RPE_0017	PWY-3781	aerobic respiration I (cytochrome c)
RPE_0017	PWY-4521	arsenite oxidation I (respiratory)
RPE_0017	PWY-6692	Fe(II) oxidation
RPE_0017	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPE_0018	PWY-3781	aerobic respiration I (cytochrome c)
RPE_0018	PWY-4521	arsenite oxidation I (respiratory)
RPE_0018	PWY-6692	Fe(II) oxidation
RPE_0018	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPE_0019	PWY-6654	phosphopantothenate biosynthesis III
RPE_0024	PWY-4041	&gamma;-glutamyl cycle
RPE_0024	PWY-5826	hypoglycin biosynthesis
RPE_0026	PWY-6123	inosine-5'-phosphate biosynthesis I
RPE_0026	PWY-6124	inosine-5'-phosphate biosynthesis II
RPE_0026	PWY-7234	inosine-5'-phosphate biosynthesis III
RPE_0033	PWY-5491	diethylphosphate degradation
RPE_0034	PWY-4983	L-citrulline-nitric oxide cycle
RPE_0034	PWY-4984	urea cycle
RPE_0034	PWY-5	canavanine biosynthesis
RPE_0034	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPE_0034	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPE_0047	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
RPE_0047	PWY-2201	folate transformations I
RPE_0047	PWY-3841	folate transformations II
RPE_0047	PWY-5030	L-histidine degradation III
RPE_0047	PWY-5497	purine nucleobases degradation II (anaerobic)
RPE_0047	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
RPE_0064	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPE_0064	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPE_0066	PWY-5667	CDP-diacylglycerol biosynthesis I
RPE_0066	PWY-5981	CDP-diacylglycerol biosynthesis III
RPE_0069	PWY-6672	<i>cis</i>-genanyl-CoA degradation
RPE_0069	PWY-7118	chitin degradation to ethanol
RPE_0109	PWY-6167	flavin biosynthesis II (archaea)
RPE_0113	PWY-2161	folate polyglutamylation
RPE_0132	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
RPE_0135	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
RPE_0140	PWY-4381	fatty acid biosynthesis initiation I
RPE_0140	PWY-5743	3-hydroxypropanoate cycle
RPE_0140	PWY-5744	glyoxylate assimilation
RPE_0140	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_0140	PWY-6679	jadomycin biosynthesis
RPE_0140	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPE_0143	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPE_0144	PWY-6164	3-dehydroquinate biosynthesis I
RPE_0148	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPE_0149	PWY-6502	oxidized GTP and dGTP detoxification
RPE_0157	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
RPE_0157	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
RPE_0157	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
RPE_0157	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
RPE_0157	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
RPE_0157	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
RPE_0157	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
RPE_0157	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
RPE_0157	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
RPE_0157	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
RPE_0158	PWY-2941	L-lysine biosynthesis II
RPE_0158	PWY-2942	L-lysine biosynthesis III
RPE_0158	PWY-5097	L-lysine biosynthesis VI
RPE_0158	PWY-6559	spermidine biosynthesis II
RPE_0158	PWY-6562	norspermidine biosynthesis
RPE_0158	PWY-7153	grixazone biosynthesis
RPE_0164	PWY-5386	methylglyoxal degradation I
RPE_0167	PWY-5676	acetyl-CoA fermentation to butanoate II
RPE_0167	PWY-5741	ethylmalonyl-CoA pathway
RPE_0167	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RPE_0183	PWY-7560	methylerythritol phosphate pathway II
RPE_0191	PWY-6854	ethylene biosynthesis III (microbes)
RPE_0248	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPE_0248	PWY-2361	3-oxoadipate degradation
RPE_0248	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
RPE_0255	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPE_0255	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPE_0255	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPE_0255	PWY-6113	superpathway of mycolate biosynthesis
RPE_0255	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPE_0255	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPE_0255	PWY-7096	triclosan resistance
RPE_0255	PWYG-321	mycolate biosynthesis
RPE_0257	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPE_0257	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPE_0257	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPE_0257	PWY-5994	palmitate biosynthesis I (animals and fungi)
RPE_0257	PWY-6113	superpathway of mycolate biosynthesis
RPE_0257	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPE_0257	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPE_0257	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPE_0257	PWYG-321	mycolate biosynthesis
RPE_0267	PWY-5381	pyridine nucleotide cycling (plants)
RPE_0267	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
RPE_0277	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPE_0277	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPE_0280	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPE_0282	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPE_0290	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
RPE_0290	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RPE_0296	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RPE_0297	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RPE_0298	PWY-5392	reductive TCA cycle II
RPE_0298	PWY-5537	pyruvate fermentation to acetate V
RPE_0298	PWY-5538	pyruvate fermentation to acetate VI
RPE_0298	PWY-5690	TCA cycle II (plants and fungi)
RPE_0298	PWY-5913	TCA cycle VI (obligate autotrophs)
RPE_0298	PWY-6728	methylaspartate cycle
RPE_0298	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_0298	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPE_0299	PWY-5392	reductive TCA cycle II
RPE_0299	PWY-5537	pyruvate fermentation to acetate V
RPE_0299	PWY-5538	pyruvate fermentation to acetate VI
RPE_0299	PWY-5690	TCA cycle II (plants and fungi)
RPE_0299	PWY-5913	TCA cycle VI (obligate autotrophs)
RPE_0299	PWY-6728	methylaspartate cycle
RPE_0299	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_0299	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPE_0300	PWY-1622	formaldehyde assimilation I (serine pathway)
RPE_0300	PWY-5392	reductive TCA cycle II
RPE_0300	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPE_0300	PWY-5690	TCA cycle II (plants and fungi)
RPE_0300	PWY-5913	TCA cycle VI (obligate autotrophs)
RPE_0300	PWY-6728	methylaspartate cycle
RPE_0300	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_0300	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPE_0300	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPE_0321	PWY-2941	L-lysine biosynthesis II
RPE_0321	PWY-5097	L-lysine biosynthesis VI
RPE_0330	PWY-6829	tRNA methylation (yeast)
RPE_0330	PWY-7285	methylwyosine biosynthesis
RPE_0330	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
RPE_0333	PWY-5278	sulfite oxidation III
RPE_0333	PWY-5340	sulfate activation for sulfonation
RPE_0333	PWY-6683	sulfate reduction III (assimilatory)
RPE_0333	PWY-6932	selenate reduction
RPE_0334	PWY-5278	sulfite oxidation III
RPE_0334	PWY-5340	sulfate activation for sulfonation
RPE_0334	PWY-6683	sulfate reduction III (assimilatory)
RPE_0334	PWY-6932	selenate reduction
RPE_0341	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPE_0341	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPE_0341	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPE_0341	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPE_0342	PWY-1622	formaldehyde assimilation I (serine pathway)
RPE_0342	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPE_0343	PWY-2941	L-lysine biosynthesis II
RPE_0343	PWY-2942	L-lysine biosynthesis III
RPE_0343	PWY-5097	L-lysine biosynthesis VI
RPE_0345	PWY-5686	UMP biosynthesis
RPE_0354	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
RPE_0364	PWY-3961	phosphopantothenate biosynthesis II
RPE_0382	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPE_0392	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPE_0422	PWY-5532	adenosine nucleotides degradation IV
RPE_0422	PWY-5723	Rubisco shunt
RPE_0444	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPE_0446	PWY-7205	CMP phosphorylation
RPE_0456	PWY-4381	fatty acid biosynthesis initiation I
RPE_0456	PWY-5743	3-hydroxypropanoate cycle
RPE_0456	PWY-5744	glyoxylate assimilation
RPE_0456	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_0456	PWY-6679	jadomycin biosynthesis
RPE_0456	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPE_0457	PWY-2161	folate polyglutamylation
RPE_0466	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RPE_0466	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPE_0466	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_0466	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
RPE_0470	PWY-5839	menaquinol-7 biosynthesis
RPE_0470	PWY-5844	menaquinol-9 biosynthesis
RPE_0470	PWY-5849	menaquinol-6 biosynthesis
RPE_0470	PWY-5890	menaquinol-10 biosynthesis
RPE_0470	PWY-5891	menaquinol-11 biosynthesis
RPE_0470	PWY-5892	menaquinol-12 biosynthesis
RPE_0470	PWY-5895	menaquinol-13 biosynthesis
RPE_0475	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPE_0480	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RPE_0484	PWY-2941	L-lysine biosynthesis II
RPE_0484	PWY-2942	L-lysine biosynthesis III
RPE_0484	PWY-5097	L-lysine biosynthesis VI
RPE_0484	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPE_0484	PWY-6559	spermidine biosynthesis II
RPE_0484	PWY-6562	norspermidine biosynthesis
RPE_0484	PWY-7153	grixazone biosynthesis
RPE_0484	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPE_0512	PWY-3781	aerobic respiration I (cytochrome c)
RPE_0512	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RPE_0512	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPE_0512	PWY-5690	TCA cycle II (plants and fungi)
RPE_0512	PWY-6728	methylaspartate cycle
RPE_0512	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_0512	PWY-7254	TCA cycle VII (acetate-producers)
RPE_0512	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPE_0514	PWY-3781	aerobic respiration I (cytochrome c)
RPE_0514	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RPE_0514	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPE_0514	PWY-5690	TCA cycle II (plants and fungi)
RPE_0514	PWY-6728	methylaspartate cycle
RPE_0514	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_0514	PWY-7254	TCA cycle VII (acetate-producers)
RPE_0514	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPE_0515	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RPE_0515	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RPE_0548	PWY-6123	inosine-5'-phosphate biosynthesis I
RPE_0548	PWY-6124	inosine-5'-phosphate biosynthesis II
RPE_0548	PWY-7234	inosine-5'-phosphate biosynthesis III
RPE_0573	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPE_0573	PWY-5723	Rubisco shunt
RPE_0584	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPE_0585	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPE_0589	PWY-6080	4-ethylphenol degradation (anaerobic)
RPE_0589	PWY-7046	4-coumarate degradation (anaerobic)
RPE_0590	PWY-6080	4-ethylphenol degradation (anaerobic)
RPE_0590	PWY-7046	4-coumarate degradation (anaerobic)
RPE_0591	PWY-6080	4-ethylphenol degradation (anaerobic)
RPE_0591	PWY-7046	4-coumarate degradation (anaerobic)
RPE_0612	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
RPE_0612	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
RPE_0621	PWY-3781	aerobic respiration I (cytochrome c)
RPE_0621	PWY-4521	arsenite oxidation I (respiratory)
RPE_0621	PWY-6692	Fe(II) oxidation
RPE_0621	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPE_0635	PWY-5750	itaconate biosynthesis
RPE_0635	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPE_0635	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
RPE_0647	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPE_0647	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPE_0674	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPE_0674	PWY-5109	2-methylbutanoate biosynthesis
RPE_0674	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RPE_0674	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RPE_0674	PWY-5177	glutaryl-CoA degradation
RPE_0674	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_0674	PWY-6435	4-hydroxybenzoate biosynthesis V
RPE_0674	PWY-6583	pyruvate fermentation to butanol I
RPE_0674	PWY-6863	pyruvate fermentation to hexanol
RPE_0674	PWY-6883	pyruvate fermentation to butanol II
RPE_0674	PWY-6944	androstenedione degradation
RPE_0674	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RPE_0674	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RPE_0674	PWY-7007	methyl ketone biosynthesis
RPE_0674	PWY-7046	4-coumarate degradation (anaerobic)
RPE_0674	PWY-7094	fatty acid salvage
RPE_0674	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RPE_0674	PWY-735	jasmonic acid biosynthesis
RPE_0674	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RPE_0677	PWY-6840	homoglutathione biosynthesis
RPE_0677	PWY-7255	ergothioneine biosynthesis I (bacteria)
RPE_0687	PWY-3801	sucrose degradation II (sucrose synthase)
RPE_0687	PWY-6527	stachyose degradation
RPE_0687	PWY-6981	chitin biosynthesis
RPE_0687	PWY-7238	sucrose biosynthesis II
RPE_0687	PWY-7343	UDP-glucose biosynthesis
RPE_0710	PWY-6785	hydrogen production VIII
RPE_0718	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPE_0718	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPE_0718	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPE_0718	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPE_0721	PWY-5686	UMP biosynthesis
RPE_0736	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPE_0742	PWY-4381	fatty acid biosynthesis initiation I
RPE_0750	PWY-6216	3-chlorobenzoate degradation II (via protocatechuate)
RPE_0750	PWY-6217	3,4-dichlorobenzoate degradation
RPE_0757	PWY-723	alkylnitronates degradation
RPE_0796	PWY-5663	tetrahydrobiopterin biosynthesis I
RPE_0796	PWY-5664	tetrahydrobiopterin biosynthesis II
RPE_0796	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RPE_0796	PWY-6703	preQ<sub>0</sub> biosynthesis
RPE_0796	PWY-6983	tetrahydrobiopterin biosynthesis III
RPE_0796	PWY-7442	drosopterin and aurodrosopterin biosynthesis
RPE_0800	PWY-622	starch biosynthesis
RPE_0801	PWY-622	starch biosynthesis
RPE_0819	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPE_0819	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPE_0843	PWY-6823	molybdenum cofactor biosynthesis
RPE_0845	PWY-6420	pyrroloquinoline quinone biosynthesis
RPE_0897	PWY-6832	2-aminoethylphosphonate degradation II
RPE_0925	PWY-5269	cardiolipin biosynthesis II
RPE_0925	PWY-5668	cardiolipin biosynthesis I
RPE_0927	PWY-6823	molybdenum cofactor biosynthesis
RPE_0932	PWY-6825	phosphatidylcholine biosynthesis V
RPE_0946	PWY-6703	preQ<sub>0</sub> biosynthesis
RPE_0948	PWY-3781	aerobic respiration I (cytochrome c)
RPE_0948	PWY-6692	Fe(II) oxidation
RPE_0948	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
RPE_0948	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPE_0979	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPE_0979	PWY-5686	UMP biosynthesis
RPE_0979	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPE_0981	PWY-1341	phenylacetate degradation II (anaerobic)
RPE_0981	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
RPE_0996	PWY-1341	phenylacetate degradation II (anaerobic)
RPE_0996	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
RPE_1067	PWY-6891	thiazole biosynthesis II (Bacillus)
RPE_1067	PWY-6892	thiazole biosynthesis I (E. coli)
RPE_1067	PWY-7560	methylerythritol phosphate pathway II
RPE_1081	PWY-3821	galactose degradation III
RPE_1081	PWY-6317	galactose degradation I (Leloir pathway)
RPE_1081	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RPE_1081	PWY-6527	stachyose degradation
RPE_1081	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
RPE_1081	PWY-7344	UDP-D-galactose biosynthesis
RPE_1120	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
RPE_1146	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPE_1189	PWY-5941	glycogen degradation II (eukaryotic)
RPE_1189	PWY-6724	starch degradation II
RPE_1189	PWY-6737	starch degradation V
RPE_1189	PWY-7238	sucrose biosynthesis II
RPE_1207	PWY-3781	aerobic respiration I (cytochrome c)
RPE_1207	PWY-6692	Fe(II) oxidation
RPE_1207	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
RPE_1207	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPE_1219	PWY-5169	cyanurate degradation
RPE_1219	PWY-5703	urea degradation I
RPE_1220	PWY-5169	cyanurate degradation
RPE_1220	PWY-5703	urea degradation I
RPE_1220	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPE_1260	PWY-6683	sulfate reduction III (assimilatory)
RPE_1273	PWY-2661	trehalose biosynthesis V
RPE_1281	PWY-2723	trehalose degradation V
RPE_1281	PWY-3801	sucrose degradation II (sucrose synthase)
RPE_1281	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
RPE_1281	PWY-5661	GDP-glucose biosynthesis
RPE_1281	PWY-5661-1	RPE_1281
RPE_1281	PWY-5940	streptomycin biosynthesis
RPE_1281	PWY-5941	glycogen degradation II (eukaryotic)
RPE_1281	PWY-622	starch biosynthesis
RPE_1281	PWY-6731	starch degradation III
RPE_1281	PWY-6737	starch degradation V
RPE_1281	PWY-6749	CMP-legionaminate biosynthesis I
RPE_1281	PWY-7238	sucrose biosynthesis II
RPE_1281	PWY-7343	UDP-glucose biosynthesis
RPE_1305	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPE_1305	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPE_1306	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPE_1306	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPE_1307	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPE_1307	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPE_1312	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPE_1312	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPE_1314	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPE_1314	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPE_1317	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPE_1317	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPE_1327	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
RPE_1328	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
RPE_1328	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPE_1328	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPE_1329	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
RPE_1329	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPE_1329	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPE_1333	PWY-101	photosynthesis light reactions
RPE_1333	PWY-6785	hydrogen production VIII
RPE_1334	PWY-101	photosynthesis light reactions
RPE_1334	PWY-6785	hydrogen production VIII
RPE_1344	PWY-5874	heme degradation
RPE_1344	PWY-5915	phycoerythrobilin biosynthesis I
RPE_1344	PWY-5917	phycocyanobilin biosynthesis
RPE_1344	PWY-7170	phytochromobilin biosynthesis
RPE_1347	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPE_1347	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPE_1348	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPE_1348	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPE_1349	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPE_1349	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPE_1350	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPE_1350	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPE_1351	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPE_1351	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPE_1359	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPE_1359	PWY-7536	2-amino-3-hydroxycyclopent-2-enone biosynthesis
RPE_1361	PWY-5532	adenosine nucleotides degradation IV
RPE_1361	PWY-5723	Rubisco shunt
RPE_1362	PWY-5532	adenosine nucleotides degradation IV
RPE_1362	PWY-5723	Rubisco shunt
RPE_1365	PWY-5344	L-homocysteine biosynthesis
RPE_1365	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RPE_1368	PWY-4041	&gamma;-glutamyl cycle
RPE_1368	PWY-5826	hypoglycin biosynthesis
RPE_1378	PWY-4261	glycerol degradation I
RPE_1378	PWY-6118	glycerol-3-phosphate shuttle
RPE_1378	PWY-6952	glycerophosphodiester degradation
RPE_1395	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_1410	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
RPE_1410	PWY-6167	flavin biosynthesis II (archaea)
RPE_1410	PWY-6168	flavin biosynthesis III (fungi)
RPE_1423	PWY-5057	L-valine degradation II
RPE_1423	PWY-5076	L-leucine degradation III
RPE_1423	PWY-5078	L-isoleucine degradation II
RPE_1423	PWY-5101	L-isoleucine biosynthesis II
RPE_1423	PWY-5103	L-isoleucine biosynthesis III
RPE_1423	PWY-5104	L-isoleucine biosynthesis IV
RPE_1423	PWY-5108	L-isoleucine biosynthesis V
RPE_1427	PWY-3341	L-proline biosynthesis III
RPE_1427	PWY-4981	L-proline biosynthesis II (from arginine)
RPE_1427	PWY-6344	L-ornithine degradation II (Stickland reaction)
RPE_1429	PWY-6167	flavin biosynthesis II (archaea)
RPE_1429	PWY-6168	flavin biosynthesis III (fungi)
RPE_1448	PWY-3821	galactose degradation III
RPE_1448	PWY-6317	galactose degradation I (Leloir pathway)
RPE_1448	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RPE_1448	PWY-6527	stachyose degradation
RPE_1448	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
RPE_1448	PWY-7344	UDP-D-galactose biosynthesis
RPE_1463	PWY-6910	hydroxymethylpyrimidine salvage
RPE_1463	PWY-7356	thiamin salvage IV (yeast)
RPE_1463	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RPE_1478	PWY-101	photosynthesis light reactions
RPE_1478	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
RPE_1508	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPE_1508	PWY-5723	Rubisco shunt
RPE_1513	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
RPE_1516	PWY-3221	dTDP-L-rhamnose biosynthesis II
RPE_1516	PWY-6808	dTDP-D-forosamine biosynthesis
RPE_1516	PWY-6942	dTDP-D-desosamine biosynthesis
RPE_1516	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RPE_1516	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
RPE_1516	PWY-6974	dTDP-L-olivose biosynthesis
RPE_1516	PWY-6976	dTDP-L-mycarose biosynthesis
RPE_1516	PWY-7104	dTDP-L-megosamine biosynthesis
RPE_1516	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
RPE_1516	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
RPE_1516	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
RPE_1516	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
RPE_1516	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
RPE_1516	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
RPE_1516	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
RPE_1516	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
RPE_1517	PWY-6891	thiazole biosynthesis II (Bacillus)
RPE_1517	PWY-6892	thiazole biosynthesis I (E. coli)
RPE_1517	PWY-7560	methylerythritol phosphate pathway II
RPE_1563	PWY-6825	phosphatidylcholine biosynthesis V
RPE_1571	PWY-5392	reductive TCA cycle II
RPE_1571	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPE_1571	PWY-5690	TCA cycle II (plants and fungi)
RPE_1571	PWY-5913	TCA cycle VI (obligate autotrophs)
RPE_1571	PWY-6728	methylaspartate cycle
RPE_1571	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_1571	PWY-7254	TCA cycle VII (acetate-producers)
RPE_1571	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPE_1602	PWY-5913	TCA cycle VI (obligate autotrophs)
RPE_1602	PWY-6549	L-glutamine biosynthesis III
RPE_1602	PWY-6728	methylaspartate cycle
RPE_1602	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_1602	PWY-7124	ethylene biosynthesis V (engineered)
RPE_1602	PWY-7254	TCA cycle VII (acetate-producers)
RPE_1602	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RPE_1607	PWY-6123	inosine-5'-phosphate biosynthesis I
RPE_1607	PWY-6124	inosine-5'-phosphate biosynthesis II
RPE_1607	PWY-7234	inosine-5'-phosphate biosynthesis III
RPE_1608	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPE_1608	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPE_1608	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPE_1610	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPE_1610	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPE_1610	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPE_1613	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPE_1613	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPE_1613	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPE_1635	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPE_1635	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPE_1640	PWY-6123	inosine-5'-phosphate biosynthesis I
RPE_1640	PWY-6124	inosine-5'-phosphate biosynthesis II
RPE_1640	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPE_1640	PWY-7234	inosine-5'-phosphate biosynthesis III
RPE_1642	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPE_1642	PWY-5723	Rubisco shunt
RPE_1644	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPE_1653	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
RPE_1723	PWY-5344	L-homocysteine biosynthesis
RPE_1723	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RPE_1734	PWY-5392	reductive TCA cycle II
RPE_1734	PWY-5537	pyruvate fermentation to acetate V
RPE_1734	PWY-5538	pyruvate fermentation to acetate VI
RPE_1734	PWY-5690	TCA cycle II (plants and fungi)
RPE_1734	PWY-5913	TCA cycle VI (obligate autotrophs)
RPE_1734	PWY-6728	methylaspartate cycle
RPE_1734	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_1734	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPE_1757	PWY-6728	methylaspartate cycle
RPE_1757	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_1757	PWY-7118	chitin degradation to ethanol
RPE_1757	PWY-7294	xylose degradation IV
RPE_1757	PWY-7295	L-arabinose degradation IV
RPE_1761	PWY-5340	sulfate activation for sulfonation
RPE_1763	PWY-5194	siroheme biosynthesis
RPE_1763	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RPE_1765	PWY-6683	sulfate reduction III (assimilatory)
RPE_1791	PWY-1622	formaldehyde assimilation I (serine pathway)
RPE_1791	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPE_1791	PWY-5913	TCA cycle VI (obligate autotrophs)
RPE_1791	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPE_1791	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
RPE_1791	PWY-6549	L-glutamine biosynthesis III
RPE_1791	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPE_1791	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPE_1791	PWY-7124	ethylene biosynthesis V (engineered)
RPE_1796	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPE_1816	PWY-7560	methylerythritol phosphate pathway II
RPE_1820	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
RPE_1820	PWY-7494	choline degradation IV
RPE_1852	PWY-5743	3-hydroxypropanoate cycle
RPE_1852	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_1852	PWY-6728	methylaspartate cycle
RPE_1852	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPE_1853	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RPE_1854	PWY-5743	3-hydroxypropanoate cycle
RPE_1854	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_1854	PWY-6728	methylaspartate cycle
RPE_1854	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPE_1855	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RPE_1855	PWY-6148	tetrahydromethanopterin biosynthesis
RPE_1855	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RPE_1855	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RPE_1856	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RPE_1856	PWY-6148	tetrahydromethanopterin biosynthesis
RPE_1856	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RPE_1856	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RPE_1857	PWY-6614	tetrahydrofolate biosynthesis
RPE_1954	PWY-6654	phosphopantothenate biosynthesis III
RPE_1958	PWY-6695	oxalate degradation II
RPE_1984	PWY-6823	molybdenum cofactor biosynthesis
RPE_1986	PWY-181	photorespiration
RPE_1987	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPE_1987	PWY-5723	Rubisco shunt
RPE_1989	PWY-4081	glutathione redox reactions I
RPE_1991	PWY-6164	3-dehydroquinate biosynthesis I
RPE_1992	PWY-7039	phosphatidate metabolism, as a signaling molecule
RPE_2002	PWY-5101	L-isoleucine biosynthesis II
RPE_2002	PWY-6871	3-methylbutanol biosynthesis
RPE_2005	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPE_2005	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPE_2008	PWY-5669	phosphatidylethanolamine biosynthesis I
RPE_2009	PWY-5669	phosphatidylethanolamine biosynthesis I
RPE_2022	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPE_2022	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPE_2022	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPE_2022	PWY-5994	palmitate biosynthesis I (animals and fungi)
RPE_2022	PWY-6113	superpathway of mycolate biosynthesis
RPE_2022	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPE_2022	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPE_2022	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPE_2022	PWYG-321	mycolate biosynthesis
RPE_2035	PWY-5350	thiosulfate disproportionation III (rhodanese)
RPE_2069	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
RPE_2070	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RPE_2070	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RPE_2070	PWY-6897	thiamin salvage II
RPE_2070	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RPE_2070	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RPE_2070	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
RPE_2070	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RPE_2071	PWY-6891	thiazole biosynthesis II (Bacillus)
RPE_2071	PWY-6892	thiazole biosynthesis I (E. coli)
RPE_2103	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPE_2103	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPE_2104	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RPE_2104	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RPE_2104	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RPE_2105	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPE_2105	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPE_2107	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RPE_2107	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
RPE_2107	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RPE_2107	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RPE_2108	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPE_2108	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPE_2110	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPE_2110	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPE_2113	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPE_2113	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPE_2140	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPE_2140	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPE_2144	PWY-5392	reductive TCA cycle II
RPE_2144	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPE_2144	PWY-5690	TCA cycle II (plants and fungi)
RPE_2144	PWY-5913	TCA cycle VI (obligate autotrophs)
RPE_2144	PWY-6728	methylaspartate cycle
RPE_2144	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_2144	PWY-7254	TCA cycle VII (acetate-producers)
RPE_2144	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPE_2149	PWY-3841	folate transformations II
RPE_2149	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPE_2149	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_2149	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RPE_2149	PWY-7199	pyrimidine deoxyribonucleosides salvage
RPE_2149	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RPE_2150	PWY-3841	folate transformations II
RPE_2150	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPE_2150	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_2150	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RPE_2150	PWY-7199	pyrimidine deoxyribonucleosides salvage
RPE_2150	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RPE_2174	PWY-3841	folate transformations II
RPE_2174	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPE_2174	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_2174	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RPE_2174	PWY-7199	pyrimidine deoxyribonucleosides salvage
RPE_2174	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RPE_2177	PWY-3841	folate transformations II
RPE_2177	PWY-6614	tetrahydrofolate biosynthesis
RPE_2186	PWY-2781	<i>cis</i>-zeatin biosynthesis
RPE_2187	PWY-5101	L-isoleucine biosynthesis II
RPE_2187	PWY-5103	L-isoleucine biosynthesis III
RPE_2187	PWY-5104	L-isoleucine biosynthesis IV
RPE_2187	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
RPE_2187	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RPE_2187	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RPE_2187	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPE_2189	PWY-5101	L-isoleucine biosynthesis II
RPE_2189	PWY-5103	L-isoleucine biosynthesis III
RPE_2189	PWY-5104	L-isoleucine biosynthesis IV
RPE_2189	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
RPE_2189	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RPE_2189	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RPE_2189	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPE_2195	PWY-5101	L-isoleucine biosynthesis II
RPE_2195	PWY-5103	L-isoleucine biosynthesis III
RPE_2195	PWY-5104	L-isoleucine biosynthesis IV
RPE_2195	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPE_2208	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RPE_2209	PWY-6871	3-methylbutanol biosynthesis
RPE_2215	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RPE_2215	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
RPE_2215	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RPE_2215	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RPE_2217	PWY-5194	siroheme biosynthesis
RPE_2217	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RPE_2219	PWY-5194	siroheme biosynthesis
RPE_2219	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RPE_2221	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RPE_2224	PWY-5194	siroheme biosynthesis
RPE_2224	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RPE_2229	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPE_2229	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPE_2229	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPE_2230	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
RPE_2232	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPE_2232	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
RPE_2234	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPE_2234	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPE_2234	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPE_2237	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPE_2237	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPE_2237	PWY-6268	adenosylcobalamin salvage from cobalamin
RPE_2237	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPE_2240	PWY-5443	aminopropanol phosphate biosynthesis I
RPE_2254	PWY-4381	fatty acid biosynthesis initiation I
RPE_2254	PWY-5743	3-hydroxypropanoate cycle
RPE_2254	PWY-5744	glyoxylate assimilation
RPE_2254	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_2254	PWY-6679	jadomycin biosynthesis
RPE_2254	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPE_2261	PWY-5101	L-isoleucine biosynthesis II
RPE_2261	PWY-5103	L-isoleucine biosynthesis III
RPE_2261	PWY-5104	L-isoleucine biosynthesis IV
RPE_2261	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPE_2301	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RPE_2301	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RPE_2301	PWY-6936	seleno-amino acid biosynthesis
RPE_2301	PWY-702	L-methionine biosynthesis II
RPE_2312	PWY-6936	seleno-amino acid biosynthesis
RPE_2312	PWY-7274	D-cycloserine biosynthesis
RPE_2323	PWY-6157	autoinducer AI-1 biosynthesis
RPE_2348	PWY-5663	tetrahydrobiopterin biosynthesis I
RPE_2348	PWY-5664	tetrahydrobiopterin biosynthesis II
RPE_2348	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RPE_2348	PWY-6703	preQ<sub>0</sub> biosynthesis
RPE_2348	PWY-6983	tetrahydrobiopterin biosynthesis III
RPE_2348	PWY-7442	drosopterin and aurodrosopterin biosynthesis
RPE_2359	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RPE_2359	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RPE_2359	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
RPE_2375	PWY-5392	reductive TCA cycle II
RPE_2375	PWY-5537	pyruvate fermentation to acetate V
RPE_2375	PWY-5538	pyruvate fermentation to acetate VI
RPE_2375	PWY-5690	TCA cycle II (plants and fungi)
RPE_2375	PWY-5913	TCA cycle VI (obligate autotrophs)
RPE_2375	PWY-6728	methylaspartate cycle
RPE_2375	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_2375	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPE_2380	PWY-4381	fatty acid biosynthesis initiation I
RPE_2380	PWY-5743	3-hydroxypropanoate cycle
RPE_2380	PWY-5744	glyoxylate assimilation
RPE_2380	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_2380	PWY-6679	jadomycin biosynthesis
RPE_2380	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPE_2382	PWY-5642	2,4-dinitrotoluene degradation
RPE_2382	PWY-6373	acrylate degradation
RPE_2395	PWY-3841	folate transformations II
RPE_2395	PWY-6614	tetrahydrofolate biosynthesis
RPE_2501	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RPE_2501	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPE_2501	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RPE_2501	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RPE_2501	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_2501	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_2501	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPE_2501	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RPE_2505	PWY-381	nitrate reduction II (assimilatory)
RPE_2505	PWY-5675	nitrate reduction V (assimilatory)
RPE_2505	PWY-6549	L-glutamine biosynthesis III
RPE_2505	PWY-6963	ammonia assimilation cycle I
RPE_2505	PWY-6964	ammonia assimilation cycle II
RPE_2507	PWY-6938	NADH repair
RPE_2535	PWY-3781	aerobic respiration I (cytochrome c)
RPE_2535	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RPE_2535	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RPE_2535	PWY-6692	Fe(II) oxidation
RPE_2537	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RPE_2537	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
RPE_2539	PWY-5743	3-hydroxypropanoate cycle
RPE_2539	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_2539	PWY-6728	methylaspartate cycle
RPE_2539	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPE_2559	PWY-7560	methylerythritol phosphate pathway II
RPE_2563	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPE_2563	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPE_2563	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPE_2563	PWY-5994	palmitate biosynthesis I (animals and fungi)
RPE_2563	PWY-6113	superpathway of mycolate biosynthesis
RPE_2563	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPE_2563	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPE_2563	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPE_2563	PWYG-321	mycolate biosynthesis
RPE_2568	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPE_2569	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPE_2572	PWY-6823	molybdenum cofactor biosynthesis
RPE_2593	PWY-1042	glycolysis IV (plant cytosol)
RPE_2593	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPE_2593	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPE_2593	PWY-7003	glycerol degradation to butanol
RPE_2595	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
RPE_2595	PWY-7177	UTP and CTP dephosphorylation II
RPE_2595	PWY-7185	UTP and CTP dephosphorylation I
RPE_2601	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RPE_2601	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
RPE_2602	PWY-101	photosynthesis light reactions
RPE_2602	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
RPE_2606	PWY-6700	queuosine biosynthesis
RPE_2607	PWY-1042	glycolysis IV (plant cytosol)
RPE_2607	PWY-1622	formaldehyde assimilation I (serine pathway)
RPE_2607	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RPE_2607	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPE_2607	PWY-5723	Rubisco shunt
RPE_2607	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPE_2607	PWY-6886	1-butanol autotrophic biosynthesis
RPE_2607	PWY-6901	superpathway of glucose and xylose degradation
RPE_2607	PWY-7003	glycerol degradation to butanol
RPE_2607	PWY-7124	ethylene biosynthesis V (engineered)
RPE_2607	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RPE_2618	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
RPE_2618	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RPE_2678	PWY-31	canavanine degradation
RPE_2678	PWY-4984	urea cycle
RPE_2678	PWY-6305	putrescine biosynthesis IV
RPE_2678	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RPE_2682	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPE_2683	PWY-5723	Rubisco shunt
RPE_2684	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPE_2684	PWY-5723	Rubisco shunt
RPE_2684	PWY-6891	thiazole biosynthesis II (Bacillus)
RPE_2684	PWY-6892	thiazole biosynthesis I (E. coli)
RPE_2684	PWY-6901	superpathway of glucose and xylose degradation
RPE_2684	PWY-7560	methylerythritol phosphate pathway II
RPE_2685	PWY-1042	glycolysis IV (plant cytosol)
RPE_2685	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPE_2685	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPE_2685	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPE_2685	PWY-7385	1,3-propanediol biosynthesis (engineered)
RPE_2686	PWY-5532	adenosine nucleotides degradation IV
RPE_2686	PWY-5723	Rubisco shunt
RPE_2700	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
RPE_2703	PWY-5381	pyridine nucleotide cycling (plants)
RPE_2703	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RPE_2703	PWY-6596	adenosine nucleotides degradation I
RPE_2703	PWY-6606	guanosine nucleotides degradation II
RPE_2703	PWY-6607	guanosine nucleotides degradation I
RPE_2703	PWY-6608	guanosine nucleotides degradation III
RPE_2703	PWY-7185	UTP and CTP dephosphorylation I
RPE_2708	PWY-7158	L-phenylalanine degradation V
RPE_2728	PWY-6936	seleno-amino acid biosynthesis
RPE_2752	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RPE_2752	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
RPE_2752	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
RPE_2755	PWY-7560	methylerythritol phosphate pathway II
RPE_2770	PWY-6700	queuosine biosynthesis
RPE_2771	PWY-6700	queuosine biosynthesis
RPE_2774	PWY-6936	seleno-amino acid biosynthesis
RPE_2785	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RPE_2786	PWY-6749	CMP-legionaminate biosynthesis I
RPE_2798	PWY-6826	phosphatidylcholine biosynthesis VI
RPE_2808	PWY-1622	formaldehyde assimilation I (serine pathway)
RPE_2808	PWY-181	photorespiration
RPE_2808	PWY-2161	folate polyglutamylation
RPE_2808	PWY-2201	folate transformations I
RPE_2808	PWY-3661	glycine betaine degradation I
RPE_2808	PWY-3661-1	glycine betaine degradation II (mammalian)
RPE_2808	PWY-3841	folate transformations II
RPE_2808	PWY-5497	purine nucleobases degradation II (anaerobic)
RPE_2811	PWY-6167	flavin biosynthesis II (archaea)
RPE_2811	PWY-6168	flavin biosynthesis III (fungi)
RPE_2811	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPE_2812	PWY-6167	flavin biosynthesis II (archaea)
RPE_2812	PWY-6168	flavin biosynthesis III (fungi)
RPE_2814	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RPE_2814	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RPE_2814	PWY-6896	thiamin salvage I
RPE_2814	PWY-6897	thiamin salvage II
RPE_2826	PWY-4381	fatty acid biosynthesis initiation I
RPE_2842	PWY-6655	xanthan biosynthesis
RPE_2842	PWY-6658	acetan biosynthesis
RPE_2853	PWY-5344	L-homocysteine biosynthesis
RPE_2853	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RPE_2864	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RPE_2864	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RPE_2865	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RPE_2865	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPE_2865	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_2865	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
RPE_2865	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RPE_2865	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RPE_2884	PWY-6703	preQ<sub>0</sub> biosynthesis
RPE_2912	PWY-4381	fatty acid biosynthesis initiation I
RPE_2912	PWY-5743	3-hydroxypropanoate cycle
RPE_2912	PWY-5744	glyoxylate assimilation
RPE_2912	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_2912	PWY-6679	jadomycin biosynthesis
RPE_2912	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPE_2920	PWY-5386	methylglyoxal degradation I
RPE_2935	PWY-7425	2-chloroacrylate degradation I
RPE_2936	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPE_2944	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPE_2944	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPE_2964	PWY-6823	molybdenum cofactor biosynthesis
RPE_2964	PWY-6891	thiazole biosynthesis II (Bacillus)
RPE_2964	PWY-6892	thiazole biosynthesis I (E. coli)
RPE_2964	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RPE_2969	PWY-6823	molybdenum cofactor biosynthesis
RPE_2969	PWY-6891	thiazole biosynthesis II (Bacillus)
RPE_2969	PWY-6892	thiazole biosynthesis I (E. coli)
RPE_2969	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RPE_2986	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPE_2986	PWY-6416	quinate degradation II
RPE_2986	PWY-6707	gallate biosynthesis
RPE_3009	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPE_3009	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPE_3024	PWY-6012	acyl carrier protein metabolism I
RPE_3024	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
RPE_3032	PWY-2941	L-lysine biosynthesis II
RPE_3032	PWY-2942	L-lysine biosynthesis III
RPE_3032	PWY-5097	L-lysine biosynthesis VI
RPE_3057	PWY-1042	glycolysis IV (plant cytosol)
RPE_3057	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RPE_3057	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPE_3057	PWY-5723	Rubisco shunt
RPE_3057	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPE_3057	PWY-6886	1-butanol autotrophic biosynthesis
RPE_3057	PWY-6901	superpathway of glucose and xylose degradation
RPE_3057	PWY-7003	glycerol degradation to butanol
RPE_3057	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RPE_3057	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPE_3067	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
RPE_3068	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
RPE_3095	PWY-6748	nitrate reduction VII (denitrification)
RPE_3095	PWY-7084	nitrifier denitrification
RPE_3101	PWY-5480	pyruvate fermentation to ethanol I
RPE_3101	PWY-5485	pyruvate fermentation to acetate IV
RPE_3101	PWY-5493	reductive monocarboxylic acid cycle
RPE_3103	PWY-5532	adenosine nucleotides degradation IV
RPE_3104	PWY-7399	methylphosphonate degradation II
RPE_3105	PWY-7399	methylphosphonate degradation II
RPE_3107	PWY-7399	methylphosphonate degradation II
RPE_3110	PWY-7399	methylphosphonate degradation II
RPE_3117	PWY-7399	methylphosphonate degradation II
RPE_3118	PWY-5532	adenosine nucleotides degradation IV
RPE_3123	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPE_3123	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPE_3123	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPE_3136	PWY-6966	methanol oxidation to formaldehyde I
RPE_3162	PWY-5482	pyruvate fermentation to acetate II
RPE_3162	PWY-5485	pyruvate fermentation to acetate IV
RPE_3162	PWY-5497	purine nucleobases degradation II (anaerobic)
RPE_3163	PWY-1281	sulfoacetaldehyde degradation I
RPE_3163	PWY-5482	pyruvate fermentation to acetate II
RPE_3163	PWY-5485	pyruvate fermentation to acetate IV
RPE_3163	PWY-5497	purine nucleobases degradation II (anaerobic)
RPE_3163	PWY-6637	sulfolactate degradation II
RPE_3164	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPE_3164	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPE_3164	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPE_3164	PWY-6113	superpathway of mycolate biosynthesis
RPE_3164	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPE_3164	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPE_3164	PWY-7096	triclosan resistance
RPE_3164	PWYG-321	mycolate biosynthesis
RPE_3169	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RPE_3169	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RPE_3169	PWY-6936	seleno-amino acid biosynthesis
RPE_3169	PWY-702	L-methionine biosynthesis II
RPE_3176	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_3176	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_3176	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_3177	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RPE_3177	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPE_3177	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RPE_3177	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RPE_3177	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_3177	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_3177	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPE_3177	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RPE_3186	PWY-6823	molybdenum cofactor biosynthesis
RPE_3186	PWY-6891	thiazole biosynthesis II (Bacillus)
RPE_3186	PWY-6892	thiazole biosynthesis I (E. coli)
RPE_3186	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RPE_3201	PWY-1281	sulfoacetaldehyde degradation I
RPE_3201	PWY-6637	sulfolactate degradation II
RPE_3202	PWY-5392	reductive TCA cycle II
RPE_3202	PWY-5537	pyruvate fermentation to acetate V
RPE_3202	PWY-5538	pyruvate fermentation to acetate VI
RPE_3202	PWY-5690	TCA cycle II (plants and fungi)
RPE_3202	PWY-5913	TCA cycle VI (obligate autotrophs)
RPE_3202	PWY-6728	methylaspartate cycle
RPE_3202	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_3202	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPE_3203	PWY-5392	reductive TCA cycle II
RPE_3203	PWY-5537	pyruvate fermentation to acetate V
RPE_3203	PWY-5538	pyruvate fermentation to acetate VI
RPE_3203	PWY-5690	TCA cycle II (plants and fungi)
RPE_3203	PWY-5913	TCA cycle VI (obligate autotrophs)
RPE_3203	PWY-6728	methylaspartate cycle
RPE_3203	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_3203	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPE_3210	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPE_3210	PWY-5109	2-methylbutanoate biosynthesis
RPE_3210	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RPE_3210	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RPE_3210	PWY-5177	glutaryl-CoA degradation
RPE_3210	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_3210	PWY-6435	4-hydroxybenzoate biosynthesis V
RPE_3210	PWY-6583	pyruvate fermentation to butanol I
RPE_3210	PWY-6863	pyruvate fermentation to hexanol
RPE_3210	PWY-6883	pyruvate fermentation to butanol II
RPE_3210	PWY-6944	androstenedione degradation
RPE_3210	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RPE_3210	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RPE_3210	PWY-7007	methyl ketone biosynthesis
RPE_3210	PWY-7046	4-coumarate degradation (anaerobic)
RPE_3210	PWY-7094	fatty acid salvage
RPE_3210	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RPE_3210	PWY-735	jasmonic acid biosynthesis
RPE_3210	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RPE_3224	PWY-5743	3-hydroxypropanoate cycle
RPE_3224	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_3224	PWY-6728	methylaspartate cycle
RPE_3224	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPE_3225	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPE_3225	PWY-5109	2-methylbutanoate biosynthesis
RPE_3225	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RPE_3225	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RPE_3225	PWY-5177	glutaryl-CoA degradation
RPE_3225	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_3225	PWY-6435	4-hydroxybenzoate biosynthesis V
RPE_3225	PWY-6583	pyruvate fermentation to butanol I
RPE_3225	PWY-6863	pyruvate fermentation to hexanol
RPE_3225	PWY-6883	pyruvate fermentation to butanol II
RPE_3225	PWY-6944	androstenedione degradation
RPE_3225	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RPE_3225	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RPE_3225	PWY-7007	methyl ketone biosynthesis
RPE_3225	PWY-7046	4-coumarate degradation (anaerobic)
RPE_3225	PWY-7094	fatty acid salvage
RPE_3225	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RPE_3225	PWY-735	jasmonic acid biosynthesis
RPE_3225	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RPE_3262	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RPE_3268	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RPE_3268	PWY-6596	adenosine nucleotides degradation I
RPE_3268	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RPE_3275	PWY-1281	sulfoacetaldehyde degradation I
RPE_3275	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPE_3275	PWY-5482	pyruvate fermentation to acetate II
RPE_3275	PWY-5485	pyruvate fermentation to acetate IV
RPE_3275	PWY-5497	purine nucleobases degradation II (anaerobic)
RPE_3275	PWY-6637	sulfolactate degradation II
RPE_3275	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPE_3283	PWY-5269	cardiolipin biosynthesis II
RPE_3283	PWY-5668	cardiolipin biosynthesis I
RPE_3284	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPE_3284	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPE_3284	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPE_3285	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPE_3285	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
RPE_3287	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RPE_3287	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
RPE_3287	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPE_3287	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_3287	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
RPE_3287	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RPE_3287	PWY-7205	CMP phosphorylation
RPE_3287	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RPE_3287	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_3287	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RPE_3287	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_3287	PWY-7224	purine deoxyribonucleosides salvage
RPE_3287	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPE_3287	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RPE_3291	PWY-5988	wound-induced proteolysis I
RPE_3291	PWY-6018	seed germination protein turnover
RPE_3301	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RPE_3306	PWY-5367	petroselinate biosynthesis
RPE_3306	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPE_3306	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPE_3306	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPE_3306	PWY-5994	palmitate biosynthesis I (animals and fungi)
RPE_3306	PWY-6113	superpathway of mycolate biosynthesis
RPE_3306	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPE_3306	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPE_3306	PWY-6951	RPE_3306
RPE_3306	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
RPE_3306	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPE_3306	PWYG-321	mycolate biosynthesis
RPE_3307	PWY-4381	fatty acid biosynthesis initiation I
RPE_3307	PWY-6799	fatty acid biosynthesis (plant mitochondria)
RPE_3307	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPE_3334	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPE_3340	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPE_3340	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPE_3340	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPE_3340	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RPE_3348	PWY-6654	phosphopantothenate biosynthesis III
RPE_3358	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPE_3363	PWY-723	alkylnitronates degradation
RPE_3365	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
RPE_3365	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
RPE_3372	PWY-6454	vancomycin resistance I
RPE_3372	PWY-6455	vancomycin resistance II
RPE_3373	PWY-5686	UMP biosynthesis
RPE_3374	PWY-5686	UMP biosynthesis
RPE_3401	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RPE_3429	PWY-5392	reductive TCA cycle II
RPE_3429	PWY-6038	citrate degradation
RPE_3430	PWY-6038	citrate degradation
RPE_3432	PWY-5796	malonate decarboxylase activation
RPE_3436	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RPE_3436	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
RPE_3438	PWY-6339	syringate degradation
RPE_3492	PWY-6749	CMP-legionaminate biosynthesis I
RPE_3497	PWY-5659	GDP-mannose biosynthesis
RPE_3497	PWY-6073	alginate biosynthesis I (algal)
RPE_3497	PWY-6082	alginate biosynthesis II (bacterial)
RPE_3497	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
RPE_3505	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
RPE_3541	PWY-4381	fatty acid biosynthesis initiation I
RPE_3541	PWY-5743	3-hydroxypropanoate cycle
RPE_3541	PWY-5744	glyoxylate assimilation
RPE_3541	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_3541	PWY-6679	jadomycin biosynthesis
RPE_3541	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPE_3559	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RPE_3565	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPE_3624	PWY-6936	seleno-amino acid biosynthesis
RPE_3644	PWY-5941	glycogen degradation II (eukaryotic)
RPE_3644	PWY-6724	starch degradation II
RPE_3644	PWY-6737	starch degradation V
RPE_3644	PWY-7238	sucrose biosynthesis II
RPE_3658	PWY-4202	arsenate detoxification I (glutaredoxin)
RPE_3658	PWY-4621	arsenate detoxification II (glutaredoxin)
RPE_3676	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPE_3676	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPE_3678	PWY-5532	adenosine nucleotides degradation IV
RPE_3678	PWY-5723	Rubisco shunt
RPE_3688	PWY-5101	L-isoleucine biosynthesis II
RPE_3688	PWY-5103	L-isoleucine biosynthesis III
RPE_3688	PWY-5104	L-isoleucine biosynthesis IV
RPE_3688	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPE_3692	PWY-3162	L-tryptophan degradation V (side chain pathway)
RPE_3692	PWY-5057	L-valine degradation II
RPE_3692	PWY-5076	L-leucine degradation III
RPE_3692	PWY-5078	L-isoleucine degradation II
RPE_3692	PWY-5079	L-phenylalanine degradation III
RPE_3692	PWY-5082	L-methionine degradation III
RPE_3692	PWY-5162	2-oxopentenoate degradation
RPE_3692	PWY-5436	L-threonine degradation IV
RPE_3692	PWY-5480	pyruvate fermentation to ethanol I
RPE_3692	PWY-5486	pyruvate fermentation to ethanol II
RPE_3692	PWY-5751	phenylethanol biosynthesis
RPE_3692	PWY-6028	acetoin degradation
RPE_3692	PWY-6313	serotonin degradation
RPE_3692	PWY-6333	acetaldehyde biosynthesis I
RPE_3692	PWY-6342	noradrenaline and adrenaline degradation
RPE_3692	PWY-6587	pyruvate fermentation to ethanol III
RPE_3692	PWY-6802	salidroside biosynthesis
RPE_3692	PWY-6871	3-methylbutanol biosynthesis
RPE_3692	PWY-7013	L-1,2-propanediol degradation
RPE_3692	PWY-7085	triethylamine degradation
RPE_3692	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPE_3692	PWY-7118	chitin degradation to ethanol
RPE_3692	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
RPE_3692	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RPE_3692	PWY-7557	dehydrodiconiferyl alcohol degradation
RPE_3704	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPE_3708	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPE_3708	PWY-3801	sucrose degradation II (sucrose synthase)
RPE_3708	PWY-5054	sorbitol biosynthesis I
RPE_3708	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
RPE_3708	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RPE_3708	PWY-5659	GDP-mannose biosynthesis
RPE_3708	PWY-5723	Rubisco shunt
RPE_3708	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPE_3708	PWY-621	sucrose degradation III (sucrose invertase)
RPE_3708	PWY-622	starch biosynthesis
RPE_3708	PWY-6531	mannitol cycle
RPE_3708	PWY-6981	chitin biosynthesis
RPE_3708	PWY-7238	sucrose biosynthesis II
RPE_3708	PWY-7347	sucrose biosynthesis III
RPE_3708	PWY-7385	1,3-propanediol biosynthesis (engineered)
RPE_3710	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RPE_3711	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RPE_3711	PWY-6855	chitin degradation I (archaea)
RPE_3711	PWY-6906	chitin derivatives degradation
RPE_3712	PWY-5530	sorbitol biosynthesis II
RPE_3712	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPE_3715	PWY-5941	glycogen degradation II (eukaryotic)
RPE_3715	PWY-6724	starch degradation II
RPE_3715	PWY-6737	starch degradation V
RPE_3715	PWY-7238	sucrose biosynthesis II
RPE_3717	PWY-2622	trehalose biosynthesis IV
RPE_3718	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
RPE_3718	PWY-622	starch biosynthesis
RPE_3721	PWY-2661	trehalose biosynthesis V
RPE_3728	PWY-5964	guanylyl molybdenum cofactor biosynthesis
RPE_3732	PWY-5704	urea degradation II
RPE_3734	PWY-5704	urea degradation II
RPE_3735	PWY-5704	urea degradation II
RPE_3758	PWY-5988	wound-induced proteolysis I
RPE_3758	PWY-6018	seed germination protein turnover
RPE_3769	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RPE_3769	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
RPE_3770	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
RPE_3772	PWY-2201	folate transformations I
RPE_3772	PWY-3841	folate transformations II
RPE_3773	PWY-2201	folate transformations I
RPE_3773	PWY-3841	folate transformations II
RPE_3774	PWY-4261	glycerol degradation I
RPE_3780	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPE_3780	PWY-5109	2-methylbutanoate biosynthesis
RPE_3780	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RPE_3780	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RPE_3780	PWY-5177	glutaryl-CoA degradation
RPE_3780	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_3780	PWY-6435	4-hydroxybenzoate biosynthesis V
RPE_3780	PWY-6583	pyruvate fermentation to butanol I
RPE_3780	PWY-6863	pyruvate fermentation to hexanol
RPE_3780	PWY-6883	pyruvate fermentation to butanol II
RPE_3780	PWY-6944	androstenedione degradation
RPE_3780	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RPE_3780	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RPE_3780	PWY-7007	methyl ketone biosynthesis
RPE_3780	PWY-7046	4-coumarate degradation (anaerobic)
RPE_3780	PWY-7094	fatty acid salvage
RPE_3780	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RPE_3780	PWY-735	jasmonic acid biosynthesis
RPE_3780	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RPE_3808	PWY-6215	4-chlorobenzoate degradation
RPE_3811	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RPE_3811	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RPE_3840	PWY-6854	ethylene biosynthesis III (microbes)
RPE_3845	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPE_3845	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPE_3845	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPE_3848	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPE_3848	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPE_3848	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPE_3862	PWY-5482	pyruvate fermentation to acetate II
RPE_3862	PWY-5485	pyruvate fermentation to acetate IV
RPE_3862	PWY-5497	purine nucleobases degradation II (anaerobic)
RPE_3863	PWY-1281	sulfoacetaldehyde degradation I
RPE_3863	PWY-5482	pyruvate fermentation to acetate II
RPE_3863	PWY-5485	pyruvate fermentation to acetate IV
RPE_3863	PWY-5497	purine nucleobases degradation II (anaerobic)
RPE_3863	PWY-6637	sulfolactate degradation II
RPE_3866	PWY-3781	aerobic respiration I (cytochrome c)
RPE_3866	PWY-4521	arsenite oxidation I (respiratory)
RPE_3866	PWY-6692	Fe(II) oxidation
RPE_3866	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPE_3879	PWY-4041	&gamma;-glutamyl cycle
RPE_3905	PWY-282	cuticular wax biosynthesis
RPE_3915	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
RPE_3915	PWY-7494	choline degradation IV
RPE_3960	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPE_3960	PWY-5686	UMP biosynthesis
RPE_3960	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPE_3977	PWY-3781	aerobic respiration I (cytochrome c)
RPE_3977	PWY-6692	Fe(II) oxidation
RPE_3977	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
RPE_3977	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPE_4071	PWY-6523	nitrite-dependent anaerobic methane oxidation
RPE_4071	PWY-6748	nitrate reduction VII (denitrification)
RPE_4071	PWY-7084	nitrifier denitrification
RPE_4089	PWY-6123	inosine-5'-phosphate biosynthesis I
RPE_4089	PWY-7234	inosine-5'-phosphate biosynthesis III
RPE_4099	PWY-3781	aerobic respiration I (cytochrome c)
RPE_4099	PWY-4521	arsenite oxidation I (respiratory)
RPE_4099	PWY-6692	Fe(II) oxidation
RPE_4099	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPE_4110	PWY-1042	glycolysis IV (plant cytosol)
RPE_4110	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RPE_4110	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPE_4110	PWY-5723	Rubisco shunt
RPE_4110	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPE_4110	PWY-6886	1-butanol autotrophic biosynthesis
RPE_4110	PWY-6901	superpathway of glucose and xylose degradation
RPE_4110	PWY-7003	glycerol degradation to butanol
RPE_4110	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RPE_4110	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPE_4129	PWY-702	L-methionine biosynthesis II
RPE_4130	PWY-7560	methylerythritol phosphate pathway II
RPE_4141	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPE_4149	PWY-7181	pyrimidine deoxyribonucleosides degradation
RPE_4168	PWY-6749	CMP-legionaminate biosynthesis I
RPE_4171	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPE_4203	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RPE_4204	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RPE_4204	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
RPE_4206	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
RPE_4209	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RPE_4209	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RPE_4209	PWY-6936	seleno-amino acid biosynthesis
RPE_4209	PWY-702	L-methionine biosynthesis II
RPE_4217	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RPE_4217	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RPE_4217	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RPE_4219	PWY-2201	folate transformations I
RPE_4219	PWY-5497	purine nucleobases degradation II (anaerobic)
RPE_4220	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPE_4220	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPE_4238	PWY-6891	thiazole biosynthesis II (Bacillus)
RPE_4238	PWY-6892	thiazole biosynthesis I (E. coli)
RPE_4238	PWY-7560	methylerythritol phosphate pathway II
RPE_4239	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RPE_4239	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
RPE_4240	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RPE_4240	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
RPE_4253	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
RPE_4253	PWY-5940	streptomycin biosynthesis
RPE_4254	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
RPE_4261	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
RPE_4261	PWY-5739	GDP-D-perosamine biosynthesis
RPE_4261	PWY-5740	GDP-L-colitose biosynthesis
RPE_4261	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
RPE_4269	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPE_4271	PWY-3821	galactose degradation III
RPE_4271	PWY-6317	galactose degradation I (Leloir pathway)
RPE_4271	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RPE_4271	PWY-6527	stachyose degradation
RPE_4271	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
RPE_4271	PWY-7344	UDP-D-galactose biosynthesis
RPE_4272	PWY-5659	GDP-mannose biosynthesis
RPE_4272	PWY-6073	alginate biosynthesis I (algal)
RPE_4272	PWY-6082	alginate biosynthesis II (bacterial)
RPE_4272	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
RPE_4278	PWY-6749	CMP-legionaminate biosynthesis I
RPE_4317	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
RPE_4317	PWY-6853	ethylene biosynthesis II (microbes)
RPE_4317	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RPE_4340	PWY-5344	L-homocysteine biosynthesis
RPE_4341	PWY-3461	L-tyrosine biosynthesis II
RPE_4341	PWY-3462	L-phenylalanine biosynthesis II
RPE_4341	PWY-6120	L-tyrosine biosynthesis III
RPE_4341	PWY-6627	salinosporamide A biosynthesis
RPE_4357	PWY-6167	flavin biosynthesis II (archaea)
RPE_4357	PWY-6168	flavin biosynthesis III (fungi)
RPE_4357	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RPE_4363	PWY-5101	L-isoleucine biosynthesis II
RPE_4363	PWY-5103	L-isoleucine biosynthesis III
RPE_4363	PWY-5104	L-isoleucine biosynthesis IV
RPE_4363	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPE_4366	PWY-5381	pyridine nucleotide cycling (plants)
RPE_4374	PWY-5451	acetone degradation I (to methylglyoxal)
RPE_4374	PWY-6588	pyruvate fermentation to acetone
RPE_4374	PWY-6876	isopropanol biosynthesis
RPE_4374	PWY-7466	acetone degradation III (to propane-1,2-diol)
RPE_4381	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPE_4381	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPE_4389	PWY-5686	UMP biosynthesis
RPE_4400	PWY-5316	nicotine biosynthesis
RPE_4400	PWY-7342	superpathway of nicotine biosynthesis
RPE_4401	PWY-5316	nicotine biosynthesis
RPE_4401	PWY-7342	superpathway of nicotine biosynthesis
RPE_4402	PWY-5316	nicotine biosynthesis
RPE_4402	PWY-5381	pyridine nucleotide cycling (plants)
RPE_4402	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
RPE_4402	PWY-7342	superpathway of nicotine biosynthesis
RPE_4405	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPE_4405	PWY-6549	L-glutamine biosynthesis III
RPE_4405	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPE_4405	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPE_4419	PWY-7560	methylerythritol phosphate pathway II
RPE_4447	PWY-5958	acridone alkaloid biosynthesis
RPE_4447	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RPE_4447	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RPE_4468	PWY-6098	diploterol and cycloartenol biosynthesis
RPE_4468	PWY-7072	hopanoid biosynthesis (bacteria)
RPE_4488	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPE_4488	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPE_4520	PWY-3081	L-lysine biosynthesis V
RPE_4520	PWY-6871	3-methylbutanol biosynthesis
RPE_4521	PWY-6823	molybdenum cofactor biosynthesis
RPE_4521	PWY-6891	thiazole biosynthesis II (Bacillus)
RPE_4521	PWY-6892	thiazole biosynthesis I (E. coli)
RPE_4521	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RPE_4541	PWY-6823	molybdenum cofactor biosynthesis
RPE_4589	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPE_4591	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPE_4591	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPE_4591	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPE_4591	PWY-6113	superpathway of mycolate biosynthesis
RPE_4591	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPE_4591	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPE_4591	PWY-7096	triclosan resistance
RPE_4591	PWYG-321	mycolate biosynthesis
RPE_4594	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RPE_4594	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RPE_4612	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPE_4612	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPE_4612	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPE_4618	PWY-2723	trehalose degradation V
RPE_4618	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RPE_4618	PWY-5661	GDP-glucose biosynthesis
RPE_4618	PWY-7238	sucrose biosynthesis II
RPE_4618	PWY-7385	1,3-propanediol biosynthesis (engineered)
RPE_4619	PWY-3121	linamarin degradation
RPE_4619	PWY-5176	coumarin biosynthesis (via 2-coumarate)
RPE_4619	PWY-6002	lotaustralin degradation
RPE_4619	PWY-6788	cellulose degradation II (fungi)
RPE_4619	PWY-7089	taxiphyllin bioactivation
RPE_4619	PWY-7091	linustatin bioactivation
RPE_4619	PWY-7092	neolinustatin bioactivation
RPE_4647	PWY-1881	formate oxidation to CO<sub>2</sub>
RPE_4647	PWY-5497	purine nucleobases degradation II (anaerobic)
RPE_4647	PWY-6696	oxalate degradation III
RPE_4678	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RPE_4678	PWY-3162	L-tryptophan degradation V (side chain pathway)
RPE_4678	PWY-5057	L-valine degradation II
RPE_4678	PWY-5076	L-leucine degradation III
RPE_4678	PWY-5078	L-isoleucine degradation II
RPE_4678	PWY-5079	L-phenylalanine degradation III
RPE_4678	PWY-5082	L-methionine degradation III
RPE_4678	PWY-5480	pyruvate fermentation to ethanol I
RPE_4678	PWY-5486	pyruvate fermentation to ethanol II
RPE_4678	PWY-5751	phenylethanol biosynthesis
RPE_4678	PWY-6028	acetoin degradation
RPE_4678	PWY-6313	serotonin degradation
RPE_4678	PWY-6333	acetaldehyde biosynthesis I
RPE_4678	PWY-6342	noradrenaline and adrenaline degradation
RPE_4678	PWY-6587	pyruvate fermentation to ethanol III
RPE_4678	PWY-6802	salidroside biosynthesis
RPE_4678	PWY-6871	3-methylbutanol biosynthesis
RPE_4678	PWY-7013	L-1,2-propanediol degradation
RPE_4678	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPE_4678	PWY-7118	chitin degradation to ethanol
RPE_4678	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RPE_4678	PWY-7557	dehydrodiconiferyl alcohol degradation
RPE_4679	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RPE_4680	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RPE_4693	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPE_4693	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPE_4694	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPE_4694	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPE_4719	PWY-2301	<i>myo</i>-inositol biosynthesis
RPE_4719	PWY-4702	phytate degradation I
RPE_4719	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
RPE_4721	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RPE_4721	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RPE_4721	PWY-6897	thiamin salvage II
RPE_4721	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RPE_4721	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RPE_4721	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
RPE_4721	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RPE_4722	PWY-1042	glycolysis IV (plant cytosol)
RPE_4722	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPE_4722	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPE_4722	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPE_4722	PWY-7385	1,3-propanediol biosynthesis (engineered)
RPE_4725	PWY-1042	glycolysis IV (plant cytosol)
RPE_4725	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPE_4725	PWY-6886	1-butanol autotrophic biosynthesis
RPE_4725	PWY-6901	superpathway of glucose and xylose degradation
RPE_4725	PWY-7003	glycerol degradation to butanol
RPE_4728	PWY-1042	glycolysis IV (plant cytosol)
RPE_4728	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPE_4728	PWY-6901	superpathway of glucose and xylose degradation
RPE_4728	PWY-7003	glycerol degradation to butanol
RPE_4729	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPE_4729	PWY-5723	Rubisco shunt
RPE_4729	PWY-6891	thiazole biosynthesis II (Bacillus)
RPE_4729	PWY-6892	thiazole biosynthesis I (E. coli)
RPE_4729	PWY-6901	superpathway of glucose and xylose degradation
RPE_4729	PWY-7560	methylerythritol phosphate pathway II
RPE_4752	PWY-3781	aerobic respiration I (cytochrome c)
RPE_4752	PWY-4521	arsenite oxidation I (respiratory)
RPE_4752	PWY-6692	Fe(II) oxidation
RPE_4752	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPE_4787	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPE_4787	PWY-7536	2-amino-3-hydroxycyclopent-2-enone biosynthesis
RPE_4815	PWY-5381	pyridine nucleotide cycling (plants)
RPE_4822	PWY-5686	UMP biosynthesis
RPE_4826	PWY-5941	glycogen degradation II (eukaryotic)
RPE_4826	PWY-622	starch biosynthesis
RPE_4826	PWY-6731	starch degradation III
RPE_4826	PWY-6737	starch degradation V
RPE_4826	PWY-7238	sucrose biosynthesis II
RPE_4840	PWY-2941	L-lysine biosynthesis II
RPE_4840	PWY-2942	L-lysine biosynthesis III
RPE_4840	PWY-5097	L-lysine biosynthesis VI
RPE_4842	PWY-4983	L-citrulline-nitric oxide cycle
RPE_4842	PWY-4984	urea cycle
RPE_4842	PWY-5	canavanine biosynthesis
RPE_4842	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPE_4842	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPE_4847	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPE_4847	PWY-5109	2-methylbutanoate biosynthesis
RPE_4847	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RPE_4847	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RPE_4847	PWY-5177	glutaryl-CoA degradation
RPE_4847	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_4847	PWY-6435	4-hydroxybenzoate biosynthesis V
RPE_4847	PWY-6583	pyruvate fermentation to butanol I
RPE_4847	PWY-6863	pyruvate fermentation to hexanol
RPE_4847	PWY-6883	pyruvate fermentation to butanol II
RPE_4847	PWY-6944	androstenedione degradation
RPE_4847	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RPE_4847	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RPE_4847	PWY-7007	methyl ketone biosynthesis
RPE_4847	PWY-7046	4-coumarate degradation (anaerobic)
RPE_4847	PWY-7094	fatty acid salvage
RPE_4847	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RPE_4847	PWY-735	jasmonic acid biosynthesis
RPE_4847	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RPE_4850	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPE_4850	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPE_4850	PWY-6268	adenosylcobalamin salvage from cobalamin
RPE_4850	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPE_4876	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_4883	PWY-4981	L-proline biosynthesis II (from arginine)
RPE_4883	PWY-4984	urea cycle
RPE_4883	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPE_4906	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
RPE_4906	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
