Rfer_0001 repressor IPR010921 - Trp repressor/replication initiator Rfer_0001 replication IPR010921 - Trp repressor/replication initiator Rfer_0001 replication IPR020591 - Chromosomal replication control, initiator DnaA-like Rfer_0001 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0001 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0001 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0001 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0003 iia IPR001241 - DNA topoisomerase, type IIA Rfer_0003 topoisomerase IPR001241 - DNA topoisomerase, type IIA Rfer_0003 dna IPR001241 - DNA topoisomerase, type IIA Rfer_0003 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0003 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0003 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0003 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0003 dna IPR013760 - DNA topoisomerase, type IIA-like domain Rfer_0003 topoisomerase IPR013760 - DNA topoisomerase, type IIA-like domain Rfer_0003 fold IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_0003 ribosomal IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_0005 cyclase IPR029787 - Nucleotide cyclase Rfer_0005 nucleotide IPR029787 - Nucleotide cyclase Rfer_0007 acyl-coa IPR016181 - Acyl-CoA N-acyltransferase Rfer_0010 fold IPR012336 - Thioredoxin-like fold Rfer_0013 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0013 transcription IPR028978 - Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain Rfer_0014 lyase IPR000362 - Fumarate lyase family Rfer_0015 symporter IPR001898 - Sodium/sulphate symporter Rfer_0015 sodium IPR001898 - Sodium/sulphate symporter Rfer_0016 transcriptional IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_0016 c-terminal IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_0016 regulator IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_0018 dehydrogenase IPR002085 - Alcohol dehydrogenase superfamily, zinc-type Rfer_0020 transmembrane IPR002549 - Uncharacterised protein family UPF0118 Rfer_0022 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0022 fold IPR014710 - RmlC-like jelly roll fold Rfer_0023 dna-binding IPR009061 - DNA binding domain, putative Rfer_0023 putative IPR009061 - DNA binding domain, putative Rfer_0024 atpase IPR001757 - Cation-transporting P-type ATPase Rfer_0024 heavy IPR006121 - Heavy metal-associated domain, HMA Rfer_0028 helicase IPR014001 - Helicase, superfamily 1/2, ATP-binding domain Rfer_0028 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0028 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0028 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0028 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0032 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_0035 binding IPR025501 - ATP binding protein MinD Rfer_0035 atp IPR025501 - ATP binding protein MinD Rfer_0035 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0035 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0035 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0035 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0036 c-terminal IPR016098 - Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal Rfer_0036 inhibitor IPR016098 - Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal Rfer_0037 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_0039 fold IPR012336 - Thioredoxin-like fold Rfer_0040 cytochrome IPR003567 - Cytochrome c-type biogenesis protein Rfer_0040 c-type IPR003567 - Cytochrome c-type biogenesis protein Rfer_0040 biogenesis IPR003567 - Cytochrome c-type biogenesis protein Rfer_0044 cytochrome IPR003544 - Cytochrome c-type biogenesis protein CcmB Rfer_0044 biogenesis IPR003544 - Cytochrome c-type biogenesis protein CcmB Rfer_0044 c-type IPR003544 - Cytochrome c-type biogenesis protein CcmB Rfer_0045 abc IPR003439 - ABC transporter-like Rfer_0045 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0045 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0045 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0045 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0047 c-terminal-like IPR010987 - Glutathione S-transferase, C-terminal-like Rfer_0047 fold IPR012336 - Thioredoxin-like fold Rfer_0048 dehydrogenase IPR016161 - Aldehyde/histidinol dehydrogenase Rfer_0049 trna IPR002218 - Glucose-inhibited division protein A-related Rfer_0049 enzyme IPR002218 - Glucose-inhibited division protein A-related Rfer_0049 modification IPR002218 - Glucose-inhibited division protein A-related Rfer_0050 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_0051 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0051 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0051 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0051 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0052 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_0052 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_0052 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_0052 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_0054 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_0056 fold IPR013783 - Immunoglobulin-like fold Rfer_0058 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_0059 cytochrome IPR011031 - Multihaem cytochrome Rfer_0060 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0060 fold IPR014710 - RmlC-like jelly roll fold Rfer_0062 dehydrogenase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_0062 acyl-coa IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_0062 oxidase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_0062 c-terminal IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_0063 transcriptional IPR008988 - Transcriptional repressor, C-terminal Rfer_0063 c-terminal IPR008988 - Transcriptional repressor, C-terminal Rfer_0063 repressor IPR008988 - Transcriptional repressor, C-terminal Rfer_0064 binding IPR006073 - GTP binding domain Rfer_0064 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0064 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0064 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0064 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0067 fold IPR012336 - Thioredoxin-like fold Rfer_0069 permease IPR006043 - Xanthine/uracil/vitamin C permease Rfer_0078 synthase IPR022924 - Cardiolipin synthase Rfer_0084 oxidoreductase IPR001433 - Oxidoreductase FAD/NAD(P)-binding Rfer_0084 beta-barrel IPR017938 - Riboflavin synthase-like beta-barrel Rfer_0084 synthase-like IPR017938 - Riboflavin synthase-like beta-barrel Rfer_0086 peptidase IPR000994 - Peptidase M24, structural domain Rfer_0086 aminopeptidase IPR029149 - Creatinase/Aminopeptidase P/Spt16, N-terminal Rfer_0087 fold IPR012336 - Thioredoxin-like fold Rfer_0088 enzyme IPR008279 - PEP-utilising enzyme, mobile domain Rfer_0088 subdomain IPR013816 - ATP-grasp fold, subdomain 2 Rfer_0088 fold IPR013816 - ATP-grasp fold, subdomain 2 Rfer_0088 kinase-like IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_0088 pyruvate IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_0089 peptidase IPR002410 - Peptidase S33 Rfer_0089 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_0089 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_0089 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_0089 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_0091 fold IPR004039 - Rubredoxin-type fold Rfer_0093 phosphate IPR002505 - Phosphate acetyl/butaryl transferase Rfer_0093 transferase IPR002505 - Phosphate acetyl/butaryl transferase Rfer_0094 ribonuclease IPR000026 - Guanine-specific ribonuclease N1/T1 Rfer_0096 rna IPR001737 - Ribosomal RNA adenine methylase transferase Rfer_0096 ribosomal IPR001737 - Ribosomal RNA adenine methylase transferase Rfer_0096 methyltransferase IPR001737 - Ribosomal RNA adenine methylase transferase Rfer_0096 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_0097 factor IPR027304 - Trigger factor/SurA domain Rfer_0099 kinase-like IPR011009 - Protein kinase-like domain Rfer_0105 epsilon IPR001469 - ATPase, F1 complex, delta/epsilon subunit Rfer_0105 delta IPR001469 - ATPase, F1 complex, delta/epsilon subunit Rfer_0105 synthase IPR001469 - ATPase, F1 complex, delta/epsilon subunit Rfer_0105 complex IPR001469 - ATPase, F1 complex, delta/epsilon subunit Rfer_0105 atp IPR001469 - ATPase, F1 complex, delta/epsilon subunit Rfer_0106 alpha IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Rfer_0106 atpase IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Rfer_0106 beta IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Rfer_0106 complex IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Rfer_0106 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0106 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0106 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0106 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0107 synthase IPR000131 - ATPase, F1 complex, gamma subunit Rfer_0107 atp IPR000131 - ATPase, F1 complex, gamma subunit Rfer_0107 complex IPR000131 - ATPase, F1 complex, gamma subunit Rfer_0107 gamma IPR000131 - ATPase, F1 complex, gamma subunit Rfer_0108 alpha IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Rfer_0108 atpase IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Rfer_0108 beta IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Rfer_0108 complex IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Rfer_0108 atp IPR005294 - ATPase, F1 complex, alpha subunit Rfer_0108 alpha IPR005294 - ATPase, F1 complex, alpha subunit Rfer_0108 synthase IPR005294 - ATPase, F1 complex, alpha subunit Rfer_0108 complex IPR005294 - ATPase, F1 complex, alpha subunit Rfer_0108 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0108 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0108 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0108 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0110 bacterial IPR002146 - ATPase, F0 complex, subunit B/B', bacterial/chloroplast Rfer_0110 synthase IPR002146 - ATPase, F0 complex, subunit B/B', bacterial/chloroplast Rfer_0110 complex IPR002146 - ATPase, F0 complex, subunit B/B', bacterial/chloroplast Rfer_0110 atp IPR002146 - ATPase, F0 complex, subunit B/B', bacterial/chloroplast Rfer_0111 synthase IPR000454 - ATPase, F0 complex, subunit C Rfer_0111 atp IPR000454 - ATPase, F0 complex, subunit C Rfer_0111 complex IPR000454 - ATPase, F0 complex, subunit C Rfer_0112 synthase IPR000568 - ATPase, F0 complex, subunit A Rfer_0112 complex IPR000568 - ATPase, F0 complex, subunit A Rfer_0112 atp IPR000568 - ATPase, F0 complex, subunit A Rfer_0114 acyl-coa IPR016181 - Acyl-CoA N-acyltransferase Rfer_0115 fold IPR012336 - Thioredoxin-like fold Rfer_0116 cyclase IPR029787 - Nucleotide cyclase Rfer_0116 nucleotide IPR029787 - Nucleotide cyclase Rfer_0117 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0117 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0117 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0117 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0119 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0121 dehydrogenase IPR002085 - Alcohol dehydrogenase superfamily, zinc-type Rfer_0122 putative IPR000801 - Putative esterase Rfer_0122 esterase IPR000801 - Putative esterase Rfer_0122 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_0122 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_0122 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_0122 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_0123 transporter IPR001851 - ABC transporter, permease Rfer_0123 abc IPR001851 - ABC transporter, permease Rfer_0123 permease IPR001851 - ABC transporter, permease Rfer_0124 abc IPR003439 - ABC transporter-like Rfer_0124 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0124 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0124 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0124 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0125 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_0125 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_0125 binding IPR028082 - Periplasmic binding protein-like I Rfer_0127 arginine IPR024946 - Arginine repressor C-terminal-like domain Rfer_0127 repressor IPR024946 - Arginine repressor C-terminal-like domain Rfer_0127 c-terminal-like IPR024946 - Arginine repressor C-terminal-like domain Rfer_0130 hydrolase IPR011330 - Glycoside hydrolase/deacetylase, beta/alpha-barrel Rfer_0130 glycoside IPR011330 - Glycoside hydrolase/deacetylase, beta/alpha-barrel Rfer_0130 beta IPR011330 - Glycoside hydrolase/deacetylase, beta/alpha-barrel Rfer_0131 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0132 barrel IPR012349 - FMN-binding split barrel Rfer_0133 prenyltransferase IPR004507 - Decarboxylase UbiX/Pad1 Rfer_0140 abc IPR003439 - ABC transporter-like Rfer_0140 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0140 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0140 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0140 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0141 abc IPR003439 - ABC transporter-like Rfer_0141 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0141 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0141 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0141 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0146 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0146 transcription IPR028978 - Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain Rfer_0148 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0148 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0148 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0148 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0150 fold IPR016024 - Armadillo-type fold Rfer_0151 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0152 barrel IPR011008 - Dimeric alpha-beta barrel Rfer_0154 hydrolase IPR027369 - DinB/YfiT-like putative metal-dependent hydrolase Rfer_0154 putative IPR027369 - DinB/YfiT-like putative metal-dependent hydrolase Rfer_0158 peptidase IPR002933 - Peptidase M20 Rfer_0160 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0162 abc IPR000515 - MetI-like domain Rfer_0162 transmembrane IPR000515 - MetI-like domain Rfer_0162 transporter IPR000515 - MetI-like domain Rfer_0163 abc IPR000515 - MetI-like domain Rfer_0163 transmembrane IPR000515 - MetI-like domain Rfer_0163 transporter IPR000515 - MetI-like domain Rfer_0164 abc IPR003439 - ABC transporter-like Rfer_0164 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0164 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0164 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0164 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0164 amino IPR030679 - Rfer_0164|Rfer_0164|REF_jgi:Rfer_0164|GeneID:3960166 Rfer_0164 component IPR030679 - Rfer_0164|Rfer_0164|REF_jgi:Rfer_0164|GeneID:3960166 Rfer_0164 transport IPR030679 - Rfer_0164|Rfer_0164|REF_jgi:Rfer_0164|GeneID:3960166 Rfer_0164 atpase IPR030679 - Rfer_0164|Rfer_0164|REF_jgi:Rfer_0164|GeneID:3960166 Rfer_0164 acid IPR030679 - Rfer_0164|Rfer_0164|REF_jgi:Rfer_0164|GeneID:3960166 Rfer_0165 peptidase IPR002933 - Peptidase M20 Rfer_0165 decarboxylase IPR018020 - Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase Rfer_0166 peptidase IPR002933 - Peptidase M20 Rfer_0169 membrane IPR006143 - RND efflux pump, membrane fusion protein Rfer_0169 pump IPR006143 - RND efflux pump, membrane fusion protein Rfer_0169 efflux IPR006143 - RND efflux pump, membrane fusion protein Rfer_0170 transporter IPR000412 - ABC-2 transporter Rfer_0170 abc IPR003439 - ABC transporter-like Rfer_0170 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0170 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0170 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0170 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0171 transporter IPR000412 - ABC-2 transporter Rfer_0172 cytochrome IPR009056 - Cytochrome c-like domain Rfer_0172 c-like IPR009056 - Cytochrome c-like domain Rfer_0177 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0177 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0177 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0177 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0178 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0181 reductase IPR016156 - FAD/NAD-linked reductase, dimerisation domain Rfer_0183 abc IPR000515 - MetI-like domain Rfer_0183 transmembrane IPR000515 - MetI-like domain Rfer_0183 transporter IPR000515 - MetI-like domain Rfer_0184 abc IPR005770 - Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein Rfer_0184 binding IPR005770 - Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein Rfer_0184 phosphate IPR005770 - Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein Rfer_0184 periplasmic IPR005770 - Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein Rfer_0184 transporter IPR005770 - Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein Rfer_0185 abc IPR003439 - ABC transporter-like Rfer_0185 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0185 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0185 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0185 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0186 major IPR011701 - Major facilitator superfamily Rfer_0186 major IPR020846 - Major facilitator superfamily domain Rfer_0188 acyl-coa IPR016181 - Acyl-CoA N-acyltransferase Rfer_0193 esterase IPR013830 - Rfer_0193|Rfer_0193|REF_jgi:Rfer_0193|GeneID:3961347 Rfer_0194 beta-barrel IPR011250 - Outer membrane protein/outer membrane enzyme PagP , beta-barrel Rfer_0194 enzyme IPR011250 - Outer membrane protein/outer membrane enzyme PagP , beta-barrel Rfer_0194 outer IPR011250 - Outer membrane protein/outer membrane enzyme PagP , beta-barrel Rfer_0194 outer IPR011250 - Outer membrane protein/outer membrane enzyme PagP , beta-barrel Rfer_0194 membrane IPR011250 - Outer membrane protein/outer membrane enzyme PagP , beta-barrel Rfer_0194 membrane IPR011250 - Outer membrane protein/outer membrane enzyme PagP , beta-barrel Rfer_0195 alpha IPR017945 - DHBP synthase RibB-like alpha/beta domain Rfer_0195 beta IPR017945 - DHBP synthase RibB-like alpha/beta domain Rfer_0195 synthase IPR017945 - DHBP synthase RibB-like alpha/beta domain Rfer_0196 fold IPR011761 - ATP-grasp fold Rfer_0196 subdomain IPR013816 - ATP-grasp fold, subdomain 2 Rfer_0196 fold IPR013816 - ATP-grasp fold, subdomain 2 Rfer_0198 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_0198 fold IPR012336 - Thioredoxin-like fold Rfer_0199 binding IPR004452 - 4Fe-4S binding protein Rfer_0202 c-terminal IPR008920 - Transcription regulator FadR/GntR, C-terminal Rfer_0202 transcription IPR008920 - Transcription regulator FadR/GntR, C-terminal Rfer_0202 regulator IPR008920 - Transcription regulator FadR/GntR, C-terminal Rfer_0202 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0203 synthase IPR001636 - Phosphoribosylaminoimidazole-succinocarboxamide synthase Rfer_0203 subdomain IPR013816 - ATP-grasp fold, subdomain 2 Rfer_0203 fold IPR013816 - ATP-grasp fold, subdomain 2 Rfer_0204 aldolase IPR000771 - Ketose-bisphosphate aldolase, class-II Rfer_0204 barrel IPR013785 - Aldolase-type TIM barrel Rfer_0205 pyruvate IPR011037 - Pyruvate kinase-like, insert domain Rfer_0205 kinase-like IPR011037 - Pyruvate kinase-like, insert domain Rfer_0205 c-terminal IPR015795 - Pyruvate kinase, C-terminal Rfer_0205 kinase IPR015795 - Pyruvate kinase, C-terminal Rfer_0205 pyruvate IPR015795 - Pyruvate kinase, C-terminal Rfer_0205 kinase-like IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_0205 pyruvate IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_0207 alpha IPR029028 - Alpha/beta knot methyltransferases Rfer_0207 beta IPR029028 - Alpha/beta knot methyltransferases Rfer_0208 cytochrome IPR009056 - Cytochrome c-like domain Rfer_0208 c-like IPR009056 - Cytochrome c-like domain Rfer_0210 abc IPR003439 - ABC transporter-like Rfer_0210 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0210 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0210 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0210 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0211 abc IPR003439 - ABC transporter-like Rfer_0211 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0211 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0211 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0211 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0212 transporter IPR001851 - ABC transporter, permease Rfer_0212 abc IPR001851 - ABC transporter, permease Rfer_0212 permease IPR001851 - ABC transporter, permease Rfer_0213 transporter IPR001851 - ABC transporter, permease Rfer_0213 abc IPR001851 - ABC transporter, permease Rfer_0213 permease IPR001851 - ABC transporter, permease Rfer_0214 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_0214 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_0214 binding IPR028082 - Periplasmic binding protein-like I Rfer_0215 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_0215 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_0215 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_0215 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_0216 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_0216 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_0217 dehydrogenase IPR016161 - Aldehyde/histidinol dehydrogenase Rfer_0219 dna-binding IPR010982 - Lambda repressor-like, DNA-binding domain Rfer_0219 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0219 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0219 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0219 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0222 oxidoreductase IPR001433 - Oxidoreductase FAD/NAD(P)-binding Rfer_0222 beta-barrel IPR017938 - Riboflavin synthase-like beta-barrel Rfer_0222 synthase-like IPR017938 - Riboflavin synthase-like beta-barrel Rfer_0224 domain-like IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0224 dehydrogenase IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0224 c-terminal IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0224 6-phosphogluconate IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0224 dehydrogenase IPR013328 - Dehydrogenase, multihelical Rfer_0224 6-phosphogluconate IPR013328 - Dehydrogenase, multihelical Rfer_0230 dna-binding IPR010982 - Lambda repressor-like, DNA-binding domain Rfer_0230 fold IPR014710 - RmlC-like jelly roll fold Rfer_0233 abc IPR000515 - MetI-like domain Rfer_0233 transmembrane IPR000515 - MetI-like domain Rfer_0233 transporter IPR000515 - MetI-like domain Rfer_0234 abc IPR003439 - ABC transporter-like Rfer_0234 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0234 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0234 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0234 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0234 amino IPR030679 - Rfer_0234|Rfer_0234|REF_jgi:Rfer_0234|GeneID:3962292 Rfer_0234 component IPR030679 - Rfer_0234|Rfer_0234|REF_jgi:Rfer_0234|GeneID:3962292 Rfer_0234 transport IPR030679 - Rfer_0234|Rfer_0234|REF_jgi:Rfer_0234|GeneID:3962292 Rfer_0234 atpase IPR030679 - Rfer_0234|Rfer_0234|REF_jgi:Rfer_0234|GeneID:3962292 Rfer_0234 acid IPR030679 - Rfer_0234|Rfer_0234|REF_jgi:Rfer_0234|GeneID:3962292 Rfer_0235 barrel IPR011008 - Dimeric alpha-beta barrel Rfer_0235 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0237 abc IPR000515 - MetI-like domain Rfer_0237 transmembrane IPR000515 - MetI-like domain Rfer_0237 transporter IPR000515 - MetI-like domain Rfer_0238 abc IPR000515 - MetI-like domain Rfer_0238 transmembrane IPR000515 - MetI-like domain Rfer_0238 transporter IPR000515 - MetI-like domain Rfer_0239 abc IPR003439 - ABC transporter-like Rfer_0239 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0239 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0239 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0239 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0239 amino IPR030679 - Rfer_0239|Rfer_0239|REF_jgi:Rfer_0239|GeneID:3962297 Rfer_0239 component IPR030679 - Rfer_0239|Rfer_0239|REF_jgi:Rfer_0239|GeneID:3962297 Rfer_0239 transport IPR030679 - Rfer_0239|Rfer_0239|REF_jgi:Rfer_0239|GeneID:3962297 Rfer_0239 atpase IPR030679 - Rfer_0239|Rfer_0239|REF_jgi:Rfer_0239|GeneID:3962297 Rfer_0239 acid IPR030679 - Rfer_0239|Rfer_0239|REF_jgi:Rfer_0239|GeneID:3962297 Rfer_0246 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0246 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0246 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0246 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0246 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_0246 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_0246 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_0247 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0247 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0247 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0247 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0250 cytochrome IPR011031 - Multihaem cytochrome Rfer_0252 cytochrome IPR011031 - Multihaem cytochrome Rfer_0253 cytochrome IPR011031 - Multihaem cytochrome Rfer_0254 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_0254 fold IPR012336 - Thioredoxin-like fold Rfer_0259 cytochrome IPR011031 - Multihaem cytochrome Rfer_0260 cytochrome IPR011031 - Multihaem cytochrome Rfer_0262 phosphate IPR002505 - Phosphate acetyl/butaryl transferase Rfer_0262 transferase IPR002505 - Phosphate acetyl/butaryl transferase Rfer_0262 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0262 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0262 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0262 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0262 domain-like IPR028979 - HPr(Ser) kinase/phosphorylase, N-terminal domain like Rfer_0262 phosphorylase IPR028979 - HPr(Ser) kinase/phosphorylase, N-terminal domain like Rfer_0262 kinase IPR028979 - HPr(Ser) kinase/phosphorylase, N-terminal domain like Rfer_0263 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0264 dehydrogenase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_0264 acyl-coa IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_0264 oxidase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_0264 c-terminal IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_0264 dehydrogenase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_0264 oxidase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_0264 acyl-coa IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_0265 porin IPR023614 - Porin domain Rfer_0266 abc IPR003439 - ABC transporter-like Rfer_0266 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0266 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0266 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0266 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0267 transporter IPR001851 - ABC transporter, permease Rfer_0267 abc IPR001851 - ABC transporter, permease Rfer_0267 permease IPR001851 - ABC transporter, permease Rfer_0267 abc IPR003439 - ABC transporter-like Rfer_0267 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0267 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0267 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0267 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0268 transporter IPR001851 - ABC transporter, permease Rfer_0268 abc IPR001851 - ABC transporter, permease Rfer_0268 permease IPR001851 - ABC transporter, permease Rfer_0269 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_0269 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_0269 binding IPR028082 - Periplasmic binding protein-like I Rfer_0271 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_0271 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_0273 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_0273 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_0278 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0279 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0281 oxidoreductase IPR001433 - Oxidoreductase FAD/NAD(P)-binding Rfer_0281 beta-barrel IPR017938 - Riboflavin synthase-like beta-barrel Rfer_0281 synthase-like IPR017938 - Riboflavin synthase-like beta-barrel Rfer_0282 putative IPR005358 - Putative zinc- or iron-chelating domain containing protein Rfer_0282 containing IPR005358 - Putative zinc- or iron-chelating domain containing protein Rfer_0283 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0285 effector IPR011256 - Regulatory factor, effector binding domain Rfer_0285 binding IPR011256 - Regulatory factor, effector binding domain Rfer_0285 factor IPR011256 - Regulatory factor, effector binding domain Rfer_0285 regulatory IPR011256 - Regulatory factor, effector binding domain Rfer_0288 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_0288 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_0288 binding IPR028082 - Periplasmic binding protein-like I Rfer_0289 transporter IPR001851 - ABC transporter, permease Rfer_0289 abc IPR001851 - ABC transporter, permease Rfer_0289 permease IPR001851 - ABC transporter, permease Rfer_0290 transporter IPR001851 - ABC transporter, permease Rfer_0290 abc IPR001851 - ABC transporter, permease Rfer_0290 permease IPR001851 - ABC transporter, permease Rfer_0291 abc IPR003439 - ABC transporter-like Rfer_0291 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0291 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0291 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0291 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0292 abc IPR003439 - ABC transporter-like Rfer_0292 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0292 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0292 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0292 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0296 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0297 fold IPR014710 - RmlC-like jelly roll fold Rfer_0297 regulator IPR020449 - Transcription regulator HTH, AraC- type Rfer_0297 transcription IPR020449 - Transcription regulator HTH, AraC- type Rfer_0298 cytochrome IPR001128 - Cytochrome P450 Rfer_0300 reductase IPR016156 - FAD/NAD-linked reductase, dimerisation domain Rfer_0302 reductase IPR001395 - Aldo/keto reductase Rfer_0302 beta IPR001395 - Aldo/keto reductase Rfer_0302 channel IPR001395 - Aldo/keto reductase Rfer_0302 potassium IPR001395 - Aldo/keto reductase Rfer_0303 transcriptional IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_0303 c-terminal IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_0303 regulator IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_0304 dehydrogenase IPR002085 - Alcohol dehydrogenase superfamily, zinc-type Rfer_0305 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_0305 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_0306 barrel IPR013785 - Aldolase-type TIM barrel Rfer_0307 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_0307 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_0307 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_0307 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_0308 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_0308 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_0309 dehydrogenase IPR002085 - Alcohol dehydrogenase superfamily, zinc-type Rfer_0310 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_0310 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_0311 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_0311 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_0311 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_0311 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_0313 barrel IPR013785 - Aldolase-type TIM barrel Rfer_0314 major IPR011701 - Major facilitator superfamily Rfer_0314 major IPR020846 - Major facilitator superfamily domain Rfer_0319 beta-barrel IPR011250 - Outer membrane protein/outer membrane enzyme PagP , beta-barrel Rfer_0319 enzyme IPR011250 - Outer membrane protein/outer membrane enzyme PagP , beta-barrel Rfer_0319 outer IPR011250 - Outer membrane protein/outer membrane enzyme PagP , beta-barrel Rfer_0319 outer IPR011250 - Outer membrane protein/outer membrane enzyme PagP , beta-barrel Rfer_0319 membrane IPR011250 - Outer membrane protein/outer membrane enzyme PagP , beta-barrel Rfer_0319 membrane IPR011250 - Outer membrane protein/outer membrane enzyme PagP , beta-barrel Rfer_0320 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_0320 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_0321 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_0321 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_0323 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_0323 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_0323 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_0323 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_0325 transcriptional IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_0325 c-terminal IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_0325 regulator IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_0334 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_0334 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_0334 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_0334 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_0336 domain-like IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0336 dehydrogenase IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0336 c-terminal IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0336 6-phosphogluconate IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0336 dehydrogenase IPR013328 - Dehydrogenase, multihelical Rfer_0336 6-phosphogluconate IPR013328 - Dehydrogenase, multihelical Rfer_0341 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0342 reductase IPR001395 - Aldo/keto reductase Rfer_0342 beta IPR001395 - Aldo/keto reductase Rfer_0342 channel IPR001395 - Aldo/keto reductase Rfer_0342 potassium IPR001395 - Aldo/keto reductase Rfer_0348 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0348 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_0349 peptidase IPR011697 - Peptidase C26 Rfer_0350 synthetase IPR014746 - Glutamine synthetase/guanido kinase, catalytic domain Rfer_0350 catalytic IPR014746 - Glutamine synthetase/guanido kinase, catalytic domain Rfer_0350 kinase IPR014746 - Glutamine synthetase/guanido kinase, catalytic domain Rfer_0351 aminotransferase IPR005814 - Aminotransferase class-III Rfer_0351 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_0353 abc IPR003439 - ABC transporter-like Rfer_0353 binding IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_0353 c-terminal IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_0353 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0353 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0353 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0353 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0354 abc IPR000515 - MetI-like domain Rfer_0354 transmembrane IPR000515 - MetI-like domain Rfer_0354 transporter IPR000515 - MetI-like domain Rfer_0355 abc IPR000515 - MetI-like domain Rfer_0355 transmembrane IPR000515 - MetI-like domain Rfer_0355 transporter IPR000515 - MetI-like domain Rfer_0356 dehydrogenase IPR016161 - Aldehyde/histidinol dehydrogenase Rfer_0358 major IPR011701 - Major facilitator superfamily Rfer_0358 major IPR020846 - Major facilitator superfamily domain Rfer_0359 methyltransferase IPR007318 - Phospholipid methyltransferase Rfer_0360 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_0361 acyl IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_0361 acyl IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_0361 hydrolase IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_0361 transferase IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_0362 atp-dependent IPR022953 - Phosphofructokinase Rfer_0365 beta-barrel IPR009009 - RlpA-like double-psi beta-barrel domain Rfer_0370 radical IPR007197 - Radical SAM Rfer_0370 barrel IPR013785 - Aldolase-type TIM barrel Rfer_0371 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_0371 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_0371 binding IPR028082 - Periplasmic binding protein-like I Rfer_0372 dehydrogenase IPR010061 - Methylmalonate-semialdehyde dehydrogenase Rfer_0372 dehydrogenase IPR016161 - Aldehyde/histidinol dehydrogenase Rfer_0373 aminotransferase IPR005814 - Aminotransferase class-III Rfer_0373 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_0374 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0379 resistance IPR001036 - Acriflavin resistance protein Rfer_0380 membrane IPR006143 - RND efflux pump, membrane fusion protein Rfer_0380 pump IPR006143 - RND efflux pump, membrane fusion protein Rfer_0380 efflux IPR006143 - RND efflux pump, membrane fusion protein Rfer_0383 dioxygenase IPR029068 - Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Rfer_0383 resistance IPR029068 - Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Rfer_0384 binding IPR009081 - Acyl carrier protein-like Rfer_0386 c-terminal IPR009014 - Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Rfer_0386 oxidoreductase IPR009014 - Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Rfer_0388 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_0388 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_0391 kinase-like IPR011009 - Protein kinase-like domain Rfer_0393 cytochrome IPR009056 - Cytochrome c-like domain Rfer_0393 c-like IPR009056 - Cytochrome c-like domain Rfer_0395 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_0395 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_0395 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_0395 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_0396 radical IPR007197 - Radical SAM Rfer_0396 enzyme IPR016431 - Pyruvate-formate lyase-activating enzyme, predicted Rfer_0396 predicted IPR016431 - Pyruvate-formate lyase-activating enzyme, predicted Rfer_0399 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0399 regulator IPR017685 - Transcription regulator ArgP Rfer_0399 transcriptional IPR017685 - Transcription regulator ArgP Rfer_0400 transcriptional IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_0400 c-terminal IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_0400 regulator IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_0401 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0401 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0401 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0401 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0402 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_0402 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_0402 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_0402 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_0403 peptidase IPR002933 - Peptidase M20 Rfer_0404 barrel IPR013785 - Aldolase-type TIM barrel Rfer_0405 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_0406 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_0406 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_0406 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_0406 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_0407 helicase IPR004589 - DNA helicase, ATP-dependent, RecQ type Rfer_0407 dna IPR004589 - DNA helicase, ATP-dependent, RecQ type Rfer_0407 atp-dependent IPR004589 - DNA helicase, ATP-dependent, RecQ type Rfer_0407 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0407 helicase IPR014001 - Helicase, superfamily 1/2, ATP-binding domain Rfer_0407 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0407 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0407 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0407 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0409 fold IPR014710 - RmlC-like jelly roll fold Rfer_0409 regulator IPR020449 - Transcription regulator HTH, AraC- type Rfer_0409 transcription IPR020449 - Transcription regulator HTH, AraC- type Rfer_0411 resistance IPR001036 - Acriflavin resistance protein Rfer_0412 membrane IPR006143 - RND efflux pump, membrane fusion protein Rfer_0412 pump IPR006143 - RND efflux pump, membrane fusion protein Rfer_0412 efflux IPR006143 - RND efflux pump, membrane fusion protein Rfer_0413 outer IPR003423 - Outer membrane efflux protein Rfer_0413 efflux IPR003423 - Outer membrane efflux protein Rfer_0413 membrane IPR003423 - Outer membrane efflux protein Rfer_0414 fold IPR012336 - Thioredoxin-like fold Rfer_0418 atpase IPR001757 - Cation-transporting P-type ATPase Rfer_0419 methyltransferase IPR007318 - Phospholipid methyltransferase Rfer_0422 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0423 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0423 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0423 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0423 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0423 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_0423 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_0423 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_0428 kinase-like IPR011009 - Protein kinase-like domain Rfer_0430 domain-like IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0430 dehydrogenase IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0430 c-terminal IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0430 6-phosphogluconate IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0430 dehydrogenase IPR013328 - Dehydrogenase, multihelical Rfer_0430 6-phosphogluconate IPR013328 - Dehydrogenase, multihelical Rfer_0433 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_0433 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_0434 major IPR011701 - Major facilitator superfamily Rfer_0434 major IPR020846 - Major facilitator superfamily domain Rfer_0437 abc IPR003439 - ABC transporter-like Rfer_0437 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0437 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0437 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0437 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0438 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_0438 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_0438 binding IPR028082 - Periplasmic binding protein-like I Rfer_0439 transporter IPR001851 - ABC transporter, permease Rfer_0439 abc IPR001851 - ABC transporter, permease Rfer_0439 permease IPR001851 - ABC transporter, permease Rfer_0441 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0442 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_0442 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_0446 domain-like IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0446 dehydrogenase IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0446 c-terminal IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0446 6-phosphogluconate IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0446 dehydrogenase IPR013328 - Dehydrogenase, multihelical Rfer_0446 6-phosphogluconate IPR013328 - Dehydrogenase, multihelical Rfer_0447 c-terminal IPR008920 - Transcription regulator FadR/GntR, C-terminal Rfer_0447 transcription IPR008920 - Transcription regulator FadR/GntR, C-terminal Rfer_0447 regulator IPR008920 - Transcription regulator FadR/GntR, C-terminal Rfer_0447 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0450 transporter IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_0450 receptor IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_0450 solute IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_0452 dehydrogenase IPR016161 - Aldehyde/histidinol dehydrogenase Rfer_0453 barrel IPR013785 - Aldolase-type TIM barrel Rfer_0454 barrel IPR013785 - Aldolase-type TIM barrel Rfer_0456 6-phosphogluconate IPR000581 - Dihydroxy-acid/6-phosphogluconate dehydratase Rfer_0456 dehydratase IPR000581 - Dihydroxy-acid/6-phosphogluconate dehydratase Rfer_0456 dehydratase IPR015928 - Aconitase/3-isopropylmalate dehydratase, swivel Rfer_0456 aconitase IPR015928 - Aconitase/3-isopropylmalate dehydratase, swivel Rfer_0457 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0458 domain-like IPR029016 - GAF domain-like Rfer_0458 cyclase IPR029787 - Nucleotide cyclase Rfer_0458 nucleotide IPR029787 - Nucleotide cyclase Rfer_0459 helicase IPR004589 - DNA helicase, ATP-dependent, RecQ type Rfer_0459 dna IPR004589 - DNA helicase, ATP-dependent, RecQ type Rfer_0459 atp-dependent IPR004589 - DNA helicase, ATP-dependent, RecQ type Rfer_0459 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0459 helicase IPR014001 - Helicase, superfamily 1/2, ATP-binding domain Rfer_0459 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0459 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0459 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0459 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0461 aminotransferase IPR001544 - Aminotransferase, class IV Rfer_0462 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0464 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_0465 domain-like IPR008979 - Galactose-binding domain-like Rfer_0466 (vitamin IPR006158 - Cobalamin (vitamin B12)-binding domain Rfer_0466 cobalamin IPR006158 - Cobalamin (vitamin B12)-binding domain Rfer_0466 synthase-like IPR011005 - Dihydropteroate synthase-like Rfer_0467 major IPR011701 - Major facilitator superfamily Rfer_0467 major IPR020846 - Major facilitator superfamily domain Rfer_0468 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0468 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0468 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0468 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0469 domain-like IPR029016 - GAF domain-like Rfer_0469 cyclase IPR029787 - Nucleotide cyclase Rfer_0469 nucleotide IPR029787 - Nucleotide cyclase Rfer_0471 fold IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_0471 ribosomal IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_0471 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0471 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0471 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0471 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0472 nitrogen IPR011322 - Nitrogen regulatory PII-like, alpha/beta Rfer_0472 beta IPR011322 - Nitrogen regulatory PII-like, alpha/beta Rfer_0472 regulatory IPR011322 - Nitrogen regulatory PII-like, alpha/beta Rfer_0472 alpha IPR011322 - Nitrogen regulatory PII-like, alpha/beta Rfer_0473 transporter IPR001905 - Ammonium transporter Rfer_0473 transporter IPR029020 - Ammonium/urea transporter Rfer_0474 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0475 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_0475 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_0476 barrel IPR013785 - Aldolase-type TIM barrel Rfer_0477 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_0478 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0478 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0478 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0478 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0480 c-terminal IPR016164 - FAD-linked oxidase-like, C-terminal Rfer_0482 barrel IPR013785 - Aldolase-type TIM barrel Rfer_0483 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_0484 peroxidase IPR000889 - Glutathione peroxidase Rfer_0484 fold IPR012336 - Thioredoxin-like fold Rfer_0487 major IPR011701 - Major facilitator superfamily Rfer_0487 major IPR020846 - Major facilitator superfamily domain Rfer_0488 c-terminal IPR009006 - Alanine racemase/group IV decarboxylase, C-terminal Rfer_0488 decarboxylase IPR009006 - Alanine racemase/group IV decarboxylase, C-terminal Rfer_0488 barrel IPR029066 - PLP-binding barrel Rfer_0492 atpase IPR001757 - Cation-transporting P-type ATPase Rfer_0493 atpase IPR001757 - Cation-transporting P-type ATPase Rfer_0495 kinase-like IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_0495 pyruvate IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_0496 cation IPR002524 - Cation efflux protein Rfer_0496 efflux IPR002524 - Cation efflux protein Rfer_0497 oxidoreductase IPR001433 - Oxidoreductase FAD/NAD(P)-binding Rfer_0497 reductase IPR001834 - NADH:cytochrome b5 reductase (CBR) Rfer_0497 beta-barrel IPR017938 - Riboflavin synthase-like beta-barrel Rfer_0497 synthase-like IPR017938 - Riboflavin synthase-like beta-barrel Rfer_0499 cytochrome IPR011031 - Multihaem cytochrome Rfer_0500 fold IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_0500 ribosomal IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_0500 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0500 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0500 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0500 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0502 transmembrane IPR016174 - Di-haem cytochrome, transmembrane Rfer_0502 cytochrome IPR016174 - Di-haem cytochrome, transmembrane Rfer_0503 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0504 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0504 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0504 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0504 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0506 aminotransferase IPR001544 - Aminotransferase, class IV Rfer_0508 glycosyl IPR002201 - Glycosyl transferase, family 9 Rfer_0508 transferase IPR002201 - Glycosyl transferase, family 9 Rfer_0509 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0509 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0509 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0509 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0509 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_0509 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_0509 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_0510 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0511 glycosyl IPR000811 - Glycosyl transferase, family 35 Rfer_0511 transferase IPR000811 - Glycosyl transferase, family 35 Rfer_0514 hydrolase IPR017853 - Glycoside hydrolase, superfamily Rfer_0514 glycoside IPR017853 - Glycoside hydrolase, superfamily Rfer_0515 enzyme IPR011837 - Glycogen debranching enzyme, GlgX type Rfer_0515 hydrolase IPR013780 - Glycosyl hydrolase, family 13, all-beta Rfer_0515 glycosyl IPR013780 - Glycosyl hydrolase, family 13, all-beta Rfer_0515 fold IPR013783 - Immunoglobulin-like fold Rfer_0515 hydrolase IPR015902 - Glycoside hydrolase, family 13 Rfer_0515 glycoside IPR015902 - Glycoside hydrolase, family 13 Rfer_0515 hydrolase IPR017853 - Glycoside hydrolase, superfamily Rfer_0515 glycoside IPR017853 - Glycoside hydrolase, superfamily Rfer_0516 major IPR020846 - Major facilitator superfamily domain Rfer_0518 enzyme IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_0518 thiamine IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_0518 c-terminal IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_0518 enzyme IPR012001 - Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Rfer_0518 thiamine IPR012001 - Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Rfer_0518 thiamine IPR012110 - Thiamine pyrophosphate (TPP)-dependent enzyme Rfer_0518 enzyme IPR012110 - Thiamine pyrophosphate (TPP)-dependent enzyme Rfer_0519 transporter IPR001905 - Ammonium transporter Rfer_0519 transporter IPR029020 - Ammonium/urea transporter Rfer_0523 dehydrogenase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_0523 acyl-coa IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_0523 oxidase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_0523 c-terminal IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_0524 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0527 porin IPR023614 - Porin domain Rfer_0528 porin IPR023614 - Porin domain Rfer_0529 kinase IPR006283 - Thiamine-monophosphate kinase Rfer_0529 c-terminal IPR010918 - AIR synthase-related protein, C-terminal domain Rfer_0532 barrel IPR013785 - Aldolase-type TIM barrel Rfer_0534 bacterial IPR000983 - Bacterial general secretion pathway protein G-type pilin Rfer_0534 secretion IPR000983 - Bacterial general secretion pathway protein G-type pilin Rfer_0542 secretion IPR004846 - Type II/III secretion system Rfer_0543 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0543 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0543 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0543 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0545 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_0545 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_0553 alpha IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Rfer_0553 atpase IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Rfer_0553 beta IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Rfer_0553 complex IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Rfer_0553 atpase IPR005714 - ATPase, type III secretion system, FliI/YscN Rfer_0553 secretion IPR005714 - ATPase, type III secretion system, FliI/YscN Rfer_0553 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0553 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0553 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0553 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0554 flagellar IPR012823 - Flagellar export FliJ Rfer_0554 export IPR012823 - Flagellar export FliJ Rfer_0555 protein-like IPR021136 - Flagellar hook-length control protein-like, C-terminal Rfer_0555 flagellar IPR021136 - Flagellar hook-length control protein-like, C-terminal Rfer_0555 c-terminal IPR021136 - Flagellar hook-length control protein-like, C-terminal Rfer_0558 flagellar IPR001172 - Flagellar motor switch FliN/Type III secretion HrcQb Rfer_0558 secretion IPR001172 - Flagellar motor switch FliN/Type III secretion HrcQb Rfer_0560 membrane IPR005838 - Type III secretion system inner membrane P protein Rfer_0560 secretion IPR005838 - Type III secretion system inner membrane P protein Rfer_0560 inner IPR005838 - Type III secretion system inner membrane P protein Rfer_0561 export IPR002191 - Bacterial export protein family 3 Rfer_0561 bacterial IPR002191 - Bacterial export protein family 3 Rfer_0562 membrane IPR002010 - Type III secretion system inner membrane R protein Rfer_0562 secretion IPR002010 - Type III secretion system inner membrane R protein Rfer_0562 inner IPR002010 - Type III secretion system inner membrane R protein Rfer_0563 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0564 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0564 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0564 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0564 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0567 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0567 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0567 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0567 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0567 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_0567 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_0567 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_0569 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_0572 oxidoreductase IPR012132 - Glucose-methanol-choline oxidoreductase Rfer_0573 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0574 domain-like IPR015946 - K homology domain-like, alpha/beta Rfer_0574 homology IPR015946 - K homology domain-like, alpha/beta Rfer_0574 beta IPR015946 - K homology domain-like, alpha/beta Rfer_0574 alpha IPR015946 - K homology domain-like, alpha/beta Rfer_0576 kinase-like IPR011009 - Protein kinase-like domain Rfer_0577 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0577 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0577 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0577 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0577 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_0577 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_0577 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_0578 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0580 abc IPR003439 - ABC transporter-like Rfer_0580 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0580 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0580 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0580 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0581 abc IPR000515 - MetI-like domain Rfer_0581 transmembrane IPR000515 - MetI-like domain Rfer_0581 transporter IPR000515 - MetI-like domain Rfer_0582 abc IPR000515 - MetI-like domain Rfer_0582 transmembrane IPR000515 - MetI-like domain Rfer_0582 transporter IPR000515 - MetI-like domain Rfer_0585 acid IPR002293 - Amino acid/polyamine transporter I Rfer_0585 amino IPR002293 - Amino acid/polyamine transporter I Rfer_0585 transporter IPR002293 - Amino acid/polyamine transporter I Rfer_0586 barrel IPR013785 - Aldolase-type TIM barrel Rfer_0590 ligase IPR002318 - Alanine-tRNA ligase, class IIc Rfer_0590 translation IPR009000 - Translation protein, beta-barrel domain Rfer_0590 beta-barrel IPR009000 - Translation protein, beta-barrel domain Rfer_0591 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0591 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_0592 aminotransferase IPR005814 - Aminotransferase class-III Rfer_0592 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_0593 abc IPR003439 - ABC transporter-like Rfer_0593 binding IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_0593 c-terminal IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_0593 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0593 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0593 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0593 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0595 abc IPR000515 - MetI-like domain Rfer_0595 transmembrane IPR000515 - MetI-like domain Rfer_0595 transporter IPR000515 - MetI-like domain Rfer_0596 abc IPR000515 - MetI-like domain Rfer_0596 transmembrane IPR000515 - MetI-like domain Rfer_0596 transporter IPR000515 - MetI-like domain Rfer_0598 dehydrogenase IPR016161 - Aldehyde/histidinol dehydrogenase Rfer_0599 transmembrane IPR016174 - Di-haem cytochrome, transmembrane Rfer_0599 cytochrome IPR016174 - Di-haem cytochrome, transmembrane Rfer_0600 cytochrome IPR010980 - Cytochrome c/b562 Rfer_0601 iia IPR004701 - Phosphotransferase system, mannose-type IIA component Rfer_0601 phosphotransferase IPR004701 - Phosphotransferase system, mannose-type IIA component Rfer_0601 component IPR004701 - Phosphotransferase system, mannose-type IIA component Rfer_0603 enzyme IPR008279 - PEP-utilising enzyme, mobile domain Rfer_0603 kinase-like IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_0603 pyruvate IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_0606 c-terminal IPR016164 - FAD-linked oxidase-like, C-terminal Rfer_0615 finger IPR000962 - Zinc finger, DksA/TraR C4-type Rfer_0615 zinc IPR000962 - Zinc finger, DksA/TraR C4-type Rfer_0624 domain-like IPR029060 - PIN domain-like Rfer_0629 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0629 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0629 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0629 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0642 abc IPR003439 - ABC transporter-like Rfer_0642 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0642 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0642 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0642 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0644 hydrolase IPR006379 - HAD-superfamily hydrolase, subfamily IIB Rfer_0644 had-superfamily IPR006379 - HAD-superfamily hydrolase, subfamily IIB Rfer_0644 subfamily IPR006379 - HAD-superfamily hydrolase, subfamily IIB Rfer_0645 translation IPR009000 - Translation protein, beta-barrel domain Rfer_0645 beta-barrel IPR009000 - Translation protein, beta-barrel domain Rfer_0645 elongation IPR009022 - Elongation factor G, III-V domain Rfer_0645 factor IPR009022 - Elongation factor G, III-V domain Rfer_0645 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0645 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0645 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0645 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0646 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_0646 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_0651 fold IPR012336 - Thioredoxin-like fold Rfer_0653 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_0654 reductase IPR003171 - Methylenetetrahydrofolate reductase Rfer_0657 phosphatase IPR017867 - Protein-tyrosine phosphatase, low molecular weight Rfer_0657 protein-tyrosine IPR017867 - Protein-tyrosine phosphatase, low molecular weight Rfer_0658 polysaccharide IPR003715 - Polysaccharide export protein Rfer_0658 export IPR003715 - Polysaccharide export protein Rfer_0660 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0660 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0660 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0660 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0661 porin IPR023614 - Porin domain Rfer_0662 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0662 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0662 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0662 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0664 hydrolase IPR011330 - Glycoside hydrolase/deacetylase, beta/alpha-barrel Rfer_0664 glycoside IPR011330 - Glycoside hydrolase/deacetylase, beta/alpha-barrel Rfer_0664 beta IPR011330 - Glycoside hydrolase/deacetylase, beta/alpha-barrel Rfer_0665 acyl-coa IPR016181 - Acyl-CoA N-acyltransferase Rfer_0667 domain-like IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0667 dehydrogenase IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0667 c-terminal IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0667 6-phosphogluconate IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0667 dehydrogenase IPR017476 - UDP-glucose/GDP-mannose dehydrogenase Rfer_0669 synthase IPR006426 - Asparagine synthase, glutamine-hydrolyzing Rfer_0669 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0669 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0669 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0669 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0671 synthase IPR006426 - Asparagine synthase, glutamine-hydrolyzing Rfer_0671 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0671 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0671 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0671 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0673 domain-like IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0673 dehydrogenase IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0673 c-terminal IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0673 6-phosphogluconate IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0673 dehydrogenase IPR017476 - UDP-glucose/GDP-mannose dehydrogenase Rfer_0676 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_0676 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_0678 hydrolase IPR011330 - Glycoside hydrolase/deacetylase, beta/alpha-barrel Rfer_0678 glycoside IPR011330 - Glycoside hydrolase/deacetylase, beta/alpha-barrel Rfer_0678 beta IPR011330 - Glycoside hydrolase/deacetylase, beta/alpha-barrel Rfer_0680 lyase IPR008929 - Chondroitin AC/alginate lyase Rfer_0683 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0683 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0683 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0683 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0689 aminotransferase IPR000653 - DegT/DnrJ/EryC1/StrS aminotransferase Rfer_0689 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_0690 fold IPR014710 - RmlC-like jelly roll fold Rfer_0691 biosynthesis IPR002797 - Polysaccharide biosynthesis protein Rfer_0691 polysaccharide IPR002797 - Polysaccharide biosynthesis protein Rfer_0692 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_0693 acyl-coa IPR016181 - Acyl-CoA N-acyltransferase Rfer_0694 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_0694 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_0694 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_0694 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_0696 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0697 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_0697 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_0697 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_0697 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_0698 binding IPR009081 - Acyl carrier protein-like Rfer_0699 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_0699 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_0700 ornithine IPR000183 - Ornithine/DAP/Arg decarboxylase Rfer_0700 decarboxylase IPR000183 - Ornithine/DAP/Arg decarboxylase Rfer_0700 c-terminal IPR009006 - Alanine racemase/group IV decarboxylase, C-terminal Rfer_0700 decarboxylase IPR009006 - Alanine racemase/group IV decarboxylase, C-terminal Rfer_0700 barrel IPR029066 - PLP-binding barrel Rfer_0702 biosynthesis IPR017475 - Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Rfer_0703 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0703 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0703 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0703 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0703 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_0703 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_0703 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_0703 domain-like IPR029016 - GAF domain-like Rfer_0704 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0704 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0704 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0704 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0705 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_0708 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0708 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0708 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0708 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0710 peptidase IPR009003 - Trypsin-like cysteine/serine peptidase domain Rfer_0711 fold IPR014710 - RmlC-like jelly roll fold Rfer_0714 reductase IPR005913 - dTDP-4-dehydrorhamnose reductase Rfer_0716 hydrolase IPR003702 - Acetyl-CoA hydrolase/transferase Rfer_0716 transferase IPR003702 - Acetyl-CoA hydrolase/transferase Rfer_0720 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_0721 ribosomal IPR005822 - Ribosomal protein L13 Rfer_0722 ribosomal IPR000754 - Ribosomal protein S9 Rfer_0722 fold IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_0722 ribosomal IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_0728 synthetase IPR002305 - Aminoacyl-tRNA synthetase, class Ic Rfer_0728 aminoacyl-trna IPR002305 - Aminoacyl-tRNA synthetase, class Ic Rfer_0728 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0728 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0728 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0728 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0729 cation IPR002524 - Cation efflux protein Rfer_0729 efflux IPR002524 - Cation efflux protein Rfer_0732 domain-like IPR015946 - K homology domain-like, alpha/beta Rfer_0732 homology IPR015946 - K homology domain-like, alpha/beta Rfer_0732 beta IPR015946 - K homology domain-like, alpha/beta Rfer_0732 alpha IPR015946 - K homology domain-like, alpha/beta Rfer_0735 abc IPR003439 - ABC transporter-like Rfer_0735 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0735 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0735 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0735 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0736 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0736 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0736 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0736 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0738 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0738 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0738 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0738 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0743 methyltransferase IPR007318 - Phospholipid methyltransferase Rfer_0744 transmembrane IPR016174 - Di-haem cytochrome, transmembrane Rfer_0744 cytochrome IPR016174 - Di-haem cytochrome, transmembrane Rfer_0745 cytochrome IPR011031 - Multihaem cytochrome Rfer_0746 cytochrome IPR009056 - Cytochrome c-like domain Rfer_0746 c-like IPR009056 - Cytochrome c-like domain Rfer_0748 fold IPR012336 - Thioredoxin-like fold Rfer_0749 unknown IPR003746 - Protein of unknown function DUF167 Rfer_0750 ribosomal IPR003489 - Ribosomal protein S30Ae/sigma 54 modulation protein Rfer_0750 sigma IPR003489 - Ribosomal protein S30Ae/sigma 54 modulation protein Rfer_0751 phosphotransferase IPR016152 - Phosphotransferase/anion transporter Rfer_0751 transporter IPR016152 - Phosphotransferase/anion transporter Rfer_0752 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0752 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0752 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0752 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0752 domain-like IPR028979 - HPr(Ser) kinase/phosphorylase, N-terminal domain like Rfer_0752 phosphorylase IPR028979 - HPr(Ser) kinase/phosphorylase, N-terminal domain like Rfer_0752 kinase IPR028979 - HPr(Ser) kinase/phosphorylase, N-terminal domain like Rfer_0753 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0757 transport IPR003400 - Biopolymer transport protein ExbD/TolR Rfer_0758 synthetase IPR009008 - Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain Rfer_0758 aminoacyl-trna IPR009080 - Aminoacyl-tRNA synthetase, class 1a, anticodon-binding Rfer_0758 synthetase IPR009080 - Aminoacyl-tRNA synthetase, class 1a, anticodon-binding Rfer_0758 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0758 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0758 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0758 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0760 complex IPR008921 - DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Rfer_0760 gamma IPR008921 - DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Rfer_0760 c-terminal IPR008921 - DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Rfer_0760 dna IPR008921 - DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Rfer_0760 delta IPR008921 - DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Rfer_0760 polymerase IPR008921 - DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Rfer_0760 delta IPR008921 - DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Rfer_0760 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0760 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0760 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0760 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0761 dehydrogenase IPR016161 - Aldehyde/histidinol dehydrogenase Rfer_0762 cytochrome IPR009056 - Cytochrome c-like domain Rfer_0762 c-like IPR009056 - Cytochrome c-like domain Rfer_0764 potassium IPR003855 - K+ potassium transporter Rfer_0764 transporter IPR003855 - K+ potassium transporter Rfer_0765 fold IPR011761 - ATP-grasp fold Rfer_0765 subdomain IPR013816 - ATP-grasp fold, subdomain 2 Rfer_0765 fold IPR013816 - ATP-grasp fold, subdomain 2 Rfer_0767 coenzyme IPR004165 - Coenzyme A transferase family I Rfer_0767 transferase IPR004165 - Coenzyme A transferase family I Rfer_0768 hydrolase IPR011330 - Glycoside hydrolase/deacetylase, beta/alpha-barrel Rfer_0768 glycoside IPR011330 - Glycoside hydrolase/deacetylase, beta/alpha-barrel Rfer_0768 beta IPR011330 - Glycoside hydrolase/deacetylase, beta/alpha-barrel Rfer_0773 aminoacyl-trna IPR009080 - Aminoacyl-tRNA synthetase, class 1a, anticodon-binding Rfer_0773 synthetase IPR009080 - Aminoacyl-tRNA synthetase, class 1a, anticodon-binding Rfer_0773 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0773 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0773 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0773 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0775 fold IPR012336 - Thioredoxin-like fold Rfer_0777 abc IPR003439 - ABC transporter-like Rfer_0777 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0777 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0777 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0777 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0779 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_0780 domain-like IPR029060 - PIN domain-like Rfer_0781 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0781 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0781 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0781 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0782 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0785 major IPR020846 - Major facilitator superfamily domain Rfer_0785 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_0786 methyltransferase IPR007318 - Phospholipid methyltransferase Rfer_0791 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0791 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0791 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0791 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0793 secretion IPR004846 - Type II/III secretion system Rfer_0798 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0798 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0798 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0798 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0799 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0799 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0799 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0799 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0802 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_0803 barrel IPR013785 - Aldolase-type TIM barrel Rfer_0803 glutamate IPR024188 - Glutamate synthase large subunit-like protein Rfer_0803 large IPR024188 - Glutamate synthase large subunit-like protein Rfer_0803 synthase IPR024188 - Glutamate synthase large subunit-like protein Rfer_0805 fold IPR014710 - RmlC-like jelly roll fold Rfer_0806 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0807 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0812 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_0813 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_0813 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_0815 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0815 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0815 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0815 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0816 histidine IPR029033 - Histidine phosphatase superfamily Rfer_0816 phosphatase IPR029033 - Histidine phosphatase superfamily Rfer_0820 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0820 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0820 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0820 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0820 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0821 decarboxylase IPR000257 - Uroporphyrinogen decarboxylase (URO-D) Rfer_0822 helicase IPR014001 - Helicase, superfamily 1/2, ATP-binding domain Rfer_0822 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0822 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0822 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0822 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0825 c-terminal IPR016164 - FAD-linked oxidase-like, C-terminal Rfer_0826 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_0827 phosphoribosyltransferase IPR007229 - Nicotinate phosphoribosyltransferase family Rfer_0829 dna IPR010996 - DNA polymerase beta-like, N-terminal domain Rfer_0829 polymerase IPR010996 - DNA polymerase beta-like, N-terminal domain Rfer_0829 phosphatase-like IPR016195 - Polymerase/histidinol phosphatase-like Rfer_0829 polymerase IPR016195 - Polymerase/histidinol phosphatase-like Rfer_0831 fold IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_0831 ribosomal IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_0831 protease IPR027065 - Lon protease Rfer_0831 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0831 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0831 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0831 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0832 shock IPR013126 - Heat shock protein 70 family Rfer_0832 heat IPR013126 - Heat shock protein 70 family Rfer_0833 chaperone IPR008978 - HSP20-like chaperone Rfer_0836 domain-like IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0836 dehydrogenase IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0836 c-terminal IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0836 6-phosphogluconate IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0836 dehydrogenase IPR013328 - Dehydrogenase, multihelical Rfer_0836 6-phosphogluconate IPR013328 - Dehydrogenase, multihelical Rfer_0837 kinase-like IPR011009 - Protein kinase-like domain Rfer_0843 enzyme IPR001354 - Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase Rfer_0843 domain-like IPR029017 - Enolase N-terminal domain-like Rfer_0843 domain-like IPR029065 - Enolase C-terminal domain-like Rfer_0843 c-terminal IPR029065 - Enolase C-terminal domain-like Rfer_0844 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0846 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0847 hydrolase IPR027369 - DinB/YfiT-like putative metal-dependent hydrolase Rfer_0847 putative IPR027369 - DinB/YfiT-like putative metal-dependent hydrolase Rfer_0852 peptidase IPR000994 - Peptidase M24, structural domain Rfer_0852 peptidase IPR001714 - Peptidase M24, methionine aminopeptidase Rfer_0852 aminopeptidase IPR001714 - Peptidase M24, methionine aminopeptidase Rfer_0853 dna-binding IPR009061 - DNA binding domain, putative Rfer_0853 putative IPR009061 - DNA binding domain, putative Rfer_0854 atpase IPR001757 - Cation-transporting P-type ATPase Rfer_0854 heavy IPR006121 - Heavy metal-associated domain, HMA Rfer_0856 major IPR011701 - Major facilitator superfamily Rfer_0856 major IPR020846 - Major facilitator superfamily domain Rfer_0857 transporter IPR000412 - ABC-2 transporter Rfer_0858 transporter IPR000412 - ABC-2 transporter Rfer_0859 abc IPR003439 - ABC transporter-like Rfer_0859 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0859 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0859 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0859 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0860 abc IPR003439 - ABC transporter-like Rfer_0860 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0860 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0860 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0860 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0862 barrel IPR012349 - FMN-binding split barrel Rfer_0868 fold IPR011761 - ATP-grasp fold Rfer_0868 subdomain IPR013816 - ATP-grasp fold, subdomain 2 Rfer_0868 fold IPR013816 - ATP-grasp fold, subdomain 2 Rfer_0869 arginine IPR024946 - Arginine repressor C-terminal-like domain Rfer_0869 repressor IPR024946 - Arginine repressor C-terminal-like domain Rfer_0869 c-terminal-like IPR024946 - Arginine repressor C-terminal-like domain Rfer_0870 hydrolase IPR011330 - Glycoside hydrolase/deacetylase, beta/alpha-barrel Rfer_0870 glycoside IPR011330 - Glycoside hydrolase/deacetylase, beta/alpha-barrel Rfer_0870 beta IPR011330 - Glycoside hydrolase/deacetylase, beta/alpha-barrel Rfer_0871 peptidase IPR016125 - Peptidase C15, pyroglutamyl peptidase I-like Rfer_0871 peptidase IPR016125 - Peptidase C15, pyroglutamyl peptidase I-like Rfer_0874 c-terminal IPR008920 - Transcription regulator FadR/GntR, C-terminal Rfer_0874 transcription IPR008920 - Transcription regulator FadR/GntR, C-terminal Rfer_0874 regulator IPR008920 - Transcription regulator FadR/GntR, C-terminal Rfer_0874 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0878 periplasmic IPR029151 - Periplasmic sensor domain-like Rfer_0878 domain-like IPR029151 - Periplasmic sensor domain-like Rfer_0879 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0880 dehydrogenase IPR016161 - Aldehyde/histidinol dehydrogenase Rfer_0881 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_0882 enzyme IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_0882 thiamine IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_0882 c-terminal IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_0882 enzyme IPR012001 - Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Rfer_0882 thiamine IPR012001 - Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Rfer_0887 abc IPR000515 - MetI-like domain Rfer_0887 transmembrane IPR000515 - MetI-like domain Rfer_0887 transporter IPR000515 - MetI-like domain Rfer_0888 abc IPR000515 - MetI-like domain Rfer_0888 transmembrane IPR000515 - MetI-like domain Rfer_0888 transporter IPR000515 - MetI-like domain Rfer_0889 abc IPR003439 - ABC transporter-like Rfer_0889 binding IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_0889 c-terminal IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_0889 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0889 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0889 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0889 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0890 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0890 domain-like IPR029016 - GAF domain-like Rfer_0893 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0893 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0893 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0893 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0894 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0895 cyclase IPR029787 - Nucleotide cyclase Rfer_0895 nucleotide IPR029787 - Nucleotide cyclase Rfer_0896 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0896 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0896 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0896 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0896 periplasmic IPR029151 - Periplasmic sensor domain-like Rfer_0896 domain-like IPR029151 - Periplasmic sensor domain-like Rfer_0901 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0901 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0901 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0901 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0901 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_0901 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_0901 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_0904 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_0907 major IPR011701 - Major facilitator superfamily Rfer_0907 major IPR020846 - Major facilitator superfamily domain Rfer_0908 acyl IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_0908 acyl IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_0908 hydrolase IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_0908 transferase IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_0910 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0911 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_0911 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_0913 cytochrome IPR009056 - Cytochrome c-like domain Rfer_0913 c-like IPR009056 - Cytochrome c-like domain Rfer_0916 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0916 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0916 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0916 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_0919 phosphate IPR020831 - Glyceraldehyde/Erythrose phosphate dehydrogenase family Rfer_0919 dehydrogenase IPR020831 - Glyceraldehyde/Erythrose phosphate dehydrogenase family Rfer_0921 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0922 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0922 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0922 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0922 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_0922 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_0922 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_0922 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_0922 periplasmic IPR029151 - Periplasmic sensor domain-like Rfer_0922 domain-like IPR029151 - Periplasmic sensor domain-like Rfer_0923 symporter IPR001898 - Sodium/sulphate symporter Rfer_0923 sodium IPR001898 - Sodium/sulphate symporter Rfer_0928 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0929 barrel IPR029066 - PLP-binding barrel Rfer_0930 abc IPR003439 - ABC transporter-like Rfer_0930 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0930 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0930 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0930 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0931 abc IPR003439 - ABC transporter-like Rfer_0931 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0931 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0931 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0931 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0932 abc IPR000515 - MetI-like domain Rfer_0932 transmembrane IPR000515 - MetI-like domain Rfer_0932 transporter IPR000515 - MetI-like domain Rfer_0933 abc IPR000515 - MetI-like domain Rfer_0933 transmembrane IPR000515 - MetI-like domain Rfer_0933 transporter IPR000515 - MetI-like domain Rfer_0934 binding IPR030678 - Rfer_0934|Rfer_0934|REF_jgi:Rfer_0934|GeneID:3963688 Rfer_0934 peptide IPR030678 - Rfer_0934|Rfer_0934|REF_jgi:Rfer_0934|GeneID:3963688 Rfer_0938 barrel IPR013785 - Aldolase-type TIM barrel Rfer_0940 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_0941 kinase-like IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_0941 pyruvate IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_0943 fold IPR012336 - Thioredoxin-like fold Rfer_0945 barrel IPR012349 - FMN-binding split barrel Rfer_0950 barrel IPR013785 - Aldolase-type TIM barrel Rfer_0951 enzyme IPR001354 - Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase Rfer_0951 domain-like IPR029017 - Enolase N-terminal domain-like Rfer_0951 domain-like IPR029065 - Enolase C-terminal domain-like Rfer_0951 c-terminal IPR029065 - Enolase C-terminal domain-like Rfer_0952 abc IPR000515 - MetI-like domain Rfer_0952 transmembrane IPR000515 - MetI-like domain Rfer_0952 transporter IPR000515 - MetI-like domain Rfer_0953 abc IPR000515 - MetI-like domain Rfer_0953 transmembrane IPR000515 - MetI-like domain Rfer_0953 transporter IPR000515 - MetI-like domain Rfer_0955 abc IPR003439 - ABC transporter-like Rfer_0955 binding IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_0955 c-terminal IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_0955 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0955 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0955 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0955 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0956 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0956 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0956 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0956 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0957 dna-binding IPR010982 - Lambda repressor-like, DNA-binding domain Rfer_0957 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_0957 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_0957 binding IPR028082 - Periplasmic binding protein-like I Rfer_0959 (vitamin IPR006158 - Cobalamin (vitamin B12)-binding domain Rfer_0959 cobalamin IPR006158 - Cobalamin (vitamin B12)-binding domain Rfer_0959 radical IPR007197 - Radical SAM Rfer_0959 radical IPR023970 - Methylthiotransferase/radical SAM-type protein Rfer_0960 major IPR011701 - Major facilitator superfamily Rfer_0960 major IPR020846 - Major facilitator superfamily domain Rfer_0961 barrel IPR013785 - Aldolase-type TIM barrel Rfer_0964 barrel IPR029066 - PLP-binding barrel Rfer_0966 abc IPR000515 - MetI-like domain Rfer_0966 transmembrane IPR000515 - MetI-like domain Rfer_0966 transporter IPR000515 - MetI-like domain Rfer_0967 abc IPR000515 - MetI-like domain Rfer_0967 transmembrane IPR000515 - MetI-like domain Rfer_0967 transporter IPR000515 - MetI-like domain Rfer_0968 abc IPR003439 - ABC transporter-like Rfer_0968 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0968 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0968 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0968 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0968 amino IPR030679 - Rfer_0968|Rfer_0968|REF_jgi:Rfer_0968|GeneID:3963606 Rfer_0968 component IPR030679 - Rfer_0968|Rfer_0968|REF_jgi:Rfer_0968|GeneID:3963606 Rfer_0968 transport IPR030679 - Rfer_0968|Rfer_0968|REF_jgi:Rfer_0968|GeneID:3963606 Rfer_0968 atpase IPR030679 - Rfer_0968|Rfer_0968|REF_jgi:Rfer_0968|GeneID:3963606 Rfer_0968 acid IPR030679 - Rfer_0968|Rfer_0968|REF_jgi:Rfer_0968|GeneID:3963606 Rfer_0970 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0970 domain-like IPR029016 - GAF domain-like Rfer_0972 secretion IPR010290 - Transmembrane secretion effector Rfer_0972 effector IPR010290 - Transmembrane secretion effector Rfer_0972 transmembrane IPR010290 - Transmembrane secretion effector Rfer_0972 major IPR020846 - Major facilitator superfamily domain Rfer_0976 ornithine IPR003462 - Ornithine cyclodeaminase/mu-crystallin Rfer_0977 barrel IPR029066 - PLP-binding barrel Rfer_0979 domain-like IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0979 dehydrogenase IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0979 c-terminal IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0979 6-phosphogluconate IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_0979 dehydrogenase IPR013328 - Dehydrogenase, multihelical Rfer_0979 6-phosphogluconate IPR013328 - Dehydrogenase, multihelical Rfer_0981 abc IPR003439 - ABC transporter-like Rfer_0981 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0981 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0981 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0981 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0982 abc IPR003439 - ABC transporter-like Rfer_0982 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0982 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0982 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0982 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0983 abc IPR000515 - MetI-like domain Rfer_0983 transmembrane IPR000515 - MetI-like domain Rfer_0983 transporter IPR000515 - MetI-like domain Rfer_0984 abc IPR000515 - MetI-like domain Rfer_0984 transmembrane IPR000515 - MetI-like domain Rfer_0984 transporter IPR000515 - MetI-like domain Rfer_0985 binding IPR030678 - Rfer_0985|Rfer_0985|REF_jgi:Rfer_0985|GeneID:3963584 Rfer_0985 peptide IPR030678 - Rfer_0985|Rfer_0985|REF_jgi:Rfer_0985|GeneID:3963584 Rfer_0986 dehydrogenase IPR016161 - Aldehyde/histidinol dehydrogenase Rfer_0987 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0989 amidase IPR000120 - Amidase Rfer_0989 amidase IPR023631 - Amidase signature domain Rfer_0994 dehydrogenase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_0994 acyl-coa IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_0994 oxidase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_0994 c-terminal IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_0994 dehydrogenase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_0994 oxidase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_0994 acyl-coa IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_0996 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_0996 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_0996 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0996 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0996 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0996 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_0998 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_0998 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_1001 abc IPR003439 - ABC transporter-like Rfer_1001 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1001 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1001 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1001 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1002 abc IPR003439 - ABC transporter-like Rfer_1002 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1002 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1002 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1002 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1003 transporter IPR001851 - ABC transporter, permease Rfer_1003 abc IPR001851 - ABC transporter, permease Rfer_1003 permease IPR001851 - ABC transporter, permease Rfer_1004 transporter IPR001851 - ABC transporter, permease Rfer_1004 abc IPR001851 - ABC transporter, permease Rfer_1004 permease IPR001851 - ABC transporter, permease Rfer_1005 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_1005 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_1005 binding IPR028082 - Periplasmic binding protein-like I Rfer_1006 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_1006 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_1008 barrel IPR013785 - Aldolase-type TIM barrel Rfer_1011 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_1011 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_1011 transcriptional IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_1011 c-terminal IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_1011 regulator IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_1012 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_1012 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_1012 binding IPR028082 - Periplasmic binding protein-like I Rfer_1013 transporter IPR001851 - ABC transporter, permease Rfer_1013 abc IPR001851 - ABC transporter, permease Rfer_1013 permease IPR001851 - ABC transporter, permease Rfer_1014 transporter IPR001851 - ABC transporter, permease Rfer_1014 abc IPR001851 - ABC transporter, permease Rfer_1014 permease IPR001851 - ABC transporter, permease Rfer_1015 abc IPR003439 - ABC transporter-like Rfer_1015 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1015 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1015 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1015 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1016 abc IPR003439 - ABC transporter-like Rfer_1016 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1016 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1016 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1016 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1017 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_1017 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_1018 kinase-like IPR011009 - Protein kinase-like domain Rfer_1019 dehydrogenase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_1019 acyl-coa IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_1019 oxidase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_1019 c-terminal IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_1019 dehydrogenase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_1019 oxidase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_1019 acyl-coa IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_1020 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1020 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1020 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1020 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1021 cyclase IPR029787 - Nucleotide cyclase Rfer_1021 nucleotide IPR029787 - Nucleotide cyclase Rfer_1023 secretion IPR010290 - Transmembrane secretion effector Rfer_1023 effector IPR010290 - Transmembrane secretion effector Rfer_1023 transmembrane IPR010290 - Transmembrane secretion effector Rfer_1023 major IPR020846 - Major facilitator superfamily domain Rfer_1025 dehydrogenase IPR016161 - Aldehyde/histidinol dehydrogenase Rfer_1026 barrel IPR013785 - Aldolase-type TIM barrel Rfer_1028 domain-like IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_1028 dehydrogenase IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_1028 c-terminal IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_1028 6-phosphogluconate IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_1028 dehydrogenase IPR013328 - Dehydrogenase, multihelical Rfer_1028 6-phosphogluconate IPR013328 - Dehydrogenase, multihelical Rfer_1030 abc IPR003439 - ABC transporter-like Rfer_1030 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1030 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1030 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1030 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1030 amino IPR030679 - Rfer_1030|Rfer_1030|REF_jgi:Rfer_1030|GeneID:3963629 Rfer_1030 component IPR030679 - Rfer_1030|Rfer_1030|REF_jgi:Rfer_1030|GeneID:3963629 Rfer_1030 transport IPR030679 - Rfer_1030|Rfer_1030|REF_jgi:Rfer_1030|GeneID:3963629 Rfer_1030 atpase IPR030679 - Rfer_1030|Rfer_1030|REF_jgi:Rfer_1030|GeneID:3963629 Rfer_1030 acid IPR030679 - Rfer_1030|Rfer_1030|REF_jgi:Rfer_1030|GeneID:3963629 Rfer_1031 abc IPR000515 - MetI-like domain Rfer_1031 transmembrane IPR000515 - MetI-like domain Rfer_1031 transporter IPR000515 - MetI-like domain Rfer_1032 abc IPR000515 - MetI-like domain Rfer_1032 transmembrane IPR000515 - MetI-like domain Rfer_1032 transporter IPR000515 - MetI-like domain Rfer_1033 c-terminal IPR008920 - Transcription regulator FadR/GntR, C-terminal Rfer_1033 transcription IPR008920 - Transcription regulator FadR/GntR, C-terminal Rfer_1033 regulator IPR008920 - Transcription regulator FadR/GntR, C-terminal Rfer_1033 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1035 coenzyme IPR004165 - Coenzyme A transferase family I Rfer_1035 transferase IPR004165 - Coenzyme A transferase family I Rfer_1036 coenzyme IPR004165 - Coenzyme A transferase family I Rfer_1036 transferase IPR004165 - Coenzyme A transferase family I Rfer_1037 aminotransferase IPR001544 - Aminotransferase, class IV Rfer_1041 aminotransferase IPR005814 - Aminotransferase class-III Rfer_1041 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_1042 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1043 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1043 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1043 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1043 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1046 dna-binding IPR010982 - Lambda repressor-like, DNA-binding domain Rfer_1048 catalytic IPR024079 - Metallopeptidase, catalytic domain Rfer_1048 metallopeptidase IPR024079 - Metallopeptidase, catalytic domain Rfer_1050 domain-like IPR008979 - Galactose-binding domain-like Rfer_1051 barrel IPR012349 - FMN-binding split barrel Rfer_1053 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1053 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1053 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1053 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1055 endonuclease IPR011335 - Restriction endonuclease type II-like Rfer_1055 trna IPR011856 - tRNA endonuclease-like domain Rfer_1059 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_1062 helicase IPR014001 - Helicase, superfamily 1/2, ATP-binding domain Rfer_1062 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1062 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1062 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1062 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1073 unknown IPR011101 - Burkholderia phage phiE125, Gp37 Rfer_1075 abc IPR003439 - ABC transporter-like Rfer_1075 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1075 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1075 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1075 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1076 abc IPR003439 - ABC transporter-like Rfer_1076 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1076 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1076 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1076 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1077 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_1077 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_1077 binding IPR028082 - Periplasmic binding protein-like I Rfer_1078 transporter IPR001851 - ABC transporter, permease Rfer_1078 abc IPR001851 - ABC transporter, permease Rfer_1078 permease IPR001851 - ABC transporter, permease Rfer_1079 transporter IPR001851 - ABC transporter, permease Rfer_1079 abc IPR001851 - ABC transporter, permease Rfer_1079 permease IPR001851 - ABC transporter, permease Rfer_1081 barrel IPR011008 - Dimeric alpha-beta barrel Rfer_1081 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1082 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1082 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1082 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1082 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1082 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_1082 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_1082 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_1084 binding IPR029009 - Allosteric substrate binding domain Rfer_1086 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1089 c-terminal-like IPR010987 - Glutathione S-transferase, C-terminal-like Rfer_1089 fold IPR012336 - Thioredoxin-like fold Rfer_1091 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1092 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1092 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1092 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1092 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1092 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_1092 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_1092 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_1093 cyclase IPR029787 - Nucleotide cyclase Rfer_1093 nucleotide IPR029787 - Nucleotide cyclase Rfer_1094 abc IPR003439 - ABC transporter-like Rfer_1094 binding IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_1094 c-terminal IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_1094 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1094 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1094 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1094 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1095 abc IPR000515 - MetI-like domain Rfer_1095 transmembrane IPR000515 - MetI-like domain Rfer_1095 transporter IPR000515 - MetI-like domain Rfer_1096 abc IPR000515 - MetI-like domain Rfer_1096 transmembrane IPR000515 - MetI-like domain Rfer_1096 transporter IPR000515 - MetI-like domain Rfer_1098 exchanger IPR006153 - Cation/H+ exchanger Rfer_1098 cation IPR006153 - Cation/H+ exchanger Rfer_1100 abc IPR000515 - MetI-like domain Rfer_1100 transmembrane IPR000515 - MetI-like domain Rfer_1100 transporter IPR000515 - MetI-like domain Rfer_1101 abc IPR000515 - MetI-like domain Rfer_1101 transmembrane IPR000515 - MetI-like domain Rfer_1101 transporter IPR000515 - MetI-like domain Rfer_1102 hydrolase IPR001360 - Glycoside hydrolase, family 1 Rfer_1102 glycoside IPR001360 - Glycoside hydrolase, family 1 Rfer_1102 hydrolase IPR017853 - Glycoside hydrolase, superfamily Rfer_1102 glycoside IPR017853 - Glycoside hydrolase, superfamily Rfer_1103 abc IPR003439 - ABC transporter-like Rfer_1103 binding IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_1103 c-terminal IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_1103 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1103 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1103 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1103 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1104 hydrolase IPR017853 - Glycoside hydrolase, superfamily Rfer_1104 glycoside IPR017853 - Glycoside hydrolase, superfamily Rfer_1105 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_1105 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_1105 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_1105 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_1106 hydrolase IPR013780 - Glycosyl hydrolase, family 13, all-beta Rfer_1106 glycosyl IPR013780 - Glycosyl hydrolase, family 13, all-beta Rfer_1106 hydrolase IPR017853 - Glycoside hydrolase, superfamily Rfer_1106 glycoside IPR017853 - Glycoside hydrolase, superfamily Rfer_1107 abc IPR003439 - ABC transporter-like Rfer_1107 binding IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_1107 c-terminal IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_1107 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1107 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1107 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1107 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1108 abc IPR000515 - MetI-like domain Rfer_1108 transmembrane IPR000515 - MetI-like domain Rfer_1108 transporter IPR000515 - MetI-like domain Rfer_1109 abc IPR000515 - MetI-like domain Rfer_1109 transmembrane IPR000515 - MetI-like domain Rfer_1109 transporter IPR000515 - MetI-like domain Rfer_1111 hydrolase IPR001360 - Glycoside hydrolase, family 1 Rfer_1111 glycoside IPR001360 - Glycoside hydrolase, family 1 Rfer_1111 hydrolase IPR017853 - Glycoside hydrolase, superfamily Rfer_1111 glycoside IPR017853 - Glycoside hydrolase, superfamily Rfer_1112 dna-binding IPR010982 - Lambda repressor-like, DNA-binding domain Rfer_1112 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_1112 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_1112 binding IPR028082 - Periplasmic binding protein-like I Rfer_1113 hydrolase IPR017853 - Glycoside hydrolase, superfamily Rfer_1113 glycoside IPR017853 - Glycoside hydrolase, superfamily Rfer_1116 beta IPR017946 - PLC-like phosphodiesterase, TIM beta/alpha-barrel domain Rfer_1116 phosphodiesterase IPR017946 - PLC-like phosphodiesterase, TIM beta/alpha-barrel domain Rfer_1118 transport IPR003400 - Biopolymer transport protein ExbD/TolR Rfer_1119 transport IPR003400 - Biopolymer transport protein ExbD/TolR Rfer_1122 fold IPR014710 - RmlC-like jelly roll fold Rfer_1123 fold IPR012336 - Thioredoxin-like fold Rfer_1124 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1126 aldolase IPR001585 - Transaldolase Rfer_1126 barrel IPR013785 - Aldolase-type TIM barrel Rfer_1128 subfamily IPR006439 - HAD hydrolase, subfamily IA Rfer_1128 hydrolase IPR006439 - HAD hydrolase, subfamily IA Rfer_1129 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_1129 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_1129 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_1129 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_1135 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1136 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1136 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1136 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1136 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1136 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_1136 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_1136 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_1138 ribonuclease IPR012337 - Ribonuclease H-like domain Rfer_1143 heavy IPR006121 - Heavy metal-associated domain, HMA Rfer_1144 atpase IPR001757 - Cation-transporting P-type ATPase Rfer_1144 heavy IPR006121 - Heavy metal-associated domain, HMA Rfer_1154 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1155 channel IPR001807 - Chloride channel, voltage gated Rfer_1158 transport IPR003400 - Biopolymer transport protein ExbD/TolR Rfer_1160 fold IPR012336 - Thioredoxin-like fold Rfer_1161 alpha IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Rfer_1161 atpase IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Rfer_1161 beta IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Rfer_1161 complex IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Rfer_1161 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1161 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1161 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1161 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1162 epsilon IPR001469 - ATPase, F1 complex, delta/epsilon subunit Rfer_1162 delta IPR001469 - ATPase, F1 complex, delta/epsilon subunit Rfer_1162 synthase IPR001469 - ATPase, F1 complex, delta/epsilon subunit Rfer_1162 complex IPR001469 - ATPase, F1 complex, delta/epsilon subunit Rfer_1162 atp IPR001469 - ATPase, F1 complex, delta/epsilon subunit Rfer_1165 synthase IPR000568 - ATPase, F0 complex, subunit A Rfer_1165 complex IPR000568 - ATPase, F0 complex, subunit A Rfer_1165 atp IPR000568 - ATPase, F0 complex, subunit A Rfer_1166 synthase IPR000454 - ATPase, F0 complex, subunit C Rfer_1166 atp IPR000454 - ATPase, F0 complex, subunit C Rfer_1166 complex IPR000454 - ATPase, F0 complex, subunit C Rfer_1167 bacterial IPR002146 - ATPase, F0 complex, subunit B/B', bacterial/chloroplast Rfer_1167 synthase IPR002146 - ATPase, F0 complex, subunit B/B', bacterial/chloroplast Rfer_1167 complex IPR002146 - ATPase, F0 complex, subunit B/B', bacterial/chloroplast Rfer_1167 atp IPR002146 - ATPase, F0 complex, subunit B/B', bacterial/chloroplast Rfer_1168 alpha IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Rfer_1168 atpase IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Rfer_1168 beta IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Rfer_1168 complex IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Rfer_1168 atp IPR005294 - ATPase, F1 complex, alpha subunit Rfer_1168 alpha IPR005294 - ATPase, F1 complex, alpha subunit Rfer_1168 synthase IPR005294 - ATPase, F1 complex, alpha subunit Rfer_1168 complex IPR005294 - ATPase, F1 complex, alpha subunit Rfer_1168 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1168 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1168 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1168 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1169 synthase IPR000131 - ATPase, F1 complex, gamma subunit Rfer_1169 atp IPR000131 - ATPase, F1 complex, gamma subunit Rfer_1169 complex IPR000131 - ATPase, F1 complex, gamma subunit Rfer_1169 gamma IPR000131 - ATPase, F1 complex, gamma subunit Rfer_1174 endonuclease IPR011335 - Restriction endonuclease type II-like Rfer_1174 trna IPR011856 - tRNA endonuclease-like domain Rfer_1176 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1176 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1176 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1176 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1190 ribonuclease IPR012337 - Ribonuclease H-like domain Rfer_1193 fold IPR012336 - Thioredoxin-like fold Rfer_1196 dna IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_1196 catalytic IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_1196 core IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_1196 enzyme IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_1196 catalytic IPR013762 - Integrase-like, catalytic core Rfer_1202 dna IPR000212 - DNA helicase, UvrD/REP type Rfer_1202 helicase IPR000212 - DNA helicase, UvrD/REP type Rfer_1202 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1202 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1202 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1202 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1204 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1204 factor IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_1204 polymerase IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_1204 sigma IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_1204 rna IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_1206 secretion IPR010290 - Transmembrane secretion effector Rfer_1206 effector IPR010290 - Transmembrane secretion effector Rfer_1206 transmembrane IPR010290 - Transmembrane secretion effector Rfer_1206 major IPR020846 - Major facilitator superfamily domain Rfer_1207 peptidase IPR021109 - Aspartic peptidase domain Rfer_1208 nuclease IPR003615 - HNH nuclease Rfer_1209 histidine IPR001310 - Histidine triad (HIT) protein Rfer_1211 fold IPR012336 - Thioredoxin-like fold Rfer_1212 endonuclease IPR001604 - DNA/RNA non-specific endonuclease Rfer_1212 rna IPR001604 - DNA/RNA non-specific endonuclease Rfer_1212 dna IPR001604 - DNA/RNA non-specific endonuclease Rfer_1215 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1216 hydrolase IPR003702 - Acetyl-CoA hydrolase/transferase Rfer_1216 transferase IPR003702 - Acetyl-CoA hydrolase/transferase Rfer_1220 major IPR011701 - Major facilitator superfamily Rfer_1220 major IPR020846 - Major facilitator superfamily domain Rfer_1221 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1225 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1225 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1225 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1225 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1227 polymerase IPR004805 - DNA polymerase III, alpha subunit Rfer_1227 alpha IPR004805 - DNA polymerase III, alpha subunit Rfer_1227 dna IPR004805 - DNA polymerase III, alpha subunit Rfer_1227 phosphatase-like IPR016195 - Polymerase/histidinol phosphatase-like Rfer_1227 polymerase IPR016195 - Polymerase/histidinol phosphatase-like Rfer_1230 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_1230 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_1230 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_1230 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_1231 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_1236 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1239 aminotransferase IPR000653 - DegT/DnrJ/EryC1/StrS aminotransferase Rfer_1239 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_1240 biosynthesis IPR002797 - Polysaccharide biosynthesis protein Rfer_1240 polysaccharide IPR002797 - Polysaccharide biosynthesis protein Rfer_1241 kinase-like IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_1241 pyruvate IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_1243 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_1246 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_1246 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_1252 fold IPR014710 - RmlC-like jelly roll fold Rfer_1253 aminotransferase IPR000653 - DegT/DnrJ/EryC1/StrS aminotransferase Rfer_1253 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_1254 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1254 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1254 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1254 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1266 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_1267 synthetase IPR000092 - Polyprenyl synthetase Rfer_1267 synthase IPR008949 - Terpenoid synthase Rfer_1268 ribosomal IPR028909 - Ribosomal protein L21-like Rfer_1270 binding IPR006073 - GTP binding domain Rfer_1270 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1270 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1270 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1270 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1271 kinase IPR001048 - Aspartate/glutamate/uridylate kinase Rfer_1271 glutamate IPR001048 - Aspartate/glutamate/uridylate kinase Rfer_1271 glutamate IPR001057 - Glutamate/acetylglutamate kinase Rfer_1271 kinase IPR001057 - Glutamate/acetylglutamate kinase Rfer_1273 hydrolase IPR015797 - NUDIX hydrolase domain-like Rfer_1273 domain-like IPR015797 - NUDIX hydrolase domain-like Rfer_1274 iia IPR002316 - Proline-tRNA ligase, class IIa Rfer_1274 ligase IPR002316 - Proline-tRNA ligase, class IIa Rfer_1274 aminoacyl-trna IPR006195 - Aminoacyl-tRNA synthetase, class II Rfer_1274 synthetase IPR006195 - Aminoacyl-tRNA synthetase, class II Rfer_1276 fold IPR012336 - Thioredoxin-like fold Rfer_1277 isomerase IPR023566 - Peptidyl-prolyl cis-trans isomerase, FKBP-type Rfer_1278 dna IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_1278 catalytic IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_1278 core IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_1278 enzyme IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_1278 catalytic IPR013762 - Integrase-like, catalytic core Rfer_1279 modification IPR004556 - Modification methylase HemK Rfer_1279 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_1280 rna-binding IPR014720 - Double-stranded RNA-binding domain Rfer_1283 beta IPR017946 - PLC-like phosphodiesterase, TIM beta/alpha-barrel domain Rfer_1283 phosphodiesterase IPR017946 - PLC-like phosphodiesterase, TIM beta/alpha-barrel domain Rfer_1284 abc IPR003439 - ABC transporter-like Rfer_1284 binding IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_1284 c-terminal IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_1284 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1284 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1284 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1284 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1285 abc IPR000515 - MetI-like domain Rfer_1285 transmembrane IPR000515 - MetI-like domain Rfer_1285 transporter IPR000515 - MetI-like domain Rfer_1286 abc IPR000515 - MetI-like domain Rfer_1286 transmembrane IPR000515 - MetI-like domain Rfer_1286 transporter IPR000515 - MetI-like domain Rfer_1288 c-terminal IPR016164 - FAD-linked oxidase-like, C-terminal Rfer_1289 histidine IPR001310 - Histidine triad (HIT) protein Rfer_1291 methyltransferase IPR004033 - UbiE/COQ5 methyltransferase Rfer_1291 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_1294 kinase-like IPR011009 - Protein kinase-like domain Rfer_1297 aminoacyl-trna IPR006195 - Aminoacyl-tRNA synthetase, class II Rfer_1297 synthetase IPR006195 - Aminoacyl-tRNA synthetase, class II Rfer_1297 synthetase IPR018150 - Aminoacyl-tRNA synthetase, class II (D/K/N)-like Rfer_1297 aminoacyl-trna IPR018150 - Aminoacyl-tRNA synthetase, class II (D/K/N)-like Rfer_1298 hydrolase IPR015797 - NUDIX hydrolase domain-like Rfer_1298 domain-like IPR015797 - NUDIX hydrolase domain-like Rfer_1299 endonuclease IPR005135 - Endonuclease/exonuclease/phosphatase Rfer_1299 phosphatase IPR005135 - Endonuclease/exonuclease/phosphatase Rfer_1304 binding IPR025501 - ATP binding protein MinD Rfer_1304 atp IPR025501 - ATP binding protein MinD Rfer_1304 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1304 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1304 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1304 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1305 cyclase IPR029787 - Nucleotide cyclase Rfer_1305 nucleotide IPR029787 - Nucleotide cyclase Rfer_1308 peptidase IPR004447 - C-terminal-processing peptidase S41A Rfer_1309 histidine IPR029033 - Histidine phosphatase superfamily Rfer_1309 phosphatase IPR029033 - Histidine phosphatase superfamily Rfer_1311 fold IPR012336 - Thioredoxin-like fold Rfer_1313 dehydrogenase IPR006168 - Glycerol-3-phosphate dehydrogenase, NAD-dependent Rfer_1313 domain-like IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_1313 dehydrogenase IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_1313 c-terminal IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_1313 6-phosphogluconate IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_1313 dehydrogenase IPR013328 - Dehydrogenase, multihelical Rfer_1313 6-phosphogluconate IPR013328 - Dehydrogenase, multihelical Rfer_1314 fold IPR011761 - ATP-grasp fold Rfer_1314 subdomain IPR013816 - ATP-grasp fold, subdomain 2 Rfer_1314 fold IPR013816 - ATP-grasp fold, subdomain 2 Rfer_1315 fold IPR011761 - ATP-grasp fold Rfer_1315 subdomain IPR013816 - ATP-grasp fold, subdomain 2 Rfer_1315 fold IPR013816 - ATP-grasp fold, subdomain 2 Rfer_1316 abc IPR003439 - ABC transporter-like Rfer_1316 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1316 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1316 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1316 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1318 barrel IPR013785 - Aldolase-type TIM barrel Rfer_1318 putative IPR027277 - Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Rfer_1319 synthetase IPR003473 - Quinolinate synthetase A Rfer_1323 kinase-like IPR011009 - Protein kinase-like domain Rfer_1325 dna IPR002298 - DNA polymerase A Rfer_1325 polymerase IPR002298 - DNA polymerase A Rfer_1325 ribonuclease IPR012337 - Ribonuclease H-like domain Rfer_1325 domain-like IPR029060 - PIN domain-like Rfer_1326 phosphatase-like IPR029052 - Metallo-dependent phosphatase-like Rfer_1327 enzyme IPR000277 - Cys/Met metabolism, pyridoxal phosphate-dependent enzyme Rfer_1327 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_1328 beta IPR023026 - Tryptophan synthase beta chain/beta chain-like Rfer_1328 tryptophan IPR023026 - Tryptophan synthase beta chain/beta chain-like Rfer_1328 synthase IPR023026 - Tryptophan synthase beta chain/beta chain-like Rfer_1328 beta IPR023026 - Tryptophan synthase beta chain/beta chain-like Rfer_1328 chain IPR023026 - Tryptophan synthase beta chain/beta chain-like Rfer_1329 subfamily IPR006383 - HAD-superfamily hydrolase, subfamily IB, PSPase-like Rfer_1329 had-superfamily IPR006383 - HAD-superfamily hydrolase, subfamily IB, PSPase-like Rfer_1329 hydrolase IPR006383 - HAD-superfamily hydrolase, subfamily IB, PSPase-like Rfer_1331 helicase IPR014001 - Helicase, superfamily 1/2, ATP-binding domain Rfer_1331 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1331 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1331 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1331 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1334 barrel IPR013785 - Aldolase-type TIM barrel Rfer_1335 kinase-like IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_1335 pyruvate IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_1336 aminoacyl-trna IPR006195 - Aminoacyl-tRNA synthetase, class II Rfer_1336 synthetase IPR006195 - Aminoacyl-tRNA synthetase, class II Rfer_1338 ribosomal IPR021137 - Ribosomal protein L35 Rfer_1340 alpha IPR004529 - Phenylalanyl-tRNA synthetase, class IIc, alpha subunit Rfer_1340 synthetase IPR004529 - Phenylalanyl-tRNA synthetase, class IIc, alpha subunit Rfer_1340 aminoacyl-trna IPR006195 - Aminoacyl-tRNA synthetase, class II Rfer_1340 synthetase IPR006195 - Aminoacyl-tRNA synthetase, class II Rfer_1341 dna-binding IPR009061 - DNA binding domain, putative Rfer_1341 putative IPR009061 - DNA binding domain, putative Rfer_1342 dna-binding IPR000119 - Histone-like bacterial DNA-binding protein Rfer_1343 dna-binding IPR009061 - DNA binding domain, putative Rfer_1343 putative IPR009061 - DNA binding domain, putative Rfer_1344 phosphatase-like IPR029052 - Metallo-dependent phosphatase-like Rfer_1345 isomerase IPR002130 - Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain Rfer_1346 isomerase IPR002130 - Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain Rfer_1348 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_1349 aminoacyl-trna IPR009080 - Aminoacyl-tRNA synthetase, class 1a, anticodon-binding Rfer_1349 synthetase IPR009080 - Aminoacyl-tRNA synthetase, class 1a, anticodon-binding Rfer_1349 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1349 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1349 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1349 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1349 ligase IPR024909 - Cysteinyl-tRNA synthetase/mycothiol ligase Rfer_1349 synthetase IPR024909 - Cysteinyl-tRNA synthetase/mycothiol ligase Rfer_1350 glycosylase IPR011257 - DNA glycosylase Rfer_1350 dna IPR011257 - DNA glycosylase Rfer_1352 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1352 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1352 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1352 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1353 kinase IPR001048 - Aspartate/glutamate/uridylate kinase Rfer_1353 glutamate IPR001048 - Aspartate/glutamate/uridylate kinase Rfer_1353 glutamate IPR001057 - Glutamate/acetylglutamate kinase Rfer_1353 kinase IPR001057 - Glutamate/acetylglutamate kinase Rfer_1354 dna IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_1354 catalytic IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_1354 core IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_1354 enzyme IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_1354 catalytic IPR013762 - Integrase-like, catalytic core Rfer_1355 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1355 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1355 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1355 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1365 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_1367 helicase IPR014001 - Helicase, superfamily 1/2, ATP-binding domain Rfer_1367 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1367 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1367 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1367 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1369 aminotransferase IPR005814 - Aminotransferase class-III Rfer_1369 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_1370 fold IPR004039 - Rubredoxin-type fold Rfer_1375 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1375 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1375 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1375 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1375 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_1375 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_1375 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_1376 dna IPR002081 - Cryptochrome/DNA photolyase, class 1 Rfer_1376 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1376 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1376 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1376 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1378 ribonuclease IPR012337 - Ribonuclease H-like domain Rfer_1380 ornithine IPR006130 - Aspartate/ornithine carbamoyltransferase Rfer_1382 translation IPR009000 - Translation protein, beta-barrel domain Rfer_1382 beta-barrel IPR009000 - Translation protein, beta-barrel domain Rfer_1382 elongation IPR009022 - Elongation factor G, III-V domain Rfer_1382 factor IPR009022 - Elongation factor G, III-V domain Rfer_1382 fold IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_1382 ribosomal IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_1382 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1382 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1382 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1382 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1388 binding IPR006073 - GTP binding domain Rfer_1388 gtpase IPR016478 - GTPase, MTG1 Rfer_1388 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1388 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1388 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1388 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1392 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1392 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1392 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1392 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1394 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1396 ribosomal IPR003489 - Ribosomal protein S30Ae/sigma 54 modulation protein Rfer_1396 sigma IPR003489 - Ribosomal protein S30Ae/sigma 54 modulation protein Rfer_1397 exchanger IPR006153 - Cation/H+ exchanger Rfer_1397 cation IPR006153 - Cation/H+ exchanger Rfer_1398 putative IPR018445 - Putitive phosphate transport regulator Rfer_1398 phosphate IPR018445 - Putitive phosphate transport regulator Rfer_1398 transport IPR018445 - Putitive phosphate transport regulator Rfer_1398 regulator IPR018445 - Putitive phosphate transport regulator Rfer_1401 acyl-coa IPR016181 - Acyl-CoA N-acyltransferase Rfer_1402 ribosomal IPR000307 - Ribosomal protein S16 Rfer_1403 translation IPR009000 - Translation protein, beta-barrel domain Rfer_1403 beta-barrel IPR009000 - Translation protein, beta-barrel domain Rfer_1404 trna IPR016009 - tRNA methyltransferase TRMD/TRM10-type domain Rfer_1404 methyltransferase IPR016009 - tRNA methyltransferase TRMD/TRM10-type domain Rfer_1404 alpha IPR029028 - Alpha/beta knot methyltransferases Rfer_1404 beta IPR029028 - Alpha/beta knot methyltransferases Rfer_1405 translation IPR008991 - Translation protein SH3-like domain Rfer_1406 hydrolase IPR015797 - NUDIX hydrolase domain-like Rfer_1406 domain-like IPR015797 - NUDIX hydrolase domain-like Rfer_1408 aminotransferase IPR005861 - Histidinol-phosphate aminotransferase family Rfer_1408 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_1409 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1409 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1409 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1409 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1412 ribonuclease IPR012337 - Ribonuclease H-like domain Rfer_1413 helicase IPR014001 - Helicase, superfamily 1/2, ATP-binding domain Rfer_1413 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1413 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1413 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1413 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1420 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_1421 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_1424 phosphate IPR002505 - Phosphate acetyl/butaryl transferase Rfer_1424 transferase IPR002505 - Phosphate acetyl/butaryl transferase Rfer_1427 cyclase IPR029787 - Nucleotide cyclase Rfer_1427 nucleotide IPR029787 - Nucleotide cyclase Rfer_1428 transporter IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_1428 receptor IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_1428 solute IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_1429 dehydrogenase IPR002085 - Alcohol dehydrogenase superfamily, zinc-type Rfer_1432 ligase IPR002301 - Isoleucine-tRNA ligase Rfer_1432 synthetase IPR009008 - Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain Rfer_1432 aminoacyl-trna IPR009080 - Aminoacyl-tRNA synthetase, class 1a, anticodon-binding Rfer_1432 synthetase IPR009080 - Aminoacyl-tRNA synthetase, class 1a, anticodon-binding Rfer_1432 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1432 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1432 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1432 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1433 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1433 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1433 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1433 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1433 kinase IPR023465 - Riboflavin kinase domain Rfer_1433 kinase IPR023468 - Riboflavin kinase Rfer_1434 nuclease IPR003615 - HNH nuclease Rfer_1438 cytochrome IPR009056 - Cytochrome c-like domain Rfer_1438 c-like IPR009056 - Cytochrome c-like domain Rfer_1440 symporter IPR001991 - Sodium:dicarboxylate symporter Rfer_1441 barrel IPR012349 - FMN-binding split barrel Rfer_1443 unknown IPR007402 - Protein of unknown function DUF455 Rfer_1444 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_1444 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_1444 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_1444 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_1455 cytochrome IPR010980 - Cytochrome c/b562 Rfer_1456 cyclase IPR029787 - Nucleotide cyclase Rfer_1456 nucleotide IPR029787 - Nucleotide cyclase Rfer_1457 complex IPR008921 - DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Rfer_1457 gamma IPR008921 - DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Rfer_1457 c-terminal IPR008921 - DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Rfer_1457 dna IPR008921 - DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Rfer_1457 delta IPR008921 - DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Rfer_1457 polymerase IPR008921 - DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Rfer_1457 delta IPR008921 - DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Rfer_1457 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1457 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1457 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1457 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1463 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_1464 ribonuclease IPR012337 - Ribonuclease H-like domain Rfer_1465 symporter IPR001898 - Sodium/sulphate symporter Rfer_1465 sodium IPR001898 - Sodium/sulphate symporter Rfer_1468 radical IPR007197 - Radical SAM Rfer_1468 barrel IPR013785 - Aldolase-type TIM barrel Rfer_1474 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_1474 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_1474 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_1474 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_1477 c-terminal IPR016164 - FAD-linked oxidase-like, C-terminal Rfer_1479 atp-dependent IPR022953 - Phosphofructokinase Rfer_1483 transporter IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_1483 receptor IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_1483 solute IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_1484 transporter IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_1484 receptor IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_1484 solute IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_1485 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1485 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1485 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1485 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1485 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_1485 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_1485 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_1486 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1487 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_1487 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_1487 binding IPR028082 - Periplasmic binding protein-like I Rfer_1488 ribosomal IPR000589 - Ribosomal protein S15 Rfer_1488 rna-binding IPR009068 - S15/NS1, RNA-binding Rfer_1489 homology IPR004087 - K Homology domain Rfer_1489 fold IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_1489 ribosomal IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_1490 dehydrogenase IPR002085 - Alcohol dehydrogenase superfamily, zinc-type Rfer_1491 isomerase IPR000652 - Triosephosphate isomerase Rfer_1491 barrel IPR013785 - Aldolase-type TIM barrel Rfer_1493 chain IPR000440 - NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 Rfer_1493 oxidoreductase IPR000440 - NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 Rfer_1496 oxidoreductase IPR022885 - NAD(P)H-quinone oxidoreductase subunit D/H Rfer_1497 oxidoreductase IPR002023 - NADH-quinone oxidoreductase subunit E-like Rfer_1497 fold IPR012336 - Thioredoxin-like fold Rfer_1501 chain IPR010226 - NADH-quinone oxidoreductase, chain I Rfer_1501 oxidoreductase IPR010226 - NADH-quinone oxidoreductase, chain I Rfer_1503 oxidoreductase IPR001133 - NADH-ubiquinone oxidoreductase chain 4L/K Rfer_1503 chain IPR001133 - NADH-ubiquinone oxidoreductase chain 4L/K Rfer_1505 oxidoreductase IPR003918 - NADH:ubiquinone oxidoreductase Rfer_1507 hydrolase IPR015797 - NUDIX hydrolase domain-like Rfer_1507 domain-like IPR015797 - NUDIX hydrolase domain-like Rfer_1509 dehydrogenase IPR028971 - NAD-glutamate dehydrogenase Rfer_1512 abc IPR003439 - ABC transporter-like Rfer_1512 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1512 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1512 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1512 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1513 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1514 outer IPR003423 - Outer membrane efflux protein Rfer_1514 efflux IPR003423 - Outer membrane efflux protein Rfer_1514 membrane IPR003423 - Outer membrane efflux protein Rfer_1515 membrane IPR006143 - RND efflux pump, membrane fusion protein Rfer_1515 pump IPR006143 - RND efflux pump, membrane fusion protein Rfer_1515 efflux IPR006143 - RND efflux pump, membrane fusion protein Rfer_1516 major IPR011701 - Major facilitator superfamily Rfer_1516 major IPR020846 - Major facilitator superfamily domain Rfer_1521 abc IPR003439 - ABC transporter-like Rfer_1521 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1521 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1521 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1521 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1521 amino IPR030679 - Rfer_1521|Rfer_1521|REF_jgi:Rfer_1521|GeneID:3960675 Rfer_1521 component IPR030679 - Rfer_1521|Rfer_1521|REF_jgi:Rfer_1521|GeneID:3960675 Rfer_1521 transport IPR030679 - Rfer_1521|Rfer_1521|REF_jgi:Rfer_1521|GeneID:3960675 Rfer_1521 atpase IPR030679 - Rfer_1521|Rfer_1521|REF_jgi:Rfer_1521|GeneID:3960675 Rfer_1521 acid IPR030679 - Rfer_1521|Rfer_1521|REF_jgi:Rfer_1521|GeneID:3960675 Rfer_1523 abc IPR000515 - MetI-like domain Rfer_1523 transmembrane IPR000515 - MetI-like domain Rfer_1523 transporter IPR000515 - MetI-like domain Rfer_1524 abc IPR000515 - MetI-like domain Rfer_1524 transmembrane IPR000515 - MetI-like domain Rfer_1524 transporter IPR000515 - MetI-like domain Rfer_1526 cyclase IPR029787 - Nucleotide cyclase Rfer_1526 nucleotide IPR029787 - Nucleotide cyclase Rfer_1528 barrel IPR013785 - Aldolase-type TIM barrel Rfer_1529 acyl-coa IPR006684 - Acyl-CoA thioester hydrolase YbgC/YbaW family Rfer_1529 hydrolase IPR006684 - Acyl-CoA thioester hydrolase YbgC/YbaW family Rfer_1532 transport IPR003400 - Biopolymer transport protein ExbD/TolR Rfer_1533 transport IPR003400 - Biopolymer transport protein ExbD/TolR Rfer_1534 abc IPR003439 - ABC transporter-like Rfer_1534 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1534 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1534 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1534 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1535 trna IPR018022 - tRNA delta(2)-isopentenylpyrophosphate transferase Rfer_1535 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1535 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1535 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1535 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1536 major IPR011701 - Major facilitator superfamily Rfer_1536 major IPR020846 - Major facilitator superfamily domain Rfer_1537 chaperone IPR008978 - HSP20-like chaperone Rfer_1538 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1538 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1538 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1538 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1539 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1540 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1540 fold IPR014710 - RmlC-like jelly roll fold Rfer_1541 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1541 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1541 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1541 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1542 domain-like IPR029060 - PIN domain-like Rfer_1543 endonuclease IPR011335 - Restriction endonuclease type II-like Rfer_1543 trna IPR011856 - tRNA endonuclease-like domain Rfer_1544 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1544 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1544 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1544 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1546 aminotransferase IPR001544 - Aminotransferase, class IV Rfer_1549 synthase IPR002060 - Squalene/phytoene synthase Rfer_1549 synthase IPR008949 - Terpenoid synthase Rfer_1550 synthase IPR002060 - Squalene/phytoene synthase Rfer_1550 synthase IPR008949 - Terpenoid synthase Rfer_1551 membrane IPR006143 - RND efflux pump, membrane fusion protein Rfer_1551 pump IPR006143 - RND efflux pump, membrane fusion protein Rfer_1551 efflux IPR006143 - RND efflux pump, membrane fusion protein Rfer_1552 resistance IPR001036 - Acriflavin resistance protein Rfer_1553 factor IPR027304 - Trigger factor/SurA domain Rfer_1554 protease IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA Rfer_1555 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1555 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1555 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1555 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1556 fold IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_1556 ribosomal IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_1556 protease IPR027065 - Lon protease Rfer_1556 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1556 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1556 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1556 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1557 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1557 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1557 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1557 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1558 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1558 factor IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_1558 polymerase IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_1558 sigma IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_1558 rna IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_1558 rna IPR014284 - RNA polymerase sigma-70 like domain Rfer_1558 polymerase IPR014284 - RNA polymerase sigma-70 like domain Rfer_1560 cyclase IPR029787 - Nucleotide cyclase Rfer_1560 nucleotide IPR029787 - Nucleotide cyclase Rfer_1563 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_1565 dna-binding IPR000119 - Histone-like bacterial DNA-binding protein Rfer_1567 phosphate IPR013792 - RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Rfer_1567 rna IPR013792 - RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Rfer_1567 alpha IPR013792 - RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Rfer_1567 cyclase IPR013792 - RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Rfer_1567 beta IPR013792 - RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Rfer_1567 transferase IPR013792 - RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Rfer_1567 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1567 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1567 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1567 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1568 domain-like IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_1568 dehydrogenase IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_1568 c-terminal IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_1568 6-phosphogluconate IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_1570 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_1570 aminotransferase IPR022278 - Phosphoserine aminotransferase Rfer_1571 dna IPR013760 - DNA topoisomerase, type IIA-like domain Rfer_1571 topoisomerase IPR013760 - DNA topoisomerase, type IIA-like domain Rfer_1571 arginine IPR024946 - Arginine repressor C-terminal-like domain Rfer_1571 repressor IPR024946 - Arginine repressor C-terminal-like domain Rfer_1571 c-terminal-like IPR024946 - Arginine repressor C-terminal-like domain Rfer_1575 fold IPR012336 - Thioredoxin-like fold Rfer_1575 isomerase IPR018950 - Disulphide bond isomerase, DsbC/G, N-terminal Rfer_1577 peptidase IPR000209 - Peptidase S8/S53 domain Rfer_1578 binding IPR006073 - GTP binding domain Rfer_1578 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1578 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1578 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1578 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1580 synthase IPR001269 - tRNA-dihydrouridine synthase Rfer_1580 barrel IPR013785 - Aldolase-type TIM barrel Rfer_1582 synthase-like IPR011607 - Methylglyoxal synthase-like domain Rfer_1583 cytochrome IPR009056 - Cytochrome c-like domain Rfer_1583 c-like IPR009056 - Cytochrome c-like domain Rfer_1588 cytochrome IPR009056 - Cytochrome c-like domain Rfer_1588 c-like IPR009056 - Cytochrome c-like domain Rfer_1589 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1589 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1589 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1589 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1590 acyl-coa IPR016181 - Acyl-CoA N-acyltransferase Rfer_1594 abc IPR000515 - MetI-like domain Rfer_1594 transmembrane IPR000515 - MetI-like domain Rfer_1594 transporter IPR000515 - MetI-like domain Rfer_1595 abc IPR003439 - ABC transporter-like Rfer_1595 binding IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_1595 c-terminal IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_1595 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1595 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1595 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1595 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1598 fold IPR012336 - Thioredoxin-like fold Rfer_1603 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1603 factor IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_1603 polymerase IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_1603 sigma IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_1603 rna IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_1603 rna IPR014284 - RNA polymerase sigma-70 like domain Rfer_1603 polymerase IPR014284 - RNA polymerase sigma-70 like domain Rfer_1607 uncharacterised IPR007801 - Uncharacterised protein family UPF0276 Rfer_1610 methyltransferase IPR017804 - Methyltransferase EgtD-like Rfer_1610 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_1611 barrel IPR013785 - Aldolase-type TIM barrel Rfer_1612 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_1613 synthetase IPR004536 - Selenide water dikinase Rfer_1613 c-terminal IPR010918 - AIR synthase-related protein, C-terminal domain Rfer_1615 abc IPR005770 - Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein Rfer_1615 binding IPR005770 - Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein Rfer_1615 phosphate IPR005770 - Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein Rfer_1615 periplasmic IPR005770 - Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein Rfer_1615 transporter IPR005770 - Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein Rfer_1616 abc IPR003439 - ABC transporter-like Rfer_1616 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1616 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1616 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1616 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1617 abc IPR000515 - MetI-like domain Rfer_1617 transmembrane IPR000515 - MetI-like domain Rfer_1617 transporter IPR000515 - MetI-like domain Rfer_1618 abc IPR000515 - MetI-like domain Rfer_1618 transmembrane IPR000515 - MetI-like domain Rfer_1618 transporter IPR000515 - MetI-like domain Rfer_1619 fold IPR016187 - C-type lectin fold Rfer_1619 c-type IPR016187 - C-type lectin fold Rfer_1619 lectin IPR016187 - C-type lectin fold Rfer_1619 biosynthesis IPR017806 - Ergothioneine biosynthesis protein EgtB Rfer_1619 hydrolase IPR027369 - DinB/YfiT-like putative metal-dependent hydrolase Rfer_1619 putative IPR027369 - DinB/YfiT-like putative metal-dependent hydrolase Rfer_1620 dna-binding IPR009061 - DNA binding domain, putative Rfer_1620 putative IPR009061 - DNA binding domain, putative Rfer_1621 reductase IPR016156 - FAD/NAD-linked reductase, dimerisation domain Rfer_1627 kinase-like IPR011009 - Protein kinase-like domain Rfer_1628 phosphatase IPR015655 - Protein phosphatase 2C Rfer_1629 fold IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_1629 ribosomal IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_1630 triphosphate IPR029001 - Inosine triphosphate pyrophosphatase-like Rfer_1631 radical IPR007197 - Radical SAM Rfer_1632 barrel IPR013785 - Aldolase-type TIM barrel Rfer_1633 unknown IPR015001 - Protein of unknown function DUF1850 Rfer_1636 barrel IPR013785 - Aldolase-type TIM barrel Rfer_1638 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_1638 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_1639 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1641 c-terminal IPR008920 - Transcription regulator FadR/GntR, C-terminal Rfer_1641 transcription IPR008920 - Transcription regulator FadR/GntR, C-terminal Rfer_1641 regulator IPR008920 - Transcription regulator FadR/GntR, C-terminal Rfer_1641 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1643 dehydrogenase IPR002085 - Alcohol dehydrogenase superfamily, zinc-type Rfer_1645 dehydrogenase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_1645 acyl-coa IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_1645 oxidase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_1645 c-terminal IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_1645 dehydrogenase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_1645 oxidase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_1645 acyl-coa IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_1646 dehydrogenase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_1646 acyl-coa IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_1646 oxidase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_1646 c-terminal IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_1646 dehydrogenase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_1646 oxidase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_1646 acyl-coa IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_1647 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1647 fold IPR014710 - RmlC-like jelly roll fold Rfer_1648 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1650 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1650 domain-like IPR029016 - GAF domain-like Rfer_1651 kinase IPR002504 - Inorganic polyphosphate/ATP-NAD kinase Rfer_1652 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1652 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1652 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1652 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1653 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1653 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1653 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1653 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1654 glycosylase IPR011257 - DNA glycosylase Rfer_1654 dna IPR011257 - DNA glycosylase Rfer_1654 hydrolase IPR015797 - NUDIX hydrolase domain-like Rfer_1654 domain-like IPR015797 - NUDIX hydrolase domain-like Rfer_1655 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1655 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1655 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1655 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1656 ribosomal IPR010979 - Ribosomal protein S13-like, H2TH Rfer_1657 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_1659 fold IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_1659 ribosomal IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_1661 ribosomal IPR011035 - Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain Rfer_1661 synthetase IPR011035 - Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain Rfer_1661 ribosomal IPR029751 - Ribosomal protein L25 Rfer_1665 atpase IPR001757 - Cation-transporting P-type ATPase Rfer_1666 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1666 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1666 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1666 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1667 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1667 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1667 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1667 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1668 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_1669 virulence IPR017039 - Virulence factor BrkB Rfer_1669 factor IPR017039 - Virulence factor BrkB Rfer_1672 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1672 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1672 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1672 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1673 cyclase IPR029787 - Nucleotide cyclase Rfer_1673 nucleotide IPR029787 - Nucleotide cyclase Rfer_1674 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_1674 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_1674 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_1674 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_1675 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1675 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1675 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1675 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1677 alpha IPR029028 - Alpha/beta knot methyltransferases Rfer_1677 beta IPR029028 - Alpha/beta knot methyltransferases Rfer_1679 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_1680 cytochrome IPR009056 - Cytochrome c-like domain Rfer_1680 c-like IPR009056 - Cytochrome c-like domain Rfer_1681 cytochrome IPR000883 - Cytochrome c oxidase subunit I Rfer_1681 oxidase IPR000883 - Cytochrome c oxidase subunit I Rfer_1681 cytochrome IPR023616 - Cytochrome c oxidase, subunit I domain Rfer_1684 cytochrome IPR000298 - Cytochrome c oxidase subunit III domain Rfer_1684 oxidase IPR024791 - Cytochrome c oxidase subunit III Rfer_1684 cytochrome IPR024791 - Cytochrome c oxidase subunit III Rfer_1687 fold IPR012336 - Thioredoxin-like fold Rfer_1689 prenyltransferase IPR000537 - UbiA prenyltransferase family Rfer_1690 chaperone IPR003782 - Copper chaperone SCO1/SenC Rfer_1690 copper IPR003782 - Copper chaperone SCO1/SenC Rfer_1690 fold IPR012336 - Thioredoxin-like fold Rfer_1692 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1692 factor IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_1692 polymerase IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_1692 sigma IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_1692 rna IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_1692 rna IPR014284 - RNA polymerase sigma-70 like domain Rfer_1692 polymerase IPR014284 - RNA polymerase sigma-70 like domain Rfer_1694 major IPR020846 - Major facilitator superfamily domain Rfer_1694 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_1697 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1698 major IPR011701 - Major facilitator superfamily Rfer_1698 major IPR020846 - Major facilitator superfamily domain Rfer_1699 synthetase IPR003694 - NAD(+) synthetase Rfer_1699 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1699 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1699 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1699 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1700 nitrogen IPR011322 - Nitrogen regulatory PII-like, alpha/beta Rfer_1700 beta IPR011322 - Nitrogen regulatory PII-like, alpha/beta Rfer_1700 regulatory IPR011322 - Nitrogen regulatory PII-like, alpha/beta Rfer_1700 alpha IPR011322 - Nitrogen regulatory PII-like, alpha/beta Rfer_1703 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1703 fold IPR014710 - RmlC-like jelly roll fold Rfer_1704 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1706 fold IPR014710 - RmlC-like jelly roll fold Rfer_1707 fold IPR014710 - RmlC-like jelly roll fold Rfer_1710 lyase IPR000362 - Fumarate lyase family Rfer_1711 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1711 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1711 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1711 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1713 cytochrome IPR011031 - Multihaem cytochrome Rfer_1714 kinase-like IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_1714 pyruvate IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_1719 cyclase IPR029787 - Nucleotide cyclase Rfer_1719 nucleotide IPR029787 - Nucleotide cyclase Rfer_1720 rna-binding IPR019307 - RNA-binding protein AU-1/Ribonuclease E/G Rfer_1720 ribonuclease IPR019307 - RNA-binding protein AU-1/Ribonuclease E/G Rfer_1721 pseudouridine IPR020103 - Pseudouridine synthase, catalytic domain Rfer_1721 synthase IPR020103 - Pseudouridine synthase, catalytic domain Rfer_1721 catalytic IPR020103 - Pseudouridine synthase, catalytic domain Rfer_1722 subfamily IPR006439 - HAD hydrolase, subfamily IA Rfer_1722 hydrolase IPR006439 - HAD hydrolase, subfamily IA Rfer_1722 phosphatase IPR023198 - Phosphoglycolate phosphatase, domain 2 Rfer_1724 peptidase IPR002142 - Peptidase S49 Rfer_1726 triphosphate IPR029001 - Inosine triphosphate pyrophosphatase-like Rfer_1728 ribosomal IPR011332 - Zinc-binding ribosomal protein Rfer_1729 acid IPR003664 - Fatty acid synthesis PlsX protein Rfer_1729 synthesis IPR003664 - Fatty acid synthesis PlsX protein Rfer_1731 acyl IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_1731 acyl IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_1731 hydrolase IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_1731 transferase IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_1731 carrier IPR024925 - Malonyl CoA-acyl carrier protein transacylase Rfer_1732 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_1732 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_1733 binding IPR009081 - Acyl carrier protein-like Rfer_1736 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1736 factor IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_1736 polymerase IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_1736 sigma IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_1736 rna IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_1736 rna IPR014284 - RNA polymerase sigma-70 like domain Rfer_1736 polymerase IPR014284 - RNA polymerase sigma-70 like domain Rfer_1739 peptidase IPR001940 - Peptidase S1C Rfer_1739 peptidase IPR009003 - Trypsin-like cysteine/serine peptidase domain Rfer_1740 factor IPR006297 - Elongation factor 4 Rfer_1740 elongation IPR006297 - Elongation factor 4 Rfer_1740 translation IPR009000 - Translation protein, beta-barrel domain Rfer_1740 beta-barrel IPR009000 - Translation protein, beta-barrel domain Rfer_1740 elongation IPR009022 - Elongation factor G, III-V domain Rfer_1740 factor IPR009022 - Elongation factor G, III-V domain Rfer_1740 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1740 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1740 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1740 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1741 peptidase IPR000223 - Peptidase S26A, signal peptidase I Rfer_1741 peptidase IPR000223 - Peptidase S26A, signal peptidase I Rfer_1741 signal IPR000223 - Peptidase S26A, signal peptidase I Rfer_1743 rna-binding IPR014720 - Double-stranded RNA-binding domain Rfer_1744 binding IPR006073 - GTP binding domain Rfer_1744 domain-like IPR015946 - K homology domain-like, alpha/beta Rfer_1744 homology IPR015946 - K homology domain-like, alpha/beta Rfer_1744 beta IPR015946 - K homology domain-like, alpha/beta Rfer_1744 alpha IPR015946 - K homology domain-like, alpha/beta Rfer_1744 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1744 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1744 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1744 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1745 phosphatase IPR000326 - Phosphatidic acid phosphatase type 2/haloperoxidase Rfer_1745 acid IPR000326 - Phosphatidic acid phosphatase type 2/haloperoxidase Rfer_1749 antitoxin IPR007337 - RelB antitoxin/Antitoxin DinJ Rfer_1749 antitoxin IPR007337 - RelB antitoxin/Antitoxin DinJ Rfer_1750 toxin IPR007712 - Toxin-antitoxin system, RelE/ParE toxin family Rfer_1752 barrel IPR013785 - Aldolase-type TIM barrel Rfer_1753 carrier IPR002582 - Holo-[acyl carrier protein] synthase Rfer_1753 synthase IPR002582 - Holo-[acyl carrier protein] synthase Rfer_1753 transferase IPR008278 - 4'-phosphopantetheinyl transferase superfamily Rfer_1754 hydrolase IPR017853 - Glycoside hydrolase, superfamily Rfer_1754 glycoside IPR017853 - Glycoside hydrolase, superfamily Rfer_1756 major IPR011701 - Major facilitator superfamily Rfer_1756 major IPR020846 - Major facilitator superfamily domain Rfer_1757 archaeal IPR005872 - Archaeal/bacterial translation initiation factor SUI1 Rfer_1757 bacterial IPR005872 - Archaeal/bacterial translation initiation factor SUI1 Rfer_1757 initiation IPR005872 - Archaeal/bacterial translation initiation factor SUI1 Rfer_1757 factor IPR005872 - Archaeal/bacterial translation initiation factor SUI1 Rfer_1757 translation IPR005872 - Archaeal/bacterial translation initiation factor SUI1 Rfer_1759 abc IPR003439 - ABC transporter-like Rfer_1759 binding IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_1759 c-terminal IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_1759 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1759 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1759 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1759 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1760 abc IPR000515 - MetI-like domain Rfer_1760 transmembrane IPR000515 - MetI-like domain Rfer_1760 transporter IPR000515 - MetI-like domain Rfer_1760 abc IPR005667 - Sulphate ABC transporter permease protein 2 Rfer_1760 permease IPR005667 - Sulphate ABC transporter permease protein 2 Rfer_1760 transporter IPR005667 - Sulphate ABC transporter permease protein 2 Rfer_1761 abc IPR000515 - MetI-like domain Rfer_1761 transmembrane IPR000515 - MetI-like domain Rfer_1761 transporter IPR000515 - MetI-like domain Rfer_1761 abc IPR005667 - Sulphate ABC transporter permease protein 2 Rfer_1761 permease IPR005667 - Sulphate ABC transporter permease protein 2 Rfer_1761 transporter IPR005667 - Sulphate ABC transporter permease protein 2 Rfer_1763 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_1763 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_1763 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_1763 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_1766 transcriptional IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_1766 c-terminal IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_1766 regulator IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_1767 cyclase IPR029787 - Nucleotide cyclase Rfer_1767 nucleotide IPR029787 - Nucleotide cyclase Rfer_1768 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1768 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1768 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1768 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1768 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_1768 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_1768 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_1771 abc IPR000515 - MetI-like domain Rfer_1771 transmembrane IPR000515 - MetI-like domain Rfer_1771 transporter IPR000515 - MetI-like domain Rfer_1772 abc IPR003439 - ABC transporter-like Rfer_1772 import IPR026253 - Methionine import ATP-binding protein MetN Rfer_1772 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1772 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1772 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1772 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1774 binding IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_1774 c-terminal IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_1775 abc IPR003439 - ABC transporter-like Rfer_1775 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1775 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1775 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1775 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1776 abc IPR000515 - MetI-like domain Rfer_1776 transmembrane IPR000515 - MetI-like domain Rfer_1776 transporter IPR000515 - MetI-like domain Rfer_1782 kinase-like IPR011009 - Protein kinase-like domain Rfer_1782 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1782 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1782 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1782 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1784 aminoacyl-trna IPR006195 - Aminoacyl-tRNA synthetase, class II Rfer_1784 synthetase IPR006195 - Aminoacyl-tRNA synthetase, class II Rfer_1784 synthetase IPR018150 - Aminoacyl-tRNA synthetase, class II (D/K/N)-like Rfer_1784 aminoacyl-trna IPR018150 - Aminoacyl-tRNA synthetase, class II (D/K/N)-like Rfer_1787 barrel IPR013785 - Aldolase-type TIM barrel Rfer_1788 beta IPR023026 - Tryptophan synthase beta chain/beta chain-like Rfer_1788 tryptophan IPR023026 - Tryptophan synthase beta chain/beta chain-like Rfer_1788 synthase IPR023026 - Tryptophan synthase beta chain/beta chain-like Rfer_1788 beta IPR023026 - Tryptophan synthase beta chain/beta chain-like Rfer_1788 chain IPR023026 - Tryptophan synthase beta chain/beta chain-like Rfer_1789 barrel IPR013785 - Aldolase-type TIM barrel Rfer_1790 pseudouridine IPR020097 - Pseudouridine synthase I, TruA, alpha/beta domain Rfer_1790 beta IPR020097 - Pseudouridine synthase I, TruA, alpha/beta domain Rfer_1790 alpha IPR020097 - Pseudouridine synthase I, TruA, alpha/beta domain Rfer_1790 synthase IPR020097 - Pseudouridine synthase I, TruA, alpha/beta domain Rfer_1790 pseudouridine IPR020103 - Pseudouridine synthase, catalytic domain Rfer_1790 synthase IPR020103 - Pseudouridine synthase, catalytic domain Rfer_1790 catalytic IPR020103 - Pseudouridine synthase, catalytic domain Rfer_1792 dehydrogenase IPR012080 - Aspartate-semialdehyde dehydrogenase Rfer_1794 dehydratase IPR015928 - Aconitase/3-isopropylmalate dehydratase, swivel Rfer_1794 aconitase IPR015928 - Aconitase/3-isopropylmalate dehydratase, swivel Rfer_1794 aconitase IPR015937 - Aconitase/isopropylmalate dehydratase Rfer_1794 dehydratase IPR015937 - Aconitase/isopropylmalate dehydratase Rfer_1795 large IPR001030 - Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha Rfer_1795 aconitase IPR001030 - Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha Rfer_1795 alpha IPR001030 - Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha Rfer_1795 dehydratase IPR001030 - Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha Rfer_1795 beta IPR001030 - Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha Rfer_1795 alpha IPR001030 - Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha Rfer_1795 aconitase IPR015937 - Aconitase/isopropylmalate dehydratase Rfer_1795 dehydratase IPR015937 - Aconitase/isopropylmalate dehydratase Rfer_1796 synthase IPR002020 - Citrate synthase-like Rfer_1797 dehydrogenase IPR005631 - Flavinator of succinate dehydrogenase Rfer_1800 dehydrogenase IPR000701 - Succinate dehydrogenase/Fumarate reductase, transmembrane subunit Rfer_1800 transmembrane IPR000701 - Succinate dehydrogenase/Fumarate reductase, transmembrane subunit Rfer_1800 reductase IPR000701 - Succinate dehydrogenase/Fumarate reductase, transmembrane subunit Rfer_1801 dehydrogenase IPR000701 - Succinate dehydrogenase/Fumarate reductase, transmembrane subunit Rfer_1801 transmembrane IPR000701 - Succinate dehydrogenase/Fumarate reductase, transmembrane subunit Rfer_1801 reductase IPR000701 - Succinate dehydrogenase/Fumarate reductase, transmembrane subunit Rfer_1802 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1802 transcription IPR028978 - Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain Rfer_1803 dehydrogenase IPR001557 - L-lactate/malate dehydrogenase Rfer_1803 hydrolase IPR015955 - Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal Rfer_1803 c-terminal IPR015955 - Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal Rfer_1803 glycoside IPR015955 - Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal Rfer_1803 dehydrogenase IPR015955 - Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal Rfer_1804 beta IPR011206 - Citrate lyase beta subunit-like Rfer_1804 lyase IPR011206 - Citrate lyase beta subunit-like Rfer_1804 kinase-like IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_1804 pyruvate IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_1806 large IPR001030 - Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha Rfer_1806 aconitase IPR001030 - Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha Rfer_1806 alpha IPR001030 - Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha Rfer_1806 dehydratase IPR001030 - Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha Rfer_1806 beta IPR001030 - Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha Rfer_1806 alpha IPR001030 - Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha Rfer_1806 dehydratase IPR015928 - Aconitase/3-isopropylmalate dehydratase, swivel Rfer_1806 aconitase IPR015928 - Aconitase/3-isopropylmalate dehydratase, swivel Rfer_1806 aconitase IPR015937 - Aconitase/isopropylmalate dehydratase Rfer_1806 dehydratase IPR015937 - Aconitase/isopropylmalate dehydratase Rfer_1812 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_1813 barrel IPR013785 - Aldolase-type TIM barrel Rfer_1819 endonuclease IPR011335 - Restriction endonuclease type II-like Rfer_1819 trna IPR011856 - tRNA endonuclease-like domain Rfer_1821 dna-binding IPR010982 - Lambda repressor-like, DNA-binding domain Rfer_1822 dna IPR012327 - D12 class N6 adenine-specific DNA methyltransferase Rfer_1822 methyltransferase IPR012327 - D12 class N6 adenine-specific DNA methyltransferase Rfer_1822 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_1823 synthetase IPR000924 - Glutamyl/glutaminyl-tRNA synthetase Rfer_1823 ribosomal IPR011035 - Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain Rfer_1823 synthetase IPR011035 - Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain Rfer_1823 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1823 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1823 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1823 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1823 catalytic IPR020058 - Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain Rfer_1823 synthetase IPR020058 - Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain Rfer_1825 domain-like IPR029016 - GAF domain-like Rfer_1825 cyclase IPR029787 - Nucleotide cyclase Rfer_1825 nucleotide IPR029787 - Nucleotide cyclase Rfer_1827 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1827 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1827 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1827 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1827 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_1827 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_1827 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_1830 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_1830 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_1830 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_1830 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_1832 dna IPR007695 - DNA mismatch repair protein MutS-like, N-terminal Rfer_1832 repair IPR007695 - DNA mismatch repair protein MutS-like, N-terminal Rfer_1832 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1832 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1832 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1832 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1835 abc IPR003439 - ABC transporter-like Rfer_1835 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1835 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1835 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1835 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1836 transporter IPR001851 - ABC transporter, permease Rfer_1836 abc IPR001851 - ABC transporter, permease Rfer_1836 permease IPR001851 - ABC transporter, permease Rfer_1836 abc IPR003439 - ABC transporter-like Rfer_1836 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1836 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1836 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1836 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1837 transporter IPR001851 - ABC transporter, permease Rfer_1837 abc IPR001851 - ABC transporter, permease Rfer_1837 permease IPR001851 - ABC transporter, permease Rfer_1838 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_1838 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_1838 binding IPR028082 - Periplasmic binding protein-like I Rfer_1839 c-terminal IPR008920 - Transcription regulator FadR/GntR, C-terminal Rfer_1839 transcription IPR008920 - Transcription regulator FadR/GntR, C-terminal Rfer_1839 regulator IPR008920 - Transcription regulator FadR/GntR, C-terminal Rfer_1839 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1840 transporter IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_1840 receptor IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_1840 solute IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_1843 coenzyme IPR004165 - Coenzyme A transferase family I Rfer_1843 transferase IPR004165 - Coenzyme A transferase family I Rfer_1844 acyl IPR023439 - Malonate decarboxylase/citrate lyase acyl carrier protein Rfer_1844 decarboxylase IPR023439 - Malonate decarboxylase/citrate lyase acyl carrier protein Rfer_1844 lyase IPR023439 - Malonate decarboxylase/citrate lyase acyl carrier protein Rfer_1844 carrier IPR023439 - Malonate decarboxylase/citrate lyase acyl carrier protein Rfer_1849 acyl IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_1849 acyl IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_1849 hydrolase IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_1849 transferase IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_1852 acyl IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_1852 acyl IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_1852 hydrolase IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_1852 transferase IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_1853 hydrolase IPR017853 - Glycoside hydrolase, superfamily Rfer_1853 glycoside IPR017853 - Glycoside hydrolase, superfamily Rfer_1855 abc IPR000515 - MetI-like domain Rfer_1855 transmembrane IPR000515 - MetI-like domain Rfer_1855 transporter IPR000515 - MetI-like domain Rfer_1856 abc IPR003439 - ABC transporter-like Rfer_1856 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1856 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1856 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1856 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1857 abc IPR000515 - MetI-like domain Rfer_1857 transmembrane IPR000515 - MetI-like domain Rfer_1857 transporter IPR000515 - MetI-like domain Rfer_1860 assembly IPR000825 - SUF system FeS cluster assembly, SufBD Rfer_1861 abc IPR003439 - ABC transporter-like Rfer_1861 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1861 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1861 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1861 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1862 assembly IPR000825 - SUF system FeS cluster assembly, SufBD Rfer_1863 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_1866 transcription IPR000944 - Transcription regulator Rrf2-like Rfer_1866 regulator IPR000944 - Transcription regulator Rrf2-like Rfer_1866 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1869 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1870 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1870 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1870 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1870 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1870 domain-like IPR029016 - GAF domain-like Rfer_1873 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1874 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1874 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1874 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1874 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1882 beta-barrel IPR011250 - Outer membrane protein/outer membrane enzyme PagP , beta-barrel Rfer_1882 enzyme IPR011250 - Outer membrane protein/outer membrane enzyme PagP , beta-barrel Rfer_1882 outer IPR011250 - Outer membrane protein/outer membrane enzyme PagP , beta-barrel Rfer_1882 outer IPR011250 - Outer membrane protein/outer membrane enzyme PagP , beta-barrel Rfer_1882 membrane IPR011250 - Outer membrane protein/outer membrane enzyme PagP , beta-barrel Rfer_1882 membrane IPR011250 - Outer membrane protein/outer membrane enzyme PagP , beta-barrel Rfer_1883 transcription IPR000944 - Transcription regulator Rrf2-like Rfer_1883 regulator IPR000944 - Transcription regulator Rrf2-like Rfer_1883 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1886 cytochrome IPR000883 - Cytochrome c oxidase subunit I Rfer_1886 oxidase IPR000883 - Cytochrome c oxidase subunit I Rfer_1886 cytochrome IPR023616 - Cytochrome c oxidase, subunit I domain Rfer_1887 cyclase IPR029787 - Nucleotide cyclase Rfer_1887 nucleotide IPR029787 - Nucleotide cyclase Rfer_1891 barrel IPR013785 - Aldolase-type TIM barrel Rfer_1892 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1894 major IPR011701 - Major facilitator superfamily Rfer_1894 major IPR020846 - Major facilitator superfamily domain Rfer_1895 pseudouridine IPR020103 - Pseudouridine synthase, catalytic domain Rfer_1895 synthase IPR020103 - Pseudouridine synthase, catalytic domain Rfer_1895 catalytic IPR020103 - Pseudouridine synthase, catalytic domain Rfer_1896 methyltransferase IPR003358 - tRNA (guanine-N-7) methyltransferase Rfer_1896 trna IPR003358 - tRNA (guanine-N-7) methyltransferase Rfer_1896 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_1897 symporter IPR001734 - Sodium/solute symporter Rfer_1897 sodium IPR001734 - Sodium/solute symporter Rfer_1897 solute IPR001734 - Sodium/solute symporter Rfer_1897 cyclase IPR029787 - Nucleotide cyclase Rfer_1897 nucleotide IPR029787 - Nucleotide cyclase Rfer_1899 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1901 abc IPR003439 - ABC transporter-like Rfer_1901 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1901 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1901 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1901 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1902 transporter IPR001851 - ABC transporter, permease Rfer_1902 abc IPR001851 - ABC transporter, permease Rfer_1902 permease IPR001851 - ABC transporter, permease Rfer_1903 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_1903 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_1903 binding IPR028082 - Periplasmic binding protein-like I Rfer_1905 synthetase IPR000924 - Glutamyl/glutaminyl-tRNA synthetase Rfer_1905 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1905 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1905 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1905 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1905 catalytic IPR020058 - Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain Rfer_1905 synthetase IPR020058 - Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain Rfer_1907 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1908 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1908 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1908 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1908 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1908 domain-like IPR029060 - PIN domain-like Rfer_1909 fold IPR012336 - Thioredoxin-like fold Rfer_1911 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_1913 synthase-like IPR004450 - Threonine synthase-like Rfer_1914 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1914 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1914 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1914 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1916 factor IPR003749 - ThiamineS/Molybdopterin converting factor subunit 1 Rfer_1916 molybdopterin IPR003749 - ThiamineS/Molybdopterin converting factor subunit 1 Rfer_1917 biosynthesis IPR003448 - Molybdopterin biosynthesis MoaE Rfer_1917 molybdopterin IPR003448 - Molybdopterin biosynthesis MoaE Rfer_1919 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1919 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1919 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1919 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1921 6-phosphogluconate IPR000581 - Dihydroxy-acid/6-phosphogluconate dehydratase Rfer_1921 dehydratase IPR000581 - Dihydroxy-acid/6-phosphogluconate dehydratase Rfer_1921 dehydratase IPR015928 - Aconitase/3-isopropylmalate dehydratase, swivel Rfer_1921 aconitase IPR015928 - Aconitase/3-isopropylmalate dehydratase, swivel Rfer_1922 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1925 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_1925 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_1926 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1926 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1926 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1926 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1927 atpase IPR001757 - Cation-transporting P-type ATPase Rfer_1927 heavy IPR006121 - Heavy metal-associated domain, HMA Rfer_1928 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1930 cytochrome IPR000883 - Cytochrome c oxidase subunit I Rfer_1930 oxidase IPR000883 - Cytochrome c oxidase subunit I Rfer_1930 cytochrome IPR023616 - Cytochrome c oxidase, subunit I domain Rfer_1931 cytochrome IPR000883 - Cytochrome c oxidase subunit I Rfer_1931 oxidase IPR000883 - Cytochrome c oxidase subunit I Rfer_1931 cytochrome IPR009056 - Cytochrome c-like domain Rfer_1931 c-like IPR009056 - Cytochrome c-like domain Rfer_1932 component IPR008621 - Cbb3-type cytochrome oxidase component Rfer_1932 oxidase IPR008621 - Cbb3-type cytochrome oxidase component Rfer_1932 cytochrome IPR008621 - Cbb3-type cytochrome oxidase component Rfer_1933 cytochrome IPR008168 - Cytochrome c, class IC Rfer_1933 cytochrome IPR009056 - Cytochrome c-like domain Rfer_1933 c-like IPR009056 - Cytochrome c-like domain Rfer_1934 fold IPR013783 - Immunoglobulin-like fold Rfer_1935 nitrogen IPR008620 - FixH Rfer_1937 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1937 fold IPR014710 - RmlC-like jelly roll fold Rfer_1938 radical IPR007197 - Radical SAM Rfer_1942 abc IPR003439 - ABC transporter-like Rfer_1942 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1942 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1942 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1942 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1943 synthase IPR001269 - tRNA-dihydrouridine synthase Rfer_1943 barrel IPR013785 - Aldolase-type TIM barrel Rfer_1946 major IPR011701 - Major facilitator superfamily Rfer_1946 major IPR020846 - Major facilitator superfamily domain Rfer_1947 nitrogen IPR011322 - Nitrogen regulatory PII-like, alpha/beta Rfer_1947 beta IPR011322 - Nitrogen regulatory PII-like, alpha/beta Rfer_1947 regulatory IPR011322 - Nitrogen regulatory PII-like, alpha/beta Rfer_1947 alpha IPR011322 - Nitrogen regulatory PII-like, alpha/beta Rfer_1948 shock IPR013126 - Heat shock protein 70 family Rfer_1948 heat IPR013126 - Heat shock protein 70 family Rfer_1949 binding IPR030678 - Rfer_1949|Rfer_1949|REF_jgi:Rfer_1949|GeneID:3964131 Rfer_1949 peptide IPR030678 - Rfer_1949|Rfer_1949|REF_jgi:Rfer_1949|GeneID:3964131 Rfer_1950 abc IPR003439 - ABC transporter-like Rfer_1950 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1950 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1950 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1950 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1951 abc IPR003439 - ABC transporter-like Rfer_1951 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1951 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1951 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1951 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_1952 abc IPR000515 - MetI-like domain Rfer_1952 transmembrane IPR000515 - MetI-like domain Rfer_1952 transporter IPR000515 - MetI-like domain Rfer_1953 abc IPR000515 - MetI-like domain Rfer_1953 transmembrane IPR000515 - MetI-like domain Rfer_1953 transporter IPR000515 - MetI-like domain Rfer_1955 regulator IPR010203 - Regulator of ribonuclease activity A Rfer_1955 ribonuclease IPR010203 - Regulator of ribonuclease activity A Rfer_1957 transfer IPR012255 - Electron transfer flavoprotein, beta subunit Rfer_1957 electron IPR012255 - Electron transfer flavoprotein, beta subunit Rfer_1957 flavoprotein IPR012255 - Electron transfer flavoprotein, beta subunit Rfer_1957 beta IPR012255 - Electron transfer flavoprotein, beta subunit Rfer_1957 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1957 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1957 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1957 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1958 transfer IPR001308 - Electron transfer flavoprotein, alpha subunit Rfer_1958 electron IPR001308 - Electron transfer flavoprotein, alpha subunit Rfer_1958 alpha IPR001308 - Electron transfer flavoprotein, alpha subunit Rfer_1958 flavoprotein IPR001308 - Electron transfer flavoprotein, alpha subunit Rfer_1958 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1958 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1958 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1958 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_1959 dehydrogenase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_1959 acyl-coa IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_1959 oxidase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_1959 c-terminal IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_1959 dehydrogenase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_1959 oxidase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_1959 acyl-coa IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_1960 barrel IPR013785 - Aldolase-type TIM barrel Rfer_1969 shock IPR013126 - Heat shock protein 70 family Rfer_1969 heat IPR013126 - Heat shock protein 70 family Rfer_1971 isomerase IPR023566 - Peptidyl-prolyl cis-trans isomerase, FKBP-type Rfer_1972 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_1975 radical IPR007197 - Radical SAM Rfer_1975 radical IPR023970 - Methylthiotransferase/radical SAM-type protein Rfer_1976 ribonuclease IPR004476 - Ribonuclease II/ribonuclease R Rfer_1976 ribonuclease IPR004476 - Ribonuclease II/ribonuclease R Rfer_1976 shock IPR011129 - Cold shock protein Rfer_1977 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_1977 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_1978 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1978 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1978 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1978 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_1978 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_1978 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_1978 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_1982 domain-like IPR029016 - GAF domain-like Rfer_1982 cyclase IPR029787 - Nucleotide cyclase Rfer_1982 nucleotide IPR029787 - Nucleotide cyclase Rfer_1983 domain-like IPR029016 - GAF domain-like Rfer_1983 cyclase IPR029787 - Nucleotide cyclase Rfer_1983 nucleotide IPR029787 - Nucleotide cyclase Rfer_1984 atp-dependent IPR000631 - YjeF C-terminal domain Rfer_1984 dehydratase IPR000631 - YjeF C-terminal domain Rfer_1988 amidase IPR000120 - Amidase Rfer_1988 amidase IPR023631 - Amidase signature domain Rfer_1989 ribosomal IPR001865 - Ribosomal protein S2 Rfer_1991 kinase IPR001048 - Aspartate/glutamate/uridylate kinase Rfer_1991 glutamate IPR001048 - Aspartate/glutamate/uridylate kinase Rfer_1991 kinase IPR011817 - Uridylate kinase Rfer_2002 ribonuclease IPR001352 - Ribonuclease HII/HIII Rfer_2002 ribonuclease IPR012337 - Ribonuclease H-like domain Rfer_2003 alpha IPR029028 - Alpha/beta knot methyltransferases Rfer_2003 beta IPR029028 - Alpha/beta knot methyltransferases Rfer_2003 ribosomal IPR029064 - 50S ribosomal protein L30e-like Rfer_2006 synthase-like IPR011607 - Methylglyoxal synthase-like domain Rfer_2006 fold IPR011761 - ATP-grasp fold Rfer_2006 subdomain IPR013816 - ATP-grasp fold, subdomain 2 Rfer_2006 fold IPR013816 - ATP-grasp fold, subdomain 2 Rfer_2007 factor IPR023459 - Transcription elongation factor GreA/GreB family Rfer_2007 elongation IPR023459 - Transcription elongation factor GreA/GreB family Rfer_2007 transcription IPR023459 - Transcription elongation factor GreA/GreB family Rfer_2010 ribosomal IPR015507 - Ribosomal RNA large subunit methyltransferase E Rfer_2010 large IPR015507 - Ribosomal RNA large subunit methyltransferase E Rfer_2010 methyltransferase IPR015507 - Ribosomal RNA large subunit methyltransferase E Rfer_2010 rna IPR015507 - Ribosomal RNA large subunit methyltransferase E Rfer_2010 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_2011 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2011 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2011 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2011 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2012 synthase-like IPR011005 - Dihydropteroate synthase-like Rfer_2014 acyl-coa IPR016181 - Acyl-CoA N-acyltransferase Rfer_2016 cyclase IPR029787 - Nucleotide cyclase Rfer_2016 nucleotide IPR029787 - Nucleotide cyclase Rfer_2018 histidine IPR029033 - Histidine phosphatase superfamily Rfer_2018 phosphatase IPR029033 - Histidine phosphatase superfamily Rfer_2022 barrel IPR011008 - Dimeric alpha-beta barrel Rfer_2022 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_2023 transmembrane IPR016174 - Di-haem cytochrome, transmembrane Rfer_2023 cytochrome IPR016174 - Di-haem cytochrome, transmembrane Rfer_2025 peptidase IPR000834 - Peptidase M14, carboxypeptidase A Rfer_2026 acyl IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_2026 acyl IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_2026 hydrolase IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_2026 transferase IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_2028 acyl-coa IPR016181 - Acyl-CoA N-acyltransferase Rfer_2030 cyclase IPR029787 - Nucleotide cyclase Rfer_2030 nucleotide IPR029787 - Nucleotide cyclase Rfer_2031 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_2031 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_2031 binding IPR028082 - Periplasmic binding protein-like I Rfer_2032 phosphatase IPR003695 - Ppx/GppA phosphatase Rfer_2032 pyrophosphatase IPR030673 - Rfer_2032|Rfer_2032|REF_jgi:Rfer_2032|GeneID:3963170 Rfer_2033 helicase IPR014001 - Helicase, superfamily 1/2, ATP-binding domain Rfer_2033 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2033 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2033 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2033 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2038 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2038 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2038 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2038 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2038 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2038 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2038 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2039 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_2040 polymerase IPR004805 - DNA polymerase III, alpha subunit Rfer_2040 alpha IPR004805 - DNA polymerase III, alpha subunit Rfer_2040 dna IPR004805 - DNA polymerase III, alpha subunit Rfer_2040 phosphatase-like IPR016195 - Polymerase/histidinol phosphatase-like Rfer_2040 polymerase IPR016195 - Polymerase/histidinol phosphatase-like Rfer_2041 abc IPR003439 - ABC transporter-like Rfer_2041 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2041 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2041 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2041 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2042 acyl-coa IPR016181 - Acyl-CoA N-acyltransferase Rfer_2043 modification IPR004556 - Modification methylase HemK Rfer_2043 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_2044 peptidase IPR002933 - Peptidase M20 Rfer_2045 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2045 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2045 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2045 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2047 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_2051 binding IPR006127 - Periplasmic solute binding protein family Rfer_2051 periplasmic IPR006127 - Periplasmic solute binding protein family Rfer_2051 solute IPR006127 - Periplasmic solute binding protein family Rfer_2053 abc IPR003439 - ABC transporter-like Rfer_2053 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2053 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2053 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2053 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2055 periplasmic IPR029151 - Periplasmic sensor domain-like Rfer_2055 domain-like IPR029151 - Periplasmic sensor domain-like Rfer_2055 cyclase IPR029787 - Nucleotide cyclase Rfer_2055 nucleotide IPR029787 - Nucleotide cyclase Rfer_2056 membrane IPR004776 - Auxin efflux carrier Rfer_2056 transport IPR004776 - Auxin efflux carrier Rfer_2058 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_2058 regulator IPR017685 - Transcription regulator ArgP Rfer_2058 transcriptional IPR017685 - Transcription regulator ArgP Rfer_2059 barrel IPR012349 - FMN-binding split barrel Rfer_2060 6-phosphogluconate IPR000581 - Dihydroxy-acid/6-phosphogluconate dehydratase Rfer_2060 dehydratase IPR000581 - Dihydroxy-acid/6-phosphogluconate dehydratase Rfer_2060 dehydratase IPR015928 - Aconitase/3-isopropylmalate dehydratase, swivel Rfer_2060 aconitase IPR015928 - Aconitase/3-isopropylmalate dehydratase, swivel Rfer_2061 barrel IPR013785 - Aldolase-type TIM barrel Rfer_2062 acyl IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_2062 acyl IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_2062 hydrolase IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_2062 transferase IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_2064 outer IPR003423 - Outer membrane efflux protein Rfer_2064 efflux IPR003423 - Outer membrane efflux protein Rfer_2064 membrane IPR003423 - Outer membrane efflux protein Rfer_2065 resistance IPR001036 - Acriflavin resistance protein Rfer_2066 membrane IPR006143 - RND efflux pump, membrane fusion protein Rfer_2066 pump IPR006143 - RND efflux pump, membrane fusion protein Rfer_2066 efflux IPR006143 - RND efflux pump, membrane fusion protein Rfer_2067 transcriptional IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_2067 c-terminal IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_2067 regulator IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_2069 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_2069 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_2070 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_2070 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_2070 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_2070 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_2072 ribonuclease IPR012337 - Ribonuclease H-like domain Rfer_2074 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2074 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2074 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2074 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2075 transcriptional IPR002876 - Transcriptional regulator TACO1-like Rfer_2075 regulator IPR002876 - Transcriptional regulator TACO1-like Rfer_2075 domain-like IPR017856 - Integrase, N-terminal zinc-binding domain-like Rfer_2076 fold IPR011761 - ATP-grasp fold Rfer_2076 subdomain IPR013816 - ATP-grasp fold, subdomain 2 Rfer_2076 fold IPR013816 - ATP-grasp fold, subdomain 2 Rfer_2078 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2078 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2078 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2078 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2080 methyltransferase IPR003742 - SPOUT methyltransferase, predicted Rfer_2080 predicted IPR003742 - SPOUT methyltransferase, predicted Rfer_2080 alpha IPR029028 - Alpha/beta knot methyltransferases Rfer_2080 beta IPR029028 - Alpha/beta knot methyltransferases Rfer_2081 triphosphate IPR029001 - Inosine triphosphate pyrophosphatase-like Rfer_2082 rna-binding IPR019307 - RNA-binding protein AU-1/Ribonuclease E/G Rfer_2082 ribonuclease IPR019307 - RNA-binding protein AU-1/Ribonuclease E/G Rfer_2084 hydrolase IPR011330 - Glycoside hydrolase/deacetylase, beta/alpha-barrel Rfer_2084 glycoside IPR011330 - Glycoside hydrolase/deacetylase, beta/alpha-barrel Rfer_2084 beta IPR011330 - Glycoside hydrolase/deacetylase, beta/alpha-barrel Rfer_2088 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_2090 abc IPR003439 - ABC transporter-like Rfer_2090 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2090 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2090 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2090 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2094 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_2096 lipoprotein IPR010653 - Lipoprotein, NlpB Rfer_2097 barrel IPR013785 - Aldolase-type TIM barrel Rfer_2098 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_2099 major IPR011701 - Major facilitator superfamily Rfer_2099 major IPR020846 - Major facilitator superfamily domain Rfer_2101 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_2105 kinase IPR001048 - Aspartate/glutamate/uridylate kinase Rfer_2105 glutamate IPR001048 - Aspartate/glutamate/uridylate kinase Rfer_2105 acyl-coa IPR016181 - Acyl-CoA N-acyltransferase Rfer_2106 helicase IPR014001 - Helicase, superfamily 1/2, ATP-binding domain Rfer_2106 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2106 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2106 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2106 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2107 symporter IPR000175 - Sodium:neurotransmitter symporter Rfer_2110 cytochrome IPR009056 - Cytochrome c-like domain Rfer_2110 c-like IPR009056 - Cytochrome c-like domain Rfer_2111 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_2112 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_2114 permease IPR005495 - Permease YjgP/YjgQ, predicted Rfer_2115 permease IPR005495 - Permease YjgP/YjgQ, predicted Rfer_2116 aminopeptidase IPR011356 - Leucine aminopeptidase/peptidase B Rfer_2116 peptidase IPR011356 - Leucine aminopeptidase/peptidase B Rfer_2116 peptidase IPR011356 - Leucine aminopeptidase/peptidase B Rfer_2119 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_2119 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_2119 binding IPR028082 - Periplasmic binding protein-like I Rfer_2120 ornithine IPR006130 - Aspartate/ornithine carbamoyltransferase Rfer_2121 aminotransferase IPR005814 - Aminotransferase class-III Rfer_2121 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_2126 decarboxylase IPR005308 - Orn/Lys/Arg decarboxylase, N-terminal Rfer_2126 ornithine IPR011193 - Ornithine/lysine/arginine decarboxylase Rfer_2126 arginine IPR011193 - Ornithine/lysine/arginine decarboxylase Rfer_2126 decarboxylase IPR011193 - Ornithine/lysine/arginine decarboxylase Rfer_2126 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_2127 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_2127 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_2128 binding IPR030678 - Rfer_2128|Rfer_2128|REF_jgi:Rfer_2128|GeneID:3962080 Rfer_2128 peptide IPR030678 - Rfer_2128|Rfer_2128|REF_jgi:Rfer_2128|GeneID:3962080 Rfer_2129 abc IPR000515 - MetI-like domain Rfer_2129 transmembrane IPR000515 - MetI-like domain Rfer_2129 transporter IPR000515 - MetI-like domain Rfer_2130 abc IPR000515 - MetI-like domain Rfer_2130 transmembrane IPR000515 - MetI-like domain Rfer_2130 transporter IPR000515 - MetI-like domain Rfer_2131 abc IPR003439 - ABC transporter-like Rfer_2131 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2131 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2131 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2131 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2133 domain-like IPR015946 - K homology domain-like, alpha/beta Rfer_2133 homology IPR015946 - K homology domain-like, alpha/beta Rfer_2133 beta IPR015946 - K homology domain-like, alpha/beta Rfer_2133 alpha IPR015946 - K homology domain-like, alpha/beta Rfer_2134 translation IPR009000 - Translation protein, beta-barrel domain Rfer_2134 beta-barrel IPR009000 - Translation protein, beta-barrel domain Rfer_2134 dna-binding IPR009061 - DNA binding domain, putative Rfer_2134 putative IPR009061 - DNA binding domain, putative Rfer_2134 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2134 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2134 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2134 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2135 domain-like IPR015946 - K homology domain-like, alpha/beta Rfer_2135 homology IPR015946 - K homology domain-like, alpha/beta Rfer_2135 beta IPR015946 - K homology domain-like, alpha/beta Rfer_2135 alpha IPR015946 - K homology domain-like, alpha/beta Rfer_2136 pseudouridine IPR020103 - Pseudouridine synthase, catalytic domain Rfer_2136 synthase IPR020103 - Pseudouridine synthase, catalytic domain Rfer_2136 catalytic IPR020103 - Pseudouridine synthase, catalytic domain Rfer_2137 translation IPR009000 - Translation protein, beta-barrel domain Rfer_2137 beta-barrel IPR009000 - Translation protein, beta-barrel domain Rfer_2137 elongation IPR009022 - Elongation factor G, III-V domain Rfer_2137 factor IPR009022 - Elongation factor G, III-V domain Rfer_2137 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2137 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2137 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2137 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2145 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_2145 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_2145 binding IPR009081 - Acyl carrier protein-like Rfer_2147 transmembrane IPR002549 - Uncharacterised protein family UPF0118 Rfer_2148 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2148 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2148 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2148 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2151 barrel IPR011008 - Dimeric alpha-beta barrel Rfer_2152 channel IPR006685 - Mechanosensitive ion channel MscS Rfer_2154 ribosomal IPR003489 - Ribosomal protein S30Ae/sigma 54 modulation protein Rfer_2154 sigma IPR003489 - Ribosomal protein S30Ae/sigma 54 modulation protein Rfer_2155 hydrolase IPR006379 - HAD-superfamily hydrolase, subfamily IIB Rfer_2155 had-superfamily IPR006379 - HAD-superfamily hydrolase, subfamily IIB Rfer_2155 subfamily IPR006379 - HAD-superfamily hydrolase, subfamily IIB Rfer_2156 hydrolase IPR015902 - Glycoside hydrolase, family 13 Rfer_2156 glycoside IPR015902 - Glycoside hydrolase, family 13 Rfer_2156 hydrolase IPR017853 - Glycoside hydrolase, superfamily Rfer_2156 glycoside IPR017853 - Glycoside hydrolase, superfamily Rfer_2157 fold IPR013783 - Immunoglobulin-like fold Rfer_2157 hydrolase IPR015902 - Glycoside hydrolase, family 13 Rfer_2157 glycoside IPR015902 - Glycoside hydrolase, family 13 Rfer_2157 hydrolase IPR017853 - Glycoside hydrolase, superfamily Rfer_2157 glycoside IPR017853 - Glycoside hydrolase, superfamily Rfer_2158 enzyme IPR011837 - Glycogen debranching enzyme, GlgX type Rfer_2158 hydrolase IPR013780 - Glycosyl hydrolase, family 13, all-beta Rfer_2158 glycosyl IPR013780 - Glycosyl hydrolase, family 13, all-beta Rfer_2158 fold IPR013783 - Immunoglobulin-like fold Rfer_2158 hydrolase IPR015902 - Glycoside hydrolase, family 13 Rfer_2158 glycoside IPR015902 - Glycoside hydrolase, family 13 Rfer_2158 hydrolase IPR017853 - Glycoside hydrolase, superfamily Rfer_2158 glycoside IPR017853 - Glycoside hydrolase, superfamily Rfer_2160 kinase-like IPR011009 - Protein kinase-like domain Rfer_2160 hydrolase IPR013780 - Glycosyl hydrolase, family 13, all-beta Rfer_2160 glycosyl IPR013780 - Glycosyl hydrolase, family 13, all-beta Rfer_2160 hydrolase IPR015902 - Glycoside hydrolase, family 13 Rfer_2160 glycoside IPR015902 - Glycoside hydrolase, family 13 Rfer_2160 hydrolase IPR017853 - Glycoside hydrolase, superfamily Rfer_2160 glycoside IPR017853 - Glycoside hydrolase, superfamily Rfer_2161 hydrolase IPR013780 - Glycosyl hydrolase, family 13, all-beta Rfer_2161 glycosyl IPR013780 - Glycosyl hydrolase, family 13, all-beta Rfer_2161 hydrolase IPR015902 - Glycoside hydrolase, family 13 Rfer_2161 glycoside IPR015902 - Glycoside hydrolase, family 13 Rfer_2161 hydrolase IPR017853 - Glycoside hydrolase, superfamily Rfer_2161 glycoside IPR017853 - Glycoside hydrolase, superfamily Rfer_2162 hydrolase IPR013780 - Glycosyl hydrolase, family 13, all-beta Rfer_2162 glycosyl IPR013780 - Glycosyl hydrolase, family 13, all-beta Rfer_2162 fold IPR013783 - Immunoglobulin-like fold Rfer_2162 hydrolase IPR015902 - Glycoside hydrolase, family 13 Rfer_2162 glycoside IPR015902 - Glycoside hydrolase, family 13 Rfer_2162 hydrolase IPR017853 - Glycoside hydrolase, superfamily Rfer_2162 glycoside IPR017853 - Glycoside hydrolase, superfamily Rfer_2163 glycosyl IPR001830 - Glycosyl transferase, family 20 Rfer_2163 transferase IPR001830 - Glycosyl transferase, family 20 Rfer_2164 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_2167 major IPR011701 - Major facilitator superfamily Rfer_2167 major IPR020846 - Major facilitator superfamily domain Rfer_2169 helicase IPR014001 - Helicase, superfamily 1/2, ATP-binding domain Rfer_2169 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2169 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2169 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2169 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2171 abc IPR003439 - ABC transporter-like Rfer_2171 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2171 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2171 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2171 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2172 methyltransferase IPR004033 - UbiE/COQ5 methyltransferase Rfer_2172 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_2173 domain-like IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_2173 dehydrogenase IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_2173 c-terminal IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_2173 6-phosphogluconate IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_2174 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_2175 helicase IPR014001 - Helicase, superfamily 1/2, ATP-binding domain Rfer_2175 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2175 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2175 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2175 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2176 transcription IPR000944 - Transcription regulator Rrf2-like Rfer_2176 regulator IPR000944 - Transcription regulator Rrf2-like Rfer_2176 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_2177 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_2181 shock IPR013126 - Heat shock protein 70 family Rfer_2181 heat IPR013126 - Heat shock protein 70 family Rfer_2183 ribonuclease IPR012337 - Ribonuclease H-like domain Rfer_2184 oxidoreductase IPR000103 - Pyridine nucleotide-disulphide oxidoreductase, class-II Rfer_2185 enzyme IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_2185 thiamine IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_2185 c-terminal IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_2186 c-terminal IPR009014 - Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Rfer_2186 oxidoreductase IPR009014 - Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Rfer_2187 catalytic IPR019752 - Pyruvate/ketoisovalerate oxidoreductase, catalytic domain Rfer_2187 pyruvate IPR019752 - Pyruvate/ketoisovalerate oxidoreductase, catalytic domain Rfer_2187 oxidoreductase IPR019752 - Pyruvate/ketoisovalerate oxidoreductase, catalytic domain Rfer_2188 dehydrogenase IPR002085 - Alcohol dehydrogenase superfamily, zinc-type Rfer_2191 enzyme IPR008279 - PEP-utilising enzyme, mobile domain Rfer_2191 subdomain IPR013816 - ATP-grasp fold, subdomain 2 Rfer_2191 fold IPR013816 - ATP-grasp fold, subdomain 2 Rfer_2191 kinase-like IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_2191 pyruvate IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_2192 symporter IPR001734 - Sodium/solute symporter Rfer_2192 sodium IPR001734 - Sodium/solute symporter Rfer_2192 solute IPR001734 - Sodium/solute symporter Rfer_2193 ribosomal IPR000529 - Ribosomal protein S6 Rfer_2193 translation IPR014717 - Translation elongation factor EF1B/ribosomal protein S6 Rfer_2193 elongation IPR014717 - Translation elongation factor EF1B/ribosomal protein S6 Rfer_2193 ribosomal IPR014717 - Translation elongation factor EF1B/ribosomal protein S6 Rfer_2193 factor IPR014717 - Translation elongation factor EF1B/ribosomal protein S6 Rfer_2196 ribosomal IPR000244 - Ribosomal protein L9 Rfer_2196 rnase IPR009027 - Ribosomal protein L9/RNase H1, N-terminal Rfer_2196 ribosomal IPR009027 - Ribosomal protein L9/RNase H1, N-terminal Rfer_2197 c-terminal IPR000788 - Ribonucleotide reductase large subunit, C-terminal Rfer_2197 reductase IPR000788 - Ribonucleotide reductase large subunit, C-terminal Rfer_2197 large IPR000788 - Ribonucleotide reductase large subunit, C-terminal Rfer_2198 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2198 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2198 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2198 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2199 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2199 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2199 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2199 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2204 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_2204 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_2205 dehydrogenase IPR012135 - Dihydroorotate dehydrogenase, class 1/ 2 Rfer_2205 barrel IPR013785 - Aldolase-type TIM barrel Rfer_2206 isomerase IPR004788 - Ribose 5-phosphate isomerase, type A Rfer_2207 fold IPR012336 - Thioredoxin-like fold Rfer_2208 catalytic IPR024079 - Metallopeptidase, catalytic domain Rfer_2208 metallopeptidase IPR024079 - Metallopeptidase, catalytic domain Rfer_2210 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_2211 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2211 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2211 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2211 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2211 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2211 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2211 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2212 c-terminal IPR009014 - Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Rfer_2212 oxidoreductase IPR009014 - Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Rfer_2214 reductase IPR016156 - FAD/NAD-linked reductase, dimerisation domain Rfer_2216 factor IPR002035 - von Willebrand factor, type A Rfer_2216 uncharacterised IPR006698 - Thermus phage phiYS40, Orf56 Rfer_2217 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2217 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2217 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2217 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2218 factor IPR011050 - Pectin lyase fold/virulence factor Rfer_2218 virulence IPR011050 - Pectin lyase fold/virulence factor Rfer_2218 lyase IPR011050 - Pectin lyase fold/virulence factor Rfer_2218 fold IPR011050 - Pectin lyase fold/virulence factor Rfer_2220 cyclase IPR029787 - Nucleotide cyclase Rfer_2220 nucleotide IPR029787 - Nucleotide cyclase Rfer_2221 dna-binding IPR010982 - Lambda repressor-like, DNA-binding domain Rfer_2222 phosphodiesterase IPR009097 - RNA ligase/cyclic nucleotide phosphodiesterase Rfer_2222 rna IPR009097 - RNA ligase/cyclic nucleotide phosphodiesterase Rfer_2222 ligase IPR009097 - RNA ligase/cyclic nucleotide phosphodiesterase Rfer_2222 nucleotide IPR009097 - RNA ligase/cyclic nucleotide phosphodiesterase Rfer_2227 dna-binding IPR010982 - Lambda repressor-like, DNA-binding domain Rfer_2227 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_2227 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2227 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2227 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2227 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2229 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_2232 rna IPR004441 - RNA methyltransferase TrmH family Rfer_2232 methyltransferase IPR004441 - RNA methyltransferase TrmH family Rfer_2232 alpha IPR029028 - Alpha/beta knot methyltransferases Rfer_2232 beta IPR029028 - Alpha/beta knot methyltransferases Rfer_2232 ribosomal IPR029064 - 50S ribosomal protein L30e-like Rfer_2234 fold IPR012336 - Thioredoxin-like fold Rfer_2239 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_2239 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_2241 phosphorylase IPR000053 - Pyrimidine-nucleoside phosphorylase Rfer_2242 translation IPR008991 - Translation protein SH3-like domain Rfer_2242 ribosomal IPR014722 - Ribosomal protein L2 domain 2 Rfer_2242 factor IPR020599 - Translation elongation factor P/YeiP Rfer_2242 translation IPR020599 - Translation elongation factor P/YeiP Rfer_2242 elongation IPR020599 - Translation elongation factor P/YeiP Rfer_2244 nuclease IPR000305 - GIY-YIG nuclease superfamily Rfer_2248 dna-binding IPR000119 - Histone-like bacterial DNA-binding protein Rfer_2249 factor IPR027304 - Trigger factor/SurA domain Rfer_2252 fold IPR012336 - Thioredoxin-like fold Rfer_2255 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2255 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2255 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2255 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2256 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2256 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2256 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2256 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2261 dna IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_2261 catalytic IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_2261 core IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_2261 enzyme IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_2261 catalytic IPR013762 - Integrase-like, catalytic core Rfer_2262 cyclase IPR029787 - Nucleotide cyclase Rfer_2262 nucleotide IPR029787 - Nucleotide cyclase Rfer_2263 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2263 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2263 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2263 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2263 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2263 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2263 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2267 hydrolase IPR003702 - Acetyl-CoA hydrolase/transferase Rfer_2267 transferase IPR003702 - Acetyl-CoA hydrolase/transferase Rfer_2268 dehydrogenase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_2268 acyl-coa IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_2268 oxidase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_2268 c-terminal IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_2268 dehydrogenase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_2268 oxidase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_2268 acyl-coa IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_2270 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_2271 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2271 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2271 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2271 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2271 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2271 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2271 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2272 domain-like IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_2272 dehydrogenase IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_2272 c-terminal IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_2272 6-phosphogluconate IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_2272 dehydrogenase IPR013328 - Dehydrogenase, multihelical Rfer_2272 6-phosphogluconate IPR013328 - Dehydrogenase, multihelical Rfer_2278 dna-binding IPR009061 - DNA binding domain, putative Rfer_2278 putative IPR009061 - DNA binding domain, putative Rfer_2278 dna-binding IPR010982 - Lambda repressor-like, DNA-binding domain Rfer_2278 fold IPR014710 - RmlC-like jelly roll fold Rfer_2283 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_2283 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_2284 cyclase IPR029787 - Nucleotide cyclase Rfer_2284 nucleotide IPR029787 - Nucleotide cyclase Rfer_2286 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_2286 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_2286 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_2286 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_2287 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2287 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2287 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2287 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2288 dehydrogenase IPR005990 - Inosine-5'-monophosphate dehydrogenase Rfer_2288 barrel IPR013785 - Aldolase-type TIM barrel Rfer_2292 synthase IPR002684 - Biotin synthase/Biotin biosynthesis bifunctional protein BioAB Rfer_2292 biosynthesis IPR002684 - Biotin synthase/Biotin biosynthesis bifunctional protein BioAB Rfer_2292 radical IPR007197 - Radical SAM Rfer_2292 barrel IPR013785 - Aldolase-type TIM barrel Rfer_2294 enzyme IPR000277 - Cys/Met metabolism, pyridoxal phosphate-dependent enzyme Rfer_2294 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_2296 synthetase IPR001114 - Adenylosuccinate synthetase Rfer_2296 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2296 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2296 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2296 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2297 ligase IPR004516 - Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit Rfer_2297 phosphoribosyltransferase IPR004516 - Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit Rfer_2297 atp IPR004516 - Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit Rfer_2297 regulatory IPR004516 - Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit Rfer_2301 binding IPR006073 - GTP binding domain Rfer_2301 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2301 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2301 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2301 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2303 binding IPR006073 - GTP binding domain Rfer_2303 domain-like IPR015946 - K homology domain-like, alpha/beta Rfer_2303 homology IPR015946 - K homology domain-like, alpha/beta Rfer_2303 beta IPR015946 - K homology domain-like, alpha/beta Rfer_2303 alpha IPR015946 - K homology domain-like, alpha/beta Rfer_2303 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2303 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2303 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2303 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2305 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_2306 ligase IPR004516 - Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit Rfer_2306 phosphoribosyltransferase IPR004516 - Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit Rfer_2306 atp IPR004516 - Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit Rfer_2306 regulatory IPR004516 - Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit Rfer_2306 aminoacyl-trna IPR006195 - Aminoacyl-tRNA synthetase, class II Rfer_2306 synthetase IPR006195 - Aminoacyl-tRNA synthetase, class II Rfer_2307 synthase IPR004588 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type Rfer_2308 dna-binding IPR010982 - Lambda repressor-like, DNA-binding domain Rfer_2309 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_2310 methyltransferase IPR004383 - Ribosomal RNA large subunit methyltransferase RlmN/Cfr Rfer_2310 ribosomal IPR004383 - Ribosomal RNA large subunit methyltransferase RlmN/Cfr Rfer_2310 large IPR004383 - Ribosomal RNA large subunit methyltransferase RlmN/Cfr Rfer_2310 rna IPR004383 - Ribosomal RNA large subunit methyltransferase RlmN/Cfr Rfer_2310 radical IPR007197 - Radical SAM Rfer_2310 barrel IPR013785 - Aldolase-type TIM barrel Rfer_2312 pseudouridine IPR020103 - Pseudouridine synthase, catalytic domain Rfer_2312 synthase IPR020103 - Pseudouridine synthase, catalytic domain Rfer_2312 catalytic IPR020103 - Pseudouridine synthase, catalytic domain Rfer_2313 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_2314 pseudouridine IPR020103 - Pseudouridine synthase, catalytic domain Rfer_2314 synthase IPR020103 - Pseudouridine synthase, catalytic domain Rfer_2314 catalytic IPR020103 - Pseudouridine synthase, catalytic domain Rfer_2315 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_2316 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2316 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2316 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2316 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2317 phosphatase IPR015655 - Protein phosphatase 2C Rfer_2318 atpase IPR005654 - ATPase, AFG1-like Rfer_2318 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2318 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2318 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2318 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2319 reductase IPR016156 - FAD/NAD-linked reductase, dimerisation domain Rfer_2321 dehydrogenase IPR011603 - 2-oxoglutarate dehydrogenase E1 component Rfer_2321 component IPR011603 - 2-oxoglutarate dehydrogenase E1 component Rfer_2322 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_2322 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_2325 abc IPR000515 - MetI-like domain Rfer_2325 transmembrane IPR000515 - MetI-like domain Rfer_2325 transporter IPR000515 - MetI-like domain Rfer_2326 abc IPR000515 - MetI-like domain Rfer_2326 transmembrane IPR000515 - MetI-like domain Rfer_2326 transporter IPR000515 - MetI-like domain Rfer_2327 abc IPR003439 - ABC transporter-like Rfer_2327 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2327 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2327 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2327 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2327 amino IPR030679 - Rfer_2327|Rfer_2327|REF_jgi:Rfer_2327|GeneID:3964322 Rfer_2327 component IPR030679 - Rfer_2327|Rfer_2327|REF_jgi:Rfer_2327|GeneID:3964322 Rfer_2327 transport IPR030679 - Rfer_2327|Rfer_2327|REF_jgi:Rfer_2327|GeneID:3964322 Rfer_2327 atpase IPR030679 - Rfer_2327|Rfer_2327|REF_jgi:Rfer_2327|GeneID:3964322 Rfer_2327 acid IPR030679 - Rfer_2327|Rfer_2327|REF_jgi:Rfer_2327|GeneID:3964322 Rfer_2331 esterase IPR013830 - Rfer_2331|Rfer_2331|REF_jgi:Rfer_2331|GeneID:3964326 Rfer_2332 c-terminal IPR016164 - FAD-linked oxidase-like, C-terminal Rfer_2333 dehydrogenase IPR000447 - FAD-dependent glycerol-3-phosphate dehydrogenase Rfer_2334 kinase IPR000577 - Rfer_2334|Rfer_2334|REF_jgi:Rfer_2334|GeneID:3962667 Rfer_2337 cyclase IPR029787 - Nucleotide cyclase Rfer_2337 nucleotide IPR029787 - Nucleotide cyclase Rfer_2338 phospholipase IPR008947 - Phospholipase C/P1 nuclease domain Rfer_2338 nuclease IPR008947 - Phospholipase C/P1 nuclease domain Rfer_2340 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_2340 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_2340 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_2340 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_2341 complex IPR010207 - Electron transport complex, RnfB Rfer_2341 transport IPR010207 - Electron transport complex, RnfB Rfer_2341 electron IPR010207 - Electron transport complex, RnfB Rfer_2345 barrel IPR013785 - Aldolase-type TIM barrel Rfer_2347 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_2347 domain-like IPR029016 - GAF domain-like Rfer_2348 acyl-coa IPR016181 - Acyl-CoA N-acyltransferase Rfer_2349 acyl-coa IPR016181 - Acyl-CoA N-acyltransferase Rfer_2351 dehydrogenase IPR012133 - Alpha-hydroxy acid dehydrogenase, FMN-dependent Rfer_2351 acid IPR012133 - Alpha-hydroxy acid dehydrogenase, FMN-dependent Rfer_2351 barrel IPR013785 - Aldolase-type TIM barrel Rfer_2352 fold IPR011761 - ATP-grasp fold Rfer_2352 acyl-coa IPR016181 - Acyl-CoA N-acyltransferase Rfer_2355 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_2356 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2356 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2356 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2356 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2356 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2356 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2356 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2358 phosphatase-like IPR029052 - Metallo-dependent phosphatase-like Rfer_2361 fold IPR014710 - RmlC-like jelly roll fold Rfer_2364 membrane IPR012994 - Membrane bound YbgT-like Rfer_2365 lyase IPR000362 - Fumarate lyase family Rfer_2366 large IPR001030 - Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha Rfer_2366 aconitase IPR001030 - Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha Rfer_2366 alpha IPR001030 - Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha Rfer_2366 dehydratase IPR001030 - Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha Rfer_2366 beta IPR001030 - Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha Rfer_2366 alpha IPR001030 - Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha Rfer_2366 dehydratase IPR015928 - Aconitase/3-isopropylmalate dehydratase, swivel Rfer_2366 aconitase IPR015928 - Aconitase/3-isopropylmalate dehydratase, swivel Rfer_2366 aconitase IPR015937 - Aconitase/isopropylmalate dehydratase Rfer_2366 dehydratase IPR015937 - Aconitase/isopropylmalate dehydratase Rfer_2370 reductase IPR029500 - NADPH-dependent 7-cyano-7-deazaguanine reductase QueF Rfer_2371 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_2371 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_2371 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_2371 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_2376 ligase IPR002303 - Valine-tRNA ligase Rfer_2376 synthetase IPR009008 - Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain Rfer_2376 aminoacyl-trna IPR009080 - Aminoacyl-tRNA synthetase, class 1a, anticodon-binding Rfer_2376 synthetase IPR009080 - Aminoacyl-tRNA synthetase, class 1a, anticodon-binding Rfer_2376 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2376 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2376 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2376 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2378 synthase IPR005856 - Cysteine synthase K/M Rfer_2379 fold IPR012336 - Thioredoxin-like fold Rfer_2381 barrel IPR013785 - Aldolase-type TIM barrel Rfer_2382 acyl-coa IPR006684 - Acyl-CoA thioester hydrolase YbgC/YbaW family Rfer_2382 hydrolase IPR006684 - Acyl-CoA thioester hydrolase YbgC/YbaW family Rfer_2382 acyl-coa IPR016181 - Acyl-CoA N-acyltransferase Rfer_2383 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_2383 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_2383 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_2383 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_2384 dehydrogenase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_2384 acyl-coa IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_2384 oxidase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_2384 c-terminal IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_2384 dehydrogenase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_2384 oxidase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_2384 acyl-coa IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_2386 domain-like IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_2386 dehydrogenase IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_2386 c-terminal IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_2386 6-phosphogluconate IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_2386 dehydrogenase IPR013328 - Dehydrogenase, multihelical Rfer_2386 6-phosphogluconate IPR013328 - Dehydrogenase, multihelical Rfer_2387 abc IPR003439 - ABC transporter-like Rfer_2387 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2387 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2387 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2387 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2388 abc IPR003439 - ABC transporter-like Rfer_2388 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2388 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2388 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2388 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2389 transporter IPR001851 - ABC transporter, permease Rfer_2389 abc IPR001851 - ABC transporter, permease Rfer_2389 permease IPR001851 - ABC transporter, permease Rfer_2390 transporter IPR001851 - ABC transporter, permease Rfer_2390 abc IPR001851 - ABC transporter, permease Rfer_2390 permease IPR001851 - ABC transporter, permease Rfer_2391 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_2391 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_2391 binding IPR028082 - Periplasmic binding protein-like I Rfer_2392 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_2392 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_2392 binding IPR028082 - Periplasmic binding protein-like I Rfer_2393 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_2393 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_2394 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_2394 fold IPR014710 - RmlC-like jelly roll fold Rfer_2399 factor IPR027304 - Trigger factor/SurA domain Rfer_2400 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2400 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2400 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2400 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2400 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2400 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2400 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2401 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_2403 dehydrogenase IPR001557 - L-lactate/malate dehydrogenase Rfer_2403 hydrolase IPR015955 - Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal Rfer_2403 c-terminal IPR015955 - Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal Rfer_2403 glycoside IPR015955 - Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal Rfer_2403 dehydrogenase IPR015955 - Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal Rfer_2404 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_2404 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_2404 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_2404 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_2408 beta IPR011206 - Citrate lyase beta subunit-like Rfer_2408 lyase IPR011206 - Citrate lyase beta subunit-like Rfer_2408 kinase-like IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_2408 pyruvate IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_2409 acyl IPR023439 - Malonate decarboxylase/citrate lyase acyl carrier protein Rfer_2409 decarboxylase IPR023439 - Malonate decarboxylase/citrate lyase acyl carrier protein Rfer_2409 lyase IPR023439 - Malonate decarboxylase/citrate lyase acyl carrier protein Rfer_2409 carrier IPR023439 - Malonate decarboxylase/citrate lyase acyl carrier protein Rfer_2410 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2410 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2410 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2410 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2410 acyl-coa IPR016181 - Acyl-CoA N-acyltransferase Rfer_2412 symporter IPR001898 - Sodium/sulphate symporter Rfer_2412 sodium IPR001898 - Sodium/sulphate symporter Rfer_2416 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_2416 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_2416 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_2416 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_2417 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_2418 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2418 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2418 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2418 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2419 virulence IPR017039 - Virulence factor BrkB Rfer_2419 factor IPR017039 - Virulence factor BrkB Rfer_2420 c-terminal IPR010918 - AIR synthase-related protein, C-terminal domain Rfer_2421 peptidase IPR000994 - Peptidase M24, structural domain Rfer_2421 peptidase IPR001714 - Peptidase M24, methionine aminopeptidase Rfer_2421 aminopeptidase IPR001714 - Peptidase M24, methionine aminopeptidase Rfer_2423 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2423 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2423 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2423 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2424 esterase IPR013830 - Rfer_2424|Rfer_2424|REF_jgi:Rfer_2424|GeneID:3961251 Rfer_2425 abc IPR003439 - ABC transporter-like Rfer_2425 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2425 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2425 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2425 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2426 channel IPR006685 - Mechanosensitive ion channel MscS Rfer_2432 transmembrane IPR016174 - Di-haem cytochrome, transmembrane Rfer_2432 cytochrome IPR016174 - Di-haem cytochrome, transmembrane Rfer_2436 barrel IPR012349 - FMN-binding split barrel Rfer_2437 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_2437 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_2438 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_2439 dehydrogenase IPR002085 - Alcohol dehydrogenase superfamily, zinc-type Rfer_2441 fold IPR014710 - RmlC-like jelly roll fold Rfer_2442 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_2442 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_2442 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_2442 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_2443 major IPR011701 - Major facilitator superfamily Rfer_2443 major IPR020846 - Major facilitator superfamily domain Rfer_2444 reductase IPR001395 - Aldo/keto reductase Rfer_2444 beta IPR001395 - Aldo/keto reductase Rfer_2444 channel IPR001395 - Aldo/keto reductase Rfer_2444 potassium IPR001395 - Aldo/keto reductase Rfer_2445 reductase IPR001395 - Aldo/keto reductase Rfer_2445 beta IPR001395 - Aldo/keto reductase Rfer_2445 channel IPR001395 - Aldo/keto reductase Rfer_2445 potassium IPR001395 - Aldo/keto reductase Rfer_2447 transporter IPR003370 - Chromate transporter Rfer_2453 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2453 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2453 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2453 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2453 domain-like IPR029016 - GAF domain-like Rfer_2458 reductase IPR004511 - Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase Rfer_2458 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2458 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2458 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2458 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2459 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2459 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2459 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2459 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2460 translation IPR009000 - Translation protein, beta-barrel domain Rfer_2460 beta-barrel IPR009000 - Translation protein, beta-barrel domain Rfer_2460 c-terminal IPR009001 - Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Rfer_2460 initiation IPR009001 - Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Rfer_2460 factor IPR009001 - Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Rfer_2460 translation IPR009001 - Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Rfer_2460 factor IPR009001 - Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Rfer_2460 elongation IPR009001 - Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Rfer_2460 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2460 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2460 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2460 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2462 oxidoreductase IPR000103 - Pyridine nucleotide-disulphide oxidoreductase, class-II Rfer_2463 permease IPR001248 - Permease, cytosine/purines, uracil, thiamine, allantoin Rfer_2465 factor IPR003749 - ThiamineS/Molybdopterin converting factor subunit 1 Rfer_2465 molybdopterin IPR003749 - ThiamineS/Molybdopterin converting factor subunit 1 Rfer_2466 barrel IPR013785 - Aldolase-type TIM barrel Rfer_2467 phosphate IPR003733 - Thiamine phosphate synthase Rfer_2467 synthase IPR003733 - Thiamine phosphate synthase Rfer_2467 thiamine IPR003733 - Thiamine phosphate synthase Rfer_2467 barrel IPR013785 - Aldolase-type TIM barrel Rfer_2468 cytochrome IPR009056 - Cytochrome c-like domain Rfer_2468 c-like IPR009056 - Cytochrome c-like domain Rfer_2471 phosphate IPR003733 - Thiamine phosphate synthase Rfer_2471 synthase IPR003733 - Thiamine phosphate synthase Rfer_2471 thiamine IPR003733 - Thiamine phosphate synthase Rfer_2471 barrel IPR013785 - Aldolase-type TIM barrel Rfer_2475 lyase IPR011166 - Beta-eliminating lyase family Rfer_2475 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_2477 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_2478 enzyme IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_2478 thiamine IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_2478 c-terminal IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_2478 enzyme IPR012001 - Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Rfer_2478 thiamine IPR012001 - Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Rfer_2479 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_2479 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_2480 cyclase IPR029787 - Nucleotide cyclase Rfer_2480 nucleotide IPR029787 - Nucleotide cyclase Rfer_2483 ribonuclease IPR012337 - Ribonuclease H-like domain Rfer_2484 acyl-coa IPR016181 - Acyl-CoA N-acyltransferase Rfer_2485 cyclase IPR029787 - Nucleotide cyclase Rfer_2485 nucleotide IPR029787 - Nucleotide cyclase Rfer_2486 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2486 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2486 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2486 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2486 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2486 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2486 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2486 domain-like IPR029016 - GAF domain-like Rfer_2487 cyclase IPR029787 - Nucleotide cyclase Rfer_2487 nucleotide IPR029787 - Nucleotide cyclase Rfer_2488 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_2488 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_2489 acyl-coa IPR016181 - Acyl-CoA N-acyltransferase Rfer_2490 c-terminal-like IPR010987 - Glutathione S-transferase, C-terminal-like Rfer_2490 fold IPR012336 - Thioredoxin-like fold Rfer_2491 dehydrogenase IPR002085 - Alcohol dehydrogenase superfamily, zinc-type Rfer_2493 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_2493 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_2494 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_2494 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_2494 binding IPR028082 - Periplasmic binding protein-like I Rfer_2495 cyclase IPR029787 - Nucleotide cyclase Rfer_2495 nucleotide IPR029787 - Nucleotide cyclase Rfer_2499 esterase IPR013830 - Rfer_2499|Rfer_2499|REF_jgi:Rfer_2499|GeneID:3962933 Rfer_2500 membrane IPR004299 - Membrane bound O-acyl transferase, MBOAT Rfer_2500 transferase IPR004299 - Membrane bound O-acyl transferase, MBOAT Rfer_2501 cytochrome IPR009056 - Cytochrome c-like domain Rfer_2501 c-like IPR009056 - Cytochrome c-like domain Rfer_2504 c-terminal IPR009014 - Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Rfer_2504 oxidoreductase IPR009014 - Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Rfer_2510 subfamily IPR006383 - HAD-superfamily hydrolase, subfamily IB, PSPase-like Rfer_2510 had-superfamily IPR006383 - HAD-superfamily hydrolase, subfamily IB, PSPase-like Rfer_2510 hydrolase IPR006383 - HAD-superfamily hydrolase, subfamily IB, PSPase-like Rfer_2511 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2511 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2511 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2511 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2512 c-terminal IPR010918 - AIR synthase-related protein, C-terminal domain Rfer_2513 major IPR011701 - Major facilitator superfamily Rfer_2513 major IPR020846 - Major facilitator superfamily domain Rfer_2516 endonuclease IPR011335 - Restriction endonuclease type II-like Rfer_2518 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_2522 fold IPR012336 - Thioredoxin-like fold Rfer_2524 peptidase IPR005074 - Peptidase C39, bacteriocin processing Rfer_2524 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_2527 channel IPR006685 - Mechanosensitive ion channel MscS Rfer_2528 histone IPR000286 - Histone deacetylase superfamily Rfer_2529 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2529 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2529 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2529 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2533 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_2537 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_2537 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_2537 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_2537 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_2539 potassium IPR003855 - K+ potassium transporter Rfer_2539 transporter IPR003855 - K+ potassium transporter Rfer_2540 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_2541 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2541 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2541 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2541 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2541 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2541 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2541 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2542 exchanger IPR006153 - Cation/H+ exchanger Rfer_2542 cation IPR006153 - Cation/H+ exchanger Rfer_2544 cyclase IPR029787 - Nucleotide cyclase Rfer_2544 nucleotide IPR029787 - Nucleotide cyclase Rfer_2548 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_2548 factor IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_2548 polymerase IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_2548 sigma IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_2548 rna IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_2548 rna IPR014284 - RNA polymerase sigma-70 like domain Rfer_2548 polymerase IPR014284 - RNA polymerase sigma-70 like domain Rfer_2550 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2550 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2550 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2550 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2552 dioxygenase IPR029068 - Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Rfer_2552 resistance IPR029068 - Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Rfer_2553 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_2555 abc IPR000515 - MetI-like domain Rfer_2555 transmembrane IPR000515 - MetI-like domain Rfer_2555 transporter IPR000515 - MetI-like domain Rfer_2556 abc IPR003439 - ABC transporter-like Rfer_2556 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2556 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2556 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2556 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2560 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_2560 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_2562 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_2562 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_2562 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_2562 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_2566 barrel IPR011008 - Dimeric alpha-beta barrel Rfer_2570 transporter IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_2570 receptor IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_2570 solute IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_2571 hydrolase IPR015797 - NUDIX hydrolase domain-like Rfer_2571 domain-like IPR015797 - NUDIX hydrolase domain-like Rfer_2572 nuclease IPR000305 - GIY-YIG nuclease superfamily Rfer_2572 ribonuclease IPR012337 - Ribonuclease H-like domain Rfer_2575 fold IPR014710 - RmlC-like jelly roll fold Rfer_2576 esterase IPR010126 - Esterase, PHB depolymerase Rfer_2576 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_2576 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_2576 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_2576 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_2580 helicase IPR016136 - DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Rfer_2580 c-terminal IPR016136 - DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Rfer_2580 dna IPR016136 - DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Rfer_2580 dna IPR016136 - DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Rfer_2580 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2580 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2580 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2580 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2581 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_2581 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_2585 abc IPR003439 - ABC transporter-like Rfer_2585 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2585 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2585 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2585 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2586 abc IPR003439 - ABC transporter-like Rfer_2586 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2586 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2586 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2586 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2587 transporter IPR001851 - ABC transporter, permease Rfer_2587 abc IPR001851 - ABC transporter, permease Rfer_2587 permease IPR001851 - ABC transporter, permease Rfer_2588 transporter IPR001851 - ABC transporter, permease Rfer_2588 abc IPR001851 - ABC transporter, permease Rfer_2588 permease IPR001851 - ABC transporter, permease Rfer_2589 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_2589 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_2589 binding IPR028082 - Periplasmic binding protein-like I Rfer_2592 dehydrogenase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_2592 acyl-coa IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_2592 oxidase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_2592 c-terminal IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_2592 dehydrogenase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_2592 oxidase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_2592 acyl-coa IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_2593 dehydrogenase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_2593 acyl-coa IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_2593 oxidase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_2593 c-terminal IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_2593 dehydrogenase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_2593 oxidase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_2593 acyl-coa IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_2595 domain-like IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_2595 dehydrogenase IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_2595 c-terminal IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_2595 6-phosphogluconate IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_2595 dehydrogenase IPR013328 - Dehydrogenase, multihelical Rfer_2595 6-phosphogluconate IPR013328 - Dehydrogenase, multihelical Rfer_2596 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_2596 domain-like IPR029016 - GAF domain-like Rfer_2599 transcriptional IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_2599 c-terminal IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_2599 regulator IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_2600 membrane IPR006143 - RND efflux pump, membrane fusion protein Rfer_2600 pump IPR006143 - RND efflux pump, membrane fusion protein Rfer_2600 efflux IPR006143 - RND efflux pump, membrane fusion protein Rfer_2601 resistance IPR001036 - Acriflavin resistance protein Rfer_2602 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_2604 outer IPR003423 - Outer membrane efflux protein Rfer_2604 efflux IPR003423 - Outer membrane efflux protein Rfer_2604 membrane IPR003423 - Outer membrane efflux protein Rfer_2606 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_2607 glycosylase IPR011257 - DNA glycosylase Rfer_2607 dna IPR011257 - DNA glycosylase Rfer_2608 cyclase IPR029787 - Nucleotide cyclase Rfer_2608 nucleotide IPR029787 - Nucleotide cyclase Rfer_2609 histidine IPR029033 - Histidine phosphatase superfamily Rfer_2609 phosphatase IPR029033 - Histidine phosphatase superfamily Rfer_2612 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2612 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2612 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2612 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2613 synthase IPR007115 - 6-pyruvoyl tetrahydropterin synthase/QueD family protein Rfer_2614 radical IPR007197 - Radical SAM Rfer_2614 barrel IPR013785 - Aldolase-type TIM barrel Rfer_2614 synthase-like IPR024924 - 7-carboxy-7-deazaguanine synthase-like Rfer_2615 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_2618 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2618 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2618 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2618 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2619 abc IPR003439 - ABC transporter-like Rfer_2619 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2619 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2619 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2619 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2621 binding IPR002491 - ABC transporter periplasmic binding domain Rfer_2621 periplasmic IPR002491 - ABC transporter periplasmic binding domain Rfer_2621 abc IPR002491 - ABC transporter periplasmic binding domain Rfer_2621 transporter IPR002491 - ABC transporter periplasmic binding domain Rfer_2622 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2622 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2622 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2622 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2623 binding IPR002491 - ABC transporter periplasmic binding domain Rfer_2623 periplasmic IPR002491 - ABC transporter periplasmic binding domain Rfer_2623 abc IPR002491 - ABC transporter periplasmic binding domain Rfer_2623 transporter IPR002491 - ABC transporter periplasmic binding domain Rfer_2624 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2624 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2624 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2624 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2629 cyclase IPR029787 - Nucleotide cyclase Rfer_2629 nucleotide IPR029787 - Nucleotide cyclase Rfer_2631 c-terminal-like IPR010987 - Glutathione S-transferase, C-terminal-like Rfer_2631 fold IPR012336 - Thioredoxin-like fold Rfer_2632 fold IPR012336 - Thioredoxin-like fold Rfer_2633 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_2634 coenzyme IPR004165 - Coenzyme A transferase family I Rfer_2634 transferase IPR004165 - Coenzyme A transferase family I Rfer_2635 coenzyme IPR004165 - Coenzyme A transferase family I Rfer_2635 transferase IPR004165 - Coenzyme A transferase family I Rfer_2636 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_2637 cyclase IPR029787 - Nucleotide cyclase Rfer_2637 nucleotide IPR029787 - Nucleotide cyclase Rfer_2638 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_2641 dna IPR013760 - DNA topoisomerase, type IIA-like domain Rfer_2641 topoisomerase IPR013760 - DNA topoisomerase, type IIA-like domain Rfer_2641 arginine IPR024946 - Arginine repressor C-terminal-like domain Rfer_2641 repressor IPR024946 - Arginine repressor C-terminal-like domain Rfer_2641 c-terminal-like IPR024946 - Arginine repressor C-terminal-like domain Rfer_2642 iia IPR001241 - DNA topoisomerase, type IIA Rfer_2642 topoisomerase IPR001241 - DNA topoisomerase, type IIA Rfer_2642 dna IPR001241 - DNA topoisomerase, type IIA Rfer_2642 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2642 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2642 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2642 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2642 dna IPR013760 - DNA topoisomerase, type IIA-like domain Rfer_2642 topoisomerase IPR013760 - DNA topoisomerase, type IIA-like domain Rfer_2642 fold IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_2642 ribosomal IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_2646 triphosphate IPR008180 - Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase Rfer_2646 deaminase IPR008180 - Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase Rfer_2646 triphosphate IPR008180 - Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase Rfer_2648 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2648 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2648 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2648 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2649 barrel IPR013785 - Aldolase-type TIM barrel Rfer_2650 domain-like IPR029017 - Enolase N-terminal domain-like Rfer_2650 domain-like IPR029065 - Enolase C-terminal domain-like Rfer_2650 c-terminal IPR029065 - Enolase C-terminal domain-like Rfer_2654 dna IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_2654 catalytic IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_2654 core IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_2654 enzyme IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_2654 catalytic IPR013762 - Integrase-like, catalytic core Rfer_2655 membrane IPR004776 - Auxin efflux carrier Rfer_2655 transport IPR004776 - Auxin efflux carrier Rfer_2658 serine IPR001085 - Serine hydroxymethyltransferase Rfer_2658 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_2667 beta-barrel IPR017938 - Riboflavin synthase-like beta-barrel Rfer_2667 synthase-like IPR017938 - Riboflavin synthase-like beta-barrel Rfer_2668 alpha IPR017945 - DHBP synthase RibB-like alpha/beta domain Rfer_2668 beta IPR017945 - DHBP synthase RibB-like alpha/beta domain Rfer_2668 synthase IPR017945 - DHBP synthase RibB-like alpha/beta domain Rfer_2669 synthase IPR002180 - 6,7-dimethyl-8-ribityllumazine synthase Rfer_2671 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_2673 transport IPR003400 - Biopolymer transport protein ExbD/TolR Rfer_2676 polysaccharide IPR003715 - Polysaccharide export protein Rfer_2676 export IPR003715 - Polysaccharide export protein Rfer_2678 fold IPR014710 - RmlC-like jelly roll fold Rfer_2681 synthetase IPR000924 - Glutamyl/glutaminyl-tRNA synthetase Rfer_2681 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2681 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2681 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2681 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2681 catalytic IPR020058 - Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain Rfer_2681 synthetase IPR020058 - Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain Rfer_2682 enzyme IPR000277 - Cys/Met metabolism, pyridoxal phosphate-dependent enzyme Rfer_2682 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_2686 synthetase IPR001645 - Folylpolyglutamate synthetase Rfer_2687 fold IPR012336 - Thioredoxin-like fold Rfer_2688 fold IPR014710 - RmlC-like jelly roll fold Rfer_2689 synthase IPR001518 - Argininosuccinate synthase Rfer_2689 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2689 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2689 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2689 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2697 reductase IPR001395 - Aldo/keto reductase Rfer_2697 beta IPR001395 - Aldo/keto reductase Rfer_2697 channel IPR001395 - Aldo/keto reductase Rfer_2697 potassium IPR001395 - Aldo/keto reductase Rfer_2698 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_2698 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_2699 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_2699 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_2699 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_2699 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_2702 subfamily IPR006439 - HAD hydrolase, subfamily IA Rfer_2702 hydrolase IPR006439 - HAD hydrolase, subfamily IA Rfer_2702 phosphatase IPR023198 - Phosphoglycolate phosphatase, domain 2 Rfer_2703 aminopeptidase IPR001930 - Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase Rfer_2703 hydrolase IPR001930 - Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase Rfer_2703 peptidase IPR001930 - Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase Rfer_2705 esterase IPR013830 - Rfer_2705|Rfer_2705|REF_jgi:Rfer_2705|GeneID:3962991 Rfer_2714 membrane IPR006143 - RND efflux pump, membrane fusion protein Rfer_2714 pump IPR006143 - RND efflux pump, membrane fusion protein Rfer_2714 efflux IPR006143 - RND efflux pump, membrane fusion protein Rfer_2715 c-terminal IPR011049 - Serralysin-like metalloprotease, C-terminal Rfer_2715 fold IPR013783 - Immunoglobulin-like fold Rfer_2715 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_2715 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_2715 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_2715 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_2717 c-terminal IPR011049 - Serralysin-like metalloprotease, C-terminal Rfer_2717 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_2717 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_2717 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_2717 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_2719 c-terminal IPR011049 - Serralysin-like metalloprotease, C-terminal Rfer_2719 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_2719 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_2719 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_2719 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_2722 abc IPR003439 - ABC transporter-like Rfer_2722 peptidase IPR005074 - Peptidase C39, bacteriocin processing Rfer_2722 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2722 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2722 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2722 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2728 kinase-like IPR011009 - Protein kinase-like domain Rfer_2728 domain-like IPR029016 - GAF domain-like Rfer_2730 unknown IPR007497 - Protein of unknown function DUF541 Rfer_2732 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_2733 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2733 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2733 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2733 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2733 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2733 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2733 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2734 radical IPR007197 - Radical SAM Rfer_2736 cytochrome IPR009056 - Cytochrome c-like domain Rfer_2736 c-like IPR009056 - Cytochrome c-like domain Rfer_2739 cytochrome IPR011031 - Multihaem cytochrome Rfer_2740 transmembrane IPR016174 - Di-haem cytochrome, transmembrane Rfer_2740 cytochrome IPR016174 - Di-haem cytochrome, transmembrane Rfer_2741 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2741 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2741 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2741 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2742 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2742 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2742 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2742 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2742 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2742 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2742 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2746 abc IPR000515 - MetI-like domain Rfer_2746 transmembrane IPR000515 - MetI-like domain Rfer_2746 transporter IPR000515 - MetI-like domain Rfer_2747 abc IPR003439 - ABC transporter-like Rfer_2747 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2747 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2747 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2747 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2752 dehydrogenase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_2752 acyl-coa IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_2752 oxidase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_2752 c-terminal IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_2752 dehydrogenase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_2752 oxidase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_2752 acyl-coa IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_2754 domain-like IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_2754 dehydrogenase IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_2754 c-terminal IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_2754 6-phosphogluconate IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_2754 dehydrogenase IPR013328 - Dehydrogenase, multihelical Rfer_2754 6-phosphogluconate IPR013328 - Dehydrogenase, multihelical Rfer_2756 transporter IPR003370 - Chromate transporter Rfer_2757 transporter IPR003370 - Chromate transporter Rfer_2758 binding IPR026045 - Ferric binding protein Rfer_2759 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2759 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2759 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2759 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2760 ribosomal IPR014719 - Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Rfer_2760 c-terminal IPR014719 - Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Rfer_2760 adaptor IPR014719 - Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Rfer_2760 l12 IPR014719 - Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Rfer_2763 unknown IPR003795 - Protein of unknown function DUF192 Rfer_2765 pseudouridine IPR020103 - Pseudouridine synthase, catalytic domain Rfer_2765 synthase IPR020103 - Pseudouridine synthase, catalytic domain Rfer_2765 catalytic IPR020103 - Pseudouridine synthase, catalytic domain Rfer_2766 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2766 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2766 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2766 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2766 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2766 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2766 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2769 acyl-coa IPR016181 - Acyl-CoA N-acyltransferase Rfer_2771 rna IPR001737 - Ribosomal RNA adenine methylase transferase Rfer_2771 ribosomal IPR001737 - Ribosomal RNA adenine methylase transferase Rfer_2771 methyltransferase IPR001737 - Ribosomal RNA adenine methylase transferase Rfer_2771 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_2778 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_2779 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_2779 factor IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_2779 polymerase IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_2779 sigma IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_2779 rna IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_2779 rna IPR014284 - RNA polymerase sigma-70 like domain Rfer_2779 polymerase IPR014284 - RNA polymerase sigma-70 like domain Rfer_2781 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_2783 dehydrogenase IPR002085 - Alcohol dehydrogenase superfamily, zinc-type Rfer_2785 fold IPR013783 - Immunoglobulin-like fold Rfer_2785 biosynthesis IPR014438 - Glucan biosynthesis, periplasmic, MdoG/D Rfer_2785 periplasmic IPR014438 - Glucan biosynthesis, periplasmic, MdoG/D Rfer_2786 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2786 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2786 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2786 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2788 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2788 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2788 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2788 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2788 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2788 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2788 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2790 major IPR011701 - Major facilitator superfamily Rfer_2790 major IPR020846 - Major facilitator superfamily domain Rfer_2791 major IPR011701 - Major facilitator superfamily Rfer_2791 major IPR020846 - Major facilitator superfamily domain Rfer_2794 reductase IPR020945 - DMSO/Nitrate reductase chaperone Rfer_2794 chaperone IPR020945 - DMSO/Nitrate reductase chaperone Rfer_2798 enzyme IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_2798 thiamine IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_2798 c-terminal IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_2799 c-terminal IPR009014 - Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Rfer_2799 oxidoreductase IPR009014 - Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Rfer_2799 catalytic IPR019752 - Pyruvate/ketoisovalerate oxidoreductase, catalytic domain Rfer_2799 pyruvate IPR019752 - Pyruvate/ketoisovalerate oxidoreductase, catalytic domain Rfer_2799 oxidoreductase IPR019752 - Pyruvate/ketoisovalerate oxidoreductase, catalytic domain Rfer_2801 dioxygenase IPR029068 - Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Rfer_2801 resistance IPR029068 - Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Rfer_2802 fold IPR011761 - ATP-grasp fold Rfer_2802 subdomain IPR013816 - ATP-grasp fold, subdomain 2 Rfer_2802 fold IPR013816 - ATP-grasp fold, subdomain 2 Rfer_2804 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2804 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2804 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2804 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2805 (vitamin IPR006158 - Cobalamin (vitamin B12)-binding domain Rfer_2805 cobalamin IPR006158 - Cobalamin (vitamin B12)-binding domain Rfer_2805 (vitamin IPR016176 - Cobalamin (vitamin B12)-dependent enzyme, catalytic Rfer_2805 cobalamin IPR016176 - Cobalamin (vitamin B12)-dependent enzyme, catalytic Rfer_2805 catalytic IPR016176 - Cobalamin (vitamin B12)-dependent enzyme, catalytic Rfer_2805 enzyme IPR016176 - Cobalamin (vitamin B12)-dependent enzyme, catalytic Rfer_2806 c-terminal IPR008920 - Transcription regulator FadR/GntR, C-terminal Rfer_2806 transcription IPR008920 - Transcription regulator FadR/GntR, C-terminal Rfer_2806 regulator IPR008920 - Transcription regulator FadR/GntR, C-terminal Rfer_2806 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_2810 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_2810 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_2810 binding IPR028082 - Periplasmic binding protein-like I Rfer_2811 dehydrogenase IPR016161 - Aldehyde/histidinol dehydrogenase Rfer_2814 barrel IPR013785 - Aldolase-type TIM barrel Rfer_2815 fold IPR011761 - ATP-grasp fold Rfer_2815 subdomain IPR013816 - ATP-grasp fold, subdomain 2 Rfer_2815 fold IPR013816 - ATP-grasp fold, subdomain 2 Rfer_2817 dehydrogenase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_2817 acyl-coa IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_2817 oxidase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_2817 c-terminal IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_2817 dehydrogenase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_2817 oxidase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_2817 acyl-coa IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_2820 dna-binding IPR009061 - DNA binding domain, putative Rfer_2820 putative IPR009061 - DNA binding domain, putative Rfer_2824 transporter IPR003370 - Chromate transporter Rfer_2826 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2826 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2826 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2826 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_2827 ribonuclease IPR012337 - Ribonuclease H-like domain Rfer_2828 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_2829 subfamily IPR006439 - HAD hydrolase, subfamily IA Rfer_2829 hydrolase IPR006439 - HAD hydrolase, subfamily IA Rfer_2829 phosphatase IPR023198 - Phosphoglycolate phosphatase, domain 2 Rfer_2830 dna IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_2830 catalytic IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_2830 core IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_2830 enzyme IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_2830 catalytic IPR013762 - Integrase-like, catalytic core Rfer_2837 phage IPR024455 - Phage capsid Rfer_2837 capsid IPR024455 - Phage capsid Rfer_2842 phosphodiesterase IPR009097 - RNA ligase/cyclic nucleotide phosphodiesterase Rfer_2842 rna IPR009097 - RNA ligase/cyclic nucleotide phosphodiesterase Rfer_2842 ligase IPR009097 - RNA ligase/cyclic nucleotide phosphodiesterase Rfer_2842 nucleotide IPR009097 - RNA ligase/cyclic nucleotide phosphodiesterase Rfer_2844 synthetase IPR004536 - Selenide water dikinase Rfer_2844 c-terminal IPR010918 - AIR synthase-related protein, C-terminal domain Rfer_2845 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_2845 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_2846 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_2846 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_2846 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_2846 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_2848 factor IPR003749 - ThiamineS/Molybdopterin converting factor subunit 1 Rfer_2848 molybdopterin IPR003749 - ThiamineS/Molybdopterin converting factor subunit 1 Rfer_2849 oxidoreductase IPR000103 - Pyridine nucleotide-disulphide oxidoreductase, class-II Rfer_2850 c-terminal IPR001203 - Aldehyde ferredoxin oxidoreductase, C-terminal Rfer_2850 oxidoreductase IPR001203 - Aldehyde ferredoxin oxidoreductase, C-terminal Rfer_2853 cytochrome IPR010980 - Cytochrome c/b562 Rfer_2854 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2854 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2854 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2854 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2855 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2855 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2855 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2855 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2855 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2855 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2855 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2855 periplasmic IPR029151 - Periplasmic sensor domain-like Rfer_2855 domain-like IPR029151 - Periplasmic sensor domain-like Rfer_2856 domain-like IPR029016 - GAF domain-like Rfer_2857 binding IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_2857 c-terminal IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_2857 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_2859 abc IPR000515 - MetI-like domain Rfer_2859 transmembrane IPR000515 - MetI-like domain Rfer_2859 transporter IPR000515 - MetI-like domain Rfer_2860 abc IPR003439 - ABC transporter-like Rfer_2860 binding IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_2860 c-terminal IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_2860 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2860 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2860 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2860 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2862 transport IPR011606 - Branched-chain amino acid transport, permease Rfer_2862 amino IPR011606 - Branched-chain amino acid transport, permease Rfer_2862 permease IPR011606 - Branched-chain amino acid transport, permease Rfer_2862 acid IPR011606 - Branched-chain amino acid transport, permease Rfer_2864 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2864 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2864 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2864 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2866 dehydrogenase IPR016161 - Aldehyde/histidinol dehydrogenase Rfer_2868 abc IPR003439 - ABC transporter-like Rfer_2868 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2868 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2868 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2868 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2869 abc IPR000515 - MetI-like domain Rfer_2869 transmembrane IPR000515 - MetI-like domain Rfer_2869 transporter IPR000515 - MetI-like domain Rfer_2870 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_2873 transporter IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_2873 receptor IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_2873 solute IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_2874 transporter IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_2874 receptor IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_2874 solute IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_2875 c-terminal IPR009014 - Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Rfer_2875 oxidoreductase IPR009014 - Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Rfer_2876 synthetase IPR000092 - Polyprenyl synthetase Rfer_2876 synthase IPR008949 - Terpenoid synthase Rfer_2881 cytochrome IPR011031 - Multihaem cytochrome Rfer_2884 hypothetical IPR004792 - Conserved hypothetical protein CHP00275, flavoprotein HI0933-like Rfer_2884 flavoprotein IPR004792 - Conserved hypothetical protein CHP00275, flavoprotein HI0933-like Rfer_2884 conserved IPR004792 - Conserved hypothetical protein CHP00275, flavoprotein HI0933-like Rfer_2890 serine IPR005881 - Serine O-acetyltransferase Rfer_2891 alpha IPR029028 - Alpha/beta knot methyltransferases Rfer_2891 beta IPR029028 - Alpha/beta knot methyltransferases Rfer_2893 cyclase IPR029787 - Nucleotide cyclase Rfer_2893 nucleotide IPR029787 - Nucleotide cyclase Rfer_2894 cytochrome IPR009056 - Cytochrome c-like domain Rfer_2894 c-like IPR009056 - Cytochrome c-like domain Rfer_2895 hypothetical IPR004792 - Conserved hypothetical protein CHP00275, flavoprotein HI0933-like Rfer_2895 flavoprotein IPR004792 - Conserved hypothetical protein CHP00275, flavoprotein HI0933-like Rfer_2895 conserved IPR004792 - Conserved hypothetical protein CHP00275, flavoprotein HI0933-like Rfer_2896 dna IPR000212 - DNA helicase, UvrD/REP type Rfer_2896 helicase IPR000212 - DNA helicase, UvrD/REP type Rfer_2896 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2896 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2896 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2896 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2897 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2897 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2897 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2897 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2898 fold IPR012336 - Thioredoxin-like fold Rfer_2899 alpha IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Rfer_2899 atpase IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Rfer_2899 beta IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Rfer_2899 complex IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Rfer_2899 shock IPR011129 - Cold shock protein Rfer_2899 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2899 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2899 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2899 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2900 ribosomal IPR002150 - Ribosomal protein L31 Rfer_2902 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2902 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2902 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2902 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2905 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2905 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2905 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2905 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2907 finger IPR013088 - Zinc finger, NHR/GATA-type Rfer_2907 zinc IPR013088 - Zinc finger, NHR/GATA-type Rfer_2908 hydrolase IPR015797 - NUDIX hydrolase domain-like Rfer_2908 domain-like IPR015797 - NUDIX hydrolase domain-like Rfer_2909 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2909 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2909 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2909 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2911 translocase IPR000185 - Protein translocase subunit SecA Rfer_2911 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2911 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2911 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2911 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2916 ornithine IPR000183 - Ornithine/DAP/Arg decarboxylase Rfer_2916 decarboxylase IPR000183 - Ornithine/DAP/Arg decarboxylase Rfer_2916 c-terminal IPR009006 - Alanine racemase/group IV decarboxylase, C-terminal Rfer_2916 decarboxylase IPR009006 - Alanine racemase/group IV decarboxylase, C-terminal Rfer_2916 barrel IPR029066 - PLP-binding barrel Rfer_2921 translation IPR014717 - Translation elongation factor EF1B/ribosomal protein S6 Rfer_2921 elongation IPR014717 - Translation elongation factor EF1B/ribosomal protein S6 Rfer_2921 ribosomal IPR014717 - Translation elongation factor EF1B/ribosomal protein S6 Rfer_2921 factor IPR014717 - Translation elongation factor EF1B/ribosomal protein S6 Rfer_2922 assembly IPR007446 - Pilus assembly protein PilP Rfer_2923 secretion IPR004846 - Type II/III secretion system Rfer_2925 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2925 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2925 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2925 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2928 phosphate IPR013792 - RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Rfer_2928 rna IPR013792 - RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Rfer_2928 alpha IPR013792 - RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Rfer_2928 cyclase IPR013792 - RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Rfer_2928 beta IPR013792 - RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Rfer_2928 transferase IPR013792 - RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Rfer_2930 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_2933 alpha IPR002489 - Glutamate synthase, alpha subunit, C-terminal Rfer_2933 synthase IPR002489 - Glutamate synthase, alpha subunit, C-terminal Rfer_2933 glutamate IPR002489 - Glutamate synthase, alpha subunit, C-terminal Rfer_2933 c-terminal IPR002489 - Glutamate synthase, alpha subunit, C-terminal Rfer_2933 barrel IPR013785 - Aldolase-type TIM barrel Rfer_2935 abc IPR003439 - ABC transporter-like Rfer_2935 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2935 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2935 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2935 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2941 abc IPR003439 - ABC transporter-like Rfer_2941 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2941 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2941 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2941 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2942 transporter IPR000412 - ABC-2 transporter Rfer_2944 phosphate IPR013792 - RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Rfer_2944 rna IPR013792 - RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Rfer_2944 alpha IPR013792 - RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Rfer_2944 cyclase IPR013792 - RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Rfer_2944 beta IPR013792 - RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Rfer_2944 transferase IPR013792 - RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Rfer_2945 phosphoribosyltransferase IPR001348 - ATP phosphoribosyltransferase HisG Rfer_2945 atp IPR001348 - ATP phosphoribosyltransferase HisG Rfer_2946 dehydrogenase IPR012131 - Histidinol dehydrogenase Rfer_2946 dehydrogenase IPR016161 - Aldehyde/histidinol dehydrogenase Rfer_2947 aminotransferase IPR005861 - Histidinol-phosphate aminotransferase family Rfer_2947 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_2948 fold IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_2948 ribosomal IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_2950 histidine IPR006062 - Histidine biosynthesis Rfer_2950 biosynthesis IPR006062 - Histidine biosynthesis Rfer_2950 barrel IPR013785 - Aldolase-type TIM barrel Rfer_2950 isomerase IPR023016 - Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Rfer_2951 histidine IPR006062 - Histidine biosynthesis Rfer_2951 biosynthesis IPR006062 - Histidine biosynthesis Rfer_2951 barrel IPR013785 - Aldolase-type TIM barrel Rfer_2955 histidine IPR001310 - Histidine triad (HIT) protein Rfer_2956 translocase IPR003369 - Sec-independent protein translocase protein TatA/B/E Rfer_2957 translocase IPR003369 - Sec-independent protein translocase protein TatA/B/E Rfer_2958 translocase IPR002033 - Sec-independent periplasmic protein translocase TatC Rfer_2958 periplasmic IPR002033 - Sec-independent periplasmic protein translocase TatC Rfer_2959 peptidase IPR001940 - Peptidase S1C Rfer_2959 peptidase IPR009003 - Trypsin-like cysteine/serine peptidase domain Rfer_2965 transmembrane IPR016174 - Di-haem cytochrome, transmembrane Rfer_2965 cytochrome IPR016174 - Di-haem cytochrome, transmembrane Rfer_2966 cytochrome IPR002326 - Cytochrome c1 Rfer_2966 cytochrome IPR009056 - Cytochrome c-like domain Rfer_2966 c-like IPR009056 - Cytochrome c-like domain Rfer_2967 c-terminal-like IPR010987 - Glutathione S-transferase, C-terminal-like Rfer_2967 fold IPR012336 - Thioredoxin-like fold Rfer_2970 abc IPR000515 - MetI-like domain Rfer_2970 transmembrane IPR000515 - MetI-like domain Rfer_2970 transporter IPR000515 - MetI-like domain Rfer_2971 abc IPR003439 - ABC transporter-like Rfer_2971 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2971 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2971 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2971 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2971 amino IPR030679 - Rfer_2971|Rfer_2971|REF_jgi:Rfer_2971|GeneID:3960602 Rfer_2971 component IPR030679 - Rfer_2971|Rfer_2971|REF_jgi:Rfer_2971|GeneID:3960602 Rfer_2971 transport IPR030679 - Rfer_2971|Rfer_2971|REF_jgi:Rfer_2971|GeneID:3960602 Rfer_2971 atpase IPR030679 - Rfer_2971|Rfer_2971|REF_jgi:Rfer_2971|GeneID:3960602 Rfer_2971 acid IPR030679 - Rfer_2971|Rfer_2971|REF_jgi:Rfer_2971|GeneID:3960602 Rfer_2972 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_2972 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_2972 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_2972 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_2974 phosphate IPR002505 - Phosphate acetyl/butaryl transferase Rfer_2974 transferase IPR002505 - Phosphate acetyl/butaryl transferase Rfer_2975 kinase IPR000890 - Aliphatic acid kinase, short-chain Rfer_2975 acid IPR000890 - Aliphatic acid kinase, short-chain Rfer_2976 pseudouridine IPR020103 - Pseudouridine synthase, catalytic domain Rfer_2976 synthase IPR020103 - Pseudouridine synthase, catalytic domain Rfer_2976 catalytic IPR020103 - Pseudouridine synthase, catalytic domain Rfer_2979 synthetase IPR014746 - Glutamine synthetase/guanido kinase, catalytic domain Rfer_2979 catalytic IPR014746 - Glutamine synthetase/guanido kinase, catalytic domain Rfer_2979 kinase IPR014746 - Glutamine synthetase/guanido kinase, catalytic domain Rfer_2981 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2981 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2981 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2981 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_2981 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2981 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2981 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_2982 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2982 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2982 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2982 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_2983 endonuclease IPR005135 - Endonuclease/exonuclease/phosphatase Rfer_2983 phosphatase IPR005135 - Endonuclease/exonuclease/phosphatase Rfer_2989 c-terminal IPR016164 - FAD-linked oxidase-like, C-terminal Rfer_2991 virulence IPR017039 - Virulence factor BrkB Rfer_2991 factor IPR017039 - Virulence factor BrkB Rfer_2994 peptidase IPR006197 - Peptidase S24, LexA-like Rfer_2994 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_2998 glycosyl IPR002201 - Glycosyl transferase, family 9 Rfer_2998 transferase IPR002201 - Glycosyl transferase, family 9 Rfer_3000 glycosylase IPR011257 - DNA glycosylase Rfer_3000 dna IPR011257 - DNA glycosylase Rfer_3001 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3003 uncharacterised IPR010195 - Uncharacterised peroxidase-related Rfer_3005 chaperone IPR008978 - HSP20-like chaperone Rfer_3006 fold IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_3006 ribosomal IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_3006 protease IPR027065 - Lon protease Rfer_3006 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3006 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3006 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3006 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3011 c-terminal IPR000788 - Ribonucleotide reductase large subunit, C-terminal Rfer_3011 reductase IPR000788 - Ribonucleotide reductase large subunit, C-terminal Rfer_3011 large IPR000788 - Ribonucleotide reductase large subunit, C-terminal Rfer_3012 cyclase IPR029787 - Nucleotide cyclase Rfer_3012 nucleotide IPR029787 - Nucleotide cyclase Rfer_3013 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_3015 transcription IPR028978 - Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain Rfer_3017 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_3017 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_3019 cleavage IPR027266 - GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 Rfer_3019 glycine IPR027266 - GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 Rfer_3019 c-terminal IPR029043 - Glycine cleavage T-protein/YgfZ, C-terminal domain Rfer_3019 glycine IPR029043 - Glycine cleavage T-protein/YgfZ, C-terminal domain Rfer_3019 cleavage IPR029043 - Glycine cleavage T-protein/YgfZ, C-terminal domain Rfer_3021 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_3021 cleavage IPR020581 - Glycine cleavage system P protein Rfer_3021 glycine IPR020581 - Glycine cleavage system P protein Rfer_3022 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_3022 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_3022 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_3022 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_3024 synthase IPR001269 - tRNA-dihydrouridine synthase Rfer_3024 barrel IPR013785 - Aldolase-type TIM barrel Rfer_3025 fold IPR014710 - RmlC-like jelly roll fold Rfer_3027 phosphatase-like IPR029052 - Metallo-dependent phosphatase-like Rfer_3028 helicase IPR014001 - Helicase, superfamily 1/2, ATP-binding domain Rfer_3028 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3028 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3028 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3028 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3033 kinase-like IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_3033 pyruvate IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_3034 ligase IPR003721 - Pantoate-beta-alanine ligase Rfer_3034 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_3034 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_3034 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_3034 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_3035 dna IPR000212 - DNA helicase, UvrD/REP type Rfer_3035 helicase IPR000212 - DNA helicase, UvrD/REP type Rfer_3035 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3035 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3035 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3035 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3037 barrel IPR013785 - Aldolase-type TIM barrel Rfer_3038 domain-like IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_3038 dehydrogenase IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_3038 c-terminal IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_3038 6-phosphogluconate IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_3038 dehydrogenase IPR013328 - Dehydrogenase, multihelical Rfer_3038 6-phosphogluconate IPR013328 - Dehydrogenase, multihelical Rfer_3039 dna IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_3039 catalytic IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_3039 core IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_3039 enzyme IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_3039 catalytic IPR013762 - Integrase-like, catalytic core Rfer_3040 endonuclease IPR011335 - Restriction endonuclease type II-like Rfer_3040 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3040 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3040 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3040 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3041 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3041 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3041 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3041 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3042 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3042 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3042 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3042 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3043 phosphatase-like IPR029052 - Metallo-dependent phosphatase-like Rfer_3066 dna-binding IPR010982 - Lambda repressor-like, DNA-binding domain Rfer_3070 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3070 factor IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_3070 polymerase IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_3070 sigma IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_3070 rna IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_3070 rna IPR014284 - RNA polymerase sigma-70 like domain Rfer_3070 polymerase IPR014284 - RNA polymerase sigma-70 like domain Rfer_3071 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3071 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3071 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3071 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3075 endonuclease IPR011335 - Restriction endonuclease type II-like Rfer_3077 methyltransferase IPR001525 - C-5 cytosine methyltransferase Rfer_3077 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_3079 (vitamin IPR006158 - Cobalamin (vitamin B12)-binding domain Rfer_3079 cobalamin IPR006158 - Cobalamin (vitamin B12)-binding domain Rfer_3079 radical IPR007197 - Radical SAM Rfer_3079 radical IPR023970 - Methylthiotransferase/radical SAM-type protein Rfer_3082 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3083 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3083 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3083 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3083 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3083 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3083 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3083 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3087 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3087 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3087 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3087 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3088 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3088 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3088 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3088 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3089 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3089 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3089 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3089 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3091 reductase IPR020945 - DMSO/Nitrate reductase chaperone Rfer_3091 chaperone IPR020945 - DMSO/Nitrate reductase chaperone Rfer_3092 cytochrome IPR011031 - Multihaem cytochrome Rfer_3096 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3096 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3096 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3096 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3096 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3096 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3096 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3097 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3097 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3097 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3097 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3100 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3101 peptidase IPR000246 - Peptidase T2, asparaginase 2 Rfer_3102 abc IPR003439 - ABC transporter-like Rfer_3102 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3102 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3102 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3102 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3103 binding IPR030678 - Rfer_3103|Rfer_3103|REF_jgi:Rfer_3103|GeneID:3962116 Rfer_3103 peptide IPR030678 - Rfer_3103|Rfer_3103|REF_jgi:Rfer_3103|GeneID:3962116 Rfer_3104 abc IPR000515 - MetI-like domain Rfer_3104 transmembrane IPR000515 - MetI-like domain Rfer_3104 transporter IPR000515 - MetI-like domain Rfer_3105 abc IPR000515 - MetI-like domain Rfer_3105 transmembrane IPR000515 - MetI-like domain Rfer_3105 transporter IPR000515 - MetI-like domain Rfer_3107 peptidase IPR007035 - Peptidase M55, D-aminopeptidase Rfer_3112 c-terminal-like IPR010987 - Glutathione S-transferase, C-terminal-like Rfer_3112 fold IPR012336 - Thioredoxin-like fold Rfer_3114 abc IPR000515 - MetI-like domain Rfer_3114 transmembrane IPR000515 - MetI-like domain Rfer_3114 transporter IPR000515 - MetI-like domain Rfer_3115 abc IPR003439 - ABC transporter-like Rfer_3115 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3115 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3115 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3115 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3117 porin IPR023614 - Porin domain Rfer_3120 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3121 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3121 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3121 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3121 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3121 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3121 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3121 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3123 transmembrane IPR016174 - Di-haem cytochrome, transmembrane Rfer_3123 cytochrome IPR016174 - Di-haem cytochrome, transmembrane Rfer_3124 cytochrome IPR009056 - Cytochrome c-like domain Rfer_3124 c-like IPR009056 - Cytochrome c-like domain Rfer_3124 cytochrome IPR026259 - Di-c-type haem protein, MauG/cytochrome c peroxidase Rfer_3124 haem IPR026259 - Di-c-type haem protein, MauG/cytochrome c peroxidase Rfer_3124 peroxidase IPR026259 - Di-c-type haem protein, MauG/cytochrome c peroxidase Rfer_3127 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3127 domain-like IPR029016 - GAF domain-like Rfer_3128 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_3128 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_3129 abc IPR003439 - ABC transporter-like Rfer_3129 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3129 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3129 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3129 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3130 transporter IPR001851 - ABC transporter, permease Rfer_3130 abc IPR001851 - ABC transporter, permease Rfer_3130 permease IPR001851 - ABC transporter, permease Rfer_3131 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_3131 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_3131 binding IPR028082 - Periplasmic binding protein-like I Rfer_3132 porin IPR023614 - Porin domain Rfer_3134 enzyme IPR001354 - Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase Rfer_3134 domain-like IPR029017 - Enolase N-terminal domain-like Rfer_3134 domain-like IPR029065 - Enolase C-terminal domain-like Rfer_3134 c-terminal IPR029065 - Enolase C-terminal domain-like Rfer_3136 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_3136 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_3138 barrel IPR011008 - Dimeric alpha-beta barrel Rfer_3140 transcriptional IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_3140 c-terminal IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_3140 regulator IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_3141 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_3141 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_3143 acyl-coa IPR016181 - Acyl-CoA N-acyltransferase Rfer_3144 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3144 factor IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_3144 polymerase IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_3144 sigma IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_3144 rna IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_3144 rna IPR014284 - RNA polymerase sigma-70 like domain Rfer_3144 polymerase IPR014284 - RNA polymerase sigma-70 like domain Rfer_3146 fold IPR014710 - RmlC-like jelly roll fold Rfer_3147 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3147 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3147 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3147 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3148 rna IPR006110 - RNA polymerase, subunit omega/K/RPB6 Rfer_3148 polymerase IPR006110 - RNA polymerase, subunit omega/K/RPB6 Rfer_3150 factor IPR023459 - Transcription elongation factor GreA/GreB family Rfer_3150 elongation IPR023459 - Transcription elongation factor GreA/GreB family Rfer_3150 transcription IPR023459 - Transcription elongation factor GreA/GreB family Rfer_3154 transport IPR003400 - Biopolymer transport protein ExbD/TolR Rfer_3155 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3155 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3155 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3155 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3158 kinase IPR000850 - Adenylate kinase/UMP-CMP kinase Rfer_3158 kinase IPR000850 - Adenylate kinase/UMP-CMP kinase Rfer_3158 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3158 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3158 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3158 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3159 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_3159 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_3159 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_3159 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_3160 enzyme IPR000277 - Cys/Met metabolism, pyridoxal phosphate-dependent enzyme Rfer_3160 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_3164 transporter IPR001851 - ABC transporter, permease Rfer_3164 abc IPR001851 - ABC transporter, permease Rfer_3164 permease IPR001851 - ABC transporter, permease Rfer_3165 transporter IPR001851 - ABC transporter, permease Rfer_3165 abc IPR001851 - ABC transporter, permease Rfer_3165 permease IPR001851 - ABC transporter, permease Rfer_3166 abc IPR003439 - ABC transporter-like Rfer_3166 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3166 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3166 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3166 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3168 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3168 fold IPR014710 - RmlC-like jelly roll fold Rfer_3169 abc IPR003439 - ABC transporter-like Rfer_3169 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3169 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3169 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3169 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3170 abc IPR003439 - ABC transporter-like Rfer_3170 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3170 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3170 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3170 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3171 transporter IPR001851 - ABC transporter, permease Rfer_3171 abc IPR001851 - ABC transporter, permease Rfer_3171 permease IPR001851 - ABC transporter, permease Rfer_3172 transporter IPR001851 - ABC transporter, permease Rfer_3172 abc IPR001851 - ABC transporter, permease Rfer_3172 permease IPR001851 - ABC transporter, permease Rfer_3176 complex IPR008921 - DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Rfer_3176 gamma IPR008921 - DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Rfer_3176 c-terminal IPR008921 - DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Rfer_3176 dna IPR008921 - DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Rfer_3176 delta IPR008921 - DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Rfer_3176 polymerase IPR008921 - DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Rfer_3176 delta IPR008921 - DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Rfer_3176 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3176 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3176 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3176 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3177 carrier IPR004564 - Outer membrane lipoprotein carrier protein LolA-like Rfer_3177 membrane IPR004564 - Outer membrane lipoprotein carrier protein LolA-like Rfer_3177 lipoprotein IPR004564 - Outer membrane lipoprotein carrier protein LolA-like Rfer_3177 outer IPR004564 - Outer membrane lipoprotein carrier protein LolA-like Rfer_3178 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3178 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3178 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3178 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3179 oxidoreductase IPR000103 - Pyridine nucleotide-disulphide oxidoreductase, class-II Rfer_3181 ribosomal IPR011332 - Zinc-binding ribosomal protein Rfer_3183 rna IPR023267 - RNA (C5-cytosine) methyltransferase Rfer_3183 methyltransferase IPR023267 - RNA (C5-cytosine) methyltransferase Rfer_3183 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_3184 outer IPR003423 - Outer membrane efflux protein Rfer_3184 efflux IPR003423 - Outer membrane efflux protein Rfer_3184 membrane IPR003423 - Outer membrane efflux protein Rfer_3185 membrane IPR006143 - RND efflux pump, membrane fusion protein Rfer_3185 pump IPR006143 - RND efflux pump, membrane fusion protein Rfer_3185 efflux IPR006143 - RND efflux pump, membrane fusion protein Rfer_3186 abc IPR003439 - ABC transporter-like Rfer_3186 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3186 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3186 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3186 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3188 biosynthesis IPR004960 - Bacterial lipid A biosynthesis acyltransferase Rfer_3188 lipid IPR004960 - Bacterial lipid A biosynthesis acyltransferase Rfer_3188 bacterial IPR004960 - Bacterial lipid A biosynthesis acyltransferase Rfer_3189 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_3189 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_3189 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_3189 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_3190 binding IPR006073 - GTP binding domain Rfer_3190 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3190 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3190 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3190 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3191 cytochrome IPR009056 - Cytochrome c-like domain Rfer_3191 c-like IPR009056 - Cytochrome c-like domain Rfer_3192 cyclase IPR029787 - Nucleotide cyclase Rfer_3192 nucleotide IPR029787 - Nucleotide cyclase Rfer_3195 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_3195 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_3197 cytochrome IPR009056 - Cytochrome c-like domain Rfer_3197 c-like IPR009056 - Cytochrome c-like domain Rfer_3200 factor IPR011050 - Pectin lyase fold/virulence factor Rfer_3200 virulence IPR011050 - Pectin lyase fold/virulence factor Rfer_3200 lyase IPR011050 - Pectin lyase fold/virulence factor Rfer_3200 fold IPR011050 - Pectin lyase fold/virulence factor Rfer_3201 abc IPR003439 - ABC transporter-like Rfer_3201 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3201 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3201 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3201 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3208 oxidoreductase IPR001433 - Oxidoreductase FAD/NAD(P)-binding Rfer_3208 beta-barrel IPR017938 - Riboflavin synthase-like beta-barrel Rfer_3208 synthase-like IPR017938 - Riboflavin synthase-like beta-barrel Rfer_3209 c-terminal IPR009014 - Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Rfer_3209 oxidoreductase IPR009014 - Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Rfer_3209 enzyme IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_3209 thiamine IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_3209 c-terminal IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_3209 catalytic IPR019752 - Pyruvate/ketoisovalerate oxidoreductase, catalytic domain Rfer_3209 pyruvate IPR019752 - Pyruvate/ketoisovalerate oxidoreductase, catalytic domain Rfer_3209 oxidoreductase IPR019752 - Pyruvate/ketoisovalerate oxidoreductase, catalytic domain Rfer_3214 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3214 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3214 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3214 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3215 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_3217 acyl-coa IPR016181 - Acyl-CoA N-acyltransferase Rfer_3220 acyl-coa IPR016181 - Acyl-CoA N-acyltransferase Rfer_3223 abc IPR003439 - ABC transporter-like Rfer_3223 binding IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_3223 c-terminal IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_3223 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3223 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3223 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3223 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3224 abc IPR000515 - MetI-like domain Rfer_3224 transmembrane IPR000515 - MetI-like domain Rfer_3224 transporter IPR000515 - MetI-like domain Rfer_3225 abc IPR000515 - MetI-like domain Rfer_3225 transmembrane IPR000515 - MetI-like domain Rfer_3225 transporter IPR000515 - MetI-like domain Rfer_3226 ornithine IPR003462 - Ornithine cyclodeaminase/mu-crystallin Rfer_3227 dna-binding IPR010982 - Lambda repressor-like, DNA-binding domain Rfer_3227 fold IPR014710 - RmlC-like jelly roll fold Rfer_3228 dehydrogenase IPR016161 - Aldehyde/histidinol dehydrogenase Rfer_3230 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_3230 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_3230 binding IPR028082 - Periplasmic binding protein-like I Rfer_3231 abc IPR003439 - ABC transporter-like Rfer_3231 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3231 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3231 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3231 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3232 transmembrane IPR011925 - Lipoprotein releasing system, transmembrane protein, LolC/E family Rfer_3235 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_3235 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3235 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3235 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3235 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3236 phosphatase-like IPR016195 - Polymerase/histidinol phosphatase-like Rfer_3236 polymerase IPR016195 - Polymerase/histidinol phosphatase-like Rfer_3238 alpha IPR017945 - DHBP synthase RibB-like alpha/beta domain Rfer_3238 beta IPR017945 - DHBP synthase RibB-like alpha/beta domain Rfer_3238 synthase IPR017945 - DHBP synthase RibB-like alpha/beta domain Rfer_3240 synthetase IPR002305 - Aminoacyl-tRNA synthetase, class Ic Rfer_3240 aminoacyl-trna IPR002305 - Aminoacyl-tRNA synthetase, class Ic Rfer_3240 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_3240 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_3240 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_3240 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_3241 periplasmic IPR029151 - Periplasmic sensor domain-like Rfer_3241 domain-like IPR029151 - Periplasmic sensor domain-like Rfer_3241 cyclase IPR029787 - Nucleotide cyclase Rfer_3241 nucleotide IPR029787 - Nucleotide cyclase Rfer_3243 aminoacyl-trna IPR006195 - Aminoacyl-tRNA synthetase, class II Rfer_3243 synthetase IPR006195 - Aminoacyl-tRNA synthetase, class II Rfer_3244 abc IPR003439 - ABC transporter-like Rfer_3244 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3244 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3244 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3244 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3245 abc IPR000515 - MetI-like domain Rfer_3245 transmembrane IPR000515 - MetI-like domain Rfer_3245 transporter IPR000515 - MetI-like domain Rfer_3246 binding IPR005948 - Thiamine ABC transporter periplasmic binding protein Rfer_3246 periplasmic IPR005948 - Thiamine ABC transporter periplasmic binding protein Rfer_3246 thiamine IPR005948 - Thiamine ABC transporter periplasmic binding protein Rfer_3246 abc IPR005948 - Thiamine ABC transporter periplasmic binding protein Rfer_3246 transporter IPR005948 - Thiamine ABC transporter periplasmic binding protein Rfer_3247 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3247 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3247 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3247 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3250 cyclase IPR029787 - Nucleotide cyclase Rfer_3250 nucleotide IPR029787 - Nucleotide cyclase Rfer_3258 transmembrane IPR016174 - Di-haem cytochrome, transmembrane Rfer_3258 cytochrome IPR016174 - Di-haem cytochrome, transmembrane Rfer_3263 reductase IPR020945 - DMSO/Nitrate reductase chaperone Rfer_3263 chaperone IPR020945 - DMSO/Nitrate reductase chaperone Rfer_3267 c-terminal-like IPR010987 - Glutathione S-transferase, C-terminal-like Rfer_3267 fold IPR012336 - Thioredoxin-like fold Rfer_3268 peptidase IPR005320 - Peptidase S51 Rfer_3270 fold IPR012336 - Thioredoxin-like fold Rfer_3272 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3272 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3272 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3272 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3273 acyl IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_3273 acyl IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_3273 hydrolase IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_3273 transferase IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_3275 aminoacyl-trna IPR009080 - Aminoacyl-tRNA synthetase, class 1a, anticodon-binding Rfer_3275 synthetase IPR009080 - Aminoacyl-tRNA synthetase, class 1a, anticodon-binding Rfer_3275 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_3275 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_3275 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_3275 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_3275 synthetase IPR014758 - Methionyl-tRNA synthetase Rfer_3276 oxidoreductase IPR003918 - NADH:ubiquinone oxidoreductase Rfer_3282 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3284 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_3284 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_3285 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_3285 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_3289 oxidoreductase IPR003918 - NADH:ubiquinone oxidoreductase Rfer_3292 oxidoreductase IPR003918 - NADH:ubiquinone oxidoreductase Rfer_3293 triphosphate IPR008180 - Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase Rfer_3293 deaminase IPR008180 - Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase Rfer_3293 triphosphate IPR008180 - Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase Rfer_3297 deaminase IPR006330 - Adenosine/adenine deaminase Rfer_3299 hydroxylase IPR001221 - Phenol hydroxylase reductase Rfer_3299 reductase IPR001221 - Phenol hydroxylase reductase Rfer_3299 oxidoreductase IPR001433 - Oxidoreductase FAD/NAD(P)-binding Rfer_3299 beta-barrel IPR017938 - Riboflavin synthase-like beta-barrel Rfer_3299 synthase-like IPR017938 - Riboflavin synthase-like beta-barrel Rfer_3302 modification IPR003442 - tRNA threonylcarbamoyl adenosine modification protein TsaE Rfer_3302 trna IPR003442 - tRNA threonylcarbamoyl adenosine modification protein TsaE Rfer_3302 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3302 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3302 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3302 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3306 iron IPR004923 - Iron permease FTR1/Fip1/EfeU Rfer_3306 permease IPR004923 - Iron permease FTR1/Fip1/EfeU Rfer_3308 dna IPR002099 - DNA mismatch repair protein family Rfer_3308 repair IPR002099 - DNA mismatch repair protein family Rfer_3308 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3308 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3308 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3308 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3308 fold IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_3308 ribosomal IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_3312 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_3312 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_3313 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_3313 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_3313 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_3313 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_3314 aminotransferase IPR001544 - Aminotransferase, class IV Rfer_3314 synthase IPR019999 - Anthranilate synthase component I - like Rfer_3314 component IPR019999 - Anthranilate synthase component I - like Rfer_3315 fold IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_3315 ribosomal IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_3315 protease IPR027065 - Lon protease Rfer_3315 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3315 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3315 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3315 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3321 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3321 factor IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_3321 polymerase IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_3321 sigma IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_3321 rna IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_3321 rna IPR014284 - RNA polymerase sigma-70 like domain Rfer_3321 polymerase IPR014284 - RNA polymerase sigma-70 like domain Rfer_3322 enzyme IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_3322 thiamine IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_3322 c-terminal IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_3322 enzyme IPR012001 - Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Rfer_3322 thiamine IPR012001 - Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Rfer_3324 domain-like IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_3324 dehydrogenase IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_3324 c-terminal IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_3324 6-phosphogluconate IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_3324 dehydrogenase IPR013328 - Dehydrogenase, multihelical Rfer_3324 6-phosphogluconate IPR013328 - Dehydrogenase, multihelical Rfer_3326 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3326 fold IPR014710 - RmlC-like jelly roll fold Rfer_3327 kinase-like IPR011009 - Protein kinase-like domain Rfer_3328 dehydrogenase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_3328 acyl-coa IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_3328 oxidase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_3328 c-terminal IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_3328 dehydrogenase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_3328 oxidase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_3328 acyl-coa IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_3330 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_3331 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3331 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3331 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3331 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3332 secretion IPR004846 - Type II/III secretion system Rfer_3337 lectin IPR013320 - Concanavalin A-like lectin/glucanase, subgroup Rfer_3342 recognition IPR022941 - Signal recognition particle, SRP54 subunit Rfer_3342 signal IPR022941 - Signal recognition particle, SRP54 subunit Rfer_3342 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3342 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3342 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3342 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3344 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3344 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3344 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3344 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3345 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3345 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3345 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3345 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3346 amidase IPR002502 - N-acetylmuramoyl-L-alanine amidase domain Rfer_3347 c-terminal IPR000788 - Ribonucleotide reductase large subunit, C-terminal Rfer_3347 reductase IPR000788 - Ribonucleotide reductase large subunit, C-terminal Rfer_3347 large IPR000788 - Ribonucleotide reductase large subunit, C-terminal Rfer_3348 small IPR000358 - Ribonucleotide reductase small subunit Rfer_3348 reductase IPR000358 - Ribonucleotide reductase small subunit Rfer_3351 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_3352 fold IPR011761 - ATP-grasp fold Rfer_3352 subdomain IPR013816 - ATP-grasp fold, subdomain 2 Rfer_3352 fold IPR013816 - ATP-grasp fold, subdomain 2 Rfer_3354 fold IPR012336 - Thioredoxin-like fold Rfer_3358 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_3358 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_3358 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_3358 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_3360 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3360 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3360 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3360 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3365 radical IPR007197 - Radical SAM Rfer_3365 radical IPR023970 - Methylthiotransferase/radical SAM-type protein Rfer_3367 barrel IPR013785 - Aldolase-type TIM barrel Rfer_3370 cyclase IPR029787 - Nucleotide cyclase Rfer_3370 nucleotide IPR029787 - Nucleotide cyclase Rfer_3371 cell IPR001182 - Cell cycle protein FtsW/RodA Rfer_3372 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3372 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3372 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3372 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3373 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3375 esterase IPR008886 - Uncharacterised protein family UPF0227/Esterase YqiA Rfer_3375 uncharacterised IPR008886 - Uncharacterised protein family UPF0227/Esterase YqiA Rfer_3375 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_3375 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_3375 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_3375 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_3377 abc IPR003439 - ABC transporter-like Rfer_3377 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3377 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3377 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3377 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3378 abc IPR003439 - ABC transporter-like Rfer_3378 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3378 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3378 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3378 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3379 transporter IPR001851 - ABC transporter, permease Rfer_3379 abc IPR001851 - ABC transporter, permease Rfer_3379 permease IPR001851 - ABC transporter, permease Rfer_3380 transporter IPR001851 - ABC transporter, permease Rfer_3380 abc IPR001851 - ABC transporter, permease Rfer_3380 permease IPR001851 - ABC transporter, permease Rfer_3381 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_3381 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_3381 binding IPR028082 - Periplasmic binding protein-like I Rfer_3382 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3382 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3382 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3382 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3383 abc IPR003439 - ABC transporter-like Rfer_3383 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3383 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3383 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3383 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3384 toxin IPR014942 - Protein of unknown function DUF1814 Rfer_3384 transferase IPR014942 - Protein of unknown function DUF1814 Rfer_3385 dna-binding IPR010982 - Lambda repressor-like, DNA-binding domain Rfer_3387 barrel IPR012349 - FMN-binding split barrel Rfer_3388 domain-like IPR015946 - K homology domain-like, alpha/beta Rfer_3388 homology IPR015946 - K homology domain-like, alpha/beta Rfer_3388 beta IPR015946 - K homology domain-like, alpha/beta Rfer_3388 alpha IPR015946 - K homology domain-like, alpha/beta Rfer_3391 domain-like IPR029016 - GAF domain-like Rfer_3392 factor IPR003749 - ThiamineS/Molybdopterin converting factor subunit 1 Rfer_3392 molybdopterin IPR003749 - ThiamineS/Molybdopterin converting factor subunit 1 Rfer_3395 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_3395 cyclase IPR029787 - Nucleotide cyclase Rfer_3395 nucleotide IPR029787 - Nucleotide cyclase Rfer_3397 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3398 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3398 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3398 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3398 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3398 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3398 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3398 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3399 gamma IPR002026 - Urease, gamma/gamma-beta subunit Rfer_3403 acyl-coa IPR016181 - Acyl-CoA N-acyltransferase Rfer_3408 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3408 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3408 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3408 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3409 peptidase IPR000246 - Peptidase T2, asparaginase 2 Rfer_3410 phosphatase IPR017867 - Protein-tyrosine phosphatase, low molecular weight Rfer_3410 protein-tyrosine IPR017867 - Protein-tyrosine phosphatase, low molecular weight Rfer_3413 dehydrogenase IPR022893 - Shikimate, quinate/shikimate dehydrogenase Rfer_3414 fold IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_3414 ribosomal IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_3416 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_3417 ribonuclease IPR012337 - Ribonuclease H-like domain Rfer_3420 c-terminal IPR008280 - Tubulin/FtsZ, C-terminal Rfer_3420 tubulin IPR008280 - Tubulin/FtsZ, C-terminal Rfer_3420 tubulin IPR018316 - Tubulin/FtsZ, 2-layer sandwich domain Rfer_3422 cell IPR005548 - Cell division protein FtsQ/DivIB Rfer_3423 fold IPR011761 - ATP-grasp fold Rfer_3423 subdomain IPR013816 - ATP-grasp fold, subdomain 2 Rfer_3423 fold IPR013816 - ATP-grasp fold, subdomain 2 Rfer_3426 cell IPR001182 - Cell cycle protein FtsW/RodA Rfer_3428 glycosyl IPR000715 - Glycosyl transferase, family 4 Rfer_3428 transferase IPR000715 - Glycosyl transferase, family 4 Rfer_3433 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_3435 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3435 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3435 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3435 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3436 beta IPR001353 - Proteasome, subunit alpha/beta Rfer_3436 alpha IPR001353 - Proteasome, subunit alpha/beta Rfer_3436 proteasome IPR001353 - Proteasome, subunit alpha/beta Rfer_3438 finger IPR000962 - Zinc finger, DksA/TraR C4-type Rfer_3438 zinc IPR000962 - Zinc finger, DksA/TraR C4-type Rfer_3439 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3439 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3439 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3439 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3440 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_3442 dna IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_3442 catalytic IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_3442 core IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_3442 enzyme IPR011010 - DNA breaking-rejoining enzyme, catalytic core Rfer_3442 catalytic IPR013762 - Integrase-like, catalytic core Rfer_3446 hydrolase IPR015797 - NUDIX hydrolase domain-like Rfer_3446 domain-like IPR015797 - NUDIX hydrolase domain-like Rfer_3449 periplasmic IPR029151 - Periplasmic sensor domain-like Rfer_3449 domain-like IPR029151 - Periplasmic sensor domain-like Rfer_3452 transmembrane IPR002549 - Uncharacterised protein family UPF0118 Rfer_3453 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3453 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3453 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3453 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3454 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3454 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3454 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3454 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3454 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3454 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3454 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3454 periplasmic IPR029151 - Periplasmic sensor domain-like Rfer_3454 domain-like IPR029151 - Periplasmic sensor domain-like Rfer_3455 symporter IPR001991 - Sodium:dicarboxylate symporter Rfer_3456 catalytic IPR024079 - Metallopeptidase, catalytic domain Rfer_3456 metallopeptidase IPR024079 - Metallopeptidase, catalytic domain Rfer_3457 pseudouridine IPR020103 - Pseudouridine synthase, catalytic domain Rfer_3457 synthase IPR020103 - Pseudouridine synthase, catalytic domain Rfer_3457 catalytic IPR020103 - Pseudouridine synthase, catalytic domain Rfer_3458 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3459 transcription IPR000944 - Transcription regulator Rrf2-like Rfer_3459 regulator IPR000944 - Transcription regulator Rrf2-like Rfer_3459 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3460 synthase IPR005856 - Cysteine synthase K/M Rfer_3465 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3469 reductase IPR001395 - Aldo/keto reductase Rfer_3469 beta IPR001395 - Aldo/keto reductase Rfer_3469 channel IPR001395 - Aldo/keto reductase Rfer_3469 potassium IPR001395 - Aldo/keto reductase Rfer_3471 cyclase IPR029787 - Nucleotide cyclase Rfer_3471 nucleotide IPR029787 - Nucleotide cyclase Rfer_3475 cyclase IPR029787 - Nucleotide cyclase Rfer_3475 nucleotide IPR029787 - Nucleotide cyclase Rfer_3477 domain-like IPR029060 - PIN domain-like Rfer_3479 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3481 transporter IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_3481 receptor IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_3481 solute IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_3486 beta IPR011206 - Citrate lyase beta subunit-like Rfer_3486 lyase IPR011206 - Citrate lyase beta subunit-like Rfer_3486 kinase-like IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_3486 pyruvate IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_3487 lyase IPR000362 - Fumarate lyase family Rfer_3491 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3493 abc IPR003439 - ABC transporter-like Rfer_3493 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3493 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3493 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3493 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3499 transporter IPR001851 - ABC transporter, permease Rfer_3499 abc IPR001851 - ABC transporter, permease Rfer_3499 permease IPR001851 - ABC transporter, permease Rfer_3500 transporter IPR001851 - ABC transporter, permease Rfer_3500 abc IPR001851 - ABC transporter, permease Rfer_3500 permease IPR001851 - ABC transporter, permease Rfer_3501 abc IPR003439 - ABC transporter-like Rfer_3501 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3501 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3501 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3501 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3502 abc IPR003439 - ABC transporter-like Rfer_3502 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3502 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3502 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3502 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3503 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_3503 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_3504 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_3504 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_3504 binding IPR028082 - Periplasmic binding protein-like I Rfer_3506 dehydrogenase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_3506 acyl-coa IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_3506 oxidase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_3506 c-terminal IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_3506 dehydrogenase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_3506 oxidase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_3506 acyl-coa IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_3507 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_3507 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_3508 transcriptional IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_3508 c-terminal IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_3508 regulator IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_3509 enzyme IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_3509 thiamine IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_3509 c-terminal IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_3509 enzyme IPR012001 - Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Rfer_3509 thiamine IPR012001 - Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Rfer_3511 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3511 fold IPR014710 - RmlC-like jelly roll fold Rfer_3515 methyltransferase IPR004033 - UbiE/COQ5 methyltransferase Rfer_3515 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_3517 domain-like IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_3517 dehydrogenase IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_3517 c-terminal IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_3517 6-phosphogluconate IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_3517 dehydrogenase IPR013328 - Dehydrogenase, multihelical Rfer_3517 6-phosphogluconate IPR013328 - Dehydrogenase, multihelical Rfer_3519 dehydrogenase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_3519 acyl-coa IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_3519 oxidase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_3519 c-terminal IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_3519 dehydrogenase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_3519 oxidase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_3519 acyl-coa IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_3520 transcriptional IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_3520 c-terminal IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_3520 regulator IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_3521 transcriptional IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_3521 c-terminal IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_3521 regulator IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_3522 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3522 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3522 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3522 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3522 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3522 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3522 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3523 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3524 kinase IPR001048 - Aspartate/glutamate/uridylate kinase Rfer_3524 glutamate IPR001048 - Aspartate/glutamate/uridylate kinase Rfer_3524 glutamate IPR001057 - Glutamate/acetylglutamate kinase Rfer_3524 kinase IPR001057 - Glutamate/acetylglutamate kinase Rfer_3526 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_3526 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_3528 acyl IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_3528 acyl IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_3528 hydrolase IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_3528 transferase IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_3529 transcriptional IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_3529 c-terminal IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_3529 regulator IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_3530 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_3536 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_3536 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_3537 abc IPR003439 - ABC transporter-like Rfer_3537 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3537 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3537 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3537 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3538 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_3538 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_3538 binding IPR028082 - Periplasmic binding protein-like I Rfer_3539 transporter IPR001851 - ABC transporter, permease Rfer_3539 abc IPR001851 - ABC transporter, permease Rfer_3539 permease IPR001851 - ABC transporter, permease Rfer_3540 transporter IPR001851 - ABC transporter, permease Rfer_3540 abc IPR001851 - ABC transporter, permease Rfer_3540 permease IPR001851 - ABC transporter, permease Rfer_3541 abc IPR003439 - ABC transporter-like Rfer_3541 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3541 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3541 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3541 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3542 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_3542 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_3543 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3543 fold IPR014710 - RmlC-like jelly roll fold Rfer_3544 pseudouridine IPR020103 - Pseudouridine synthase, catalytic domain Rfer_3544 synthase IPR020103 - Pseudouridine synthase, catalytic domain Rfer_3544 catalytic IPR020103 - Pseudouridine synthase, catalytic domain Rfer_3545 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_3545 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_3545 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_3545 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_3547 cyclase IPR029787 - Nucleotide cyclase Rfer_3547 nucleotide IPR029787 - Nucleotide cyclase Rfer_3548 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3548 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3548 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3548 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3548 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3548 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3548 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3549 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3549 fold IPR014710 - RmlC-like jelly roll fold Rfer_3551 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3551 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3551 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3551 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3551 fold IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_3551 ribosomal IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_3553 c-terminal IPR009014 - Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Rfer_3553 oxidoreductase IPR009014 - Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Rfer_3555 c-terminal-like IPR010987 - Glutathione S-transferase, C-terminal-like Rfer_3555 fold IPR012336 - Thioredoxin-like fold Rfer_3557 transporter IPR000412 - ABC-2 transporter Rfer_3558 abc IPR003439 - ABC transporter-like Rfer_3558 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3558 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3558 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3558 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3559 fold IPR011761 - ATP-grasp fold Rfer_3559 subdomain IPR013816 - ATP-grasp fold, subdomain 2 Rfer_3559 fold IPR013816 - ATP-grasp fold, subdomain 2 Rfer_3567 permease IPR004684 - 2-keto-3-deoxygluconate permease Rfer_3568 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_3569 phosphorylase IPR018017 - Nucleoside phosphorylase Rfer_3569 nucleoside IPR018017 - Nucleoside phosphorylase Rfer_3572 cyclase IPR029787 - Nucleotide cyclase Rfer_3572 nucleotide IPR029787 - Nucleotide cyclase Rfer_3573 fold IPR012336 - Thioredoxin-like fold Rfer_3574 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3574 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3574 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3574 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3574 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3574 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3574 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3575 peptidase IPR000834 - Peptidase M14, carboxypeptidase A Rfer_3577 helicase IPR014001 - Helicase, superfamily 1/2, ATP-binding domain Rfer_3577 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3577 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3577 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3577 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3579 helicase IPR014001 - Helicase, superfamily 1/2, ATP-binding domain Rfer_3579 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3579 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3579 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3579 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3581 synthase IPR001465 - Malate synthase Rfer_3582 subfamily IPR006439 - HAD hydrolase, subfamily IA Rfer_3582 hydrolase IPR006439 - HAD hydrolase, subfamily IA Rfer_3582 phosphatase IPR023198 - Phosphoglycolate phosphatase, domain 2 Rfer_3584 c-terminal IPR008920 - Transcription regulator FadR/GntR, C-terminal Rfer_3584 transcription IPR008920 - Transcription regulator FadR/GntR, C-terminal Rfer_3584 regulator IPR008920 - Transcription regulator FadR/GntR, C-terminal Rfer_3584 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3585 dehydrogenase IPR016161 - Aldehyde/histidinol dehydrogenase Rfer_3586 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_3586 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_3588 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3588 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3588 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3588 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3588 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3588 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3588 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3590 rna IPR023267 - RNA (C5-cytosine) methyltransferase Rfer_3590 methyltransferase IPR023267 - RNA (C5-cytosine) methyltransferase Rfer_3590 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_3592 rna IPR015712 - DNA-directed RNA polymerase, subunit 2 Rfer_3592 dna-directed IPR015712 - DNA-directed RNA polymerase, subunit 2 Rfer_3592 polymerase IPR015712 - DNA-directed RNA polymerase, subunit 2 Rfer_3593 ribosomal IPR000206 - Ribosomal protein L7/L12 Rfer_3593 l12 IPR000206 - Ribosomal protein L7/L12 Rfer_3593 ribosomal IPR014719 - Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Rfer_3593 c-terminal IPR014719 - Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Rfer_3593 adaptor IPR014719 - Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Rfer_3593 l12 IPR014719 - Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Rfer_3594 ribosomal IPR001790 - Ribosomal protein L10/acidic P0 Rfer_3595 biogenesis IPR028364 - Ribosomal protein L1/ribosomal biogenesis protein Rfer_3595 ribosomal IPR028364 - Ribosomal protein L1/ribosomal biogenesis protein Rfer_3595 ribosomal IPR028364 - Ribosomal protein L1/ribosomal biogenesis protein Rfer_3596 l12 IPR000911 - Ribosomal protein L11/L12 Rfer_3596 ribosomal IPR000911 - Ribosomal protein L11/L12 Rfer_3597 translation IPR008991 - Translation protein SH3-like domain Rfer_3597 ribosomal IPR014722 - Ribosomal protein L2 domain 2 Rfer_3598 translocase IPR001901 - Protein translocase complex, SecE/Sec61-gamma subunit Rfer_3598 complex IPR001901 - Protein translocase complex, SecE/Sec61-gamma subunit Rfer_3599 translation IPR009000 - Translation protein, beta-barrel domain Rfer_3599 beta-barrel IPR009000 - Translation protein, beta-barrel domain Rfer_3599 c-terminal IPR009001 - Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Rfer_3599 initiation IPR009001 - Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Rfer_3599 factor IPR009001 - Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Rfer_3599 translation IPR009001 - Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Rfer_3599 factor IPR009001 - Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Rfer_3599 elongation IPR009001 - Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Rfer_3599 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3599 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3599 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3599 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3601 barrel IPR013785 - Aldolase-type TIM barrel Rfer_3604 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_3606 cyclase IPR029787 - Nucleotide cyclase Rfer_3606 nucleotide IPR029787 - Nucleotide cyclase Rfer_3607 synthase IPR019999 - Anthranilate synthase component I - like Rfer_3607 component IPR019999 - Anthranilate synthase component I - like Rfer_3611 subfamily IPR006439 - HAD hydrolase, subfamily IA Rfer_3611 hydrolase IPR006439 - HAD hydrolase, subfamily IA Rfer_3611 phosphatase IPR023198 - Phosphoglycolate phosphatase, domain 2 Rfer_3612 (vitamin IPR006158 - Cobalamin (vitamin B12)-binding domain Rfer_3612 cobalamin IPR006158 - Cobalamin (vitamin B12)-binding domain Rfer_3612 (vitamin IPR016176 - Cobalamin (vitamin B12)-dependent enzyme, catalytic Rfer_3612 cobalamin IPR016176 - Cobalamin (vitamin B12)-dependent enzyme, catalytic Rfer_3612 catalytic IPR016176 - Cobalamin (vitamin B12)-dependent enzyme, catalytic Rfer_3612 enzyme IPR016176 - Cobalamin (vitamin B12)-dependent enzyme, catalytic Rfer_3612 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3612 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3612 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3612 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3615 peptidase IPR002933 - Peptidase M20 Rfer_3616 endonuclease IPR005135 - Endonuclease/exonuclease/phosphatase Rfer_3616 phosphatase IPR005135 - Endonuclease/exonuclease/phosphatase Rfer_3620 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3622 transcriptional IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_3622 c-terminal IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_3622 regulator IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_3623 membrane IPR006143 - RND efflux pump, membrane fusion protein Rfer_3623 pump IPR006143 - RND efflux pump, membrane fusion protein Rfer_3623 efflux IPR006143 - RND efflux pump, membrane fusion protein Rfer_3625 abc IPR003439 - ABC transporter-like Rfer_3625 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3625 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3625 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3625 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3626 cyclase IPR029787 - Nucleotide cyclase Rfer_3626 nucleotide IPR029787 - Nucleotide cyclase Rfer_3633 beta-barrel IPR011250 - Outer membrane protein/outer membrane enzyme PagP , beta-barrel Rfer_3633 enzyme IPR011250 - Outer membrane protein/outer membrane enzyme PagP , beta-barrel Rfer_3633 outer IPR011250 - Outer membrane protein/outer membrane enzyme PagP , beta-barrel Rfer_3633 outer IPR011250 - Outer membrane protein/outer membrane enzyme PagP , beta-barrel Rfer_3633 membrane IPR011250 - Outer membrane protein/outer membrane enzyme PagP , beta-barrel Rfer_3633 membrane IPR011250 - Outer membrane protein/outer membrane enzyme PagP , beta-barrel Rfer_3634 transmembrane IPR016174 - Di-haem cytochrome, transmembrane Rfer_3634 cytochrome IPR016174 - Di-haem cytochrome, transmembrane Rfer_3635 cytochrome IPR011031 - Multihaem cytochrome Rfer_3636 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3639 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3639 factor IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_3639 polymerase IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_3639 sigma IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_3639 rna IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_3639 rna IPR014284 - RNA polymerase sigma-70 like domain Rfer_3639 polymerase IPR014284 - RNA polymerase sigma-70 like domain Rfer_3640 ribonuclease IPR012337 - Ribonuclease H-like domain Rfer_3642 fold IPR012336 - Thioredoxin-like fold Rfer_3644 cation IPR002524 - Cation efflux protein Rfer_3644 efflux IPR002524 - Cation efflux protein Rfer_3645 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3645 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3645 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3645 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3645 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3645 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3645 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3646 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3648 barrel IPR011008 - Dimeric alpha-beta barrel Rfer_3648 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3649 enzyme IPR000277 - Cys/Met metabolism, pyridoxal phosphate-dependent enzyme Rfer_3649 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_3650 c-terminal IPR009014 - Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Rfer_3650 oxidoreductase IPR009014 - Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Rfer_3652 synthase IPR006426 - Asparagine synthase, glutamine-hydrolyzing Rfer_3652 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_3652 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_3652 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_3652 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_3653 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_3654 cyclase IPR029787 - Nucleotide cyclase Rfer_3654 nucleotide IPR029787 - Nucleotide cyclase Rfer_3655 acyl IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_3655 acyl IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_3655 hydrolase IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_3655 transferase IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase Rfer_3659 major IPR011701 - Major facilitator superfamily Rfer_3659 major IPR020846 - Major facilitator superfamily domain Rfer_3662 lectin IPR013320 - Concanavalin A-like lectin/glucanase, subgroup Rfer_3663 symporter IPR002657 - Bile acid:sodium symporter Rfer_3663 resistance IPR002657 - Bile acid:sodium symporter Rfer_3664 atpase IPR016300 - Arsenical pump ATPase, ArsA/GET3 Rfer_3664 pump IPR016300 - Arsenical pump ATPase, ArsA/GET3 Rfer_3664 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3664 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3664 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3664 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3666 phosphatase IPR017867 - Protein-tyrosine phosphatase, low molecular weight Rfer_3666 protein-tyrosine IPR017867 - Protein-tyrosine phosphatase, low molecular weight Rfer_3667 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3670 dehydrogenase IPR000447 - FAD-dependent glycerol-3-phosphate dehydrogenase Rfer_3673 abc IPR000515 - MetI-like domain Rfer_3673 transmembrane IPR000515 - MetI-like domain Rfer_3673 transporter IPR000515 - MetI-like domain Rfer_3674 abc IPR000515 - MetI-like domain Rfer_3674 transmembrane IPR000515 - MetI-like domain Rfer_3674 transporter IPR000515 - MetI-like domain Rfer_3675 abc IPR003439 - ABC transporter-like Rfer_3675 binding IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_3675 c-terminal IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_3675 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3675 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3675 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3675 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3676 abc IPR003439 - ABC transporter-like Rfer_3676 binding IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_3676 c-terminal IPR008995 - Molybdate/tungstate binding, C-terminal Rfer_3676 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3676 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3676 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3676 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3677 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3678 kinase IPR000577 - Rfer_3678|Rfer_3678|REF_jgi:Rfer_3678|GeneID:3964046 Rfer_3679 domain-like IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_3679 dehydrogenase IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_3679 c-terminal IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_3679 6-phosphogluconate IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_3680 prenyltransferase IPR000537 - UbiA prenyltransferase family Rfer_3681 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3683 phosphatase-like IPR029052 - Metallo-dependent phosphatase-like Rfer_3684 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3684 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3684 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3684 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3684 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3684 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3684 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3685 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3688 helicase IPR014001 - Helicase, superfamily 1/2, ATP-binding domain Rfer_3688 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3688 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3688 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3688 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3689 dehydrogenase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_3689 acyl-coa IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_3689 oxidase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_3689 c-terminal IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_3689 dehydrogenase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_3689 oxidase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_3689 acyl-coa IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_3690 kinase IPR001576 - Phosphoglycerate kinase Rfer_3691 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_3691 aminotransferase IPR024169 - Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase Rfer_3695 synthetase IPR006194 - Glycine-tRNA synthetase, heterodimeric Rfer_3696 synthetase IPR006194 - Glycine-tRNA synthetase, heterodimeric Rfer_3699 acyl-coa IPR016181 - Acyl-CoA N-acyltransferase Rfer_3706 secretion IPR006135 - Type III secretion system substrate exporter Rfer_3707 secretion IPR001712 - Type III secretion system FHIPEP Rfer_3708 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3708 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3708 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3708 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3710 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3710 factor IPR012845 - RNA polymerase sigma factor, FliA/WhiG Rfer_3710 sigma IPR012845 - RNA polymerase sigma factor, FliA/WhiG Rfer_3710 rna IPR012845 - RNA polymerase sigma factor, FliA/WhiG Rfer_3710 polymerase IPR012845 - RNA polymerase sigma factor, FliA/WhiG Rfer_3710 factor IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_3710 polymerase IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_3710 sigma IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_3710 rna IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_3710 rna IPR014284 - RNA polymerase sigma-70 like domain Rfer_3710 polymerase IPR014284 - RNA polymerase sigma-70 like domain Rfer_3710 factor IPR016263 - RNA polymerase sporulation-specific sigma factor, SigK/SigE Rfer_3710 sigma IPR016263 - RNA polymerase sporulation-specific sigma factor, SigK/SigE Rfer_3710 polymerase IPR016263 - RNA polymerase sporulation-specific sigma factor, SigK/SigE Rfer_3710 rna IPR016263 - RNA polymerase sporulation-specific sigma factor, SigK/SigE Rfer_3725 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3725 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_3729 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_3730 c-terminal-like IPR010987 - Glutathione S-transferase, C-terminal-like Rfer_3730 fold IPR012336 - Thioredoxin-like fold Rfer_3732 histidine IPR029033 - Histidine phosphatase superfamily Rfer_3732 phosphatase IPR029033 - Histidine phosphatase superfamily Rfer_3733 barrel IPR012349 - FMN-binding split barrel Rfer_3737 subfamily IPR006439 - HAD hydrolase, subfamily IA Rfer_3737 hydrolase IPR006439 - HAD hydrolase, subfamily IA Rfer_3738 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3739 dna-binding IPR010982 - Lambda repressor-like, DNA-binding domain Rfer_3740 abc IPR003439 - ABC transporter-like Rfer_3740 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3740 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3740 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3740 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3741 abc IPR000515 - MetI-like domain Rfer_3741 transmembrane IPR000515 - MetI-like domain Rfer_3741 transporter IPR000515 - MetI-like domain Rfer_3743 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3744 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3744 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3744 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3744 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3746 hydrolase IPR003785 - Creatininase/formamide hydrolase Rfer_3748 transporter IPR002523 - Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB Rfer_3748 transport IPR002523 - Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB Rfer_3748 zinc IPR002523 - Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB Rfer_3749 factor IPR000649 - Initiation factor 2B-related Rfer_3749 initiation IPR000649 - Initiation factor 2B-related Rfer_3751 phosphorylase IPR001369 - PNP/MTAP phosphorylase Rfer_3752 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_3752 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_3754 alpha IPR026255 - NAD(P) transhydrogenase, alpha subunit Rfer_3755 hydrolase IPR015797 - NUDIX hydrolase domain-like Rfer_3755 domain-like IPR015797 - NUDIX hydrolase domain-like Rfer_3756 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_3756 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_3756 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_3756 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_3760 resistance IPR001036 - Acriflavin resistance protein Rfer_3761 membrane IPR006143 - RND efflux pump, membrane fusion protein Rfer_3761 pump IPR006143 - RND efflux pump, membrane fusion protein Rfer_3761 efflux IPR006143 - RND efflux pump, membrane fusion protein Rfer_3762 outer IPR003423 - Outer membrane efflux protein Rfer_3762 efflux IPR003423 - Outer membrane efflux protein Rfer_3762 membrane IPR003423 - Outer membrane efflux protein Rfer_3764 cyclase IPR029787 - Nucleotide cyclase Rfer_3764 nucleotide IPR029787 - Nucleotide cyclase Rfer_3765 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_3766 c-terminal IPR011049 - Serralysin-like metalloprotease, C-terminal Rfer_3768 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3770 abc IPR003439 - ABC transporter-like Rfer_3770 peptidase IPR005074 - Peptidase C39, bacteriocin processing Rfer_3770 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3770 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3770 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3770 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3772 dna-binding IPR000424 - Primosome PriB/single-strand DNA-binding Rfer_3773 major IPR011701 - Major facilitator superfamily Rfer_3773 major IPR020846 - Major facilitator superfamily domain Rfer_3774 abc IPR003439 - ABC transporter-like Rfer_3774 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3774 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3774 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3774 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3775 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_3775 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_3776 barrel IPR013785 - Aldolase-type TIM barrel Rfer_3777 ribonuclease IPR012337 - Ribonuclease H-like domain Rfer_3779 symporter IPR001734 - Sodium/solute symporter Rfer_3779 sodium IPR001734 - Sodium/solute symporter Rfer_3779 solute IPR001734 - Sodium/solute symporter Rfer_3779 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3779 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3779 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3779 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3779 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3779 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3779 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3782 symporter IPR001734 - Sodium/solute symporter Rfer_3782 sodium IPR001734 - Sodium/solute symporter Rfer_3782 solute IPR001734 - Sodium/solute symporter Rfer_3783 fold IPR014710 - RmlC-like jelly roll fold Rfer_3784 acyl-coa IPR016181 - Acyl-CoA N-acyltransferase Rfer_3785 fold IPR012336 - Thioredoxin-like fold Rfer_3786 ribosomal IPR000266 - Ribosomal protein S17 Rfer_3789 homology IPR004087 - K Homology domain Rfer_3789 domain-like IPR015946 - K homology domain-like, alpha/beta Rfer_3789 homology IPR015946 - K homology domain-like, alpha/beta Rfer_3789 beta IPR015946 - K homology domain-like, alpha/beta Rfer_3789 alpha IPR015946 - K homology domain-like, alpha/beta Rfer_3790 ribosomal IPR001063 - Ribosomal protein L22/L17 Rfer_3791 ribosomal IPR002222 - Ribosomal protein S19/S15 Rfer_3792 ribosomal IPR002171 - Ribosomal protein L2 Rfer_3792 translation IPR008991 - Translation protein SH3-like domain Rfer_3792 ribosomal IPR014722 - Ribosomal protein L2 domain 2 Rfer_3793 ribosomal IPR013025 - Ribosomal protein L25/L23 Rfer_3794 ribosomal IPR002136 - Ribosomal protein L4/L1e Rfer_3795 ribosomal IPR000597 - Ribosomal protein L3 Rfer_3795 translation IPR009000 - Translation protein, beta-barrel domain Rfer_3795 beta-barrel IPR009000 - Translation protein, beta-barrel domain Rfer_3796 ribosomal IPR001848 - Ribosomal protein S10 Rfer_3797 translation IPR009000 - Translation protein, beta-barrel domain Rfer_3797 beta-barrel IPR009000 - Translation protein, beta-barrel domain Rfer_3797 c-terminal IPR009001 - Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Rfer_3797 initiation IPR009001 - Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Rfer_3797 factor IPR009001 - Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Rfer_3797 translation IPR009001 - Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Rfer_3797 factor IPR009001 - Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Rfer_3797 elongation IPR009001 - Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Rfer_3797 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3797 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3797 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3797 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3798 elongation IPR004540 - Translation elongation factor EFG/EF2 Rfer_3798 factor IPR004540 - Translation elongation factor EFG/EF2 Rfer_3798 translation IPR004540 - Translation elongation factor EFG/EF2 Rfer_3798 translation IPR009000 - Translation protein, beta-barrel domain Rfer_3798 beta-barrel IPR009000 - Translation protein, beta-barrel domain Rfer_3798 elongation IPR009022 - Elongation factor G, III-V domain Rfer_3798 factor IPR009022 - Elongation factor G, III-V domain Rfer_3798 fold IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_3798 ribosomal IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_3798 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3798 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3798 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3798 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3799 ribosomal IPR000235 - Ribosomal protein S5/S7 Rfer_3800 ribosomal IPR006032 - Ribosomal protein S12/S23 Rfer_3802 fold IPR012336 - Thioredoxin-like fold Rfer_3804 uncharacterised IPR005265 - Uncharacterised protein family UPF0093 Rfer_3805 barrel IPR013785 - Aldolase-type TIM barrel Rfer_3806 transporter IPR002523 - Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB Rfer_3806 transport IPR002523 - Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB Rfer_3806 zinc IPR002523 - Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB Rfer_3808 abc IPR000515 - MetI-like domain Rfer_3808 transmembrane IPR000515 - MetI-like domain Rfer_3808 transporter IPR000515 - MetI-like domain Rfer_3809 abc IPR003439 - ABC transporter-like Rfer_3809 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3809 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3809 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3809 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3809 amino IPR030679 - Rfer_3809|Rfer_3809|REF_jgi:Rfer_3809|GeneID:3960064 Rfer_3809 component IPR030679 - Rfer_3809|Rfer_3809|REF_jgi:Rfer_3809|GeneID:3960064 Rfer_3809 transport IPR030679 - Rfer_3809|Rfer_3809|REF_jgi:Rfer_3809|GeneID:3960064 Rfer_3809 atpase IPR030679 - Rfer_3809|Rfer_3809|REF_jgi:Rfer_3809|GeneID:3960064 Rfer_3809 acid IPR030679 - Rfer_3809|Rfer_3809|REF_jgi:Rfer_3809|GeneID:3960064 Rfer_3810 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_3810 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_3810 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_3810 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_3811 fold IPR012336 - Thioredoxin-like fold Rfer_3814 abc IPR003439 - ABC transporter-like Rfer_3814 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3814 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3814 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3814 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3815 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_3815 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_3815 binding IPR028082 - Periplasmic binding protein-like I Rfer_3816 fold IPR012336 - Thioredoxin-like fold Rfer_3817 cytochrome IPR009056 - Cytochrome c-like domain Rfer_3817 c-like IPR009056 - Cytochrome c-like domain Rfer_3820 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3821 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3821 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3821 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3821 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3821 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3821 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3821 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3822 peptidase IPR001940 - Peptidase S1C Rfer_3822 peptidase IPR009003 - Trypsin-like cysteine/serine peptidase domain Rfer_3824 barrel IPR013785 - Aldolase-type TIM barrel Rfer_3826 abc IPR003439 - ABC transporter-like Rfer_3826 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3826 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3826 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3826 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3828 radical IPR007197 - Radical SAM Rfer_3828 barrel IPR013785 - Aldolase-type TIM barrel Rfer_3830 fold IPR011761 - ATP-grasp fold Rfer_3830 subdomain IPR013816 - ATP-grasp fold, subdomain 2 Rfer_3830 fold IPR013816 - ATP-grasp fold, subdomain 2 Rfer_3833 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_3833 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_3838 dehydrogenase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_3838 acyl-coa IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_3838 oxidase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_3838 c-terminal IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_3838 dehydrogenase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_3838 oxidase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_3838 acyl-coa IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_3842 dehydrogenase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_3842 acyl-coa IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_3842 oxidase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_3842 c-terminal IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_3842 dehydrogenase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_3842 oxidase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_3842 acyl-coa IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_3843 dna-binding IPR009061 - DNA binding domain, putative Rfer_3843 putative IPR009061 - DNA binding domain, putative Rfer_3846 lyase IPR000362 - Fumarate lyase family Rfer_3849 ribosomal IPR003489 - Ribosomal protein S30Ae/sigma 54 modulation protein Rfer_3849 sigma IPR003489 - Ribosomal protein S30Ae/sigma 54 modulation protein Rfer_3849 shock IPR011129 - Cold shock protein Rfer_3851 phosphatase-like IPR029052 - Metallo-dependent phosphatase-like Rfer_3852 ligase IPR001233 - tRNA-splicing ligase, RtcB Rfer_3854 peptidase IPR000671 - Peptidase A31 family Rfer_3858 fold IPR012336 - Thioredoxin-like fold Rfer_3859 transferase IPR011034 - Formyl transferase, C-terminal-like Rfer_3859 c-terminal-like IPR011034 - Formyl transferase, C-terminal-like Rfer_3865 archaeal IPR022813 - Protein-export membrane protein SecD/SecF, archaeal and bacterial Rfer_3865 bacterial IPR022813 - Protein-export membrane protein SecD/SecF, archaeal and bacterial Rfer_3865 membrane IPR022813 - Protein-export membrane protein SecD/SecF, archaeal and bacterial Rfer_3866 archaeal IPR022813 - Protein-export membrane protein SecD/SecF, archaeal and bacterial Rfer_3866 bacterial IPR022813 - Protein-export membrane protein SecD/SecF, archaeal and bacterial Rfer_3866 membrane IPR022813 - Protein-export membrane protein SecD/SecF, archaeal and bacterial Rfer_3868 enzyme IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_3868 thiamine IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_3868 c-terminal IPR011766 - Thiamine pyrophosphate enzyme, C-terminal TPP-binding Rfer_3868 thiamine IPR012110 - Thiamine pyrophosphate (TPP)-dependent enzyme Rfer_3868 enzyme IPR012110 - Thiamine pyrophosphate (TPP)-dependent enzyme Rfer_3868 catalytic IPR019752 - Pyruvate/ketoisovalerate oxidoreductase, catalytic domain Rfer_3868 pyruvate IPR019752 - Pyruvate/ketoisovalerate oxidoreductase, catalytic domain Rfer_3868 oxidoreductase IPR019752 - Pyruvate/ketoisovalerate oxidoreductase, catalytic domain Rfer_3870 barrel IPR011008 - Dimeric alpha-beta barrel Rfer_3871 dna-binding IPR009061 - DNA binding domain, putative Rfer_3871 putative IPR009061 - DNA binding domain, putative Rfer_3873 endonuclease IPR011335 - Restriction endonuclease type II-like Rfer_3873 trna IPR011856 - tRNA endonuclease-like domain Rfer_3876 domain-like IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_3876 dehydrogenase IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_3876 c-terminal IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_3876 6-phosphogluconate IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_3876 dehydrogenase IPR013328 - Dehydrogenase, multihelical Rfer_3876 6-phosphogluconate IPR013328 - Dehydrogenase, multihelical Rfer_3877 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3877 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3877 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3877 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3878 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3878 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3878 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3878 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3879 barrel IPR029066 - PLP-binding barrel Rfer_3881 biosynthesis IPR004960 - Bacterial lipid A biosynthesis acyltransferase Rfer_3881 lipid IPR004960 - Bacterial lipid A biosynthesis acyltransferase Rfer_3881 bacterial IPR004960 - Bacterial lipid A biosynthesis acyltransferase Rfer_3882 barrel IPR011008 - Dimeric alpha-beta barrel Rfer_3882 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3883 ornithine IPR003462 - Ornithine cyclodeaminase/mu-crystallin Rfer_3885 barrel IPR013785 - Aldolase-type TIM barrel Rfer_3887 (vitamin IPR006158 - Cobalamin (vitamin B12)-binding domain Rfer_3887 cobalamin IPR006158 - Cobalamin (vitamin B12)-binding domain Rfer_3888 (vitamin IPR016176 - Cobalamin (vitamin B12)-dependent enzyme, catalytic Rfer_3888 cobalamin IPR016176 - Cobalamin (vitamin B12)-dependent enzyme, catalytic Rfer_3888 catalytic IPR016176 - Cobalamin (vitamin B12)-dependent enzyme, catalytic Rfer_3888 enzyme IPR016176 - Cobalamin (vitamin B12)-dependent enzyme, catalytic Rfer_3891 glutamate IPR003739 - Lysine-2,3-aminomutase family Rfer_3891 radical IPR007197 - Radical SAM Rfer_3891 barrel IPR013785 - Aldolase-type TIM barrel Rfer_3892 barrel IPR011008 - Dimeric alpha-beta barrel Rfer_3892 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3893 cyclase IPR029787 - Nucleotide cyclase Rfer_3893 nucleotide IPR029787 - Nucleotide cyclase Rfer_3895 glycosyl IPR000811 - Glycosyl transferase, family 35 Rfer_3895 transferase IPR000811 - Glycosyl transferase, family 35 Rfer_3897 transcriptional IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_3897 c-terminal IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_3897 regulator IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_3898 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_3898 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_3900 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3901 helicase IPR014001 - Helicase, superfamily 1/2, ATP-binding domain Rfer_3901 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3901 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3901 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3901 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3902 crispr-associated IPR021124 - CRISPR-associated protein, Cas5 Rfer_3904 crispr-associated IPR006482 - CRISPR-associated protein TM1801 Rfer_3907 crispr-associated IPR002729 - CRISPR-associated protein Cas1 Rfer_3908 associated IPR019199 - Virulence-associated protein D / CRISPR associated protein Cas2 Rfer_3916 abc IPR003439 - ABC transporter-like Rfer_3916 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3916 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3916 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3916 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3918 oxidoreductase IPR012132 - Glucose-methanol-choline oxidoreductase Rfer_3921 cell IPR007227 - Cell shape-determining protein MreD Rfer_3925 amidase IPR000120 - Amidase Rfer_3925 amidase IPR023631 - Amidase signature domain Rfer_3928 phosphoribosyltransferase IPR023031 - Orotate phosphoribosyltransferase Rfer_3929 endonuclease IPR005135 - Endonuclease/exonuclease/phosphatase Rfer_3929 phosphatase IPR005135 - Endonuclease/exonuclease/phosphatase Rfer_3931 zinc IPR007527 - Zinc finger, SWIM-type Rfer_3931 finger IPR007527 - Zinc finger, SWIM-type Rfer_3931 helicase IPR014001 - Helicase, superfamily 1/2, ATP-binding domain Rfer_3931 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3931 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3931 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3931 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3932 domain-like IPR029016 - GAF domain-like Rfer_3932 cyclase IPR029787 - Nucleotide cyclase Rfer_3932 nucleotide IPR029787 - Nucleotide cyclase Rfer_3934 synthase IPR003698 - Lipoyl synthase Rfer_3934 radical IPR007197 - Radical SAM Rfer_3934 barrel IPR013785 - Aldolase-type TIM barrel Rfer_3938 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3938 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3938 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3938 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3938 domain-like IPR029016 - GAF domain-like Rfer_3941 phosphatase IPR015655 - Protein phosphatase 2C Rfer_3942 kinase-like IPR011009 - Protein kinase-like domain Rfer_3943 integral IPR005496 - Integral membrane protein TerC Rfer_3943 membrane IPR005496 - Integral membrane protein TerC Rfer_3945 fold IPR011761 - ATP-grasp fold Rfer_3945 subdomain IPR013816 - ATP-grasp fold, subdomain 2 Rfer_3945 fold IPR013816 - ATP-grasp fold, subdomain 2 Rfer_3947 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3948 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3948 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3948 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3948 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3949 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3950 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_3951 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3951 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3951 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3951 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_3951 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3951 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3951 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_3955 dna IPR000380 - DNA topoisomerase, type IA Rfer_3955 topoisomerase IPR000380 - DNA topoisomerase, type IA Rfer_3963 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_3963 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_3966 c-terminal IPR009014 - Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Rfer_3966 oxidoreductase IPR009014 - Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Rfer_3970 transporter IPR000412 - ABC-2 transporter Rfer_3971 abc IPR003439 - ABC transporter-like Rfer_3971 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3971 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3971 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3971 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_3978 binding IPR009081 - Acyl carrier protein-like Rfer_3979 phosphatase IPR000326 - Phosphatidic acid phosphatase type 2/haloperoxidase Rfer_3979 acid IPR000326 - Phosphatidic acid phosphatase type 2/haloperoxidase Rfer_3980 binding IPR009081 - Acyl carrier protein-like Rfer_3982 carrier IPR004564 - Outer membrane lipoprotein carrier protein LolA-like Rfer_3982 membrane IPR004564 - Outer membrane lipoprotein carrier protein LolA-like Rfer_3982 lipoprotein IPR004564 - Outer membrane lipoprotein carrier protein LolA-like Rfer_3982 outer IPR004564 - Outer membrane lipoprotein carrier protein LolA-like Rfer_3983 hydrolase IPR011330 - Glycoside hydrolase/deacetylase, beta/alpha-barrel Rfer_3983 glycoside IPR011330 - Glycoside hydrolase/deacetylase, beta/alpha-barrel Rfer_3983 beta IPR011330 - Glycoside hydrolase/deacetylase, beta/alpha-barrel Rfer_3987 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_3987 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_3989 biosynthesis IPR004960 - Bacterial lipid A biosynthesis acyltransferase Rfer_3989 lipid IPR004960 - Bacterial lipid A biosynthesis acyltransferase Rfer_3989 bacterial IPR004960 - Bacterial lipid A biosynthesis acyltransferase Rfer_3991 alpha IPR029058 - Alpha/Beta hydrolase fold Rfer_3991 hydrolase IPR029058 - Alpha/Beta hydrolase fold Rfer_3991 beta IPR029058 - Alpha/Beta hydrolase fold Rfer_3991 fold IPR029058 - Alpha/Beta hydrolase fold Rfer_3994 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_3994 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_3996 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_4000 binding IPR009081 - Acyl carrier protein-like Rfer_4005 dna IPR000212 - DNA helicase, UvrD/REP type Rfer_4005 helicase IPR000212 - DNA helicase, UvrD/REP type Rfer_4005 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4005 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4005 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4005 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4006 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_4010 helicase IPR014001 - Helicase, superfamily 1/2, ATP-binding domain Rfer_4010 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4010 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4010 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4010 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4011 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_4015 dioxygenase IPR029068 - Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Rfer_4015 resistance IPR029068 - Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Rfer_4016 dioxygenase IPR005123 - Oxoglutarate/iron-dependent dioxygenase Rfer_4017 c-terminal-like IPR010987 - Glutathione S-transferase, C-terminal-like Rfer_4017 fold IPR012336 - Thioredoxin-like fold Rfer_4019 synthase-like IPR011607 - Methylglyoxal synthase-like domain Rfer_4022 reductase IPR001395 - Aldo/keto reductase Rfer_4022 beta IPR001395 - Aldo/keto reductase Rfer_4022 channel IPR001395 - Aldo/keto reductase Rfer_4022 potassium IPR001395 - Aldo/keto reductase Rfer_4023 dna-binding IPR009061 - DNA binding domain, putative Rfer_4023 putative IPR009061 - DNA binding domain, putative Rfer_4024 barrel IPR011008 - Dimeric alpha-beta barrel Rfer_4025 barrel IPR011008 - Dimeric alpha-beta barrel Rfer_4026 dioxygenase IPR029068 - Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Rfer_4026 resistance IPR029068 - Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Rfer_4027 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_4027 factor IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_4027 polymerase IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_4027 sigma IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_4027 rna IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_4027 rna IPR014284 - RNA polymerase sigma-70 like domain Rfer_4027 polymerase IPR014284 - RNA polymerase sigma-70 like domain Rfer_4028 cyclase IPR029787 - Nucleotide cyclase Rfer_4028 nucleotide IPR029787 - Nucleotide cyclase Rfer_4029 fold IPR016024 - Armadillo-type fold Rfer_4030 cyclase IPR029787 - Nucleotide cyclase Rfer_4030 nucleotide IPR029787 - Nucleotide cyclase Rfer_4033 domain-like IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_4033 dehydrogenase IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_4033 c-terminal IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_4033 6-phosphogluconate IPR008927 - 6-phosphogluconate dehydrogenase, C-terminal-like Rfer_4033 dehydrogenase IPR013328 - Dehydrogenase, multihelical Rfer_4033 6-phosphogluconate IPR013328 - Dehydrogenase, multihelical Rfer_4035 hydrolase IPR011613 - Glycoside hydrolase family 15 Rfer_4035 phosphorylase IPR011613 - Glycoside hydrolase family 15 Rfer_4035 chain IPR011613 - Glycoside hydrolase family 15 Rfer_4035 kinase IPR011613 - Glycoside hydrolase family 15 Rfer_4035 glycoside IPR011613 - Glycoside hydrolase family 15 Rfer_4035 regulatory IPR011613 - Glycoside hydrolase family 15 Rfer_4038 phosphatase IPR000326 - Phosphatidic acid phosphatase type 2/haloperoxidase Rfer_4038 acid IPR000326 - Phosphatidic acid phosphatase type 2/haloperoxidase Rfer_4040 cofactor IPR023045 - Molybdenum cofactor biosynthesis C Rfer_4040 biosynthesis IPR023045 - Molybdenum cofactor biosynthesis C Rfer_4044 integral IPR005496 - Integral membrane protein TerC Rfer_4044 membrane IPR005496 - Integral membrane protein TerC Rfer_4046 kinase IPR016898 - Polyphosphate kinase 2 Rfer_4046 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4046 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4046 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4046 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4047 reductase IPR002347 - Glucose/ribitol dehydrogenase Rfer_4047 dehydrogenase IPR002347 - Glucose/ribitol dehydrogenase Rfer_4048 endonuclease IPR011335 - Restriction endonuclease type II-like Rfer_4049 lyase IPR000362 - Fumarate lyase family Rfer_4050 c-terminal-like IPR010987 - Glutathione S-transferase, C-terminal-like Rfer_4050 fold IPR012336 - Thioredoxin-like fold Rfer_4052 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_4052 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_4052 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_4052 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_4055 cyclase IPR029787 - Nucleotide cyclase Rfer_4055 nucleotide IPR029787 - Nucleotide cyclase Rfer_4056 kinase-like IPR011009 - Protein kinase-like domain Rfer_4057 barrel IPR012349 - FMN-binding split barrel Rfer_4060 phosphatase-like IPR029052 - Metallo-dependent phosphatase-like Rfer_4061 transcriptional IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_4061 c-terminal IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_4061 regulator IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_4062 abc IPR003439 - ABC transporter-like Rfer_4062 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4062 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4062 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4062 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4063 transporter IPR001851 - ABC transporter, permease Rfer_4063 abc IPR001851 - ABC transporter, permease Rfer_4063 permease IPR001851 - ABC transporter, permease Rfer_4064 transporter IPR001851 - ABC transporter, permease Rfer_4064 abc IPR001851 - ABC transporter, permease Rfer_4064 permease IPR001851 - ABC transporter, permease Rfer_4065 protein-like IPR028082 - Periplasmic binding protein-like I Rfer_4065 periplasmic IPR028082 - Periplasmic binding protein-like I Rfer_4065 binding IPR028082 - Periplasmic binding protein-like I Rfer_4066 abc IPR003439 - ABC transporter-like Rfer_4066 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4066 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4066 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4066 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4067 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_4067 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_4070 dehydrogenase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_4070 acyl-coa IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_4070 oxidase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_4070 c-terminal IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_4070 dehydrogenase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_4070 oxidase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_4070 acyl-coa IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_4071 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_4073 cytochrome IPR011031 - Multihaem cytochrome Rfer_4075 component IPR024717 - Denitrification system component NapC/NirT/NrfH Rfer_4076 cytochrome IPR011031 - Multihaem cytochrome Rfer_4076 component IPR024717 - Denitrification system component NapC/NirT/NrfH Rfer_4077 cytochrome IPR009056 - Cytochrome c-like domain Rfer_4077 c-like IPR009056 - Cytochrome c-like domain Rfer_4079 cytochrome IPR011031 - Multihaem cytochrome Rfer_4080 cytochrome IPR009056 - Cytochrome c-like domain Rfer_4080 c-like IPR009056 - Cytochrome c-like domain Rfer_4080 cytochrome IPR011031 - Multihaem cytochrome Rfer_4082 cytochrome IPR011031 - Multihaem cytochrome Rfer_4083 cytochrome IPR011031 - Multihaem cytochrome Rfer_4084 cytochrome IPR009056 - Cytochrome c-like domain Rfer_4084 c-like IPR009056 - Cytochrome c-like domain Rfer_4085 cytochrome IPR009056 - Cytochrome c-like domain Rfer_4085 c-like IPR009056 - Cytochrome c-like domain Rfer_4092 peptidase IPR000671 - Peptidase A31 family Rfer_4096 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4096 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4096 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4096 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4097 alpha IPR017945 - DHBP synthase RibB-like alpha/beta domain Rfer_4097 beta IPR017945 - DHBP synthase RibB-like alpha/beta domain Rfer_4097 synthase IPR017945 - DHBP synthase RibB-like alpha/beta domain Rfer_4100 c-terminal IPR010918 - AIR synthase-related protein, C-terminal domain Rfer_4101 transferase IPR011034 - Formyl transferase, C-terminal-like Rfer_4101 c-terminal-like IPR011034 - Formyl transferase, C-terminal-like Rfer_4102 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4102 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4102 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4102 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4103 transcriptional IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_4103 c-terminal IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_4103 regulator IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal Rfer_4104 resistance IPR001036 - Acriflavin resistance protein Rfer_4105 membrane IPR006143 - RND efflux pump, membrane fusion protein Rfer_4105 pump IPR006143 - RND efflux pump, membrane fusion protein Rfer_4105 efflux IPR006143 - RND efflux pump, membrane fusion protein Rfer_4106 outer IPR003423 - Outer membrane efflux protein Rfer_4106 efflux IPR003423 - Outer membrane efflux protein Rfer_4106 membrane IPR003423 - Outer membrane efflux protein Rfer_4107 effector IPR011256 - Regulatory factor, effector binding domain Rfer_4107 binding IPR011256 - Regulatory factor, effector binding domain Rfer_4107 factor IPR011256 - Regulatory factor, effector binding domain Rfer_4107 regulatory IPR011256 - Regulatory factor, effector binding domain Rfer_4108 predicted IPR009725 - Predicted 3-demethylubiquinone-9 3-methyltransferase Rfer_4108 dioxygenase IPR029068 - Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Rfer_4108 resistance IPR029068 - Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Rfer_4110 dioxygenase IPR029068 - Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Rfer_4110 resistance IPR029068 - Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Rfer_4111 phosphate IPR020831 - Glyceraldehyde/Erythrose phosphate dehydrogenase family Rfer_4111 dehydrogenase IPR020831 - Glyceraldehyde/Erythrose phosphate dehydrogenase family Rfer_4112 c-terminal IPR009014 - Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Rfer_4112 oxidoreductase IPR009014 - Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Rfer_4113 barrel IPR013785 - Aldolase-type TIM barrel Rfer_4115 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_4116 unknown IPR007438 - Protein of unknown function DUF488 Rfer_4117 radical IPR007197 - Radical SAM Rfer_4122 histidine IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_4122 kinase-like IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_4122 atpase IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_4122 c-terminal IPR003594 - Histidine kinase-like ATPase, C-terminal domain Rfer_4122 histidine IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_4122 signal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_4122 c-terminal IPR004358 - Signal transduction histidine kinase-related protein, C-terminal Rfer_4124 chaperone IPR003782 - Copper chaperone SCO1/SenC Rfer_4124 copper IPR003782 - Copper chaperone SCO1/SenC Rfer_4124 fold IPR012336 - Thioredoxin-like fold Rfer_4125 cytochrome IPR009056 - Cytochrome c-like domain Rfer_4125 c-like IPR009056 - Cytochrome c-like domain Rfer_4126 cytochrome IPR009056 - Cytochrome c-like domain Rfer_4126 c-like IPR009056 - Cytochrome c-like domain Rfer_4127 cytochrome IPR000883 - Cytochrome c oxidase subunit I Rfer_4127 oxidase IPR000883 - Cytochrome c oxidase subunit I Rfer_4127 cytochrome IPR023616 - Cytochrome c oxidase, subunit I domain Rfer_4130 unknown IPR007438 - Protein of unknown function DUF488 Rfer_4133 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_4134 cytochrome IPR009056 - Cytochrome c-like domain Rfer_4134 c-like IPR009056 - Cytochrome c-like domain Rfer_4136 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_4136 factor IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_4136 polymerase IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_4136 sigma IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_4136 rna IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_4136 rna IPR014284 - RNA polymerase sigma-70 like domain Rfer_4136 polymerase IPR014284 - RNA polymerase sigma-70 like domain Rfer_4138 cytochrome IPR009056 - Cytochrome c-like domain Rfer_4138 c-like IPR009056 - Cytochrome c-like domain Rfer_4139 enzyme IPR000277 - Cys/Met metabolism, pyridoxal phosphate-dependent enzyme Rfer_4139 transferase IPR015424 - Pyridoxal phosphate-dependent transferase Rfer_4140 channel IPR004695 - Voltage-dependent anion channel Rfer_4140 voltage-dependent IPR004695 - Voltage-dependent anion channel Rfer_4141 cytochrome IPR001128 - Cytochrome P450 Rfer_4142 phosphatase-like IPR029052 - Metallo-dependent phosphatase-like Rfer_4146 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_4146 factor IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_4146 polymerase IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_4146 sigma IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_4146 rna IPR013324 - RNA polymerase sigma factor, region 3/4 Rfer_4146 rna IPR014284 - RNA polymerase sigma-70 like domain Rfer_4146 polymerase IPR014284 - RNA polymerase sigma-70 like domain Rfer_4148 resistance IPR025961 - Heavy-metal resistance protein Rfer_4156 uncharacterised IPR010282 - Uncharacterised protein family HutD/Ves Rfer_4156 fold IPR014710 - RmlC-like jelly roll fold Rfer_4157 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_4157 transcription IPR028978 - Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain Rfer_4158 abc IPR003439 - ABC transporter-like Rfer_4158 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4158 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4158 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4158 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4158 amino IPR030679 - Rfer_4158|Rfer_4158|REF_jgi:Rfer_4158|GeneID:3961856 Rfer_4158 component IPR030679 - Rfer_4158|Rfer_4158|REF_jgi:Rfer_4158|GeneID:3961856 Rfer_4158 transport IPR030679 - Rfer_4158|Rfer_4158|REF_jgi:Rfer_4158|GeneID:3961856 Rfer_4158 atpase IPR030679 - Rfer_4158|Rfer_4158|REF_jgi:Rfer_4158|GeneID:3961856 Rfer_4158 acid IPR030679 - Rfer_4158|Rfer_4158|REF_jgi:Rfer_4158|GeneID:3961856 Rfer_4159 abc IPR000515 - MetI-like domain Rfer_4159 transmembrane IPR000515 - MetI-like domain Rfer_4159 transporter IPR000515 - MetI-like domain Rfer_4161 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_4161 domain-like IPR029016 - GAF domain-like Rfer_4165 transfer IPR001308 - Electron transfer flavoprotein, alpha subunit Rfer_4165 electron IPR001308 - Electron transfer flavoprotein, alpha subunit Rfer_4165 alpha IPR001308 - Electron transfer flavoprotein, alpha subunit Rfer_4165 flavoprotein IPR001308 - Electron transfer flavoprotein, alpha subunit Rfer_4165 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_4165 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_4165 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_4165 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_4166 transfer IPR012255 - Electron transfer flavoprotein, beta subunit Rfer_4166 electron IPR012255 - Electron transfer flavoprotein, beta subunit Rfer_4166 flavoprotein IPR012255 - Electron transfer flavoprotein, beta subunit Rfer_4166 beta IPR012255 - Electron transfer flavoprotein, beta subunit Rfer_4166 beta IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_4166 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_4166 alpha IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_4166 fold IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold Rfer_4169 dehydrogenase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_4169 acyl-coa IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_4169 oxidase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_4169 c-terminal IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_4169 dehydrogenase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_4169 oxidase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_4169 acyl-coa IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_4171 beta IPR011206 - Citrate lyase beta subunit-like Rfer_4171 lyase IPR011206 - Citrate lyase beta subunit-like Rfer_4171 kinase-like IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_4171 pyruvate IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_4176 major IPR011701 - Major facilitator superfamily Rfer_4176 major IPR020846 - Major facilitator superfamily domain Rfer_4178 hydrolase IPR003702 - Acetyl-CoA hydrolase/transferase Rfer_4178 transferase IPR003702 - Acetyl-CoA hydrolase/transferase Rfer_4179 beta IPR011206 - Citrate lyase beta subunit-like Rfer_4179 lyase IPR011206 - Citrate lyase beta subunit-like Rfer_4179 kinase-like IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_4179 pyruvate IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain Rfer_4181 dehydrogenase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_4181 acyl-coa IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_4181 oxidase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_4181 c-terminal IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_4181 dehydrogenase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_4181 oxidase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_4181 acyl-coa IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_4184 transporter IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_4184 receptor IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_4184 solute IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_4185 methyltransferase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase-like Rfer_4186 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_4186 transcription IPR028978 - Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain Rfer_4187 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_4188 transcription IPR028978 - Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain Rfer_4191 major IPR011701 - Major facilitator superfamily Rfer_4191 major IPR020846 - Major facilitator superfamily domain Rfer_4192 alpha IPR017945 - DHBP synthase RibB-like alpha/beta domain Rfer_4192 beta IPR017945 - DHBP synthase RibB-like alpha/beta domain Rfer_4192 synthase IPR017945 - DHBP synthase RibB-like alpha/beta domain Rfer_4196 transporter IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_4196 receptor IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_4196 solute IPR018389 - Bacterial extracellular solute-binding protein, family 7 Rfer_4197 alpha IPR017945 - DHBP synthase RibB-like alpha/beta domain Rfer_4197 beta IPR017945 - DHBP synthase RibB-like alpha/beta domain Rfer_4197 synthase IPR017945 - DHBP synthase RibB-like alpha/beta domain Rfer_4199 barrel IPR013785 - Aldolase-type TIM barrel Rfer_4202 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4202 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4202 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4202 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4203 ribonuclease IPR012337 - Ribonuclease H-like domain Rfer_4204 ligase IPR000873 - AMP-dependent synthetase/ligase Rfer_4204 synthetase IPR000873 - AMP-dependent synthetase/ligase Rfer_4207 dehydrogenase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_4207 acyl-coa IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_4207 oxidase IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_4207 c-terminal IPR009075 - Acyl-CoA dehydrogenase/oxidase C-terminal Rfer_4207 dehydrogenase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_4207 oxidase IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_4207 acyl-coa IPR013786 - Acyl-CoA dehydrogenase/oxidase, N-terminal Rfer_4208 helical IPR011990 - Tetratricopeptide-like helical domain Rfer_4208 dna-binding IPR011991 - Winged helix-turn-helix DNA-binding domain Rfer_4208 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4208 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4208 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4208 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4211 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4211 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4211 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4211 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4217 polymerase IPR009025 - DNA-directed RNA polymerase, RBP11-like dimerisation domain Rfer_4217 rna IPR009025 - DNA-directed RNA polymerase, RBP11-like dimerisation domain Rfer_4217 dna-directed IPR009025 - DNA-directed RNA polymerase, RBP11-like dimerisation domain Rfer_4218 ribosomal IPR022801 - Ribosomal protein S4/S9 Rfer_4219 ribosomal IPR001971 - Ribosomal protein S11 Rfer_4220 ribosomal IPR001892 - Ribosomal protein S13 Rfer_4220 ribosomal IPR010979 - Ribosomal protein S13-like, H2TH Rfer_4226 ribosomal IPR000851 - Ribosomal protein S5 Rfer_4226 rna-binding IPR014720 - Double-stranded RNA-binding domain Rfer_4226 fold IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_4226 ribosomal IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_4227 ribosomal IPR005484 - Ribosomal protein L18/L5 Rfer_4228 ribosomal IPR000702 - Ribosomal protein L6 Rfer_4230 ribosomal IPR001209 - Ribosomal protein S14 Rfer_4231 ribosomal IPR002132 - Ribosomal protein L5 Rfer_4232 translation IPR008991 - Translation protein SH3-like domain Rfer_4232 ribosomal IPR014722 - Ribosomal protein L2 domain 2 Rfer_4233 ribosomal IPR000218 - Ribosomal protein L14b/L23e Rfer_4235 assembly IPR010664 - Lipopolysaccharide assembly, LptC-related Rfer_4236 phosphatase IPR010023 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase Rfer_4238 exchanger IPR006153 - Cation/H+ exchanger Rfer_4238 cation IPR006153 - Cation/H+ exchanger Rfer_4241 binding IPR006073 - GTP binding domain Rfer_4241 cleavage IPR027266 - GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 Rfer_4241 glycine IPR027266 - GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 Rfer_4241 nucleoside IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4241 containing IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4241 triphosphate IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4241 hydrolase IPR027417 - P-loop containing nucleoside triphosphate hydrolase Rfer_4242 membrane IPR001708 - Membrane insertase OXA1/ALB3/YidC Rfer_4244 fold IPR020568 - Ribosomal protein S5 domain 2-type fold Rfer_4244 ribosomal IPR020568 - Ribosomal protein S5 domain 2-type fold