	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RER_59730	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
RER_59730	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
RER_59830	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
RER_59830	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
