RPE_0001	SSF48295	TrpR-like
RPE_0001	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0002	SSF55979	DNA clamp
RPE_0003	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0005	SSF54211	Ribosomal protein S5 domain 2-like
RPE_0005	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_0005	SSF56719	Type II DNA topoisomerase
RPE_0006	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_0008	SSF46785	"Winged helix" DNA-binding domain
RPE_0008	SSF54909	Dimeric alpha+beta barrel
RPE_0012	SSF55008	HMA, heavy metal-associated domain
RPE_0012	SSF56784	HAD-like
RPE_0012	SSF81653	Calcium ATPase, transduction domain A
RPE_0012	SSF81665	Calcium ATPase, transmembrane domain M
RPE_0014	SSF54862	4Fe-4S ferredoxins
RPE_0015	SSF46626	Cytochrome c
RPE_0017	SSF46626	Cytochrome c
RPE_0018	SSF81442	Cytochrome c oxidase subunit I-like
RPE_0019	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_0019	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0020	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0021	SSF52833	Thioredoxin-like
RPE_0022	SSF47616	GST C-terminal domain-like
RPE_0022	SSF52833	Thioredoxin-like
RPE_0023	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0024	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPE_0025	SSF103473	MFS general substrate transporter
RPE_0026	SSF52335	Methylglyoxal synthase-like
RPE_0026	SSF53927	Cytidine deaminase-like
RPE_0028	SSF48013	NusB-like
RPE_0028	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_0031	SSF47413	lambda repressor-like DNA-binding domains
RPE_0032	SSF50199	Staphylococcal nuclease
RPE_0033	SSF53649	Alkaline phosphatase-like
RPE_0034	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_0034	SSF69864	Argininosuccinate synthetase, C-terminal domain
RPE_0035	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
RPE_0037	SSF109604	HD-domain/PDEase-like
RPE_0038	SSF102114	Radical SAM enzymes
RPE_0040	SSF50129	GroES-like
RPE_0040	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0041	SSF51905	FAD/NAD(P)-binding domain
RPE_0041	SSF54373	FAD-linked reductases, C-terminal domain
RPE_0043	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_0044	SSF50324	Inorganic pyrophosphatase
RPE_0045	SSF53187	Zn-dependent exopeptidases
RPE_0045	SSF55031	Bacterial exopeptidase dimerisation domain
RPE_0046	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_0047	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0047	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RPE_0048	SSF69786	YggU-like
RPE_0052	SSF54427	NTF2-like
RPE_0053	SSF52317	Class I glutamine amidotransferase-like
RPE_0054	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0055	SSF158682	TerB-like
RPE_0056	SSF55073	Nucleotide cyclase
RPE_0057	SSF48264	Cytochrome P450
RPE_0058	SSF103473	MFS general substrate transporter
RPE_0060	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0060	SSF52980	Restriction endonuclease-like
RPE_0062	SSF48452	TPR-like
RPE_0064	SSF69618	HemD-like
RPE_0065	SSF53067	Actin-like ATPase domain
RPE_0066	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_0066	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0067	SSF88697	PUA domain-like
RPE_0068	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_0069	SSF56801	Acetyl-CoA synthetase-like
RPE_0070	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_0071	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_0073	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_0073	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_0074	SSF49777	PEBP-like
RPE_0078	SSF53067	Actin-like ATPase domain
RPE_0080	SSF48613	Heme oxygenase-like
RPE_0081	SSF48264	Cytochrome P450
RPE_0082	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_0083	SSF50199	Staphylococcal nuclease
RPE_0083	SSF57884	Ada DNA repair protein, N-terminal domain (N-Ada 10)
RPE_0084	SSF54001	Cysteine proteinases
RPE_0085	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_0086	SSF54001	Cysteine proteinases
RPE_0090	SSF141868	EAL domain-like
RPE_0090	SSF55073	Nucleotide cyclase
RPE_0090	SSF55785	PYP-like sensor domain (PAS domain)
RPE_0091	SSF55166	Hedgehog/DD-peptidase
RPE_0093	SSF56176	FAD-binding/transporter-associated domain-like
RPE_0094	SSF55920	Creatinase/aminopeptidase
RPE_0099	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_0101	SSF100939	SPOC domain-like
RPE_0103	SSF102712	JAB1/MPN domain
RPE_0103	SSF47781	RuvA domain 2-like
RPE_0104	SSF50882	beta-Barrel protease inhibitors
RPE_0105	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0105	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RPE_0106	SSF161098	MetI-like
RPE_0107	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0108	SSF53850	Periplasmic binding protein-like II
RPE_0109	SSF102215	Creatininase
RPE_0111	SSF51395	FMN-linked oxidoreductases
RPE_0112	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_0113	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPE_0113	SSF53623	MurD-like peptide ligases, catalytic domain
RPE_0114	SSF50129	GroES-like
RPE_0114	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0115	SSF48452	TPR-like
RPE_0115	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_0116	SSF140804	YidB-like
RPE_0118	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0119	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_0119	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_0120	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_0121	SSF52096	ClpP/crotonase
RPE_0122	SSF50199	Staphylococcal nuclease
RPE_0124	SSF141259	CarD-like
RPE_0125	SSF54862	4Fe-4S ferredoxins
RPE_0126	SSF55174	Alpha-L RNA-binding motif
RPE_0127	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0129	SSF143800	L28p-like
RPE_0130	SSF103190	Sensory domain-like
RPE_0130	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_0130	SSF52172	CheY-like
RPE_0130	SSF55785	PYP-like sensor domain (PAS domain)
RPE_0130	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_0132	SSF53300	vWA-like
RPE_0135	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0137	SSF46565	Chaperone J-domain
RPE_0138	SSF82657	BolA-like
RPE_0139	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_0140	SSF52096	ClpP/crotonase
RPE_0141	SSF56349	DNA breaking-rejoining enzymes
RPE_0143	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0144	SSF56796	Dehydroquinate synthase-like
RPE_0145	SSF54631	CBS-domain pair
RPE_0145	SSF56176	FAD-binding/transporter-associated domain-like
RPE_0146	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0146	SSF81767	Pre-protein crosslinking domain of SecA
RPE_0146	SSF81886	Helical scaffold and wing domains of SecA
RPE_0147	SSF109998	Triger factor/SurA peptide-binding domain-like
RPE_0147	SSF54534	FKBP-like
RPE_0148	SSF56266	DmpA/ArgJ-like
RPE_0149	SSF55811	Nudix
RPE_0150	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_0152	SSF53271	PRTase-like
RPE_0153	SSF52833	Thioredoxin-like
RPE_0154	SSF56317	Carbon-nitrogen hydrolase
RPE_0156	SSF103481	Multidrug resistance efflux transporter EmrE
RPE_0157	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_0158	SSF53633	Carbamate kinase-like
RPE_0158	SSF55021	ACT-like
RPE_0159	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
RPE_0159	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPE_0159	SSF52009	Phosphohistidine domain
RPE_0159	SSF55781	GAF domain-like
RPE_0160	SSF75620	Release factor
RPE_0161	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_0163	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_0164	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_0165	SSF51182	RmlC-like cupins
RPE_0166	SSF103481	Multidrug resistance efflux transporter EmrE
RPE_0167	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0168	SSF53901	Thiolase-like
RPE_0171	SSF141868	EAL domain-like
RPE_0171	SSF55073	Nucleotide cyclase
RPE_0174	SSF57829	Zn-binding ribosomal proteins
RPE_0175	SSF53955	Lysozyme-like
RPE_0176	SSF48576	Terpenoid synthases
RPE_0179	SSF54975	Acylphosphatase/BLUF domain-like
RPE_0180	SSF141868	EAL domain-like
RPE_0180	SSF55073	Nucleotide cyclase
RPE_0186	SSF103481	Multidrug resistance efflux transporter EmrE
RPE_0187	SSF46785	"Winged helix" DNA-binding domain
RPE_0188	SSF46785	"Winged helix" DNA-binding domain
RPE_0189	SSF111369	HlyD-like secretion proteins
RPE_0190	SSF103473	MFS general substrate transporter
RPE_0191	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
RPE_0191	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
RPE_0192	SSF50249	Nucleic acid-binding proteins
RPE_0192	SSF54211	Ribosomal protein S5 domain 2-like
RPE_0192	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
RPE_0192	SSF55666	Ribonuclease PH domain 2-like
RPE_0193	SSF47060	S15/NS1 RNA-binding domain
RPE_0194	SSF55120	Pseudouridine synthase
RPE_0195	SSF89919	Ribosome-binding factor A, RbfA
RPE_0196	SSF50447	Translation proteins
RPE_0196	SSF52156	Initiation factor IF2/eIF5b, domain 3
RPE_0196	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0197	SSF55315	L30e-like
RPE_0197	SSF64376	YlxR-like
RPE_0198	SSF47794	Rad51 N-terminal domain-like
RPE_0198	SSF50249	Nucleic acid-binding proteins
RPE_0198	SSF54814	Prokaryotic type KH domain (KH-domain type II)
RPE_0198	SSF69705	Transcription factor NusA, N-terminal domain
RPE_0199	SSF74942	YhbC-like, C-terminal domain
RPE_0199	SSF75420	YhbC-like, N-terminal domain
RPE_0200	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_0201	SSF47413	lambda repressor-like DNA-binding domains
RPE_0202	SSF56317	Carbon-nitrogen hydrolase
RPE_0203	SSF54631	CBS-domain pair
RPE_0203	SSF56176	FAD-binding/transporter-associated domain-like
RPE_0204	SSF55486	Metalloproteases ("zincins"), catalytic domain
RPE_0205	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0205	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
RPE_0206	SSF102114	Radical SAM enzymes
RPE_0207	SSF56784	HAD-like
RPE_0208	SSF46785	"Winged helix" DNA-binding domain
RPE_0209	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_0210	SSF53067	Actin-like ATPase domain
RPE_0211	SSF110836	Hypothetical protein SAV1430
RPE_0211	SSF117916	Fe-S cluster assembly (FSCA) domain-like
RPE_0212	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0213	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_0216	SSF52374	Nucleotidylyl transferase
RPE_0218	SSF53613	Ribokinase-like
RPE_0220	SSF56601	beta-lactamase/transpeptidase-like
RPE_0222	SSF53720	ALDH-like
RPE_0224	SSF53955	Lysozyme-like
RPE_0224	SSF56601	beta-lactamase/transpeptidase-like
RPE_0226	SSF53474	alpha/beta-Hydrolases
RPE_0228	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0229	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_0229	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_0230	SSF52172	CheY-like
RPE_0232	SSF53300	vWA-like
RPE_0233	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_0235	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_0235	SSF52172	CheY-like
RPE_0235	SSF55785	PYP-like sensor domain (PAS domain)
RPE_0235	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_0236	SSF53474	alpha/beta-Hydrolases
RPE_0240	SSF103378	2-methylcitrate dehydratase PrpD
RPE_0241	SSF55785	PYP-like sensor domain (PAS domain)
RPE_0242	SSF47090	PGBD-like
RPE_0242	SSF50494	Trypsin-like serine proteases
RPE_0243	SSF69572	Activating enzymes of the ubiquitin-like proteins
RPE_0244	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0244	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RPE_0246	SSF48334	DNA repair protein MutS, domain III
RPE_0246	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0246	SSF53150	DNA repair protein MutS, domain II
RPE_0246	SSF55271	DNA repair protein MutS, domain I
RPE_0248	SSF53901	Thiolase-like
RPE_0251	SSF53474	alpha/beta-Hydrolases
RPE_0252	SSF46785	"Winged helix" DNA-binding domain
RPE_0252	SSF53850	Periplasmic binding protein-like II
RPE_0253	SSF48113	Heme-dependent peroxidases
RPE_0254	SSF47616	GST C-terminal domain-like
RPE_0254	SSF52833	Thioredoxin-like
RPE_0255	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0256	SSF53901	Thiolase-like
RPE_0257	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_0258	SSF46785	"Winged helix" DNA-binding domain
RPE_0259	SSF82784	OsmC-like
RPE_0260	SSF55021	ACT-like
RPE_0260	SSF81301	Nucleotidyltransferase
RPE_0260	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
RPE_0260	SSF81891	Poly A polymerase C-terminal region-like
RPE_0261	SSF103190	Sensory domain-like
RPE_0261	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_0261	SSF52172	CheY-like
RPE_0261	SSF55785	PYP-like sensor domain (PAS domain)
RPE_0261	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_0262	SSF54909	Dimeric alpha+beta barrel
RPE_0264	SSF53822	Periplasmic binding protein-like I
RPE_0266	SSF53720	ALDH-like
RPE_0267	SSF52374	Nucleotidylyl transferase
RPE_0268	SSF81301	Nucleotidyltransferase
RPE_0269	SSF75217	alpha/beta knot
RPE_0270	SSF51261	Duplicated hybrid motif
RPE_0271	SSF50156	PDZ domain-like
RPE_0271	SSF52096	ClpP/crotonase
RPE_0272	SSF88713	Glycoside hydrolase/deacetylase
RPE_0273	SSF55811	Nudix
RPE_0275	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0276	SSF55811	Nudix
RPE_0277	SSF51569	Aldolase
RPE_0278	SSF46689	Homeodomain-like
RPE_0278	SSF51182	RmlC-like cupins
RPE_0279	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
RPE_0280	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
RPE_0280	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
RPE_0280	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0281	SSF52943	ATP synthase (F1-ATPase), gamma subunit
RPE_0282	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
RPE_0282	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
RPE_0282	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0283	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
RPE_0285	SSF50685	Barwin-like endoglucanases
RPE_0286	SSF161219	CHY zinc finger-like
RPE_0286	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0287	SSF47823	lambda integrase-like, N-terminal domain
RPE_0287	SSF56349	DNA breaking-rejoining enzymes
RPE_0290	SSF51905	FAD/NAD(P)-binding domain
RPE_0290	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RPE_0292	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0293	SSF161084	MAPEG domain-like
RPE_0294	SSF143880	NE0471 N-terminal domain-like
RPE_0296	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
RPE_0296	SSF51230	Single hybrid motif
RPE_0296	SSF52777	CoA-dependent acyltransferases
RPE_0297	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_0298	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0298	SSF52210	Succinyl-CoA synthetase domains
RPE_0299	SSF52210	Succinyl-CoA synthetase domains
RPE_0299	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_0300	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0300	SSF56327	LDH C-terminal domain-like
RPE_0301	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0302	SSF55144	LigT-like
RPE_0303	SSF52266	SGNH hydrolase
RPE_0304	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0307	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_0309	SSF52833	Thioredoxin-like
RPE_0310	SSF52016	LeuD/IlvD-like
RPE_0310	SSF53732	Aconitase iron-sulfur domain
RPE_0311	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0315	SSF52833	Thioredoxin-like
RPE_0316	SSF81585	PsbU/PolX domain-like
RPE_0318	SSF47364	Domain of the SRP/SRP receptor G-proteins
RPE_0318	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0319	SSF55120	Pseudouridine synthase
RPE_0320	SSF102114	Radical SAM enzymes
RPE_0321	SSF54506	Diaminopimelate epimerase-like
RPE_0322	SSF55136	Probable bacterial effector-binding domain
RPE_0324	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_0325	SSF56918	Light-harvesting complex subunits
RPE_0326	SSF56918	Light-harvesting complex subunits
RPE_0327	SSF47446	Signal peptide-binding domain
RPE_0327	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0328	SSF54565	Ribosomal protein S16
RPE_0329	SSF50346	PRC-barrel domain
RPE_0329	SSF50447	Translation proteins
RPE_0330	SSF75217	alpha/beta knot
RPE_0331	SSF50104	Translation proteins SH3-like domain
RPE_0332	SSF53732	Aconitase iron-sulfur domain
RPE_0333	SSF50447	Translation proteins
RPE_0333	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
RPE_0333	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0334	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_0338	SSF55486	Metalloproteases ("zincins"), catalytic domain
RPE_0339	SSF52016	LeuD/IlvD-like
RPE_0340	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPE_0341	SSF53056	beta-carbonic anhydrase, cab
RPE_0342	SSF53254	Phosphoglycerate mutase-like
RPE_0343	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0343	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPE_0344	SSF54909	Dimeric alpha+beta barrel
RPE_0345	SSF51366	Ribulose-phoshate binding barrel
RPE_0346	SSF52218	Flavoproteins
RPE_0347	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_0348	SSF46565	Chaperone J-domain
RPE_0348	SSF49493	HSP40/DnaJ peptide-binding domain
RPE_0348	SSF57938	DnaJ/Hsp40 cysteine-rich domain
RPE_0349	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
RPE_0349	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
RPE_0349	SSF53067	Actin-like ATPase domain
RPE_0351	SSF51064	Head domain of nucleotide exchange factor GrpE
RPE_0351	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
RPE_0352	SSF46785	"Winged helix" DNA-binding domain
RPE_0352	SSF55781	GAF domain-like
RPE_0353	SSF54211	Ribosomal protein S5 domain 2-like
RPE_0353	SSF55666	Ribonuclease PH domain 2-like
RPE_0354	SSF52972	ITPase-like
RPE_0355	SSF102114	Radical SAM enzymes
RPE_0356	SSF53822	Periplasmic binding protein-like I
RPE_0357	SSF53790	Tetrapyrrole methylase
RPE_0358	SSF52980	Restriction endonuclease-like
RPE_0359	SSF52440	PreATP-grasp domain
RPE_0359	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_0360	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0360	SSF54211	Ribosomal protein S5 domain 2-like
RPE_0362	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_0362	SSF52172	CheY-like
RPE_0362	SSF55785	PYP-like sensor domain (PAS domain)
RPE_0362	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_0363	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_0364	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0365	SSF101386	all-alpha NTP pyrophosphatases
RPE_0366	SSF51366	Ribulose-phoshate binding barrel
RPE_0367	SSF51366	Ribulose-phoshate binding barrel
RPE_0368	SSF52317	Class I glutamine amidotransferase-like
RPE_0370	SSF54211	Ribosomal protein S5 domain 2-like
RPE_0371	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPE_0372	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0373	SSF160443	SMR domain-like
RPE_0374	SSF50685	Barwin-like endoglucanases
RPE_0375	SSF54427	NTF2-like
RPE_0376	SSF54611	SecB-like
RPE_0377	SSF53098	Ribonuclease H-like
RPE_0378	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0379	SSF52972	ITPase-like
RPE_0382	SSF50249	Nucleic acid-binding proteins
RPE_0382	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0382	SSF68912	Rho N-terminal domain-like
RPE_0383	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0384	SSF51905	FAD/NAD(P)-binding domain
RPE_0385	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_0386	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0387	SSF110849	ParB/Sulfiredoxin
RPE_0388	SSF48019	post-AAA+ oligomerization domain-like
RPE_0388	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0390	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPE_0390	SSF50677	ValRS/IleRS/LeuRS editing domain
RPE_0390	SSF52374	Nucleotidylyl transferase
RPE_0391	SSF158472	HAMP domain-like
RPE_0391	SSF55073	Nucleotide cyclase
RPE_0392	SSF51419	PLP-binding barrel
RPE_0393	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_0394	SSF52172	CheY-like
RPE_0395	SSF51206	cAMP-binding domain-like
RPE_0396	SSF56219	DNase I-like
RPE_0397	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
RPE_0398	SSF46785	"Winged helix" DNA-binding domain
RPE_0398	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0399	SSF53383	PLP-dependent transferases
RPE_0401	SSF81301	Nucleotidyltransferase
RPE_0402	SSF111352	Ammonium transporter
RPE_0403	SSF54913	GlnB-like
RPE_0404	SSF111352	Ammonium transporter
RPE_0405	SSF54913	GlnB-like
RPE_0406	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_0407	SSF51905	FAD/NAD(P)-binding domain
RPE_0408	SSF158997	Trm112p-like
RPE_0409	SSF88697	PUA domain-like
RPE_0410	SSF48452	TPR-like
RPE_0410	SSF52833	Thioredoxin-like
RPE_0411	SSF158472	HAMP domain-like
RPE_0413	SSF51197	Clavaminate synthase-like
RPE_0414	SSF53067	Actin-like ATPase domain
RPE_0415	SSF158832	Tex N-terminal region-like
RPE_0415	SSF47781	RuvA domain 2-like
RPE_0415	SSF50249	Nucleic acid-binding proteins
RPE_0415	SSF53098	Ribonuclease H-like
RPE_0416	SSF56784	HAD-like
RPE_0417	SSF53474	alpha/beta-Hydrolases
RPE_0419	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0422	SSF51649	RuBisCo, C-terminal domain
RPE_0422	SSF54966	RuBisCO, large subunit, small (N-terminal) domain
RPE_0423	SSF111038	YjbQ-like
RPE_0424	SSF54427	NTF2-like
RPE_0425	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0426	SSF53098	Ribonuclease H-like
RPE_0429	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0431	SSF69754	Ribosome binding protein Y (YfiA homologue)
RPE_0432	SSF55804	Phoshotransferase/anion transport protein
RPE_0435	SSF49764	HSP20-like chaperones
RPE_0436	SSF50331	MOP-like
RPE_0436	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0437	SSF161098	MetI-like
RPE_0438	SSF161098	MetI-like
RPE_0439	SSF52980	Restriction endonuclease-like
RPE_0440	SSF53850	Periplasmic binding protein-like II
RPE_0441	SSF89796	CoA-transferase family III (CaiB/BaiF)
RPE_0442	SSF82771	GIY-YIG endonuclease
RPE_0444	SSF55205	EPT/RTPC-like
RPE_0446	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0449	SSF50249	Nucleic acid-binding proteins
RPE_0450	SSF52096	ClpP/crotonase
RPE_0451	SSF47729	IHF-like DNA-binding proteins
RPE_0453	SSF51366	Ribulose-phoshate binding barrel
RPE_0454	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPE_0455	SSF51366	Ribulose-phoshate binding barrel
RPE_0456	SSF52096	ClpP/crotonase
RPE_0457	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPE_0457	SSF53623	MurD-like peptide ligases, catalytic domain
RPE_0458	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_0459	SSF52833	Thioredoxin-like
RPE_0460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0460	SSF52980	Restriction endonuclease-like
RPE_0461	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0462	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_0463	SSF141371	PilZ domain-like
RPE_0464	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0464	SSF56112	Protein kinase-like (PK-like)
RPE_0465	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_0465	SSF55785	PYP-like sensor domain (PAS domain)
RPE_0465	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_0466	SSF51283	dUTPase-like
RPE_0467	SSF102645	CoaB-like
RPE_0467	SSF47598	Ribbon-helix-helix
RPE_0467	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
RPE_0469	SSF56112	Protein kinase-like (PK-like)
RPE_0470	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_0471	SSF46946	S13-like H2TH domain
RPE_0471	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RPE_0471	SSF81624	N-terminal domain of MutM-like DNA repair proteins
RPE_0472	SSF89447	AbrB/MazE/MraZ-like
RPE_0473	SSF56801	Acetyl-CoA synthetase-like
RPE_0474	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0475	SSF47413	lambda repressor-like DNA-binding domains
RPE_0475	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0476	SSF82153	FAS1 domain
RPE_0477	SSF81342	Transmembrane di-heme cytochromes
RPE_0478	SSF56524	Oxidoreductase molybdopterin-binding domain
RPE_0479	SSF103473	MFS general substrate transporter
RPE_0480	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPE_0481	SSF143422	Transposase IS200-like
RPE_0484	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0484	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPE_0486	SSF46689	Homeodomain-like
RPE_0486	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
RPE_0486	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
RPE_0488	SSF48150	DNA-glycosylase
RPE_0490	SSF54001	Cysteine proteinases
RPE_0491	SSF51905	FAD/NAD(P)-binding domain
RPE_0491	SSF54373	FAD-linked reductases, C-terminal domain
RPE_0493	SSF46955	Putative DNA-binding domain
RPE_0493	SSF50249	Nucleic acid-binding proteins
RPE_0493	SSF54991	Anticodon-binding domain of PheRS
RPE_0493	SSF55681	Class II aaRS and biotin synthetases
RPE_0493	SSF56037	PheT/TilS domain
RPE_0496	SSF46589	tRNA-binding arm
RPE_0496	SSF55681	Class II aaRS and biotin synthetases
RPE_0497	SSF74731	Ribosomal protein L20
RPE_0498	SSF143034	L35p-like
RPE_0500	SSF54364	Translation initiation factor IF3, N-terminal domain
RPE_0500	SSF55200	Translation initiation factor IF3, C-terminal domain
RPE_0501	SSF53474	alpha/beta-Hydrolases
RPE_0502	SSF48371	ARM repeat
RPE_0502	SSF54862	4Fe-4S ferredoxins
RPE_0503	SSF47616	GST C-terminal domain-like
RPE_0503	SSF52833	Thioredoxin-like
RPE_0505	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0506	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_0507	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_0508	SSF158472	HAMP domain-like
RPE_0508	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_0509	SSF160240	Cation efflux protein cytoplasmic domain-like
RPE_0509	SSF161111	Cation efflux protein transmembrane domain-like
RPE_0510	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
RPE_0511	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
RPE_0512	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
RPE_0512	SSF51905	FAD/NAD(P)-binding domain
RPE_0512	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
RPE_0514	SSF46548	alpha-helical ferredoxin
RPE_0514	SSF54292	2Fe-2S ferredoxin-like
RPE_0515	SSF50475	FMN-binding split barrel
RPE_0517	SSF103088	OmpA-like
RPE_0518	SSF161084	MAPEG domain-like
RPE_0519	SSF159245	AttH-like
RPE_0521	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0522	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_0526	SSF56935	Porins
RPE_0527	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RPE_0528	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0529	SSF53807	"Helical backbone" metal receptor
RPE_0530	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_0531	SSF103473	MFS general substrate transporter
RPE_0532	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_0532	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_0534	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_0534	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_0535	SSF53850	Periplasmic binding protein-like II
RPE_0536	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_0540	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_0540	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_0541	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_0541	SSF52172	CheY-like
RPE_0542	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_0542	SSF52172	CheY-like
RPE_0542	SSF55781	GAF domain-like
RPE_0542	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_0543	SSF158472	HAMP domain-like
RPE_0543	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_0544	SSF53850	Periplasmic binding protein-like II
RPE_0546	SSF53822	Periplasmic binding protein-like I
RPE_0547	SSF51182	RmlC-like cupins
RPE_0548	SSF56104	SAICAR synthase-like
RPE_0549	SSF53633	Carbamate kinase-like
RPE_0549	SSF88697	PUA domain-like
RPE_0550	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0550	SSF82051	Obg GTP-binding protein N-terminal domain
RPE_0551	SSF103481	Multidrug resistance efflux transporter EmrE
RPE_0554	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_0555	SSF110324	Ribosomal L27 protein-like
RPE_0556	SSF141091	L21p-like
RPE_0557	SSF53067	Actin-like ATPase domain
RPE_0558	SSF56349	DNA breaking-rejoining enzymes
RPE_0559	SSF46785	"Winged helix" DNA-binding domain
RPE_0560	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0561	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_0562	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0572	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
RPE_0573	SSF51366	Ribulose-phoshate binding barrel
RPE_0574	SSF56601	beta-lactamase/transpeptidase-like
RPE_0579	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_0580	SSF56801	Acetyl-CoA synthetase-like
RPE_0581	SSF47336	ACP-like
RPE_0582	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_0582	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPE_0584	SSF47240	Ferritin-like
RPE_0585	SSF52096	ClpP/crotonase
RPE_0586	SSF53474	alpha/beta-Hydrolases
RPE_0587	SSF50129	GroES-like
RPE_0587	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0588	SSF46785	"Winged helix" DNA-binding domain
RPE_0588	SSF51206	cAMP-binding domain-like
RPE_0589	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
RPE_0589	SSF56176	FAD-binding/transporter-associated domain-like
RPE_0590	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
RPE_0590	SSF56003	Molybdenum cofactor-binding domain
RPE_0591	SSF47741	CO dehydrogenase ISP C-domain like
RPE_0591	SSF54292	2Fe-2S ferredoxin-like
RPE_0592	SSF56801	Acetyl-CoA synthetase-like
RPE_0593	SSF53822	Periplasmic binding protein-like I
RPE_0595	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0596	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0597	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_0598	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_0599	SSF46785	"Winged helix" DNA-binding domain
RPE_0600	SSF47240	Ferritin-like
RPE_0601	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_0602	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_0602	SSF52922	TK C-terminal domain-like
RPE_0602	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
RPE_0603	SSF54862	4Fe-4S ferredoxins
RPE_0604	SSF56801	Acetyl-CoA synthetase-like
RPE_0605	SSF53067	Actin-like ATPase domain
RPE_0606	SSF53067	Actin-like ATPase domain
RPE_0609	SSF50129	GroES-like
RPE_0609	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0610	SSF46785	"Winged helix" DNA-binding domain
RPE_0611	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0612	SSF52096	ClpP/crotonase
RPE_0613	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_0613	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_0614	SSF56801	Acetyl-CoA synthetase-like
RPE_0615	SSF52096	ClpP/crotonase
RPE_0616	SSF53187	Zn-dependent exopeptidases
RPE_0617	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_0618	SSF53300	vWA-like
RPE_0620	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0621	SSF81442	Cytochrome c oxidase subunit I-like
RPE_0622	SSF46626	Cytochrome c
RPE_0624	SSF81452	Cytochrome c oxidase subunit III-like
RPE_0626	SSF56918	Light-harvesting complex subunits
RPE_0627	SSF56918	Light-harvesting complex subunits
RPE_0628	SSF56918	Light-harvesting complex subunits
RPE_0629	SSF56918	Light-harvesting complex subunits
RPE_0630	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_0630	SSF52172	CheY-like
RPE_0631	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_0631	SSF55781	GAF domain-like
RPE_0631	SSF55785	PYP-like sensor domain (PAS domain)
RPE_0631	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_0632	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_0632	SSF55781	GAF domain-like
RPE_0632	SSF55785	PYP-like sensor domain (PAS domain)
RPE_0632	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_0633	SSF52172	CheY-like
RPE_0634	SSF52172	CheY-like
RPE_0634	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_0635	SSF51230	Single hybrid motif
RPE_0635	SSF51246	Rudiment single hybrid motif
RPE_0635	SSF51569	Aldolase
RPE_0635	SSF52440	PreATP-grasp domain
RPE_0635	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_0635	SSF89000	post-HMGL domain-like
RPE_0636	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
RPE_0637	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_0638	SSF102114	Radical SAM enzymes
RPE_0641	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_0643	SSF54211	Ribosomal protein S5 domain 2-like
RPE_0645	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0647	SSF53633	Carbamate kinase-like
RPE_0648	SSF47090	PGBD-like
RPE_0649	SSF56784	HAD-like
RPE_0650	SSF82771	GIY-YIG endonuclease
RPE_0651	SSF51161	Trimeric LpxA-like enzymes
RPE_0653	SSF53187	Zn-dependent exopeptidases
RPE_0653	SSF55031	Bacterial exopeptidase dimerisation domain
RPE_0654	SSF55120	Pseudouridine synthase
RPE_0655	SSF50486	FMT C-terminal domain-like
RPE_0655	SSF53328	Formyltransferase
RPE_0656	SSF56420	Peptide deformylase
RPE_0658	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_0661	SSF103088	OmpA-like
RPE_0662	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_0664	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0664	SSF90123	ABC transporter transmembrane region
RPE_0665	SSF143800	L28p-like
RPE_0668	SSF50129	GroES-like
RPE_0668	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0669	SSF141868	EAL domain-like
RPE_0669	SSF55073	Nucleotide cyclase
RPE_0669	SSF55785	PYP-like sensor domain (PAS domain)
RPE_0670	SSF46785	"Winged helix" DNA-binding domain
RPE_0671	SSF54427	NTF2-like
RPE_0672	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_0672	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_0673	SSF53901	Thiolase-like
RPE_0674	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_0674	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0674	SSF52096	ClpP/crotonase
RPE_0675	SSF47616	GST C-terminal domain-like
RPE_0675	SSF52833	Thioredoxin-like
RPE_0676	SSF46785	"Winged helix" DNA-binding domain
RPE_0677	SSF55931	Glutamine synthetase/guanido kinase
RPE_0679	SSF46689	Homeodomain-like
RPE_0679	SSF53098	Ribonuclease H-like
RPE_0682	SSF46548	alpha-helical ferredoxin
RPE_0682	SSF51971	Nucleotide-binding domain
RPE_0683	SSF51395	FMN-linked oxidoreductases
RPE_0683	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPE_0683	SSF69336	Alpha subunit of glutamate synthase, C-terminal domain
RPE_0685	SSF49764	HSP20-like chaperones
RPE_0686	SSF53474	alpha/beta-Hydrolases
RPE_0687	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_0688	SSF55073	Nucleotide cyclase
RPE_0696	SSF53697	SIS domain
RPE_0697	SSF103473	MFS general substrate transporter
RPE_0698	SSF52266	SGNH hydrolase
RPE_0699	SSF140931	Fic-like
RPE_0701	SSF47090	PGBD-like
RPE_0701	SSF53955	Lysozyme-like
RPE_0704	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPE_0705	SSF46689	Homeodomain-like
RPE_0706	SSF56655	Carbohydrate phosphatase
RPE_0707	SSF53187	Zn-dependent exopeptidases
RPE_0708	SSF52172	CheY-like
RPE_0710	SSF52218	Flavoproteins
RPE_0711	SSF51182	RmlC-like cupins
RPE_0712	SSF46785	"Winged helix" DNA-binding domain
RPE_0712	SSF53850	Periplasmic binding protein-like II
RPE_0714	SSF143456	VC0467-like
RPE_0715	SSF81901	HCP-like
RPE_0718	SSF51069	Carbonic anhydrase
RPE_0719	SSF51306	LexA/Signal peptidase
RPE_0720	SSF56399	ADP-ribosylation
RPE_0721	SSF51395	FMN-linked oxidoreductases
RPE_0722	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_0725	SSF50249	Nucleic acid-binding proteins
RPE_0725	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
RPE_0726	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_0727	SSF48452	TPR-like
RPE_0727	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_0728	SSF56925	OMPA-like
RPE_0729	SSF53822	Periplasmic binding protein-like I
RPE_0730	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0731	SSF56300	Metallo-dependent phosphatases
RPE_0732	SSF46785	"Winged helix" DNA-binding domain
RPE_0732	SSF53850	Periplasmic binding protein-like II
RPE_0733	SSF103481	Multidrug resistance efflux transporter EmrE
RPE_0734	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_0736	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
RPE_0736	SSF52374	Nucleotidylyl transferase
RPE_0737	SSF53850	Periplasmic binding protein-like II
RPE_0738	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_0739	SSF52833	Thioredoxin-like
RPE_0740	SSF52096	ClpP/crotonase
RPE_0742	SSF53901	Thiolase-like
RPE_0744	SSF46785	"Winged helix" DNA-binding domain
RPE_0744	SSF53850	Periplasmic binding protein-like II
RPE_0745	SSF54506	Diaminopimelate epimerase-like
RPE_0746	SSF51556	Metallo-dependent hydrolases
RPE_0747	SSF89562	RraA-like
RPE_0748	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_0748	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0749	SSF51556	Metallo-dependent hydrolases
RPE_0750	SSF48076	LigA subunit of an aromatic-ring-opening dioxygenase LigAB
RPE_0751	SSF53213	LigB-like
RPE_0752	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0752	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPE_0754	SSF101386	all-alpha NTP pyrophosphatases
RPE_0757	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
RPE_0758	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_0761	SSF52743	Subtilisin-like
RPE_0762	SSF50331	MOP-like
RPE_0762	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0763	SSF161098	MetI-like
RPE_0764	SSF53850	Periplasmic binding protein-like II
RPE_0765	SSF46785	"Winged helix" DNA-binding domain
RPE_0765	SSF50331	MOP-like
RPE_0766	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_0766	SSF52922	TK C-terminal domain-like
RPE_0766	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
RPE_0766	SSF54862	4Fe-4S ferredoxins
RPE_0767	SSF46548	alpha-helical ferredoxin
RPE_0767	SSF51971	Nucleotide-binding domain
RPE_0767	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
RPE_0767	SSF63380	Riboflavin synthase domain-like
RPE_0769	SSF53613	Ribokinase-like
RPE_0770	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPE_0771	SSF51905	FAD/NAD(P)-binding domain
RPE_0771	SSF53474	alpha/beta-Hydrolases
RPE_0773	SSF64518	Phase 1 flagellin
RPE_0774	SSF64518	Phase 1 flagellin
RPE_0777	SSF117143	Flagellar hook protein flgE
RPE_0780	SSF101116	Flagellar export chaperone FliS
RPE_0782	SSF64518	Phase 1 flagellin
RPE_0783	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_0783	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_0786	SSF158442	DsbB-like
RPE_0790	SSF52833	Thioredoxin-like
RPE_0794	SSF51182	RmlC-like cupins
RPE_0795	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_0795	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_0796	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RPE_0800	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_0801	SSF51161	Trimeric LpxA-like enzymes
RPE_0801	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_0803	SSF54631	CBS-domain pair
RPE_0804	SSF100950	NagB/RpiA/CoA transferase-like
RPE_0805	SSF53474	alpha/beta-Hydrolases
RPE_0806	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_0807	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0808	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_0809	SSF88713	Glycoside hydrolase/deacetylase
RPE_0810	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_0811	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_0813	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_0814	SSF51445	(Trans)glycosidases
RPE_0817	SSF55120	Pseudouridine synthase
RPE_0817	SSF55174	Alpha-L RNA-binding motif
RPE_0818	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_0818	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_0819	SSF53795	PEP carboxykinase-like
RPE_0819	SSF68923	PEP carboxykinase N-terminal domain
RPE_0820	SSF50475	FMN-binding split barrel
RPE_0821	SSF52172	CheY-like
RPE_0822	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_0822	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_0823	SSF53795	PEP carboxykinase-like
RPE_0824	SSF53062	PTS system fructose IIA component-like
RPE_0825	SSF55594	HPr-like
RPE_0827	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0827	SSF54980	EF-G C-terminal domain-like
RPE_0830	SSF53474	alpha/beta-Hydrolases
RPE_0831	SSF48695	Multiheme cytochromes
RPE_0832	SSF56935	Porins
RPE_0833	SSF57652	HIPIP (high potential iron protein)
RPE_0834	SSF56925	OMPA-like
RPE_0835	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0836	SSF101478	ADP-ribosylglycohydrolase
RPE_0838	SSF52317	Class I glutamine amidotransferase-like
RPE_0843	SSF102114	Radical SAM enzymes
RPE_0845	SSF48613	Heme oxygenase-like
RPE_0846	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_0847	SSF56801	Acetyl-CoA synthetase-like
RPE_0848	SSF53822	Periplasmic binding protein-like I
RPE_0849	SSF81296	E set domains
RPE_0850	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_0851	SSF50998	Quinoprotein alcohol dehydrogenase-like
RPE_0852	SSF46626	Cytochrome c
RPE_0853	SSF53850	Periplasmic binding protein-like II
RPE_0854	SSF52821	Rhodanese/Cell cycle control phosphatase
RPE_0858	SSF51905	FAD/NAD(P)-binding domain
RPE_0861	SSF48592	GroEL equatorial domain-like
RPE_0861	SSF52029	GroEL apical domain-like
RPE_0861	SSF54849	GroEL-intermediate domain like
RPE_0862	SSF50129	GroES-like
RPE_0864	SSF103473	MFS general substrate transporter
RPE_0865	SSF75708	Chemotaxis phosphatase CheZ
RPE_0866	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_0869	SSF88713	Glycoside hydrolase/deacetylase
RPE_0870	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_0871	SSF53850	Periplasmic binding protein-like II
RPE_0872	SSF55681	Class II aaRS and biotin synthetases
RPE_0873	SSF75217	alpha/beta knot
RPE_0873	SSF88697	PUA domain-like
RPE_0877	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
RPE_0878	SSF56655	Carbohydrate phosphatase
RPE_0880	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_0881	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0883	SSF141868	EAL domain-like
RPE_0883	SSF55073	Nucleotide cyclase
RPE_0884	SSF53850	Periplasmic binding protein-like II
RPE_0886	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPE_0887	SSF90123	ABC transporter transmembrane region
RPE_0889	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_0889	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_0890	SSF46626	Cytochrome c
RPE_0892	SSF141868	EAL domain-like
RPE_0892	SSF55073	Nucleotide cyclase
RPE_0892	SSF55785	PYP-like sensor domain (PAS domain)
RPE_0893	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_0894	SSF55073	Nucleotide cyclase
RPE_0895	SSF48264	Cytochrome P450
RPE_0897	SSF53383	PLP-dependent transferases
RPE_0898	SSF50199	Staphylococcal nuclease
RPE_0900	SSF52129	Caspase-like
RPE_0901	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_0902	SSF74650	Galactose mutarotase-like
RPE_0902	SSF81296	E set domains
RPE_0903	SSF51230	Single hybrid motif
RPE_0905	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPE_0905	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPE_0905	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_0906	SSF51230	Single hybrid motif
RPE_0907	SSF103088	OmpA-like
RPE_0908	SSF48452	TPR-like
RPE_0908	SSF52129	Caspase-like
RPE_0909	SSF51905	FAD/NAD(P)-binding domain
RPE_0911	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_0912	SSF51182	RmlC-like cupins
RPE_0913	SSF56529	FAH
RPE_0913	SSF63433	Fumarylacetoacetate hydrolase, FAH, N-terminal domain
RPE_0914	SSF52954	Class II aaRS ABD-related
RPE_0914	SSF55681	Class II aaRS and biotin synthetases
RPE_0915	SSF53383	PLP-dependent transferases
RPE_0916	SSF141868	EAL domain-like
RPE_0917	SSF56784	HAD-like
RPE_0920	SSF52172	CheY-like
RPE_0921	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_0922	SSF50249	Nucleic acid-binding proteins
RPE_0923	SSF56925	OMPA-like
RPE_0924	SSF46600	C-terminal UvrC-binding domain of UvrB
RPE_0924	SSF47781	RuvA domain 2-like
RPE_0924	SSF82771	GIY-YIG endonuclease
RPE_0926	SSF54285	MoaD/ThiS
RPE_0927	SSF54690	Molybdopterin synthase subunit MoaE
RPE_0928	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_0929	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_0930	SSF55120	Pseudouridine synthase
RPE_0930	SSF55174	Alpha-L RNA-binding motif
RPE_0931	SSF53927	Cytidine deaminase-like
RPE_0933	SSF46785	"Winged helix" DNA-binding domain
RPE_0934	SSF89796	CoA-transferase family III (CaiB/BaiF)
RPE_0935	SSF55331	Tautomerase/MIF
RPE_0936	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_0937	SSF52317	Class I glutamine amidotransferase-like
RPE_0938	SSF52317	Class I glutamine amidotransferase-like
RPE_0940	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0942	SSF55811	Nudix
RPE_0944	SSF81301	Nucleotidyltransferase
RPE_0944	SSF81891	Poly A polymerase C-terminal region-like
RPE_0946	SSF102114	Radical SAM enzymes
RPE_0947	SSF75217	alpha/beta knot
RPE_0948	SSF50022	ISP domain
RPE_0949	SSF46626	Cytochrome c
RPE_0949	SSF81342	Transmembrane di-heme cytochromes
RPE_0949	SSF81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
RPE_0950	SSF53474	alpha/beta-Hydrolases
RPE_0956	SSF143243	Nqo5-like
RPE_0956	SSF56762	HydB/Nqo4-like
RPE_0957	SSF56770	HydA/Nqo6-like
RPE_0958	SSF103515	Autotransporter
RPE_0958	SSF52266	SGNH hydrolase
RPE_0962	SSF74653	TolA/TonB C-terminal domain
RPE_0964	SSF48295	TrpR-like
RPE_0966	SSF48029	FliG
RPE_0968	SSF101801	Surface presentation of antigens (SPOA)
RPE_0969	SSF46689	Homeodomain-like
RPE_0969	SSF52172	CheY-like
RPE_0969	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0971	SSF160272	Shew3726-like
RPE_0974	SSF54001	Cysteine proteinases
RPE_0975	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_0976	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_0977	SSF47240	Ferritin-like
RPE_0978	SSF51182	RmlC-like cupins
RPE_0979	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
RPE_0979	SSF52317	Class I glutamine amidotransferase-like
RPE_0980	SSF89095	GatB/YqeY motif
RPE_0981	SSF56801	Acetyl-CoA synthetase-like
RPE_0982	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
RPE_0983	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_0984	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_0984	SSF52922	TK C-terminal domain-like
RPE_0985	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
RPE_0985	SSF54862	4Fe-4S ferredoxins
RPE_0986	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_0986	SSF52922	TK C-terminal domain-like
RPE_0986	SSF54862	4Fe-4S ferredoxins
RPE_0987	SSF46785	"Winged helix" DNA-binding domain
RPE_0988	SSF47240	Ferritin-like
RPE_0990	SSF47240	Ferritin-like
RPE_0991	SSF117916	Fe-S cluster assembly (FSCA) domain-like
RPE_0992	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
RPE_0992	SSF54292	2Fe-2S ferredoxin-like
RPE_0992	SSF63380	Riboflavin synthase domain-like
RPE_0993	SSF54909	Dimeric alpha+beta barrel
RPE_0994	SSF53720	ALDH-like
RPE_0994	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_0995	SSF46689	Homeodomain-like
RPE_0995	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_0996	SSF56801	Acetyl-CoA synthetase-like
RPE_0997	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_0998	SSF52096	ClpP/crotonase
RPE_0999	SSF53822	Periplasmic binding protein-like I
RPE_1002	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1003	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1004	SSF56784	HAD-like
RPE_1005	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_1005	SSF52172	CheY-like
RPE_1006	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_1007	SSF48113	Heme-dependent peroxidases
RPE_1007	SSF51120	beta-Roll
RPE_1008	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1008	SSF90123	ABC transporter transmembrane region
RPE_1009	SSF51120	beta-Roll
RPE_1010	SSF111369	HlyD-like secretion proteins
RPE_1014	SSF48295	TrpR-like
RPE_1017	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1019	SSF48371	ARM repeat
RPE_1019	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1026	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1031	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1036	SSF53041	Resolvase-like
RPE_1038	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_1039	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_1042	SSF53955	Lysozyme-like
RPE_1046	SSF51182	RmlC-like cupins
RPE_1047	SSF46626	Cytochrome c
RPE_1048	SSF50952	Soluble quinoprotein glucose dehydrogenase
RPE_1052	SSF46689	Homeodomain-like
RPE_1052	SSF53098	Ribonuclease H-like
RPE_1055	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_1055	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_1056	SSF56731	DNA primase core
RPE_1056	SSF57783	Zinc beta-ribbon
RPE_1058	SSF110857	Gamma-glutamyl cyclotransferase-like
RPE_1059	SSF53187	Zn-dependent exopeptidases
RPE_1060	SSF54736	ClpS-like
RPE_1061	SSF53300	vWA-like
RPE_1062	SSF50249	Nucleic acid-binding proteins
RPE_1062	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_1064	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_1064	SSF55174	Alpha-L RNA-binding motif
RPE_1065	SSF52309	N-(deoxy)ribosyltransferase-like
RPE_1067	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_1067	SSF52922	TK C-terminal domain-like
RPE_1068	SSF116842	XseB-like
RPE_1069	SSF52768	Arginase/deacetylase
RPE_1070	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
RPE_1070	SSF56300	Metallo-dependent phosphatases
RPE_1071	SSF47175	Cytochromes
RPE_1072	SSF160935	VPA0735-like
RPE_1072	SSF53474	alpha/beta-Hydrolases
RPE_1073	SSF52096	ClpP/crotonase
RPE_1074	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_1074	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_1075	SSF56349	DNA breaking-rejoining enzymes
RPE_1077	SSF48295	TrpR-like
RPE_1078	SSF53041	Resolvase-like
RPE_1081	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1083	SSF56300	Metallo-dependent phosphatases
RPE_1084	SSF54001	Cysteine proteinases
RPE_1085	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1085	SSF90123	ABC transporter transmembrane region
RPE_1088	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1090	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1094	SSF48452	TPR-like
RPE_1096	SSF52091	SpoIIaa-like
RPE_1097	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_1098	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1099	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_1101	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_1102	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_1103	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_1109	SSF110296	Oligoxyloglucan reducing end-specific cellobiohydrolase
RPE_1113	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_1115	SSF52266	SGNH hydrolase
RPE_1117	SSF53098	Ribonuclease H-like
RPE_1118	SSF46689	Homeodomain-like
RPE_1120	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_1120	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1120	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
RPE_1121	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_1122	SSF141371	PilZ domain-like
RPE_1125	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1127	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1128	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_1128	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_1131	SSF48295	TrpR-like
RPE_1132	SSF48295	TrpR-like
RPE_1142	SSF48295	TrpR-like
RPE_1144	SSF47598	Ribbon-helix-helix
RPE_1145	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_1146	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1147	SSF117143	Flagellar hook protein flgE
RPE_1148	SSF158837	AGR C 984p-like
RPE_1150	SSF101801	Surface presentation of antigens (SPOA)
RPE_1152	SSF101801	Surface presentation of antigens (SPOA)
RPE_1153	SSF48029	FliG
RPE_1154	SSF160544	EscU C-terminal domain-like
RPE_1158	SSF117143	Flagellar hook protein flgE
RPE_1161	SSF158791	MgtE N-terminal domain-like
RPE_1165	SSF64518	Phase 1 flagellin
RPE_1168	SSF103088	OmpA-like
RPE_1171	SSF53955	Lysozyme-like
RPE_1172	SSF117143	Flagellar hook protein flgE
RPE_1173	SSF64518	Phase 1 flagellin
RPE_1174	SSF64518	Phase 1 flagellin
RPE_1185	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_1185	SSF52172	CheY-like
RPE_1188	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_1189	SSF48208	Six-hairpin glycosidases
RPE_1190	SSF103473	MFS general substrate transporter
RPE_1191	SSF52091	SpoIIaa-like
RPE_1192	SSF52172	CheY-like
RPE_1193	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RPE_1193	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_1193	SSF50341	CheW-like
RPE_1193	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_1194	SSF50341	CheW-like
RPE_1195	SSF55785	PYP-like sensor domain (PAS domain)
RPE_1195	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_1196	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
RPE_1196	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_1197	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
RPE_1198	SSF52172	CheY-like
RPE_1198	SSF52738	Methylesterase CheB, C-terminal domain
RPE_1199	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_1200	SSF52091	SpoIIaa-like
RPE_1201	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_1202	SSF52172	CheY-like
RPE_1203	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RPE_1204	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_1204	SSF52172	CheY-like
RPE_1204	SSF55785	PYP-like sensor domain (PAS domain)
RPE_1204	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_1206	SSF52821	Rhodanese/Cell cycle control phosphatase
RPE_1207	SSF50022	ISP domain
RPE_1208	SSF53146	Nitrogenase accessory factor-like
RPE_1210	SSF53300	vWA-like
RPE_1211	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1213	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_1213	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_1214	SSF53850	Periplasmic binding protein-like II
RPE_1215	SSF161098	MetI-like
RPE_1216	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1219	SSF160467	PH0987 N-terminal domain-like
RPE_1219	SSF50891	Cyclophilin-like
RPE_1219	SSF51230	Single hybrid motif
RPE_1219	SSF51246	Rudiment single hybrid motif
RPE_1219	SSF52440	PreATP-grasp domain
RPE_1219	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_1220	SSF75304	Amidase signature (AS) enzymes
RPE_1223	SSF46689	Homeodomain-like
RPE_1223	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_1225	SSF111369	HlyD-like secretion proteins
RPE_1226	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPE_1226	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPE_1226	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_1227	SSF54909	Dimeric alpha+beta barrel
RPE_1228	SSF56796	Dehydroquinate synthase-like
RPE_1229	SSF56770	HydA/Nqo6-like
RPE_1230	SSF56762	HydB/Nqo4-like
RPE_1231	SSF56770	HydA/Nqo6-like
RPE_1232	SSF56762	HydB/Nqo4-like
RPE_1233	SSF81342	Transmembrane di-heme cytochromes
RPE_1234	SSF53163	HybD-like
RPE_1235	SSF159127	HupF/HypC-like
RPE_1236	SSF52833	Thioredoxin-like
RPE_1238	SSF57802	Rubredoxin-like
RPE_1240	SSF56762	HydB/Nqo4-like
RPE_1242	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1243	SSF54975	Acylphosphatase/BLUF domain-like
RPE_1243	SSF55821	YrdC/RibB
RPE_1244	SSF159127	HupF/HypC-like
RPE_1246	SSF55326	PurM N-terminal domain-like
RPE_1246	SSF56042	PurM C-terminal domain-like
RPE_1247	SSF46689	Homeodomain-like
RPE_1247	SSF52172	CheY-like
RPE_1247	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1248	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_1248	SSF55785	PYP-like sensor domain (PAS domain)
RPE_1248	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_1250	SSF56300	Metallo-dependent phosphatases
RPE_1251	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1253	SSF52467	DHS-like NAD/FAD-binding domain
RPE_1253	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_1254	SSF46785	"Winged helix" DNA-binding domain
RPE_1254	SSF54909	Dimeric alpha+beta barrel
RPE_1255	SSF52821	Rhodanese/Cell cycle control phosphatase
RPE_1258	SSF50692	ADC-like
RPE_1258	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
RPE_1259	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
RPE_1259	SSF63380	Riboflavin synthase domain-like
RPE_1260	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
RPE_1260	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
RPE_1261	SSF51905	FAD/NAD(P)-binding domain
RPE_1262	SSF46458	Globin-like
RPE_1263	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1264	SSF161098	MetI-like
RPE_1265	SSF53850	Periplasmic binding protein-like II
RPE_1266	SSF53850	Periplasmic binding protein-like II
RPE_1267	SSF52172	CheY-like
RPE_1272	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPE_1273	SSF51445	(Trans)glycosidases
RPE_1273	SSF81296	E set domains
RPE_1274	SSF51011	Glycosyl hydrolase domain
RPE_1274	SSF51445	(Trans)glycosidases
RPE_1274	SSF81296	E set domains
RPE_1275	SSF52172	CheY-like
RPE_1276	SSF53474	alpha/beta-Hydrolases
RPE_1278	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_1281	SSF53738	Phosphoglucomutase, first 3 domains
RPE_1281	SSF55957	Phosphoglucomutase, C-terminal domain
RPE_1282	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_1282	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
RPE_1290	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_1290	SSF52172	CheY-like
RPE_1292	SSF56918	Light-harvesting complex subunits
RPE_1293	SSF56918	Light-harvesting complex subunits
RPE_1294	SSF103473	MFS general substrate transporter
RPE_1297	SSF51905	FAD/NAD(P)-binding domain
RPE_1302	SSF49785	Galactose-binding domain-like
RPE_1303	SSF53474	alpha/beta-Hydrolases
RPE_1305	SSF53850	Periplasmic binding protein-like II
RPE_1305	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
RPE_1306	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1307	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1307	SSF53300	vWA-like
RPE_1308	SSF46689	Homeodomain-like
RPE_1308	SSF55785	PYP-like sensor domain (PAS domain)
RPE_1309	SSF46689	Homeodomain-like
RPE_1309	SSF55785	PYP-like sensor domain (PAS domain)
RPE_1310	SSF158472	HAMP domain-like
RPE_1310	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_1311	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_1312	SSF51726	UROD/MetE-like
RPE_1313	SSF53474	alpha/beta-Hydrolases
RPE_1314	SSF53474	alpha/beta-Hydrolases
RPE_1315	SSF51905	FAD/NAD(P)-binding domain
RPE_1316	SSF48576	Terpenoid synthases
RPE_1317	SSF102886	Coproporphyrinogen III oxidase
RPE_1320	SSF159245	AttH-like
RPE_1322	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1323	SSF51905	FAD/NAD(P)-binding domain
RPE_1324	SSF48576	Terpenoid synthases
RPE_1325	SSF46785	"Winged helix" DNA-binding domain
RPE_1325	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_1326	SSF50129	GroES-like
RPE_1326	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1327	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1328	SSF53807	"Helical backbone" metal receptor
RPE_1329	SSF53807	"Helical backbone" metal receptor
RPE_1331	SSF56918	Light-harvesting complex subunits
RPE_1332	SSF56918	Light-harvesting complex subunits
RPE_1333	SSF81483	Bacterial photosystem II reaction centre, L and M subunits
RPE_1334	SSF81483	Bacterial photosystem II reaction centre, L and M subunits
RPE_1335	SSF46689	Homeodomain-like
RPE_1335	SSF55785	PYP-like sensor domain (PAS domain)
RPE_1337	SSF103473	MFS general substrate transporter
RPE_1338	SSF51905	FAD/NAD(P)-binding domain
RPE_1341	SSF46626	Cytochrome c
RPE_1342	SSF46689	Homeodomain-like
RPE_1342	SSF55785	PYP-like sensor domain (PAS domain)
RPE_1343	SSF55781	GAF domain-like
RPE_1343	SSF55785	PYP-like sensor domain (PAS domain)
RPE_1344	SSF48613	Heme oxygenase-like
RPE_1345	SSF52242	Cobalamin (vitamin B12)-binding domain
RPE_1347	SSF53807	"Helical backbone" metal receptor
RPE_1348	SSF53807	"Helical backbone" metal receptor
RPE_1350	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1351	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_1352	SSF103473	MFS general substrate transporter
RPE_1353	SSF50346	PRC-barrel domain
RPE_1353	SSF81490	Photosystem II reaction centre subunit H, transmembrane region
RPE_1357	SSF47240	Ferritin-like
RPE_1359	SSF53383	PLP-dependent transferases
RPE_1360	SSF46785	"Winged helix" DNA-binding domain
RPE_1360	SSF53850	Periplasmic binding protein-like II
RPE_1361	SSF51649	RuBisCo, C-terminal domain
RPE_1361	SSF54966	RuBisCO, large subunit, small (N-terminal) domain
RPE_1362	SSF55239	RuBisCO, small subunit
RPE_1363	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1364	SSF53474	alpha/beta-Hydrolases
RPE_1365	SSF53383	PLP-dependent transferases
RPE_1366	SSF50993	Peptidase/esterase 'gauge' domain
RPE_1366	SSF53474	alpha/beta-Hydrolases
RPE_1367	SSF144266	MPN010-like
RPE_1368	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPE_1369	SSF69047	Hypothetical protein YjbJ
RPE_1370	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RPE_1370	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_1370	SSF52172	CheY-like
RPE_1370	SSF55785	PYP-like sensor domain (PAS domain)
RPE_1370	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_1371	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPE_1372	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPE_1373	SSF111369	HlyD-like secretion proteins
RPE_1374	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPE_1374	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPE_1374	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_1375	SSF46689	Homeodomain-like
RPE_1375	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_1376	SSF50475	FMN-binding split barrel
RPE_1377	SSF100950	NagB/RpiA/CoA transferase-like
RPE_1377	SSF46785	"Winged helix" DNA-binding domain
RPE_1378	SSF51905	FAD/NAD(P)-binding domain
RPE_1378	SSF54373	FAD-linked reductases, C-terminal domain
RPE_1379	SSF50331	MOP-like
RPE_1379	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1380	SSF50331	MOP-like
RPE_1380	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1381	SSF161098	MetI-like
RPE_1382	SSF161098	MetI-like
RPE_1384	SSF53850	Periplasmic binding protein-like II
RPE_1385	SSF51395	FMN-linked oxidoreductases
RPE_1388	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1389	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1390	SSF53822	Periplasmic binding protein-like I
RPE_1391	SSF47090	PGBD-like
RPE_1391	SSF53955	Lysozyme-like
RPE_1392	SSF143011	RelE-like
RPE_1394	SSF47413	lambda repressor-like DNA-binding domains
RPE_1395	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPE_1398	SSF56300	Metallo-dependent phosphatases
RPE_1399	SSF55811	Nudix
RPE_1400	SSF50182	Sm-like ribonucleoproteins
RPE_1400	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
RPE_1400	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
RPE_1401	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_1402	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_1403	SSF47598	Ribbon-helix-helix
RPE_1404	SSF56935	Porins
RPE_1409	SSF55895	Ribonuclease Rh-like
RPE_1410	SSF52374	Nucleotidylyl transferase
RPE_1410	SSF82114	Riboflavin kinase-like
RPE_1411	SSF51161	Trimeric LpxA-like enzymes
RPE_1414	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPE_1414	SSF50677	ValRS/IleRS/LeuRS editing domain
RPE_1414	SSF52374	Nucleotidylyl transferase
RPE_1417	SSF63411	LuxS/MPP-like metallohydrolase
RPE_1418	SSF63411	LuxS/MPP-like metallohydrolase
RPE_1419	SSF75620	Release factor
RPE_1420	SSF118116	DNA mismatch repair protein MutL
RPE_1420	SSF54211	Ribosomal protein S5 domain 2-like
RPE_1420	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_1421	SSF47598	Ribbon-helix-helix
RPE_1423	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
RPE_1424	SSF46785	"Winged helix" DNA-binding domain
RPE_1425	SSF52172	CheY-like
RPE_1426	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_1426	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_1427	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_1427	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1429	SSF52121	Lumazine synthase
RPE_1430	SSF53271	PRTase-like
RPE_1432	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
RPE_1433	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_1437	SSF50715	Ribosomal protein L25-like
RPE_1438	SSF53178	Peptidyl-tRNA hydrolase-like
RPE_1439	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1439	SSF81271	TGS-like
RPE_1441	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_1442	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_1446	SSF56529	FAH
RPE_1447	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1447	SSF90123	ABC transporter transmembrane region
RPE_1448	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1449	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_1450	SSF56784	HAD-like
RPE_1451	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_1452	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1453	SSF52374	Nucleotidylyl transferase
RPE_1453	SSF53613	Ribokinase-like
RPE_1454	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1455	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1455	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPE_1456	SSF53383	PLP-dependent transferases
RPE_1458	SSF53067	Actin-like ATPase domain
RPE_1460	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
RPE_1460	SSF56003	Molybdenum cofactor-binding domain
RPE_1461	SSF47175	Cytochromes
RPE_1462	SSF46626	Cytochrome c
RPE_1463	SSF53613	Ribokinase-like
RPE_1464	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_1465	SSF56300	Metallo-dependent phosphatases
RPE_1466	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_1467	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPE_1469	SSF103473	MFS general substrate transporter
RPE_1470	SSF51604	Enolase C-terminal domain-like
RPE_1470	SSF54826	Enolase N-terminal domain-like
RPE_1471	SSF52091	SpoIIaa-like
RPE_1472	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1474	SSF58113	Apolipoprotein A-I
RPE_1475	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RPE_1476	SSF54292	2Fe-2S ferredoxin-like
RPE_1477	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_1478	SSF51905	FAD/NAD(P)-binding domain
RPE_1481	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_1482	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_1482	SSF52172	CheY-like
RPE_1482	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_1483	SSF141868	EAL domain-like
RPE_1483	SSF55073	Nucleotide cyclase
RPE_1485	SSF55073	Nucleotide cyclase
RPE_1486	SSF47644	Methionine synthase domain
RPE_1486	SSF52242	Cobalamin (vitamin B12)-binding domain
RPE_1487	SSF52266	SGNH hydrolase
RPE_1488	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_1489	SSF47598	Ribbon-helix-helix
RPE_1491	SSF47240	Ferritin-like
RPE_1496	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_1497	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_1498	SSF53254	Phosphoglycerate mutase-like
RPE_1499	SSF51905	FAD/NAD(P)-binding domain
RPE_1500	SSF51316	Mss4-like
RPE_1503	SSF117143	Flagellar hook protein flgE
RPE_1504	SSF64518	Phase 1 flagellin
RPE_1505	SSF64518	Phase 1 flagellin
RPE_1506	SSF53697	SIS domain
RPE_1507	SSF56784	HAD-like
RPE_1508	SSF51569	Aldolase
RPE_1509	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1510	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1511	SSF52374	Nucleotidylyl transferase
RPE_1511	SSF53613	Ribokinase-like
RPE_1512	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1512	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPE_1513	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_1513	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1513	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
RPE_1514	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1515	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_1516	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1517	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_1518	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_1518	SSF52922	TK C-terminal domain-like
RPE_1519	SSF51182	RmlC-like cupins
RPE_1520	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_1521	SSF53383	PLP-dependent transferases
RPE_1522	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_1523	SSF64518	Phase 1 flagellin
RPE_1524	SSF48452	TPR-like
RPE_1524	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_1525	SSF64518	Phase 1 flagellin
RPE_1533	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
RPE_1533	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RPE_1534	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_1537	SSF117143	Flagellar hook protein flgE
RPE_1538	SSF117143	Flagellar hook protein flgE
RPE_1540	SSF101801	Surface presentation of antigens (SPOA)
RPE_1540	SSF103039	CheC-like
RPE_1542	SSF158791	MgtE N-terminal domain-like
RPE_1543	SSF48452	TPR-like
RPE_1544	SSF103473	MFS general substrate transporter
RPE_1545	SSF158472	HAMP domain-like
RPE_1545	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_1547	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_1547	SSF52172	CheY-like
RPE_1547	SSF55785	PYP-like sensor domain (PAS domain)
RPE_1547	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_1556	SSF160544	EscU C-terminal domain-like
RPE_1557	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_1557	SSF52172	CheY-like
RPE_1557	SSF55785	PYP-like sensor domain (PAS domain)
RPE_1557	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_1560	SSF54427	NTF2-like
RPE_1561	SSF56436	C-type lectin-like
RPE_1562	SSF47616	GST C-terminal domain-like
RPE_1562	SSF52833	Thioredoxin-like
RPE_1571	SSF117457	FumA C-terminal domain-like
RPE_1577	SSF46689	Homeodomain-like
RPE_1577	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_1578	SSF82199	SET domain
RPE_1580	SSF47413	lambda repressor-like DNA-binding domains
RPE_1581	SSF52833	Thioredoxin-like
RPE_1582	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_1583	SSF52129	Caspase-like
RPE_1592	SSF141371	PilZ domain-like
RPE_1594	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1594	SSF54752	RecA protein, C-terminal domain
RPE_1595	SSF53383	PLP-dependent transferases
RPE_1596	SSF51230	Single hybrid motif
RPE_1597	SSF101790	Aminomethyltransferase beta-barrel domain
RPE_1597	SSF103025	Folate-binding domain
RPE_1598	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
RPE_1598	SSF50447	Translation proteins
RPE_1598	SSF55186	ThrRS/AlaRS common domain
RPE_1598	SSF55681	Class II aaRS and biotin synthetases
RPE_1599	SSF50993	Peptidase/esterase 'gauge' domain
RPE_1599	SSF53474	alpha/beta-Hydrolases
RPE_1600	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1601	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1602	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPE_1603	SSF75217	alpha/beta knot
RPE_1604	SSF47598	Ribbon-helix-helix
RPE_1605	SSF54534	FKBP-like
RPE_1607	SSF56104	SAICAR synthase-like
RPE_1608	SSF82697	PurS-like
RPE_1610	SSF52317	Class I glutamine amidotransferase-like
RPE_1612	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_1613	SSF55326	PurM N-terminal domain-like
RPE_1613	SSF56042	PurM C-terminal domain-like
RPE_1616	SSF82657	BolA-like
RPE_1618	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_1619	SSF109854	DinB/YfiT-like putative metalloenzymes
RPE_1619	SSF56436	C-type lectin-like
RPE_1620	SSF52833	Thioredoxin-like
RPE_1621	SSF52949	Macro domain-like
RPE_1622	SSF56601	beta-lactamase/transpeptidase-like
RPE_1625	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPE_1627	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_1630	SSF53383	PLP-dependent transferases
RPE_1631	SSF55174	Alpha-L RNA-binding motif
RPE_1632	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_1633	SSF52777	CoA-dependent acyltransferases
RPE_1634	SSF51182	RmlC-like cupins
RPE_1635	SSF53681	Aspartate/glutamate racemase
RPE_1636	SSF81342	Transmembrane di-heme cytochromes
RPE_1637	SSF50800	PK beta-barrel domain-like
RPE_1638	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_1639	SSF47598	Ribbon-helix-helix
RPE_1640	SSF48557	L-aspartase-like
RPE_1642	SSF51366	Ribulose-phoshate binding barrel
RPE_1643	SSF47473	EF-hand
RPE_1644	SSF56266	DmpA/ArgJ-like
RPE_1646	SSF82771	GIY-YIG endonuclease
RPE_1647	SSF53822	Periplasmic binding protein-like I
RPE_1648	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1649	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1653	SSF53474	alpha/beta-Hydrolases
RPE_1654	SSF55961	Bet v1-like
RPE_1655	SSF47741	CO dehydrogenase ISP C-domain like
RPE_1655	SSF54292	2Fe-2S ferredoxin-like
RPE_1656	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
RPE_1656	SSF56176	FAD-binding/transporter-associated domain-like
RPE_1657	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1658	SSF53300	vWA-like
RPE_1661	SSF53218	Molybdenum cofactor biosynthesis proteins
RPE_1661	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_1662	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_1665	SSF46689	Homeodomain-like
RPE_1665	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_1666	SSF111369	HlyD-like secretion proteins
RPE_1667	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1673	SSF117396	TM1631-like
RPE_1674	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_1676	SSF51905	FAD/NAD(P)-binding domain
RPE_1676	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RPE_1677	SSF53613	Ribokinase-like
RPE_1678	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPE_1679	SSF46689	Homeodomain-like
RPE_1680	SSF111369	HlyD-like secretion proteins
RPE_1681	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPE_1681	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPE_1681	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_1682	SSF51905	FAD/NAD(P)-binding domain
RPE_1682	SSF54373	FAD-linked reductases, C-terminal domain
RPE_1684	SSF53474	alpha/beta-Hydrolases
RPE_1687	SSF53474	alpha/beta-Hydrolases
RPE_1687	SSF82784	OsmC-like
RPE_1688	SSF56524	Oxidoreductase molybdopterin-binding domain
RPE_1689	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1689	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RPE_1690	SSF53187	Zn-dependent exopeptidases
RPE_1691	SSF46785	"Winged helix" DNA-binding domain
RPE_1691	SSF53850	Periplasmic binding protein-like II
RPE_1692	SSF160920	PSTPO5379-like
RPE_1693	SSF53822	Periplasmic binding protein-like I
RPE_1696	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1697	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1698	SSF82771	GIY-YIG endonuclease
RPE_1699	SSF51658	Xylose isomerase-like
RPE_1701	SSF53901	Thiolase-like
RPE_1702	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1703	SSF52096	ClpP/crotonase
RPE_1704	SSF56112	Protein kinase-like (PK-like)
RPE_1706	SSF52833	Thioredoxin-like
RPE_1707	SSF56801	Acetyl-CoA synthetase-like
RPE_1708	SSF56601	beta-lactamase/transpeptidase-like
RPE_1709	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1709	SSF90123	ABC transporter transmembrane region
RPE_1711	SSF56770	HydA/Nqo6-like
RPE_1712	SSF143243	Nqo5-like
RPE_1712	SSF56762	HydB/Nqo4-like
RPE_1713	SSF52833	Thioredoxin-like
RPE_1714	SSF140490	Nqo1C-terminal domain-like
RPE_1714	SSF142019	Nqo1 FMN-binding domain-like
RPE_1714	SSF142984	Nqo1 middle domain-like
RPE_1715	SSF50692	ADC-like
RPE_1715	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
RPE_1715	SSF54292	2Fe-2S ferredoxin-like
RPE_1715	SSF54862	4Fe-4S ferredoxins
RPE_1717	SSF54862	4Fe-4S ferredoxins
RPE_1723	SSF53383	PLP-dependent transferases
RPE_1724	SSF46785	"Winged helix" DNA-binding domain
RPE_1724	SSF51206	cAMP-binding domain-like
RPE_1725	SSF52172	CheY-like
RPE_1726	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_1726	SSF52172	CheY-like
RPE_1727	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_1727	SSF55785	PYP-like sensor domain (PAS domain)
RPE_1727	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_1728	SSF54631	CBS-domain pair
RPE_1729	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_1730	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_1731	SSF53474	alpha/beta-Hydrolases
RPE_1732	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1732	SSF56112	Protein kinase-like (PK-like)
RPE_1733	SSF54631	CBS-domain pair
RPE_1734	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1734	SSF52210	Succinyl-CoA synthetase domains
RPE_1734	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_1734	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_1735	SSF81301	Nucleotidyltransferase
RPE_1737	SSF52091	SpoIIaa-like
RPE_1738	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1739	SSF159594	XCC0632-like
RPE_1740	SSF46626	Cytochrome c
RPE_1741	SSF46785	"Winged helix" DNA-binding domain
RPE_1741	SSF51206	cAMP-binding domain-like
RPE_1742	SSF51206	cAMP-binding domain-like
RPE_1742	SSF81324	Voltage-gated potassium channels
RPE_1747	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1749	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_1749	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_1751	SSF52172	CheY-like
RPE_1754	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_1757	SSF51645	Malate synthase G
RPE_1758	SSF161098	MetI-like
RPE_1759	SSF161098	MetI-like
RPE_1760	SSF53850	Periplasmic binding protein-like II
RPE_1761	SSF50447	Translation proteins
RPE_1761	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
RPE_1761	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1762	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_1763	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1763	SSF53790	Tetrapyrrole methylase
RPE_1763	SSF75615	Siroheme synthase middle domains-like
RPE_1765	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
RPE_1765	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
RPE_1767	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_1768	SSF53850	Periplasmic binding protein-like II
RPE_1769	SSF161098	MetI-like
RPE_1770	SSF161098	MetI-like
RPE_1771	SSF50331	MOP-like
RPE_1771	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1772	SSF55797	PR-1-like
RPE_1773	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1775	SSF47598	Ribbon-helix-helix
RPE_1778	SSF46785	"Winged helix" DNA-binding domain
RPE_1778	SSF51206	cAMP-binding domain-like
RPE_1779	SSF52129	Caspase-like
RPE_1780	SSF56801	Acetyl-CoA synthetase-like
RPE_1781	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1782	SSF52096	ClpP/crotonase
RPE_1783	SSF56801	Acetyl-CoA synthetase-like
RPE_1784	SSF46785	"Winged helix" DNA-binding domain
RPE_1784	SSF53850	Periplasmic binding protein-like II
RPE_1786	SSF103190	Sensory domain-like
RPE_1786	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_1786	SSF52172	CheY-like
RPE_1786	SSF55785	PYP-like sensor domain (PAS domain)
RPE_1786	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_1788	SSF141371	PilZ domain-like
RPE_1789	SSF109604	HD-domain/PDEase-like
RPE_1790	SSF51905	FAD/NAD(P)-binding domain
RPE_1791	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPE_1792	SSF103088	OmpA-like
RPE_1793	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1794	SSF53901	Thiolase-like
RPE_1795	SSF50249	Nucleic acid-binding proteins
RPE_1796	SSF75304	Amidase signature (AS) enzymes
RPE_1797	SSF56529	FAH
RPE_1798	SSF103473	MFS general substrate transporter
RPE_1801	SSF52467	DHS-like NAD/FAD-binding domain
RPE_1801	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_1802	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPE_1804	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_1806	SSF102114	Radical SAM enzymes
RPE_1808	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_1811	SSF48576	Terpenoid synthases
RPE_1812	SSF48576	Terpenoid synthases
RPE_1813	SSF51905	FAD/NAD(P)-binding domain
RPE_1814	SSF53167	Purine and uridine phosphorylases
RPE_1815	SSF102114	Radical SAM enzymes
RPE_1817	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_1819	SSF53383	PLP-dependent transferases
RPE_1820	SSF51905	FAD/NAD(P)-binding domain
RPE_1820	SSF54373	FAD-linked reductases, C-terminal domain
RPE_1821	SSF53187	Zn-dependent exopeptidases
RPE_1821	SSF55031	Bacterial exopeptidase dimerisation domain
RPE_1822	SSF47240	Ferritin-like
RPE_1823	SSF52141	Uracil-DNA glycosylase-like
RPE_1824	SSF102114	Radical SAM enzymes
RPE_1824	SSF47781	RuvA domain 2-like
RPE_1825	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1826	SSF56672	DNA/RNA polymerases
RPE_1828	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_1829	SSF159501	EreA/ChaN-like
RPE_1830	SSF47598	Ribbon-helix-helix
RPE_1834	SSF141868	EAL domain-like
RPE_1834	SSF55073	Nucleotide cyclase
RPE_1834	SSF55785	PYP-like sensor domain (PAS domain)
RPE_1836	SSF52096	ClpP/crotonase
RPE_1839	SSF55073	Nucleotide cyclase
RPE_1840	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_1840	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_1843	SSF51126	Pectin lyase-like
RPE_1845	SSF53182	Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
RPE_1846	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1849	SSF81301	Nucleotidyltransferase
RPE_1851	SSF143120	YefM-like
RPE_1852	SSF51703	Cobalamin (vitamin B12)-dependent enzymes
RPE_1852	SSF52242	Cobalamin (vitamin B12)-binding domain
RPE_1853	SSF51316	Mss4-like
RPE_1854	SSF51703	Cobalamin (vitamin B12)-dependent enzymes
RPE_1854	SSF52242	Cobalamin (vitamin B12)-binding domain
RPE_1855	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
RPE_1856	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RPE_1857	SSF51717	Dihydropteroate synthetase-like
RPE_1860	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1861	SSF53187	Zn-dependent exopeptidases
RPE_1862	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_1863	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_1865	SSF56601	beta-lactamase/transpeptidase-like
RPE_1870	SSF82649	SufE/NifU
RPE_1872	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_1872	SSF55785	PYP-like sensor domain (PAS domain)
RPE_1872	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_1873	SSF47090	PGBD-like
RPE_1879	SSF160935	VPA0735-like
RPE_1880	SSF53955	Lysozyme-like
RPE_1880	SSF56601	beta-lactamase/transpeptidase-like
RPE_1883	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_1884	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_1885	SSF158472	HAMP domain-like
RPE_1885	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_1887	SSF46689	Homeodomain-like
RPE_1887	SSF55785	PYP-like sensor domain (PAS domain)
RPE_1889	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_1894	SSF82771	GIY-YIG endonuclease
RPE_1896	SSF141371	PilZ domain-like
RPE_1898	SSF50789	Herpes virus serine proteinase, assemblin
RPE_1908	SSF56563	Major capsid protein gp5
RPE_1911	SSF48371	ARM repeat
RPE_1913	SSF50494	Trypsin-like serine proteases
RPE_1923	SSF54001	Cysteine proteinases
RPE_1924	SSF51445	(Trans)glycosidases
RPE_1926	SSF53955	Lysozyme-like
RPE_1928	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_1928	SSF52172	CheY-like
RPE_1929	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_1929	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_1932	SSF48452	TPR-like
RPE_1933	SSF82093	Heme chaperone CcmE
RPE_1936	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1937	SSF47240	Ferritin-like
RPE_1938	SSF47240	Ferritin-like
RPE_1938	SSF54292	2Fe-2S ferredoxin-like
RPE_1939	SSF50156	PDZ domain-like
RPE_1939	SSF50494	Trypsin-like serine proteases
RPE_1940	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_1940	SSF52172	CheY-like
RPE_1941	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_1942	SSF158472	HAMP domain-like
RPE_1942	SSF55073	Nucleotide cyclase
RPE_1943	SSF158472	HAMP domain-like
RPE_1943	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_1943	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_1944	SSF81301	Nucleotidyltransferase
RPE_1944	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
RPE_1946	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_1946	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_1948	SSF51658	Xylose isomerase-like
RPE_1951	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_1951	SSF55785	PYP-like sensor domain (PAS domain)
RPE_1951	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_1952	SSF160240	Cation efflux protein cytoplasmic domain-like
RPE_1952	SSF161111	Cation efflux protein transmembrane domain-like
RPE_1953	SSF56529	FAH
RPE_1954	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_1954	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1958	SSF89796	CoA-transferase family III (CaiB/BaiF)
RPE_1959	SSF46785	"Winged helix" DNA-binding domain
RPE_1959	SSF48008	GntR ligand-binding domain-like
RPE_1964	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_1964	SSF52172	CheY-like
RPE_1965	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_1967	SSF47729	IHF-like DNA-binding proteins
RPE_1972	SSF47598	Ribbon-helix-helix
RPE_1972	SSF55021	ACT-like
RPE_1975	SSF52096	ClpP/crotonase
RPE_1976	SSF51395	FMN-linked oxidoreductases
RPE_1977	SSF50630	Acid proteases
RPE_1978	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_1978	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_1979	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_1979	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_1980	SSF117916	Fe-S cluster assembly (FSCA) domain-like
RPE_1980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_1984	SSF102114	Radical SAM enzymes
RPE_1986	SSF56784	HAD-like
RPE_1987	SSF100950	NagB/RpiA/CoA transferase-like
RPE_1987	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
RPE_1989	SSF51905	FAD/NAD(P)-binding domain
RPE_1989	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RPE_1990	SSF53474	alpha/beta-Hydrolases
RPE_1991	SSF51569	Aldolase
RPE_1993	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_1993	SSF56317	Carbon-nitrogen hydrolase
RPE_1994	SSF88723	PIN domain-like
RPE_1995	SSF89447	AbrB/MazE/MraZ-like
RPE_1998	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPE_1998	SSF52374	Nucleotidylyl transferase
RPE_2001	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_2002	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
RPE_2002	SSF51569	Aldolase
RPE_2003	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPE_2004	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_2005	SSF55103	FAD-linked oxidases, C-terminal domain
RPE_2005	SSF56176	FAD-binding/transporter-associated domain-like
RPE_2006	SSF102405	MCP/YpsA-like
RPE_2007	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2007	SSF90123	ABC transporter transmembrane region
RPE_2011	SSF103088	OmpA-like
RPE_2013	SSF52821	Rhodanese/Cell cycle control phosphatase
RPE_2014	SSF53383	PLP-dependent transferases
RPE_2015	SSF53850	Periplasmic binding protein-like II
RPE_2019	SSF50129	GroES-like
RPE_2019	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_2020	SSF53901	Thiolase-like
RPE_2021	SSF53901	Thiolase-like
RPE_2022	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_2023	SSF47336	ACP-like
RPE_2026	SSF69118	AhpD-like
RPE_2027	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2028	SSF63829	Calcium-dependent phosphotriesterase
RPE_2029	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_2031	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2032	SSF55073	Nucleotide cyclase
RPE_2032	SSF55785	PYP-like sensor domain (PAS domain)
RPE_2034	SSF52821	Rhodanese/Cell cycle control phosphatase
RPE_2035	SSF52821	Rhodanese/Cell cycle control phosphatase
RPE_2037	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_2039	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2040	SSF88723	PIN domain-like
RPE_2041	SSF89447	AbrB/MazE/MraZ-like
RPE_2042	SSF47598	Ribbon-helix-helix
RPE_2044	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_2046	SSF57997	Tropomyosin
RPE_2047	SSF47090	PGBD-like
RPE_2047	SSF53955	Lysozyme-like
RPE_2048	SSF161098	MetI-like
RPE_2049	SSF161098	MetI-like
RPE_2050	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2051	SSF53850	Periplasmic binding protein-like II
RPE_2055	SSF47240	Ferritin-like
RPE_2056	SSF158472	HAMP domain-like
RPE_2056	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_2062	SSF47188	Hemerythrin-like
RPE_2062	SSF55073	Nucleotide cyclase
RPE_2066	SSF143422	Transposase IS200-like
RPE_2067	SSF81301	Nucleotidyltransferase
RPE_2070	SSF51391	Thiamin phosphate synthase
RPE_2071	SSF110399	ThiG-like
RPE_2072	SSF54285	MoaD/ThiS
RPE_2073	SSF51905	FAD/NAD(P)-binding domain
RPE_2073	SSF54373	FAD-linked reductases, C-terminal domain
RPE_2074	SSF50346	PRC-barrel domain
RPE_2075	SSF51905	FAD/NAD(P)-binding domain
RPE_2078	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_2080	SSF51338	Composite domain of metallo-dependent hydrolases
RPE_2080	SSF51556	Metallo-dependent hydrolases
RPE_2081	SSF46785	"Winged helix" DNA-binding domain
RPE_2081	SSF53850	Periplasmic binding protein-like II
RPE_2082	SSF51430	NAD(P)-linked oxidoreductase
RPE_2083	SSF50129	GroES-like
RPE_2083	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_2084	SSF46785	"Winged helix" DNA-binding domain
RPE_2086	SSF141868	EAL domain-like
RPE_2086	SSF55073	Nucleotide cyclase
RPE_2086	SSF55785	PYP-like sensor domain (PAS domain)
RPE_2087	SSF53146	Nitrogenase accessory factor-like
RPE_2091	SSF46689	Homeodomain-like
RPE_2091	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_2092	SSF111369	HlyD-like secretion proteins
RPE_2093	SSF103473	MFS general substrate transporter
RPE_2095	SSF56935	Porins
RPE_2096	SSF46785	"Winged helix" DNA-binding domain
RPE_2096	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_2097	SSF46689	Homeodomain-like
RPE_2098	SSF47090	PGBD-like
RPE_2098	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
RPE_2099	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_2099	SSF81799	Putative methyltransferase TM0872, insert domain
RPE_2101	SSF56519	Penicillin binding protein dimerisation domain
RPE_2101	SSF56601	beta-lactamase/transpeptidase-like
RPE_2102	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPE_2102	SSF53623	MurD-like peptide ligases, catalytic domain
RPE_2102	SSF63418	MurE/MurF N-terminal domain
RPE_2103	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPE_2103	SSF53623	MurD-like peptide ligases, catalytic domain
RPE_2103	SSF63418	MurE/MurF N-terminal domain
RPE_2105	SSF51984	MurCD N-terminal domain
RPE_2105	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPE_2105	SSF53623	MurD-like peptide ligases, catalytic domain
RPE_2107	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_2108	SSF51984	MurCD N-terminal domain
RPE_2108	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPE_2108	SSF53623	MurD-like peptide ligases, catalytic domain
RPE_2109	SSF82771	GIY-YIG endonuclease
RPE_2110	SSF56176	FAD-binding/transporter-associated domain-like
RPE_2110	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
RPE_2112	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_2113	SSF52440	PreATP-grasp domain
RPE_2113	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_2115	SSF53067	Actin-like ATPase domain
RPE_2116	SSF52490	Tubulin nucleotide-binding domain-like
RPE_2116	SSF55307	Tubulin C-terminal domain-like
RPE_2117	SSF54211	Ribosomal protein S5 domain 2-like
RPE_2118	SSF48452	TPR-like
RPE_2119	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2120	SSF82771	GIY-YIG endonuclease
RPE_2121	SSF47781	RuvA domain 2-like
RPE_2121	SSF50249	Nucleic acid-binding proteins
RPE_2121	SSF52113	BRCT domain
RPE_2121	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
RPE_2122	SSF103473	MFS general substrate transporter
RPE_2123	SSF53092	Creatinase/prolidase N-terminal domain
RPE_2123	SSF55920	Creatinase/aminopeptidase
RPE_2125	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_2126	SSF140931	Fic-like
RPE_2127	SSF51905	FAD/NAD(P)-binding domain
RPE_2128	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_2129	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_2132	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2134	SSF143100	TTHA1013/TTHA0281-like
RPE_2135	SSF143100	TTHA1013/TTHA0281-like
RPE_2136	SSF54786	YcfA/nrd intein domain
RPE_2137	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2139	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_2140	SSF55103	FAD-linked oxidases, C-terminal domain
RPE_2140	SSF56176	FAD-binding/transporter-associated domain-like
RPE_2144	SSF48557	L-aspartase-like
RPE_2145	SSF101738	SspB-like
RPE_2148	SSF53850	Periplasmic binding protein-like II
RPE_2149	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
RPE_2150	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
RPE_2153	SSF52151	FabD/lysophospholipase-like
RPE_2162	SSF56349	DNA breaking-rejoining enzymes
RPE_2164	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2166	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2167	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2168	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_2169	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_2170	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_2172	SSF140990	FtsH protease domain-like
RPE_2172	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2173	SSF47413	lambda repressor-like DNA-binding domains
RPE_2174	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
RPE_2177	SSF53597	Dihydrofolate reductase-like
RPE_2178	SSF117892	Band 7/SPFH domain
RPE_2179	SSF117892	Band 7/SPFH domain
RPE_2181	SSF50156	PDZ domain-like
RPE_2181	SSF50494	Trypsin-like serine proteases
RPE_2183	SSF64288	Chorismate lyase-like
RPE_2185	SSF56784	HAD-like
RPE_2186	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2187	SSF52467	DHS-like NAD/FAD-binding domain
RPE_2187	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_2188	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPE_2189	SSF55021	ACT-like
RPE_2191	SSF89447	AbrB/MazE/MraZ-like
RPE_2192	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
RPE_2195	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_2195	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_2196	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_2197	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_2198	SSF53649	Alkaline phosphatase-like
RPE_2200	SSF103473	MFS general substrate transporter
RPE_2201	SSF161098	MetI-like
RPE_2201	SSF53850	Periplasmic binding protein-like II
RPE_2202	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2205	SSF55811	Nudix
RPE_2206	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2207	SSF89447	AbrB/MazE/MraZ-like
RPE_2208	SSF102114	Radical SAM enzymes
RPE_2209	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
RPE_2209	SSF51569	Aldolase
RPE_2215	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_2217	SSF53790	Tetrapyrrole methylase
RPE_2218	SSF52317	Class I glutamine amidotransferase-like
RPE_2218	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2219	SSF53790	Tetrapyrrole methylase
RPE_2220	SSF159664	CobE/GbiG C-terminal domain-like
RPE_2221	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_2221	SSF53790	Tetrapyrrole methylase
RPE_2223	SSF53790	Tetrapyrrole methylase
RPE_2224	SSF53790	Tetrapyrrole methylase
RPE_2225	SSF63965	Precorrin-8X methylmutase CbiC/CobH
RPE_2227	SSF103501	Respiratory nitrate reductase 1 gamma chain
RPE_2228	SSF51905	FAD/NAD(P)-binding domain
RPE_2228	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
RPE_2229	SSF52733	Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
RPE_2230	SSF53790	Tetrapyrrole methylase
RPE_2232	SSF55469	FMN-dependent nitroreductase-like
RPE_2234	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2235	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2235	SSF90002	Hypothetical protein YjiA, C-terminal domain
RPE_2237	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2238	SSF52317	Class I glutamine amidotransferase-like
RPE_2238	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2240	SSF53383	PLP-dependent transferases
RPE_2243	SSF52096	ClpP/crotonase
RPE_2246	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_2246	SSF52172	CheY-like
RPE_2246	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_2247	SSF46626	Cytochrome c
RPE_2248	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_2248	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_2249	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_2249	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_2250	SSF47616	GST C-terminal domain-like
RPE_2250	SSF52833	Thioredoxin-like
RPE_2251	SSF46689	Homeodomain-like
RPE_2253	SSF56801	Acetyl-CoA synthetase-like
RPE_2254	SSF52096	ClpP/crotonase
RPE_2255	SSF51230	Single hybrid motif
RPE_2255	SSF51246	Rudiment single hybrid motif
RPE_2255	SSF52440	PreATP-grasp domain
RPE_2255	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_2256	SSF52096	ClpP/crotonase
RPE_2258	SSF56601	beta-lactamase/transpeptidase-like
RPE_2259	SSF103481	Multidrug resistance efflux transporter EmrE
RPE_2260	SSF53720	ALDH-like
RPE_2261	SSF143975	IlvD/EDD N-terminal domain-like
RPE_2261	SSF52016	LeuD/IlvD-like
RPE_2271	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_2272	SSF46785	"Winged helix" DNA-binding domain
RPE_2274	SSF46785	"Winged helix" DNA-binding domain
RPE_2275	SSF52129	Caspase-like
RPE_2276	SSF46785	"Winged helix" DNA-binding domain
RPE_2277	SSF53474	alpha/beta-Hydrolases
RPE_2278	SSF53474	alpha/beta-Hydrolases
RPE_2279	SSF82771	GIY-YIG endonuclease
RPE_2280	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_2281	SSF82771	GIY-YIG endonuclease
RPE_2282	SSF101327	YgfB-like
RPE_2282	SSF103642	Sec-C motif
RPE_2283	SSF48592	GroEL equatorial domain-like
RPE_2283	SSF52029	GroEL apical domain-like
RPE_2283	SSF54849	GroEL-intermediate domain like
RPE_2284	SSF50129	GroES-like
RPE_2287	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2289	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_2289	SSF52172	CheY-like
RPE_2289	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_2291	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_2292	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_2294	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPE_2295	SSF54001	Cysteine proteinases
RPE_2297	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_2298	SSF53218	Molybdenum cofactor biosynthesis proteins
RPE_2299	SSF53271	PRTase-like
RPE_2301	SSF51726	UROD/MetE-like
RPE_2302	SSF47616	GST C-terminal domain-like
RPE_2302	SSF52833	Thioredoxin-like
RPE_2303	SSF52833	Thioredoxin-like
RPE_2304	SSF50129	GroES-like
RPE_2304	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_2305	SSF52096	ClpP/crotonase
RPE_2307	SSF51905	FAD/NAD(P)-binding domain
RPE_2307	SSF54373	FAD-linked reductases, C-terminal domain
RPE_2310	SSF53474	alpha/beta-Hydrolases
RPE_2312	SSF51161	Trimeric LpxA-like enzymes
RPE_2316	SSF51161	Trimeric LpxA-like enzymes
RPE_2320	SSF46785	"Winged helix" DNA-binding domain
RPE_2323	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_2324	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_2324	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
RPE_2326	SSF141371	PilZ domain-like
RPE_2328	SSF46785	"Winged helix" DNA-binding domain
RPE_2328	SSF51206	cAMP-binding domain-like
RPE_2330	SSF144091	Rhomboid-like
RPE_2331	SSF54631	CBS-domain pair
RPE_2332	SSF52151	FabD/lysophospholipase-like
RPE_2334	SSF141868	EAL domain-like
RPE_2334	SSF55073	Nucleotide cyclase
RPE_2334	SSF55785	PYP-like sensor domain (PAS domain)
RPE_2335	SSF55469	FMN-dependent nitroreductase-like
RPE_2337	SSF52954	Class II aaRS ABD-related
RPE_2337	SSF55186	ThrRS/AlaRS common domain
RPE_2337	SSF55681	Class II aaRS and biotin synthetases
RPE_2337	SSF81271	TGS-like
RPE_2339	SSF103473	MFS general substrate transporter
RPE_2340	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_2341	SSF46689	Homeodomain-like
RPE_2344	SSF52096	ClpP/crotonase
RPE_2347	SSF82649	SufE/NifU
RPE_2348	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RPE_2349	SSF141734	HisI-like
RPE_2350	SSF55856	Cytochrome b5-like heme/steroid binding domain
RPE_2351	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
RPE_2351	SSF63380	Riboflavin synthase domain-like
RPE_2354	SSF53955	Lysozyme-like
RPE_2356	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RPE_2357	SSF52172	CheY-like
RPE_2358	SSF55073	Nucleotide cyclase
RPE_2359	SSF111331	NAD kinase/diacylglycerol kinase-like
RPE_2360	SSF48452	TPR-like
RPE_2362	SSF56925	OMPA-like
RPE_2363	SSF50249	Nucleic acid-binding proteins
RPE_2367	SSF52266	SGNH hydrolase
RPE_2372	SSF53901	Thiolase-like
RPE_2373	SSF56801	Acetyl-CoA synthetase-like
RPE_2374	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_2375	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_2375	SSF52210	Succinyl-CoA synthetase domains
RPE_2375	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_2376	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_2378	SSF51230	Single hybrid motif
RPE_2379	SSF46785	"Winged helix" DNA-binding domain
RPE_2379	SSF55781	GAF domain-like
RPE_2380	SSF52096	ClpP/crotonase
RPE_2381	SSF46689	Homeodomain-like
RPE_2381	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_2382	SSF53720	ALDH-like
RPE_2384	SSF88723	PIN domain-like
RPE_2385	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_2385	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_2386	SSF52096	ClpP/crotonase
RPE_2387	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_2387	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_2388	SSF56801	Acetyl-CoA synthetase-like
RPE_2389	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_2390	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_2391	SSF160996	HI0933 insert domain-like
RPE_2391	SSF51905	FAD/NAD(P)-binding domain
RPE_2392	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2394	SSF103515	Autotransporter
RPE_2394	SSF52743	Subtilisin-like
RPE_2395	SSF53597	Dihydrofolate reductase-like
RPE_2396	SSF88713	Glycoside hydrolase/deacetylase
RPE_2397	SSF52833	Thioredoxin-like
RPE_2398	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_2402	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_2404	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_2405	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_2409	SSF81901	HCP-like
RPE_2412	SSF52799	(Phosphotyrosine protein) phosphatases II
RPE_2415	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_2415	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_2416	SSF52218	Flavoproteins
RPE_2417	SSF161111	Cation efflux protein transmembrane domain-like
RPE_2420	SSF56918	Light-harvesting complex subunits
RPE_2423	SSF143011	RelE-like
RPE_2429	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2430	SSF53098	Ribonuclease H-like
RPE_2435	SSF48295	TrpR-like
RPE_2439	SSF140990	FtsH protease domain-like
RPE_2439	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2442	SSF47413	lambda repressor-like DNA-binding domains
RPE_2445	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2446	SSF158682	TerB-like
RPE_2447	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2448	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2451	SSF53850	Periplasmic binding protein-like II
RPE_2452	SSF141868	EAL domain-like
RPE_2452	SSF55073	Nucleotide cyclase
RPE_2452	SSF55785	PYP-like sensor domain (PAS domain)
RPE_2454	SSF54975	Acylphosphatase/BLUF domain-like
RPE_2458	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_2459	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_2460	SSF141868	EAL domain-like
RPE_2460	SSF55073	Nucleotide cyclase
RPE_2463	SSF56300	Metallo-dependent phosphatases
RPE_2464	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2464	SSF53474	alpha/beta-Hydrolases
RPE_2466	SSF81301	Nucleotidyltransferase
RPE_2467	SSF56019	The spindle assembly checkpoint protein mad2
RPE_2469	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2471	SSF47413	lambda repressor-like DNA-binding domains
RPE_2473	SSF53098	Ribonuclease H-like
RPE_2475	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2478	SSF56349	DNA breaking-rejoining enzymes
RPE_2480	SSF56349	DNA breaking-rejoining enzymes
RPE_2483	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2484	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_2485	SSF140990	FtsH protease domain-like
RPE_2485	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2487	SSF47413	lambda repressor-like DNA-binding domains
RPE_2492	SSF52151	FabD/lysophospholipase-like
RPE_2500	SSF158702	Sec63 N-terminal domain-like
RPE_2500	SSF52129	Caspase-like
RPE_2500	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2501	SSF51998	PFL-like glycyl radical enzymes
RPE_2501	SSF75625	YebC-like
RPE_2502	SSF103481	Multidrug resistance efflux transporter EmrE
RPE_2504	SSF58113	Apolipoprotein A-I
RPE_2505	SSF54368	Glutamine synthetase, N-terminal domain
RPE_2505	SSF55931	Glutamine synthetase/guanido kinase
RPE_2506	SSF54913	GlnB-like
RPE_2507	SSF53613	Ribokinase-like
RPE_2507	SSF64153	YjeF N-terminal domain-like
RPE_2508	SSF49503	Cupredoxins
RPE_2509	SSF102735	Trigger factor ribosome-binding domain
RPE_2509	SSF109998	Triger factor/SurA peptide-binding domain-like
RPE_2509	SSF54534	FKBP-like
RPE_2510	SSF52096	ClpP/crotonase
RPE_2511	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2511	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RPE_2512	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2512	SSF54211	Ribosomal protein S5 domain 2-like
RPE_2512	SSF88697	PUA domain-like
RPE_2514	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPE_2514	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPE_2514	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_2515	SSF111369	HlyD-like secretion proteins
RPE_2516	SSF53187	Zn-dependent exopeptidases
RPE_2516	SSF55031	Bacterial exopeptidase dimerisation domain
RPE_2517	SSF47729	IHF-like DNA-binding proteins
RPE_2518	SSF48439	Protein prenylyltransferase
RPE_2518	SSF48452	TPR-like
RPE_2518	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_2520	SSF56770	HydA/Nqo6-like
RPE_2521	SSF143243	Nqo5-like
RPE_2522	SSF158446	IVS-encoded protein-like
RPE_2523	SSF56762	HydB/Nqo4-like
RPE_2524	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_2525	SSF52833	Thioredoxin-like
RPE_2527	SSF140490	Nqo1C-terminal domain-like
RPE_2527	SSF142019	Nqo1 FMN-binding domain-like
RPE_2527	SSF142984	Nqo1 middle domain-like
RPE_2528	SSF57997	Tropomyosin
RPE_2529	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
RPE_2529	SSF54292	2Fe-2S ferredoxin-like
RPE_2529	SSF54862	4Fe-4S ferredoxins
RPE_2531	SSF54862	4Fe-4S ferredoxins
RPE_2537	SSF50037	C-terminal domain of transcriptional repressors
RPE_2537	SSF55681	Class II aaRS and biotin synthetases
RPE_2538	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_2539	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPE_2543	SSF110087	DR1885-like metal-binding protein
RPE_2544	SSF52954	Class II aaRS ABD-related
RPE_2544	SSF55681	Class II aaRS and biotin synthetases
RPE_2546	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2550	SSF160975	AF1531-like
RPE_2550	SSF89550	PHP domain-like
RPE_2552	SSF88723	PIN domain-like
RPE_2553	SSF52313	Ribosomal protein S2
RPE_2554	SSF46934	UBA-like
RPE_2554	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
RPE_2555	SSF53633	Carbamate kinase-like
RPE_2556	SSF55194	Ribosome recycling factor, RRF
RPE_2557	SSF64005	Undecaprenyl diphosphate synthase
RPE_2559	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_2559	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPE_2559	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
RPE_2560	SSF50156	PDZ domain-like
RPE_2562	SSF51161	Trimeric LpxA-like enzymes
RPE_2563	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_2564	SSF51161	Trimeric LpxA-like enzymes
RPE_2566	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_2567	SSF48256	Citrate synthase
RPE_2568	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
RPE_2568	SSF52374	Nucleotidylyl transferase
RPE_2569	SSF50715	Ribosomal protein L25-like
RPE_2569	SSF52374	Nucleotidylyl transferase
RPE_2571	SSF46785	"Winged helix" DNA-binding domain
RPE_2571	SSF51306	LexA/Signal peptidase
RPE_2572	SSF53218	Molybdenum cofactor biosynthesis proteins
RPE_2572	SSF63867	MoeA C-terminal domain-like
RPE_2572	SSF63882	MoeA N-terminal region -like
RPE_2575	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_2582	SSF56784	HAD-like
RPE_2583	SSF103088	OmpA-like
RPE_2584	SSF141371	PilZ domain-like
RPE_2585	SSF56784	HAD-like
RPE_2585	SSF81653	Calcium ATPase, transduction domain A
RPE_2585	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
RPE_2585	SSF81665	Calcium ATPase, transmembrane domain M
RPE_2586	SSF49764	HSP20-like chaperones
RPE_2588	SSF51161	Trimeric LpxA-like enzymes
RPE_2589	SSF55040	Molybdenum cofactor biosynthesis protein C, MoaC
RPE_2590	SSF51366	Ribulose-phoshate binding barrel
RPE_2591	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
RPE_2591	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
RPE_2592	SSF109998	Triger factor/SurA peptide-binding domain-like
RPE_2592	SSF54534	FKBP-like
RPE_2593	SSF51351	Triosephosphate isomerase (TIM)
RPE_2595	SSF52317	Class I glutamine amidotransferase-like
RPE_2595	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2596	SSF158837	AGR C 984p-like
RPE_2600	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPE_2601	SSF51569	Aldolase
RPE_2602	SSF46548	alpha-helical ferredoxin
RPE_2602	SSF47240	Ferritin-like
RPE_2602	SSF51971	Nucleotide-binding domain
RPE_2602	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
RPE_2602	SSF63380	Riboflavin synthase domain-like
RPE_2603	SSF46955	Putative DNA-binding domain
RPE_2603	SSF55781	GAF domain-like
RPE_2605	SSF51905	FAD/NAD(P)-binding domain
RPE_2605	SSF54373	FAD-linked reductases, C-terminal domain
RPE_2606	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RPE_2607	SSF51604	Enolase C-terminal domain-like
RPE_2607	SSF54826	Enolase N-terminal domain-like
RPE_2608	SSF50129	GroES-like
RPE_2608	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_2610	SSF52218	Flavoproteins
RPE_2612	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_2614	SSF51230	Single hybrid motif
RPE_2614	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_2614	SSF52922	TK C-terminal domain-like
RPE_2616	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
RPE_2616	SSF51230	Single hybrid motif
RPE_2616	SSF52777	CoA-dependent acyltransferases
RPE_2618	SSF51905	FAD/NAD(P)-binding domain
RPE_2618	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RPE_2621	SSF81901	HCP-like
RPE_2622	SSF56219	DNase I-like
RPE_2623	SSF111369	HlyD-like secretion proteins
RPE_2624	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPE_2624	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPE_2624	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_2625	SSF63712	Nicotinic receptor ligand binding domain-like
RPE_2626	SSF103190	Sensory domain-like
RPE_2627	SSF46689	Homeodomain-like
RPE_2629	SSF89360	HesB-like domain
RPE_2630	SSF109604	HD-domain/PDEase-like
RPE_2633	SSF48435	Bacterial muramidases
RPE_2633	SSF53955	Lysozyme-like
RPE_2636	SSF74653	TolA/TonB C-terminal domain
RPE_2637	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_2637	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_2639	SSF51126	Pectin lyase-like
RPE_2641	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2644	SSF56935	Porins
RPE_2645	SSF74653	TolA/TonB C-terminal domain
RPE_2646	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_2646	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_2648	SSF51126	Pectin lyase-like
RPE_2649	SSF74653	TolA/TonB C-terminal domain
RPE_2650	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_2650	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_2652	SSF51126	Pectin lyase-like
RPE_2653	SSF53098	Ribonuclease H-like
RPE_2654	SSF74653	TolA/TonB C-terminal domain
RPE_2655	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_2655	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_2657	SSF51126	Pectin lyase-like
RPE_2660	SSF54523	Pili subunits
RPE_2661	SSF54523	Pili subunits
RPE_2663	SSF160246	EspE N-terminal domain-like
RPE_2663	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2670	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_2670	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_2671	SSF48452	TPR-like
RPE_2671	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_2672	SSF48452	TPR-like
RPE_2672	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_2673	SSF53850	Periplasmic binding protein-like II
RPE_2674	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_2678	SSF52768	Arginase/deacetylase
RPE_2682	SSF56655	Carbohydrate phosphatase
RPE_2683	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2684	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_2684	SSF52922	TK C-terminal domain-like
RPE_2685	SSF51569	Aldolase
RPE_2686	SSF51649	RuBisCo, C-terminal domain
RPE_2686	SSF54966	RuBisCO, large subunit, small (N-terminal) domain
RPE_2687	SSF56784	HAD-like
RPE_2691	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPE_2691	SSF52374	Nucleotidylyl transferase
RPE_2691	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
RPE_2692	SSF110997	Sporulation related repeat
RPE_2693	SSF51445	(Trans)glycosidases
RPE_2695	SSF46785	"Winged helix" DNA-binding domain
RPE_2700	SSF46589	tRNA-binding arm
RPE_2700	SSF55681	Class II aaRS and biotin synthetases
RPE_2703	SSF64167	SurE-like
RPE_2704	SSF52172	CheY-like
RPE_2705	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_2706	SSF51261	Duplicated hybrid motif
RPE_2706	SSF54106	LysM domain
RPE_2708	SSF55248	PCD-like
RPE_2709	SSF53850	Periplasmic binding protein-like II
RPE_2710	SSF50447	Translation proteins
RPE_2710	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2710	SSF54980	EF-G C-terminal domain-like
RPE_2711	SSF54534	FKBP-like
RPE_2713	SSF56918	Light-harvesting complex subunits
RPE_2714	SSF56918	Light-harvesting complex subunits
RPE_2717	SSF53098	Ribonuclease H-like
RPE_2718	SSF74653	TolA/TonB C-terminal domain
RPE_2719	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_2719	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_2721	SSF51126	Pectin lyase-like
RPE_2722	SSF48239	Terpenoid cyclases/Protein prenyltransferases
RPE_2723	SSF53955	Lysozyme-like
RPE_2723	SSF56601	beta-lactamase/transpeptidase-like
RPE_2725	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
RPE_2726	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_2728	SSF53383	PLP-dependent transferases
RPE_2729	SSF53850	Periplasmic binding protein-like II
RPE_2730	SSF161098	MetI-like
RPE_2731	SSF161098	MetI-like
RPE_2732	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2734	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPE_2735	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_2737	SSF51905	FAD/NAD(P)-binding domain
RPE_2739	SSF56954	Outer membrane efflux proteins (OEP)
RPE_2740	SSF111369	HlyD-like secretion proteins
RPE_2741	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPE_2741	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPE_2741	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_2742	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPE_2742	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPE_2742	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_2747	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_2748	SSF56954	Outer membrane efflux proteins (OEP)
RPE_2750	SSF46589	tRNA-binding arm
RPE_2750	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPE_2750	SSF50677	ValRS/IleRS/LeuRS editing domain
RPE_2750	SSF52374	Nucleotidylyl transferase
RPE_2751	SSF50486	FMT C-terminal domain-like
RPE_2752	SSF102114	Radical SAM enzymes
RPE_2753	SSF55961	Bet v1-like
RPE_2754	SSF142433	CinA-like
RPE_2755	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_2755	SSF69765	IpsF-like
RPE_2756	SSF51395	FMN-linked oxidoreductases
RPE_2757	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_2757	SSF55785	PYP-like sensor domain (PAS domain)
RPE_2757	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_2758	SSF46689	Homeodomain-like
RPE_2758	SSF52172	CheY-like
RPE_2758	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2759	SSF158472	HAMP domain-like
RPE_2759	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_2759	SSF55785	PYP-like sensor domain (PAS domain)
RPE_2759	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_2760	SSF46689	Homeodomain-like
RPE_2760	SSF52172	CheY-like
RPE_2760	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2761	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
RPE_2762	SSF50182	Sm-like ribonucleoproteins
RPE_2763	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2764	SSF101904	GyrA/ParC C-terminal domain-like
RPE_2764	SSF56719	Type II DNA topoisomerase
RPE_2766	SSF52374	Nucleotidylyl transferase
RPE_2767	SSF50891	Cyclophilin-like
RPE_2768	SSF74653	TolA/TonB C-terminal domain
RPE_2769	SSF50891	Cyclophilin-like
RPE_2770	SSF111337	QueA-like
RPE_2771	SSF51713	tRNA-guanine transglycosylase
RPE_2774	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPE_2780	SSF51445	(Trans)glycosidases
RPE_2780	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_2782	SSF51445	(Trans)glycosidases
RPE_2785	SSF51161	Trimeric LpxA-like enzymes
RPE_2785	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_2786	SSF53697	SIS domain
RPE_2786	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPE_2788	SSF50249	Nucleic acid-binding proteins
RPE_2788	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2789	SSF109910	YgfY-like
RPE_2790	SSF141259	CarD-like
RPE_2790	SSF143517	TRCF domain-like
RPE_2790	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2792	SSF56801	Acetyl-CoA synthetase-like
RPE_2793	SSF53850	Periplasmic binding protein-like II
RPE_2795	SSF141255	YccV-like
RPE_2797	SSF51905	FAD/NAD(P)-binding domain
RPE_2800	SSF50129	GroES-like
RPE_2800	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_2802	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2806	SSF52200	Toll/Interleukin receptor TIR domain
RPE_2807	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_2808	SSF53383	PLP-dependent transferases
RPE_2810	SSF53597	Dihydrofolate reductase-like
RPE_2810	SSF53927	Cytidine deaminase-like
RPE_2811	SSF63380	Riboflavin synthase domain-like
RPE_2812	SSF52121	Lumazine synthase
RPE_2813	SSF48013	NusB-like
RPE_2814	SSF55326	PurM N-terminal domain-like
RPE_2814	SSF56042	PurM C-terminal domain-like
RPE_2817	SSF53474	alpha/beta-Hydrolases
RPE_2818	SSF56935	Porins
RPE_2819	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_2820	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_2820	SSF52172	CheY-like
RPE_2821	SSF53474	alpha/beta-Hydrolases
RPE_2825	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPE_2826	SSF53901	Thiolase-like
RPE_2827	SSF47729	IHF-like DNA-binding proteins
RPE_2828	SSF46955	Putative DNA-binding domain
RPE_2831	SSF56918	Light-harvesting complex subunits
RPE_2832	SSF56918	Light-harvesting complex subunits
RPE_2835	SSF46785	"Winged helix" DNA-binding domain
RPE_2835	SSF51206	cAMP-binding domain-like
RPE_2837	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RPE_2838	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RPE_2839	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2840	SSF53807	"Helical backbone" metal receptor
RPE_2842	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_2843	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_2845	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2846	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_2847	SSF88713	Glycoside hydrolase/deacetylase
RPE_2850	SSF54913	GlnB-like
RPE_2853	SSF53383	PLP-dependent transferases
RPE_2854	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_2855	SSF52096	ClpP/crotonase
RPE_2856	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_2857	SSF52161	Ribosomal protein L13
RPE_2858	SSF54211	Ribosomal protein S5 domain 2-like
RPE_2859	SSF55073	Nucleotide cyclase
RPE_2860	SSF54909	Dimeric alpha+beta barrel
RPE_2862	SSF50685	Barwin-like endoglucanases
RPE_2863	SSF53474	alpha/beta-Hydrolases
RPE_2864	SSF56601	beta-lactamase/transpeptidase-like
RPE_2864	SSF69189	Penicillin-binding protein associated domain
RPE_2865	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2866	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2867	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPE_2867	SSF52374	Nucleotidylyl transferase
RPE_2868	SSF51556	Metallo-dependent hydrolases
RPE_2869	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_2870	SSF46785	"Winged helix" DNA-binding domain
RPE_2870	SSF53850	Periplasmic binding protein-like II
RPE_2871	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPE_2872	SSF103473	MFS general substrate transporter
RPE_2873	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPE_2874	SSF56801	Acetyl-CoA synthetase-like
RPE_2877	SSF53649	Alkaline phosphatase-like
RPE_2878	SSF46785	"Winged helix" DNA-binding domain
RPE_2878	SSF53850	Periplasmic binding protein-like II
RPE_2879	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_2880	SSF103190	Sensory domain-like
RPE_2880	SSF158472	HAMP domain-like
RPE_2880	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_2881	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2883	SSF54909	Dimeric alpha+beta barrel
RPE_2884	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_2885	SSF101386	all-alpha NTP pyrophosphatases
RPE_2886	SSF54631	CBS-domain pair
RPE_2886	SSF56176	FAD-binding/transporter-associated domain-like
RPE_2888	SSF50249	Nucleic acid-binding proteins
RPE_2889	SSF56925	OMPA-like
RPE_2890	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2895	SSF56925	OMPA-like
RPE_2897	SSF81324	Voltage-gated potassium channels
RPE_2898	SSF57938	DnaJ/Hsp40 cysteine-rich domain
RPE_2899	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_2900	SSF158634	RPA2825-like
RPE_2903	SSF51905	FAD/NAD(P)-binding domain
RPE_2904	SSF48576	Terpenoid synthases
RPE_2905	SSF64076	MTH938-like
RPE_2906	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_2907	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_2909	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2910	SSF51569	Aldolase
RPE_2911	SSF51230	Single hybrid motif
RPE_2911	SSF51246	Rudiment single hybrid motif
RPE_2911	SSF52440	PreATP-grasp domain
RPE_2911	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_2912	SSF52096	ClpP/crotonase
RPE_2915	SSF53383	PLP-dependent transferases
RPE_2916	SSF56925	OMPA-like
RPE_2916	SSF69917	OMPT-like
RPE_2918	SSF50249	Nucleic acid-binding proteins
RPE_2919	SSF52467	DHS-like NAD/FAD-binding domain
RPE_2920	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPE_2921	SSF141371	PilZ domain-like
RPE_2928	SSF102114	Radical SAM enzymes
RPE_2929	SSF55681	Class II aaRS and biotin synthetases
RPE_2930	SSF50104	Translation proteins SH3-like domain
RPE_2930	SSF50249	Nucleic acid-binding proteins
RPE_2931	SSF51261	Duplicated hybrid motif
RPE_2932	SSF47090	PGBD-like
RPE_2932	SSF53955	Lysozyme-like
RPE_2934	SSF64182	DHH phosphoesterases
RPE_2935	SSF56784	HAD-like
RPE_2936	SSF56655	Carbohydrate phosphatase
RPE_2937	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_2937	SSF55021	ACT-like
RPE_2937	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPE_2938	SSF53383	PLP-dependent transferases
RPE_2940	SSF53474	alpha/beta-Hydrolases
RPE_2941	SSF141868	EAL domain-like
RPE_2941	SSF55073	Nucleotide cyclase
RPE_2941	SSF55785	PYP-like sensor domain (PAS domain)
RPE_2943	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_2944	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_2944	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPE_2946	SSF54211	Ribosomal protein S5 domain 2-like
RPE_2946	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_2946	SSF56719	Type II DNA topoisomerase
RPE_2947	SSF52833	Thioredoxin-like
RPE_2948	SSF110087	DR1885-like metal-binding protein
RPE_2952	SSF47413	lambda repressor-like DNA-binding domains
RPE_2956	SSF52129	Caspase-like
RPE_2957	SSF56935	Porins
RPE_2959	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2960	SSF55073	Nucleotide cyclase
RPE_2962	SSF89360	HesB-like domain
RPE_2963	SSF117916	Fe-S cluster assembly (FSCA) domain-like
RPE_2964	SSF53383	PLP-dependent transferases
RPE_2965	SSF101960	Stabilizer of iron transporter SufD
RPE_2966	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_2968	SSF101960	Stabilizer of iron transporter SufD
RPE_2969	SSF53383	PLP-dependent transferases
RPE_2970	SSF53474	alpha/beta-Hydrolases
RPE_2971	SSF53067	Actin-like ATPase domain
RPE_2972	SSF52374	Nucleotidylyl transferase
RPE_2972	SSF55174	Alpha-L RNA-binding motif
RPE_2974	SSF52833	Thioredoxin-like
RPE_2975	SSF51261	Duplicated hybrid motif
RPE_2976	SSF75620	Release factor
RPE_2977	SSF53955	Lysozyme-like
RPE_2977	SSF56601	beta-lactamase/transpeptidase-like
RPE_2978	SSF53187	Zn-dependent exopeptidases
RPE_2979	SSF50249	Nucleic acid-binding proteins
RPE_2980	SSF53383	PLP-dependent transferases
RPE_2981	SSF48452	TPR-like
RPE_2982	SSF53474	alpha/beta-Hydrolases
RPE_2983	SSF52833	Thioredoxin-like
RPE_2986	SSF52304	Type II 3-dehydroquinate dehydratase
RPE_2987	SSF51230	Single hybrid motif
RPE_2988	SSF51246	Rudiment single hybrid motif
RPE_2988	SSF52440	PreATP-grasp domain
RPE_2988	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_2989	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_2989	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_2990	SSF52172	CheY-like
RPE_2991	SSF52172	CheY-like
RPE_2991	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_2992	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_2993	SSF102114	Radical SAM enzymes
RPE_2994	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_2996	SSF53474	alpha/beta-Hydrolases
RPE_2998	SSF56925	OMPA-like
RPE_3000	SSF55073	Nucleotide cyclase
RPE_3002	SSF56925	OMPA-like
RPE_3003	SSF48452	TPR-like
RPE_3003	SSF56925	OMPA-like
RPE_3007	SSF46785	"Winged helix" DNA-binding domain
RPE_3009	SSF51569	Aldolase
RPE_3011	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_3013	SSF55136	Probable bacterial effector-binding domain
RPE_3014	SSF55781	GAF domain-like
RPE_3014	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_3017	SSF101904	GyrA/ParC C-terminal domain-like
RPE_3017	SSF56719	Type II DNA topoisomerase
RPE_3018	SSF50249	Nucleic acid-binding proteins
RPE_3018	SSF57863	ArfGap/RecO-like zinc finger
RPE_3019	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_3021	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3021	SSF54814	Prokaryotic type KH domain (KH-domain type II)
RPE_3022	SSF54768	dsRNA-binding domain-like
RPE_3022	SSF69065	RNase III domain-like
RPE_3023	SSF51306	LexA/Signal peptidase
RPE_3024	SSF56214	4'-phosphopantetheinyl transferase
RPE_3025	SSF63892	Pyridoxine 5'-phosphate synthase
RPE_3026	SSF109604	HD-domain/PDEase-like
RPE_3026	SSF55021	ACT-like
RPE_3026	SSF81271	TGS-like
RPE_3026	SSF81301	Nucleotidyltransferase
RPE_3027	SSF63562	RPB6/omega subunit-like
RPE_3029	SSF52141	Uracil-DNA glycosylase-like
RPE_3030	SSF74982	Small protein B (SmpB)
RPE_3031	SSF81330	Gated mechanosensitive channel
RPE_3032	SSF51569	Aldolase
RPE_3033	SSF46785	"Winged helix" DNA-binding domain
RPE_3034	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_3035	SSF51182	RmlC-like cupins
RPE_3036	SSF89562	RraA-like
RPE_3037	SSF160467	PH0987 N-terminal domain-like
RPE_3037	SSF50891	Cyclophilin-like
RPE_3038	SSF50891	Cyclophilin-like
RPE_3039	SSF88713	Glycoside hydrolase/deacetylase
RPE_3040	SSF102114	Radical SAM enzymes
RPE_3041	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3045	SSF50447	Translation proteins
RPE_3045	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3045	SSF54980	EF-G C-terminal domain-like
RPE_3046	SSF103481	Multidrug resistance efflux transporter EmrE
RPE_3048	SSF109755	PhoU-like
RPE_3053	SSF53822	Periplasmic binding protein-like I
RPE_3054	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3055	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3057	SSF50800	PK beta-barrel domain-like
RPE_3057	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPE_3058	SSF52833	Thioredoxin-like
RPE_3061	SSF140478	LemA-like
RPE_3063	SSF51905	FAD/NAD(P)-binding domain
RPE_3063	SSF54427	NTF2-like
RPE_3066	SSF64307	SirA-like
RPE_3067	SSF51905	FAD/NAD(P)-binding domain
RPE_3067	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RPE_3068	SSF51905	FAD/NAD(P)-binding domain
RPE_3068	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RPE_3069	SSF46626	Cytochrome c
RPE_3071	SSF46626	Cytochrome c
RPE_3072	SSF56524	Oxidoreductase molybdopterin-binding domain
RPE_3072	SSF81296	E set domains
RPE_3073	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
RPE_3073	SSF56300	Metallo-dependent phosphatases
RPE_3074	SSF81296	E set domains
RPE_3076	SSF46626	Cytochrome c
RPE_3077	SSF46626	Cytochrome c
RPE_3078	SSF143744	GlcG-like
RPE_3079	SSF52833	Thioredoxin-like
RPE_3081	SSF52833	Thioredoxin-like
RPE_3082	SSF46785	"Winged helix" DNA-binding domain
RPE_3084	SSF54862	4Fe-4S ferredoxins
RPE_3086	SSF47175	Cytochromes
RPE_3087	SSF81342	Transmembrane di-heme cytochromes
RPE_3089	SSF160448	PG1857-like
RPE_3090	SSF52218	Flavoproteins
RPE_3091	SSF47240	Ferritin-like
RPE_3093	SSF47240	Ferritin-like
RPE_3094	SSF54862	4Fe-4S ferredoxins
RPE_3095	SSF49503	Cupredoxins
RPE_3095	SSF50974	Nitrous oxide reductase, N-terminal domain
RPE_3096	SSF51126	Pectin lyase-like
RPE_3097	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3099	SSF160387	NosL/MerB-like
RPE_3100	SSF143631	ApbE-like
RPE_3101	SSF51998	PFL-like glycyl radical enzymes
RPE_3102	SSF102114	Radical SAM enzymes
RPE_3103	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3104	SSF51338	Composite domain of metallo-dependent hydrolases
RPE_3104	SSF51556	Metallo-dependent hydrolases
RPE_3105	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3106	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3109	SSF159709	PhnH-like
RPE_3111	SSF46785	"Winged helix" DNA-binding domain
RPE_3111	SSF64288	Chorismate lyase-like
RPE_3112	SSF161098	MetI-like
RPE_3113	SSF161098	MetI-like
RPE_3114	SSF53850	Periplasmic binding protein-like II
RPE_3115	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3116	SSF51161	Trimeric LpxA-like enzymes
RPE_3117	SSF51338	Composite domain of metallo-dependent hydrolases
RPE_3117	SSF51556	Metallo-dependent hydrolases
RPE_3119	SSF55229	Cell division protein MinE topological specificity domain
RPE_3120	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3121	SSF63848	Cell-division inhibitor MinC, C-terminal domain
RPE_3122	SSF52317	Class I glutamine amidotransferase-like
RPE_3122	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3126	SSF53807	"Helical backbone" metal receptor
RPE_3127	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3128	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RPE_3129	SSF55961	Bet v1-like
RPE_3130	SSF53300	vWA-like
RPE_3132	SSF53300	vWA-like
RPE_3134	SSF53300	vWA-like
RPE_3135	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3136	SSF48666	Methanol dehydrogenase subunit
RPE_3137	SSF46626	Cytochrome c
RPE_3138	SSF53850	Periplasmic binding protein-like II
RPE_3139	SSF50998	Quinoprotein alcohol dehydrogenase-like
RPE_3141	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_3142	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_3142	SSF52172	CheY-like
RPE_3143	SSF46785	"Winged helix" DNA-binding domain
RPE_3144	SSF74653	TolA/TonB C-terminal domain
RPE_3147	SSF144064	Heme iron utilization protein-like
RPE_3148	SSF54909	Dimeric alpha+beta barrel
RPE_3149	SSF56935	Porins
RPE_3150	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3151	SSF102114	Radical SAM enzymes
RPE_3153	SSF53807	"Helical backbone" metal receptor
RPE_3154	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RPE_3155	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3161	SSF53474	alpha/beta-Hydrolases
RPE_3162	SSF53067	Actin-like ATPase domain
RPE_3163	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPE_3163	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_3164	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3165	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_3166	SSF53383	PLP-dependent transferases
RPE_3166	SSF55904	Ornithine decarboxylase C-terminal domain
RPE_3169	SSF51726	UROD/MetE-like
RPE_3171	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPE_3172	SSF103378	2-methylcitrate dehydratase PrpD
RPE_3173	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_3174	SSF47413	lambda repressor-like DNA-binding domains
RPE_3175	SSF102114	Radical SAM enzymes
RPE_3176	SSF51998	PFL-like glycyl radical enzymes
RPE_3177	SSF47240	Ferritin-like
RPE_3180	SSF53850	Periplasmic binding protein-like II
RPE_3181	SSF56801	Acetyl-CoA synthetase-like
RPE_3182	SSF53850	Periplasmic binding protein-like II
RPE_3183	SSF161098	MetI-like
RPE_3184	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3184	SSF55021	ACT-like
RPE_3185	SSF51161	Trimeric LpxA-like enzymes
RPE_3186	SSF53383	PLP-dependent transferases
RPE_3188	SSF53807	"Helical backbone" metal receptor
RPE_3189	SSF53807	"Helical backbone" metal receptor
RPE_3190	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3191	SSF102114	Radical SAM enzymes
RPE_3192	SSF53850	Periplasmic binding protein-like II
RPE_3193	SSF51679	Bacterial luciferase-like
RPE_3194	SSF161098	MetI-like
RPE_3195	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3196	SSF50475	FMN-binding split barrel
RPE_3197	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3199	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_3200	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_3201	SSF52467	DHS-like NAD/FAD-binding domain
RPE_3201	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_3202	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3202	SSF52210	Succinyl-CoA synthetase domains
RPE_3203	SSF52210	Succinyl-CoA synthetase domains
RPE_3203	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_3204	SSF53720	ALDH-like
RPE_3205	SSF53850	Periplasmic binding protein-like II
RPE_3207	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3208	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3210	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_3211	SSF53822	Periplasmic binding protein-like I
RPE_3212	SSF89796	CoA-transferase family III (CaiB/BaiF)
RPE_3213	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
RPE_3213	SSF56003	Molybdenum cofactor-binding domain
RPE_3214	SSF47741	CO dehydrogenase ISP C-domain like
RPE_3214	SSF54292	2Fe-2S ferredoxin-like
RPE_3215	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
RPE_3215	SSF56176	FAD-binding/transporter-associated domain-like
RPE_3218	SSF56801	Acetyl-CoA synthetase-like
RPE_3219	SSF53901	Thiolase-like
RPE_3220	SSF46785	"Winged helix" DNA-binding domain
RPE_3220	SSF48008	GntR ligand-binding domain-like
RPE_3221	SSF54909	Dimeric alpha+beta barrel
RPE_3222	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_3222	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_3223	SSF52242	Cobalamin (vitamin B12)-binding domain
RPE_3224	SSF51703	Cobalamin (vitamin B12)-dependent enzymes
RPE_3225	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3225	SSF52096	ClpP/crotonase
RPE_3226	SSF55298	YjgF-like
RPE_3227	SSF56801	Acetyl-CoA synthetase-like
RPE_3228	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3229	SSF51395	FMN-linked oxidoreductases
RPE_3229	SSF51905	FAD/NAD(P)-binding domain
RPE_3230	SSF46785	"Winged helix" DNA-binding domain
RPE_3231	SSF54975	Acylphosphatase/BLUF domain-like
RPE_3233	SSF89447	AbrB/MazE/MraZ-like
RPE_3234	SSF88723	PIN domain-like
RPE_3236	SSF143120	YefM-like
RPE_3237	SSF88723	PIN domain-like
RPE_3238	SSF51126	Pectin lyase-like
RPE_3240	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_3240	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_3246	SSF88723	PIN domain-like
RPE_3252	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_3253	SSF52980	Restriction endonuclease-like
RPE_3254	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_3259	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3261	SSF56349	DNA breaking-rejoining enzymes
RPE_3262	SSF52317	Class I glutamine amidotransferase-like
RPE_3262	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_3262	SSF54810	GMP synthetase C-terminal dimerisation domain
RPE_3263	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_3264	SSF161084	MAPEG domain-like
RPE_3266	SSF50129	GroES-like
RPE_3266	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3268	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
RPE_3268	SSF54631	CBS-domain pair
RPE_3271	SSF103473	MFS general substrate transporter
RPE_3272	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_3273	SSF53067	Actin-like ATPase domain
RPE_3275	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3275	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RPE_3275	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPE_3276	SSF50249	Nucleic acid-binding proteins
RPE_3276	SSF55261	GAD domain-like
RPE_3276	SSF55681	Class II aaRS and biotin synthetases
RPE_3278	SSF47819	HRDC-like
RPE_3278	SSF53098	Ribonuclease H-like
RPE_3280	SSF109604	HD-domain/PDEase-like
RPE_3280	SSF53067	Actin-like ATPase domain
RPE_3281	SSF140356	PPK N-terminal domain-like
RPE_3281	SSF143724	PHP14-like
RPE_3281	SSF56024	Phospholipase D/nuclease
RPE_3282	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3284	SSF55326	PurM N-terminal domain-like
RPE_3284	SSF56042	PurM C-terminal domain-like
RPE_3285	SSF53328	Formyltransferase
RPE_3286	SSF50249	Nucleic acid-binding proteins
RPE_3287	SSF54919	Nucleoside diphosphate kinase, NDK
RPE_3288	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3290	SSF102400	DNA polymerase III chi subunit
RPE_3291	SSF52949	Macro domain-like
RPE_3291	SSF53187	Zn-dependent exopeptidases
RPE_3295	SSF109998	Triger factor/SurA peptide-binding domain-like
RPE_3296	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPE_3297	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_3298	SSF50129	GroES-like
RPE_3298	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3301	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3304	SSF53901	Thiolase-like
RPE_3305	SSF47336	ACP-like
RPE_3306	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3307	SSF52151	FabD/lysophospholipase-like
RPE_3307	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
RPE_3308	SSF55073	Nucleotide cyclase
RPE_3309	SSF54995	Ribosomal protein S6
RPE_3310	SSF46911	Ribosomal protein S18
RPE_3315	SSF55653	Ribosomal protein L9 C-domain
RPE_3315	SSF55658	L9 N-domain-like
RPE_3317	SSF48024	N-terminal domain of DnaB helicase
RPE_3317	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3318	SSF51306	LexA/Signal peptidase
RPE_3318	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3321	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3322	SSF111369	HlyD-like secretion proteins
RPE_3323	SSF158472	HAMP domain-like
RPE_3323	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_3323	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_3324	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_3324	SSF52172	CheY-like
RPE_3326	SSF111369	HlyD-like secretion proteins
RPE_3327	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPE_3327	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPE_3327	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_3328	SSF56954	Outer membrane efflux proteins (OEP)
RPE_3332	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_3333	SSF55073	Nucleotide cyclase
RPE_3334	SSF50621	Alanine racemase C-terminal domain-like
RPE_3334	SSF51419	PLP-binding barrel
RPE_3335	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_3337	SSF51316	Mss4-like
RPE_3338	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3338	SSF54211	Ribosomal protein S5 domain 2-like
RPE_3340	SSF53271	PRTase-like
RPE_3340	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPE_3341	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3344	SSF103473	MFS general substrate transporter
RPE_3345	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3348	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPE_3350	SSF53850	Periplasmic binding protein-like II
RPE_3352	SSF81901	HCP-like
RPE_3356	SSF55931	Glutamine synthetase/guanido kinase
RPE_3356	SSF89095	GatB/YqeY motif
RPE_3357	SSF52151	FabD/lysophospholipase-like
RPE_3358	SSF75304	Amidase signature (AS) enzymes
RPE_3362	SSF141000	Glu-tRNAGln amidotransferase C subunit
RPE_3363	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
RPE_3365	SSF102198	Putative cyclase
RPE_3366	SSF46689	Homeodomain-like
RPE_3366	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_3367	SSF51905	FAD/NAD(P)-binding domain
RPE_3368	SSF53098	Ribonuclease H-like
RPE_3370	SSF46785	"Winged helix" DNA-binding domain
RPE_3370	SSF51206	cAMP-binding domain-like
RPE_3371	SSF46785	"Winged helix" DNA-binding domain
RPE_3371	SSF51206	cAMP-binding domain-like
RPE_3372	SSF55166	Hedgehog/DD-peptidase
RPE_3373	SSF53671	Aspartate/ornithine carbamoyltransferase
RPE_3374	SSF51338	Composite domain of metallo-dependent hydrolases
RPE_3374	SSF51556	Metallo-dependent hydrolases
RPE_3377	SSF102405	MCP/YpsA-like
RPE_3379	SSF56712	Prokaryotic type I DNA topoisomerase
RPE_3379	SSF57783	Zinc beta-ribbon
RPE_3380	SSF50249	Nucleic acid-binding proteins
RPE_3382	SSF55811	Nudix
RPE_3383	SSF57829	Zn-binding ribosomal proteins
RPE_3384	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_3385	SSF52172	CheY-like
RPE_3385	SSF55073	Nucleotide cyclase
RPE_3386	SSF52172	CheY-like
RPE_3388	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
RPE_3388	SSF56672	DNA/RNA polymerases
RPE_3391	SSF55298	YjgF-like
RPE_3392	SSF51695	PLC-like phosphodiesterases
RPE_3393	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_3394	SSF54197	HIT-like
RPE_3395	SSF118196	YaeB-like
RPE_3398	SSF141371	PilZ domain-like
RPE_3399	SSF53955	Lysozyme-like
RPE_3400	SSF53383	PLP-dependent transferases
RPE_3401	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3402	SSF53383	PLP-dependent transferases
RPE_3404	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3404	SSF81923	Double Clp-N motif
RPE_3405	SSF54736	ClpS-like
RPE_3406	SSF53300	vWA-like
RPE_3407	SSF56601	beta-lactamase/transpeptidase-like
RPE_3408	SSF46565	Chaperone J-domain
RPE_3409	SSF53300	vWA-like
RPE_3410	SSF140931	Fic-like
RPE_3411	SSF47413	lambda repressor-like DNA-binding domains
RPE_3412	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3413	SSF52374	Nucleotidylyl transferase
RPE_3417	SSF47616	GST C-terminal domain-like
RPE_3417	SSF52833	Thioredoxin-like
RPE_3418	SSF46785	"Winged helix" DNA-binding domain
RPE_3420	SSF51430	NAD(P)-linked oxidoreductase
RPE_3421	SSF47413	lambda repressor-like DNA-binding domains
RPE_3422	SSF158791	MgtE N-terminal domain-like
RPE_3422	SSF161093	MgtE membrane domain-like
RPE_3422	SSF54631	CBS-domain pair
RPE_3423	SSF88713	Glycoside hydrolase/deacetylase
RPE_3424	SSF88713	Glycoside hydrolase/deacetylase
RPE_3426	SSF53474	alpha/beta-Hydrolases
RPE_3427	SSF52374	Nucleotidylyl transferase
RPE_3427	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_3429	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPE_3430	SSF100950	NagB/RpiA/CoA transferase-like
RPE_3433	SSF143120	YefM-like
RPE_3434	SSF88723	PIN domain-like
RPE_3435	SSF101801	Surface presentation of antigens (SPOA)
RPE_3436	SSF55681	Class II aaRS and biotin synthetases
RPE_3437	SSF54975	Acylphosphatase/BLUF domain-like
RPE_3438	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPE_3439	SSF51230	Single hybrid motif
RPE_3439	SSF51246	Rudiment single hybrid motif
RPE_3439	SSF52440	PreATP-grasp domain
RPE_3439	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_3442	SSF48173	Cryptochrome/photolyase FAD-binding domain
RPE_3442	SSF52425	Cryptochrome/photolyase, N-terminal domain
RPE_3444	SSF103481	Multidrug resistance efflux transporter EmrE
RPE_3445	SSF55073	Nucleotide cyclase
RPE_3448	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_3448	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_3449	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_3449	SSF52172	CheY-like
RPE_3451	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_3452	SSF56300	Metallo-dependent phosphatases
RPE_3454	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_3455	SSF52172	CheY-like
RPE_3457	SSF53955	Lysozyme-like
RPE_3460	SSF109998	Triger factor/SurA peptide-binding domain-like
RPE_3460	SSF54534	FKBP-like
RPE_3463	SSF74653	TolA/TonB C-terminal domain
RPE_3466	SSF49899	Concanavalin A-like lectins/glucanases
RPE_3470	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_3470	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_3471	SSF74653	TolA/TonB C-terminal domain
RPE_3472	SSF74653	TolA/TonB C-terminal domain
RPE_3474	SSF50494	Trypsin-like serine proteases
RPE_3475	SSF51126	Pectin lyase-like
RPE_3477	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_3477	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_3478	SSF74653	TolA/TonB C-terminal domain
RPE_3479	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPE_3479	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPE_3479	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_3480	SSF111369	HlyD-like secretion proteins
RPE_3481	SSF46689	Homeodomain-like
RPE_3483	SSF56935	Porins
RPE_3485	SSF118196	YaeB-like
RPE_3486	SSF53807	"Helical backbone" metal receptor
RPE_3487	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RPE_3488	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3490	SSF46785	"Winged helix" DNA-binding domain
RPE_3490	SSF50331	MOP-like
RPE_3491	SSF51126	Pectin lyase-like
RPE_3492	SSF53738	Phosphoglucomutase, first 3 domains
RPE_3492	SSF55957	Phosphoglucomutase, C-terminal domain
RPE_3493	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_3495	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3497	SSF51182	RmlC-like cupins
RPE_3497	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_3498	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3503	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3505	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_3505	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3505	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
RPE_3506	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_3507	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_3508	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3509	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_3510	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_3511	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3511	SSF90123	ABC transporter transmembrane region
RPE_3513	SSF51120	beta-Roll
RPE_3513	SSF51126	Pectin lyase-like
RPE_3514	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_3514	SSF52172	CheY-like
RPE_3515	SSF52172	CheY-like
RPE_3518	SSF48295	TrpR-like
RPE_3521	SSF158472	HAMP domain-like
RPE_3521	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_3522	SSF158472	HAMP domain-like
RPE_3522	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_3523	SSF46689	Homeodomain-like
RPE_3524	SSF158472	HAMP domain-like
RPE_3524	SSF55785	PYP-like sensor domain (PAS domain)
RPE_3524	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_3525	SSF46626	Cytochrome c
RPE_3525	SSF50998	Quinoprotein alcohol dehydrogenase-like
RPE_3526	SSF55811	Nudix
RPE_3527	SSF51569	Aldolase
RPE_3528	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_3529	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_3529	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
RPE_3535	SSF50494	Trypsin-like serine proteases
RPE_3535	SSF54060	His-Me finger endonucleases
RPE_3536	SSF51695	PLC-like phosphodiesterases
RPE_3537	SSF63840	Ribonuclease domain of colicin E3
RPE_3541	SSF52096	ClpP/crotonase
RPE_3542	SSF56601	beta-lactamase/transpeptidase-like
RPE_3543	SSF160544	EscU C-terminal domain-like
RPE_3545	SSF160909	ATP12-like
RPE_3547	SSF55120	Pseudouridine synthase
RPE_3547	SSF55174	Alpha-L RNA-binding motif
RPE_3549	SSF55469	FMN-dependent nitroreductase-like
RPE_3550	SSF55469	FMN-dependent nitroreductase-like
RPE_3551	SSF54975	Acylphosphatase/BLUF domain-like
RPE_3552	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_3553	SSF111038	YjbQ-like
RPE_3554	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPE_3555	SSF53822	Periplasmic binding protein-like I
RPE_3556	SSF48019	post-AAA+ oligomerization domain-like
RPE_3556	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3557	SSF50156	PDZ domain-like
RPE_3557	SSF50494	Trypsin-like serine proteases
RPE_3558	SSF50129	GroES-like
RPE_3558	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3559	SSF51316	Mss4-like
RPE_3560	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3561	SSF64263	Prokaryotic ribosomal protein L17
RPE_3562	SSF47789	C-terminal domain of RNA polymerase alpha subunit
RPE_3562	SSF55257	RBP11-like subunits of RNA polymerase
RPE_3562	SSF56553	Insert subdomain of RNA polymerase alpha subunit
RPE_3563	SSF53137	Translational machinery components
RPE_3564	SSF46946	S13-like H2TH domain
RPE_3565	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3566	SSF103491	Preprotein translocase SecY subunit
RPE_3567	SSF52080	Ribosomal proteins L15p and L18e
RPE_3568	SSF55129	Ribosomal protein L30p/L7e
RPE_3569	SSF54211	Ribosomal protein S5 domain 2-like
RPE_3569	SSF54768	dsRNA-binding domain-like
RPE_3570	SSF53137	Translational machinery components
RPE_3571	SSF56053	Ribosomal protein L6
RPE_3572	SSF56047	Ribosomal protein S8
RPE_3573	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RPE_3574	SSF55282	RL5-like
RPE_3575	SSF50104	Translation proteins SH3-like domain
RPE_3576	SSF50193	Ribosomal protein L14
RPE_3577	SSF50249	Nucleic acid-binding proteins
RPE_3578	SSF46561	Ribosomal protein L29 (L29p)
RPE_3579	SSF54686	Ribosomal protein L16p/L10e
RPE_3580	SSF54814	Prokaryotic type KH domain (KH-domain type II)
RPE_3580	SSF54821	Ribosomal protein S3 C-terminal domain
RPE_3581	SSF54843	Ribosomal protein L22
RPE_3582	SSF54570	Ribosomal protein S19
RPE_3583	SSF50104	Translation proteins SH3-like domain
RPE_3583	SSF50249	Nucleic acid-binding proteins
RPE_3584	SSF54189	Ribosomal proteins S24e, L23 and L15e
RPE_3585	SSF52166	Ribosomal protein L4
RPE_3586	SSF50447	Translation proteins
RPE_3587	SSF54999	Ribosomal protein S10
RPE_3588	SSF50447	Translation proteins
RPE_3588	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
RPE_3588	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3589	SSF50447	Translation proteins
RPE_3589	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3589	SSF54211	Ribosomal protein S5 domain 2-like
RPE_3589	SSF54980	EF-G C-terminal domain-like
RPE_3590	SSF47973	Ribosomal protein S7
RPE_3591	SSF50249	Nucleic acid-binding proteins
RPE_3592	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_3593	SSF51905	FAD/NAD(P)-binding domain
RPE_3594	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3594	SSF90123	ABC transporter transmembrane region
RPE_3595	SSF51905	FAD/NAD(P)-binding domain
RPE_3595	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_3595	SSF54373	FAD-linked reductases, C-terminal domain
RPE_3596	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
RPE_3597	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
RPE_3598	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
RPE_3598	SSF54736	ClpS-like
RPE_3599	SSF160369	Ribosomal protein L10-like
RPE_3602	SSF48695	Multiheme cytochromes
RPE_3603	SSF56003	Molybdenum cofactor-binding domain
RPE_3604	SSF47741	CO dehydrogenase ISP C-domain like
RPE_3604	SSF54292	2Fe-2S ferredoxin-like
RPE_3605	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3605	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RPE_3606	SSF56808	Ribosomal protein L1
RPE_3607	SSF46906	Ribosomal protein L11, C-terminal domain
RPE_3607	SSF54747	Ribosomal L11/L12e N-terminal domain
RPE_3608	SSF50104	Translation proteins SH3-like domain
RPE_3608	SSF82679	N-utilization substance G protein NusG, N-terminal domain
RPE_3610	SSF50199	Staphylococcal nuclease
RPE_3610	SSF50685	Barwin-like endoglucanases
RPE_3611	SSF103190	Sensory domain-like
RPE_3611	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_3612	SSF50447	Translation proteins
RPE_3612	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
RPE_3612	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3613	SSF56601	beta-lactamase/transpeptidase-like
RPE_3614	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3615	SSF53254	Phosphoglycerate mutase-like
RPE_3616	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3618	SSF56112	Protein kinase-like (PK-like)
RPE_3619	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_3619	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_3620	SSF46689	Homeodomain-like
RPE_3620	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_3623	SSF53474	alpha/beta-Hydrolases
RPE_3624	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPE_3627	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_3627	SSF52172	CheY-like
RPE_3627	SSF55785	PYP-like sensor domain (PAS domain)
RPE_3627	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_3628	SSF103039	CheC-like
RPE_3629	SSF52172	CheY-like
RPE_3631	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RPE_3631	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_3631	SSF50341	CheW-like
RPE_3631	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_3632	SSF52172	CheY-like
RPE_3633	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
RPE_3633	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_3634	SSF48371	ARM repeat
RPE_3635	SSF52172	CheY-like
RPE_3635	SSF52738	Methylesterase CheB, C-terminal domain
RPE_3636	SSF50341	CheW-like
RPE_3637	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_3638	SSF103039	CheC-like
RPE_3641	SSF53474	alpha/beta-Hydrolases
RPE_3643	SSF51905	FAD/NAD(P)-binding domain
RPE_3644	SSF51445	(Trans)glycosidases
RPE_3645	SSF47240	Ferritin-like
RPE_3647	SSF56219	DNase I-like
RPE_3648	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3649	SSF50129	GroES-like
RPE_3649	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3650	SSF50692	ADC-like
RPE_3650	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
RPE_3652	SSF48208	Six-hairpin glycosidases
RPE_3652	SSF74650	Galactose mutarotase-like
RPE_3655	SSF46785	"Winged helix" DNA-binding domain
RPE_3655	SSF51206	cAMP-binding domain-like
RPE_3658	SSF52833	Thioredoxin-like
RPE_3659	SSF52788	Phosphotyrosine protein phosphatases I
RPE_3660	SSF46785	"Winged helix" DNA-binding domain
RPE_3661	SSF52833	Thioredoxin-like
RPE_3663	SSF46785	"Winged helix" DNA-binding domain
RPE_3664	SSF47240	Ferritin-like
RPE_3666	SSF54001	Cysteine proteinases
RPE_3672	SSF49503	Cupredoxins
RPE_3674	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3675	SSF46689	Homeodomain-like
RPE_3675	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_3676	SSF53474	alpha/beta-Hydrolases
RPE_3677	SSF51182	RmlC-like cupins
RPE_3678	SSF51649	RuBisCo, C-terminal domain
RPE_3678	SSF54966	RuBisCO, large subunit, small (N-terminal) domain
RPE_3679	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3680	SSF50037	C-terminal domain of transcriptional repressors
RPE_3682	SSF55315	L30e-like
RPE_3682	SSF75217	alpha/beta knot
RPE_3683	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3684	SSF161098	MetI-like
RPE_3685	SSF160964	MalF N-terminal region-like
RPE_3685	SSF161098	MetI-like
RPE_3687	SSF50331	MOP-like
RPE_3687	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3688	SSF143975	IlvD/EDD N-terminal domain-like
RPE_3688	SSF52016	LeuD/IlvD-like
RPE_3689	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3690	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3692	SSF53720	ALDH-like
RPE_3692	SSF56796	Dehydroquinate synthase-like
RPE_3695	SSF141868	EAL domain-like
RPE_3695	SSF158472	HAMP domain-like
RPE_3695	SSF55073	Nucleotide cyclase
RPE_3697	SSF46689	Homeodomain-like
RPE_3701	SSF82771	GIY-YIG endonuclease
RPE_3703	SSF52833	Thioredoxin-like
RPE_3704	SSF75304	Amidase signature (AS) enzymes
RPE_3706	SSF53474	alpha/beta-Hydrolases
RPE_3707	SSF75169	DsrEFH-like
RPE_3708	SSF51569	Aldolase
RPE_3708	SSF53697	SIS domain
RPE_3709	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_3709	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3710	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3710	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPE_3711	SSF100950	NagB/RpiA/CoA transferase-like
RPE_3712	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3713	SSF56784	HAD-like
RPE_3714	SSF48208	Six-hairpin glycosidases
RPE_3715	SSF51445	(Trans)glycosidases
RPE_3716	SSF51445	(Trans)glycosidases
RPE_3717	SSF51011	Glycosyl hydrolase domain
RPE_3717	SSF51445	(Trans)glycosidases
RPE_3717	SSF56112	Protein kinase-like (PK-like)
RPE_3718	SSF51011	Glycosyl hydrolase domain
RPE_3718	SSF51445	(Trans)glycosidases
RPE_3718	SSF81296	E set domains
RPE_3719	SSF51011	Glycosyl hydrolase domain
RPE_3719	SSF51445	(Trans)glycosidases
RPE_3719	SSF81296	E set domains
RPE_3720	SSF82544	GckA/TtuD-like
RPE_3721	SSF51445	(Trans)glycosidases
RPE_3724	SSF50249	Nucleic acid-binding proteins
RPE_3724	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
RPE_3725	SSF100939	SPOC domain-like
RPE_3727	SSF64307	SirA-like
RPE_3728	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_3730	SSF69287	Urease metallochaperone UreE, N-terminal domain
RPE_3730	SSF69737	Urease metallochaperone UreE, C-terminal domain
RPE_3731	SSF54909	Dimeric alpha+beta barrel
RPE_3732	SSF51338	Composite domain of metallo-dependent hydrolases
RPE_3732	SSF51556	Metallo-dependent hydrolases
RPE_3733	SSF109604	HD-domain/PDEase-like
RPE_3734	SSF51278	Urease, beta-subunit
RPE_3735	SSF54111	Urease, gamma-subunit
RPE_3737	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3738	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3741	SSF53822	Periplasmic binding protein-like I
RPE_3742	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3743	SSF50249	Nucleic acid-binding proteins
RPE_3744	SSF50249	Nucleic acid-binding proteins
RPE_3753	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3754	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3757	SSF48452	TPR-like
RPE_3758	SSF53187	Zn-dependent exopeptidases
RPE_3759	SSF50044	SH3-domain
RPE_3759	SSF54001	Cysteine proteinases
RPE_3760	SSF55811	Nudix
RPE_3761	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3762	SSF88723	PIN domain-like
RPE_3764	SSF161098	MetI-like
RPE_3765	SSF161098	MetI-like
RPE_3766	SSF53850	Periplasmic binding protein-like II
RPE_3767	SSF53850	Periplasmic binding protein-like II
RPE_3768	SSF46626	Cytochrome c
RPE_3769	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_3770	SSF53850	Periplasmic binding protein-like II
RPE_3770	SSF55021	ACT-like
RPE_3771	SSF51679	Bacterial luciferase-like
RPE_3772	SSF51730	FAD-linked oxidoreductase
RPE_3773	SSF47644	Methionine synthase domain
RPE_3773	SSF51717	Dihydropteroate synthetase-like
RPE_3773	SSF52242	Cobalamin (vitamin B12)-binding domain
RPE_3773	SSF56507	Methionine synthase activation domain-like
RPE_3773	SSF82282	Homocysteine S-methyltransferase
RPE_3774	SSF53067	Actin-like ATPase domain
RPE_3775	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_3775	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_3776	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_3776	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_3778	SSF53901	Thiolase-like
RPE_3779	SSF56801	Acetyl-CoA synthetase-like
RPE_3780	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_3780	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3780	SSF52096	ClpP/crotonase
RPE_3781	SSF46785	"Winged helix" DNA-binding domain
RPE_3781	SSF55781	GAF domain-like
RPE_3782	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3783	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3786	SSF53822	Periplasmic binding protein-like I
RPE_3787	SSF53822	Periplasmic binding protein-like I
RPE_3788	SSF53822	Periplasmic binding protein-like I
RPE_3789	SSF53822	Periplasmic binding protein-like I
RPE_3791	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3792	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_3793	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3794	SSF46785	"Winged helix" DNA-binding domain
RPE_3796	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3797	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3798	SSF55785	PYP-like sensor domain (PAS domain)
RPE_3799	SSF55073	Nucleotide cyclase
RPE_3800	SSF53822	Periplasmic binding protein-like I
RPE_3801	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_3802	SSF56801	Acetyl-CoA synthetase-like
RPE_3803	SSF52096	ClpP/crotonase
RPE_3808	SSF51905	FAD/NAD(P)-binding domain
RPE_3808	SSF54373	FAD-linked reductases, C-terminal domain
RPE_3810	SSF46785	"Winged helix" DNA-binding domain
RPE_3810	SSF53850	Periplasmic binding protein-like II
RPE_3811	SSF50475	FMN-binding split barrel
RPE_3819	SSF51206	cAMP-binding domain-like
RPE_3820	SSF52096	ClpP/crotonase
RPE_3821	SSF55469	FMN-dependent nitroreductase-like
RPE_3822	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_3822	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_3823	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_3823	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_3824	SSF56801	Acetyl-CoA synthetase-like
RPE_3825	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3826	SSF46689	Homeodomain-like
RPE_3826	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_3827	SSF53901	Thiolase-like
RPE_3828	SSF56801	Acetyl-CoA synthetase-like
RPE_3829	SSF53041	Resolvase-like
RPE_3830	SSF103515	Autotransporter
RPE_3830	SSF52266	SGNH hydrolase
RPE_3831	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_3833	SSF46785	"Winged helix" DNA-binding domain
RPE_3833	SSF53850	Periplasmic binding protein-like II
RPE_3834	SSF142433	CinA-like
RPE_3837	SSF46689	Homeodomain-like
RPE_3837	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_3840	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
RPE_3840	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
RPE_3841	SSF103473	MFS general substrate transporter
RPE_3842	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_3845	SSF52733	Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
RPE_3846	SSF47729	IHF-like DNA-binding proteins
RPE_3847	SSF53254	Phosphoglycerate mutase-like
RPE_3849	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3850	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3851	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3854	SSF53822	Periplasmic binding protein-like I
RPE_3855	SSF54197	HIT-like
RPE_3856	SSF56935	Porins
RPE_3857	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3858	SSF161098	MetI-like
RPE_3859	SSF53850	Periplasmic binding protein-like II
RPE_3860	SSF53920	Fe-only hydrogenase
RPE_3860	SSF54292	2Fe-2S ferredoxin-like
RPE_3860	SSF54862	4Fe-4S ferredoxins
RPE_3861	SSF140490	Nqo1C-terminal domain-like
RPE_3861	SSF46548	alpha-helical ferredoxin
RPE_3861	SSF51971	Nucleotide-binding domain
RPE_3862	SSF53067	Actin-like ATPase domain
RPE_3863	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3863	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPE_3863	SSF75138	HprK N-terminal domain-like
RPE_3865	SSF49503	Cupredoxins
RPE_3866	SSF81442	Cytochrome c oxidase subunit I-like
RPE_3876	SSF56784	HAD-like
RPE_3876	SSF81653	Calcium ATPase, transduction domain A
RPE_3878	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3879	SSF110857	Gamma-glutamyl cyclotransferase-like
RPE_3881	SSF53807	"Helical backbone" metal receptor
RPE_3883	SSF53807	"Helical backbone" metal receptor
RPE_3884	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3885	SSF46689	Homeodomain-like
RPE_3885	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3885	SSF55781	GAF domain-like
RPE_3886	SSF50475	FMN-binding split barrel
RPE_3887	SSF46785	"Winged helix" DNA-binding domain
RPE_3887	SSF53383	PLP-dependent transferases
RPE_3889	SSF53850	Periplasmic binding protein-like II
RPE_3890	SSF161098	MetI-like
RPE_3891	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3892	SSF53633	Carbamate kinase-like
RPE_3893	SSF53633	Carbamate kinase-like
RPE_3894	SSF81342	Transmembrane di-heme cytochromes
RPE_3898	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
RPE_3898	SSF63380	Riboflavin synthase domain-like
RPE_3903	SSF69047	Hypothetical protein YjbJ
RPE_3904	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_3905	SSF53720	ALDH-like
RPE_3905	SSF56801	Acetyl-CoA synthetase-like
RPE_3907	SSF56801	Acetyl-CoA synthetase-like
RPE_3908	SSF56801	Acetyl-CoA synthetase-like
RPE_3909	SSF103473	MFS general substrate transporter
RPE_3910	SSF52091	SpoIIaa-like
RPE_3911	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_3912	SSF53850	Periplasmic binding protein-like II
RPE_3913	SSF158472	HAMP domain-like
RPE_3913	SSF81606	PP2C-like
RPE_3914	SSF53720	ALDH-like
RPE_3915	SSF51905	FAD/NAD(P)-binding domain
RPE_3915	SSF54373	FAD-linked reductases, C-terminal domain
RPE_3916	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3918	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_3919	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_3919	SSF52172	CheY-like
RPE_3920	SSF53850	Periplasmic binding protein-like II
RPE_3921	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RPE_3921	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_3921	SSF52172	CheY-like
RPE_3921	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_3922	SSF141868	EAL domain-like
RPE_3922	SSF52172	CheY-like
RPE_3924	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
RPE_3924	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_3925	SSF50341	CheW-like
RPE_3926	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RPE_3926	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_3926	SSF50341	CheW-like
RPE_3926	SSF52172	CheY-like
RPE_3926	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_3928	SSF158472	HAMP domain-like
RPE_3928	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_3929	SSF158472	HAMP domain-like
RPE_3929	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_3930	SSF52172	CheY-like
RPE_3932	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_3932	SSF56112	Protein kinase-like (PK-like)
RPE_3933	SSF56300	Metallo-dependent phosphatases
RPE_3935	SSF102114	Radical SAM enzymes
RPE_3935	SSF52242	Cobalamin (vitamin B12)-binding domain
RPE_3936	SSF111126	Ligand-binding domain in the NO signalling and Golgi transport
RPE_3937	SSF102114	Radical SAM enzymes
RPE_3941	SSF47240	Ferritin-like
RPE_3941	SSF56784	HAD-like
RPE_3941	SSF81653	Calcium ATPase, transduction domain A
RPE_3941	SSF81665	Calcium ATPase, transmembrane domain M
RPE_3943	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RPE_3944	SSF55073	Nucleotide cyclase
RPE_3945	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
RPE_3946	SSF53137	Translational machinery components
RPE_3949	SSF143120	YefM-like
RPE_3950	SSF46689	Homeodomain-like
RPE_3952	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3954	SSF111369	HlyD-like secretion proteins
RPE_3955	SSF53474	alpha/beta-Hydrolases
RPE_3958	SSF51316	Mss4-like
RPE_3959	SSF55068	Peptide methionine sulfoxide reductase
RPE_3960	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
RPE_3960	SSF52335	Methylglyoxal synthase-like
RPE_3960	SSF52440	PreATP-grasp domain
RPE_3960	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_3961	SSF46557	GreA transcript cleavage protein, N-terminal domain
RPE_3961	SSF54534	FKBP-like
RPE_3963	SSF46785	"Winged helix" DNA-binding domain
RPE_3963	SSF54909	Dimeric alpha+beta barrel
RPE_3964	SSF51905	FAD/NAD(P)-binding domain
RPE_3965	SSF46785	"Winged helix" DNA-binding domain
RPE_3965	SSF53850	Periplasmic binding protein-like II
RPE_3966	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3972	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_3972	SSF90123	ABC transporter transmembrane region
RPE_3974	SSF47175	Cytochromes
RPE_3975	SSF53146	Nitrogenase accessory factor-like
RPE_3976	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_3977	SSF50022	ISP domain
RPE_3978	SSF46785	"Winged helix" DNA-binding domain
RPE_3979	SSF46785	"Winged helix" DNA-binding domain
RPE_3979	SSF53850	Periplasmic binding protein-like II
RPE_3980	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_3981	SSF52833	Thioredoxin-like
RPE_3983	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_3985	SSF51905	FAD/NAD(P)-binding domain
RPE_3986	SSF51905	FAD/NAD(P)-binding domain
RPE_3987	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPE_3987	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPE_3987	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_3988	SSF111369	HlyD-like secretion proteins
RPE_3989	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_3989	SSF52172	CheY-like
RPE_3990	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_3990	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_3991	SSF52151	FabD/lysophospholipase-like
RPE_3993	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_3993	SSF52172	CheY-like
RPE_3994	SSF56349	DNA breaking-rejoining enzymes
RPE_4000	SSF50494	Trypsin-like serine proteases
RPE_4003	SSF56112	Protein kinase-like (PK-like)
RPE_4017	SSF54427	NTF2-like
RPE_4021	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4024	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4026	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4029	SSF53955	Lysozyme-like
RPE_4030	SSF51306	LexA/Signal peptidase
RPE_4033	SSF46955	Putative DNA-binding domain
RPE_4037	SSF47413	lambda repressor-like DNA-binding domains
RPE_4042	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4042	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_4043	SSF109709	KorB DNA-binding domain-like
RPE_4043	SSF110849	ParB/Sulfiredoxin
RPE_4045	SSF47729	IHF-like DNA-binding proteins
RPE_4047	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4049	SSF52980	Restriction endonuclease-like
RPE_4056	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4057	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4063	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_4063	SSF55785	PYP-like sensor domain (PAS domain)
RPE_4063	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_4065	SSF88723	PIN domain-like
RPE_4068	SSF46785	"Winged helix" DNA-binding domain
RPE_4068	SSF51206	cAMP-binding domain-like
RPE_4069	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_4070	SSF140683	SP0561-like
RPE_4071	SSF49503	Cupredoxins
RPE_4072	SSF56436	C-type lectin-like
RPE_4073	SSF53850	Periplasmic binding protein-like II
RPE_4074	SSF161098	MetI-like
RPE_4075	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_4075	SSF52172	CheY-like
RPE_4075	SSF55785	PYP-like sensor domain (PAS domain)
RPE_4075	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_4077	SSF100950	NagB/RpiA/CoA transferase-like
RPE_4078	SSF100950	NagB/RpiA/CoA transferase-like
RPE_4081	SSF161098	MetI-like
RPE_4082	SSF161098	MetI-like
RPE_4083	SSF50331	MOP-like
RPE_4083	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4084	SSF141868	EAL domain-like
RPE_4084	SSF55073	Nucleotide cyclase
RPE_4084	SSF55785	PYP-like sensor domain (PAS domain)
RPE_4085	SSF51905	FAD/NAD(P)-binding domain
RPE_4088	SSF55073	Nucleotide cyclase
RPE_4089	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
RPE_4090	SSF51246	Rudiment single hybrid motif
RPE_4090	SSF52440	PreATP-grasp domain
RPE_4090	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_4092	SSF141371	PilZ domain-like
RPE_4096	SSF52467	DHS-like NAD/FAD-binding domain
RPE_4098	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_4098	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RPE_4099	SSF81469	Bacterial aa3 type cytochrome c oxidase subunit IV
RPE_4100	SSF140931	Fic-like
RPE_4101	SSF89447	AbrB/MazE/MraZ-like
RPE_4102	SSF55486	Metalloproteases ("zincins"), catalytic domain
RPE_4104	SSF46689	Homeodomain-like
RPE_4104	SSF52172	CheY-like
RPE_4104	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4105	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_4105	SSF47090	PGBD-like
RPE_4106	SSF55166	Hedgehog/DD-peptidase
RPE_4108	SSF158757	SMc04008-like
RPE_4110	SSF50800	PK beta-barrel domain-like
RPE_4110	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPE_4110	SSF52935	PK C-terminal domain-like
RPE_4111	SSF143100	TTHA1013/TTHA0281-like
RPE_4112	SSF82784	OsmC-like
RPE_4113	SSF53474	alpha/beta-Hydrolases
RPE_4114	SSF48452	TPR-like
RPE_4115	SSF57840	Ribosomal protein L36
RPE_4117	SSF53850	Periplasmic binding protein-like II
RPE_4118	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_4119	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_4120	SSF46785	"Winged helix" DNA-binding domain
RPE_4120	SSF55781	GAF domain-like
RPE_4121	SSF51556	Metallo-dependent hydrolases
RPE_4122	SSF55826	YbaK/ProRS associated domain
RPE_4126	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_4126	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_4127	SSF52096	ClpP/crotonase
RPE_4128	SSF53098	Ribonuclease H-like
RPE_4129	SSF56112	Protein kinase-like (PK-like)
RPE_4136	SSF143120	YefM-like
RPE_4137	SSF88723	PIN domain-like
RPE_4141	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4143	SSF47413	lambda repressor-like DNA-binding domains
RPE_4144	SSF48695	Multiheme cytochromes
RPE_4145	SSF46626	Cytochrome c
RPE_4146	SSF141868	EAL domain-like
RPE_4146	SSF55073	Nucleotide cyclase
RPE_4146	SSF55785	PYP-like sensor domain (PAS domain)
RPE_4147	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_4148	SSF53271	PRTase-like
RPE_4149	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
RPE_4149	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
RPE_4149	SSF54680	Pyrimidine nucleoside phosphorylase C-terminal domain
RPE_4151	SSF51430	NAD(P)-linked oxidoreductase
RPE_4152	SSF55826	YbaK/ProRS associated domain
RPE_4153	SSF103481	Multidrug resistance efflux transporter EmrE
RPE_4154	SSF55785	PYP-like sensor domain (PAS domain)
RPE_4154	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_4155	SSF158472	HAMP domain-like
RPE_4155	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_4156	SSF47240	Ferritin-like
RPE_4158	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_4159	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_4160	SSF143548	Serine metabolism enzymes domain
RPE_4160	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_4160	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RPE_4160	SSF55021	ACT-like
RPE_4161	SSF53383	PLP-dependent transferases
RPE_4163	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_4164	SSF47616	GST C-terminal domain-like
RPE_4164	SSF52833	Thioredoxin-like
RPE_4165	SSF56925	OMPA-like
RPE_4166	SSF56925	OMPA-like
RPE_4167	SSF103473	MFS general substrate transporter
RPE_4168	SSF53738	Phosphoglucomutase, first 3 domains
RPE_4168	SSF55957	Phosphoglucomutase, C-terminal domain
RPE_4170	SSF51395	FMN-linked oxidoreductases
RPE_4171	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_4171	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RPE_4172	SSF47413	lambda repressor-like DNA-binding domains
RPE_4173	SSF50447	Translation proteins
RPE_4173	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4173	SSF54211	Ribosomal protein S5 domain 2-like
RPE_4173	SSF54980	EF-G C-terminal domain-like
RPE_4176	SSF53383	PLP-dependent transferases
RPE_4177	SSF47616	GST C-terminal domain-like
RPE_4177	SSF52833	Thioredoxin-like
RPE_4178	SSF50952	Soluble quinoprotein glucose dehydrogenase
RPE_4179	SSF103481	Multidrug resistance efflux transporter EmrE
RPE_4180	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
RPE_4181	SSF51430	NAD(P)-linked oxidoreductase
RPE_4185	SSF56784	HAD-like
RPE_4186	SSF47616	GST C-terminal domain-like
RPE_4186	SSF52833	Thioredoxin-like
RPE_4187	SSF47616	GST C-terminal domain-like
RPE_4187	SSF52833	Thioredoxin-like
RPE_4188	SSF47473	EF-hand
RPE_4189	SSF55718	SCP-like
RPE_4189	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_4191	SSF46600	C-terminal UvrC-binding domain of UvrB
RPE_4191	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4195	SSF47413	lambda repressor-like DNA-binding domains
RPE_4196	SSF143100	TTHA1013/TTHA0281-like
RPE_4197	SSF54786	YcfA/nrd intein domain
RPE_4198	SSF53901	Thiolase-like
RPE_4199	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_4202	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_4203	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_4203	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RPE_4204	SSF55973	S-adenosylmethionine synthetase
RPE_4205	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_4206	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_4206	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_4206	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
RPE_4207	SSF48452	TPR-like
RPE_4207	SSF52129	Caspase-like
RPE_4209	SSF51726	UROD/MetE-like
RPE_4210	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4211	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4215	SSF53822	Periplasmic binding protein-like I
RPE_4218	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_4219	SSF53328	Formyltransferase
RPE_4219	SSF55021	ACT-like
RPE_4220	SSF69618	HemD-like
RPE_4221	SSF53822	Periplasmic binding protein-like I
RPE_4224	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4225	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4226	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4227	SSF56801	Acetyl-CoA synthetase-like
RPE_4228	SSF52980	Restriction endonuclease-like
RPE_4231	SSF53822	Periplasmic binding protein-like I
RPE_4232	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4233	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_4234	SSF53720	ALDH-like
RPE_4235	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_4236	SSF51269	AFP III-like domain
RPE_4236	SSF51569	Aldolase
RPE_4237	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_4238	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_4238	SSF52922	TK C-terminal domain-like
RPE_4239	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_4240	SSF56784	HAD-like
RPE_4241	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_4242	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_4243	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_4246	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_4247	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_4247	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_4248	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4250	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_4251	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_4252	SSF53383	PLP-dependent transferases
RPE_4253	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_4254	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_4255	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_4256	SSF51182	RmlC-like cupins
RPE_4257	SSF51161	Trimeric LpxA-like enzymes
RPE_4260	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_4261	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_4263	SSF103473	MFS general substrate transporter
RPE_4267	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_4267	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_4269	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4270	SSF52172	CheY-like
RPE_4271	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_4272	SSF51182	RmlC-like cupins
RPE_4272	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_4275	SSF54001	Cysteine proteinases
RPE_4276	SSF55785	PYP-like sensor domain (PAS domain)
RPE_4276	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_4278	SSF53738	Phosphoglucomutase, first 3 domains
RPE_4278	SSF55957	Phosphoglucomutase, C-terminal domain
RPE_4279	SSF48208	Six-hairpin glycosidases
RPE_4280	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
RPE_4280	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_4281	SSF52172	CheY-like
RPE_4281	SSF52738	Methylesterase CheB, C-terminal domain
RPE_4282	SSF52172	CheY-like
RPE_4283	SSF50341	CheW-like
RPE_4284	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RPE_4284	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_4284	SSF50341	CheW-like
RPE_4284	SSF52172	CheY-like
RPE_4284	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_4286	SSF56655	Carbohydrate phosphatase
RPE_4290	SSF46785	"Winged helix" DNA-binding domain
RPE_4291	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4296	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_4300	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_4301	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_4305	SSF52467	DHS-like NAD/FAD-binding domain
RPE_4305	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_4306	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_4307	SSF89796	CoA-transferase family III (CaiB/BaiF)
RPE_4308	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_4308	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_4309	SSF48264	Cytochrome P450
RPE_4310	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_4310	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_4311	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_4314	SSF90123	ABC transporter transmembrane region
RPE_4315	SSF50249	Nucleic acid-binding proteins
RPE_4317	SSF51730	FAD-linked oxidoreductase
RPE_4317	SSF53720	ALDH-like
RPE_4317	SSF81935	N-terminal domain of bifunctional PutA protein
RPE_4318	SSF89796	CoA-transferase family III (CaiB/BaiF)
RPE_4322	SSF140478	LemA-like
RPE_4323	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
RPE_4323	SSF56003	Molybdenum cofactor-binding domain
RPE_4324	SSF56801	Acetyl-CoA synthetase-like
RPE_4326	SSF56529	FAH
RPE_4327	SSF47616	GST C-terminal domain-like
RPE_4327	SSF52833	Thioredoxin-like
RPE_4328	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
RPE_4328	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
RPE_4329	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_4330	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_4333	SSF48113	Heme-dependent peroxidases
RPE_4335	SSF51261	Duplicated hybrid motif
RPE_4336	SSF101898	NHL repeat
RPE_4336	SSF63829	Calcium-dependent phosphotriesterase
RPE_4337	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4337	SSF81923	Double Clp-N motif
RPE_4338	SSF54001	Cysteine proteinases
RPE_4339	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_4340	SSF53474	alpha/beta-Hydrolases
RPE_4341	SSF48600	Chorismate mutase II
RPE_4342	SSF53383	PLP-dependent transferases
RPE_4343	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_4343	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_4345	SSF46689	Homeodomain-like
RPE_4345	SSF51182	RmlC-like cupins
RPE_4346	SSF51182	RmlC-like cupins
RPE_4348	SSF143100	TTHA1013/TTHA0281-like
RPE_4349	SSF143865	CorA soluble domain-like
RPE_4349	SSF144083	Magnesium transport protein CorA, transmembrane region
RPE_4350	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_4352	SSF56801	Acetyl-CoA synthetase-like
RPE_4353	SSF52980	Restriction endonuclease-like
RPE_4355	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_4356	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_4356	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_4357	SSF142695	RibA-like
RPE_4357	SSF55821	YrdC/RibB
RPE_4358	SSF69118	AhpD-like
RPE_4360	SSF46785	"Winged helix" DNA-binding domain
RPE_4360	SSF51206	cAMP-binding domain-like
RPE_4361	SSF50156	PDZ domain-like
RPE_4361	SSF50494	Trypsin-like serine proteases
RPE_4362	SSF47413	lambda repressor-like DNA-binding domains
RPE_4363	SSF143975	IlvD/EDD N-terminal domain-like
RPE_4363	SSF52016	LeuD/IlvD-like
RPE_4365	SSF46785	"Winged helix" DNA-binding domain
RPE_4366	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
RPE_4366	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
RPE_4369	SSF52833	Thioredoxin-like
RPE_4372	SSF103088	OmpA-like
RPE_4374	SSF160104	Acetoacetate decarboxylase-like
RPE_4374	SSF51905	FAD/NAD(P)-binding domain
RPE_4375	SSF51905	FAD/NAD(P)-binding domain
RPE_4376	SSF48452	TPR-like
RPE_4376	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4376	SSF55073	Nucleotide cyclase
RPE_4380	SSF55821	YrdC/RibB
RPE_4381	SSF55103	FAD-linked oxidases, C-terminal domain
RPE_4381	SSF56176	FAD-binding/transporter-associated domain-like
RPE_4382	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4383	SSF143081	BB1717-like
RPE_4385	SSF55811	Nudix
RPE_4389	SSF51338	Composite domain of metallo-dependent hydrolases
RPE_4389	SSF51556	Metallo-dependent hydrolases
RPE_4390	SSF103025	Folate-binding domain
RPE_4391	SSF48150	DNA-glycosylase
RPE_4393	SSF109604	HD-domain/PDEase-like
RPE_4394	SSF52799	(Phosphotyrosine protein) phosphatases II
RPE_4395	SSF46785	"Winged helix" DNA-binding domain
RPE_4395	SSF55811	Nudix
RPE_4397	SSF55073	Nucleotide cyclase
RPE_4399	SSF50129	GroES-like
RPE_4399	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_4400	SSF142754	NadA-like
RPE_4401	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
RPE_4401	SSF51905	FAD/NAD(P)-binding domain
RPE_4401	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
RPE_4402	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
RPE_4402	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
RPE_4405	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPE_4405	SSF52009	Phosphohistidine domain
RPE_4405	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_4409	SSF109604	HD-domain/PDEase-like
RPE_4410	SSF52980	Restriction endonuclease-like
RPE_4411	SSF55681	Class II aaRS and biotin synthetases
RPE_4413	SSF52096	ClpP/crotonase
RPE_4414	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_4415	SSF54913	GlnB-like
RPE_4416	SSF48576	Terpenoid synthases
RPE_4419	SSF54211	Ribosomal protein S5 domain 2-like
RPE_4419	SSF55060	GHMP Kinase, C-terminal domain
RPE_4420	SSF48452	TPR-like
RPE_4421	SSF51905	FAD/NAD(P)-binding domain
RPE_4421	SSF54373	FAD-linked reductases, C-terminal domain
RPE_4421	SSF54862	4Fe-4S ferredoxins
RPE_4422	SSF52141	Uracil-DNA glycosylase-like
RPE_4424	SSF53098	Ribonuclease H-like
RPE_4425	SSF102114	Radical SAM enzymes
RPE_4426	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_4427	SSF46785	"Winged helix" DNA-binding domain
RPE_4427	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_4429	SSF53218	Molybdenum cofactor biosynthesis proteins
RPE_4431	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_4433	SSF48150	DNA-glycosylase
RPE_4433	SSF55811	Nudix
RPE_4434	SSF47413	lambda repressor-like DNA-binding domains
RPE_4436	SSF52833	Thioredoxin-like
RPE_4437	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4438	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4441	SSF140478	LemA-like
RPE_4442	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_4443	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4443	SSF75553	Smc hinge domain
RPE_4447	SSF52317	Class I glutamine amidotransferase-like
RPE_4447	SSF56322	ADC synthase
RPE_4449	SSF103084	Holliday junction resolvase RusA
RPE_4450	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_4451	SSF56112	Protein kinase-like (PK-like)
RPE_4453	SSF82057	Prokaryotic SH3-related domain
RPE_4455	SSF56801	Acetyl-CoA synthetase-like
RPE_4456	SSF48452	TPR-like
RPE_4457	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_4458	SSF46626	Cytochrome c
RPE_4459	SSF102114	Radical SAM enzymes
RPE_4462	SSF53850	Periplasmic binding protein-like II
RPE_4463	SSF53850	Periplasmic binding protein-like II
RPE_4464	SSF54001	Cysteine proteinases
RPE_4465	SSF141868	EAL domain-like
RPE_4465	SSF52172	CheY-like
RPE_4468	SSF48239	Terpenoid cyclases/Protein prenyltransferases
RPE_4471	SSF55811	Nudix
RPE_4472	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_4473	SSF47413	lambda repressor-like DNA-binding domains
RPE_4477	SSF47413	lambda repressor-like DNA-binding domains
RPE_4479	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RPE_4480	SSF52972	ITPase-like
RPE_4481	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4482	SSF52788	Phosphotyrosine protein phosphatases I
RPE_4484	SSF53720	ALDH-like
RPE_4486	SSF46689	Homeodomain-like
RPE_4486	SSF53098	Ribonuclease H-like
RPE_4488	SSF55205	EPT/RTPC-like
RPE_4489	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_4490	SSF53474	alpha/beta-Hydrolases
RPE_4492	SSF53474	alpha/beta-Hydrolases
RPE_4493	SSF54909	Dimeric alpha+beta barrel
RPE_4494	SSF51206	cAMP-binding domain-like
RPE_4494	SSF51905	FAD/NAD(P)-binding domain
RPE_4495	SSF54427	NTF2-like
RPE_4496	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_4497	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_4499	SSF64518	Phase 1 flagellin
RPE_4500	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4501	SSF54913	GlnB-like
RPE_4503	SSF101478	ADP-ribosylglycohydrolase
RPE_4503	SSF52799	(Phosphotyrosine protein) phosphatases II
RPE_4506	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_4507	SSF103481	Multidrug resistance efflux transporter EmrE
RPE_4508	SSF143865	CorA soluble domain-like
RPE_4508	SSF144083	Magnesium transport protein CorA, transmembrane region
RPE_4509	SSF55811	Nudix
RPE_4512	SSF50331	MOP-like
RPE_4513	SSF52833	Thioredoxin-like
RPE_4514	SSF69118	AhpD-like
RPE_4515	SSF54862	4Fe-4S ferredoxins
RPE_4516	SSF51905	FAD/NAD(P)-binding domain
RPE_4516	SSF54373	FAD-linked reductases, C-terminal domain
RPE_4517	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_4517	SSF52467	DHS-like NAD/FAD-binding domain
RPE_4518	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_4520	SSF51569	Aldolase
RPE_4521	SSF53383	PLP-dependent transferases
RPE_4522	SSF117916	Fe-S cluster assembly (FSCA) domain-like
RPE_4522	SSF82649	SufE/NifU
RPE_4523	SSF89360	HesB-like domain
RPE_4525	SSF46548	alpha-helical ferredoxin
RPE_4528	SSF53146	Nitrogenase accessory factor-like
RPE_4529	SSF53807	"Helical backbone" metal receptor
RPE_4530	SSF53807	"Helical backbone" metal receptor
RPE_4531	SSF53807	"Helical backbone" metal receptor
RPE_4532	SSF53807	"Helical backbone" metal receptor
RPE_4533	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4535	SSF159203	NifT/FixU-like
RPE_4538	SSF48452	TPR-like
RPE_4539	SSF89360	HesB-like domain
RPE_4540	SSF54862	4Fe-4S ferredoxins
RPE_4541	SSF102114	Radical SAM enzymes
RPE_4541	SSF53146	Nitrogenase accessory factor-like
RPE_4542	SSF54862	4Fe-4S ferredoxins
RPE_4543	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4543	SSF55781	GAF domain-like
RPE_4544	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_4546	SSF56801	Acetyl-CoA synthetase-like
RPE_4547	SSF56918	Light-harvesting complex subunits
RPE_4548	SSF56918	Light-harvesting complex subunits
RPE_4549	SSF103190	Sensory domain-like
RPE_4549	SSF55073	Nucleotide cyclase
RPE_4551	SSF103473	MFS general substrate transporter
RPE_4552	SSF56784	HAD-like
RPE_4553	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_4554	SSF51126	Pectin lyase-like
RPE_4556	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_4556	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_4557	SSF74653	TolA/TonB C-terminal domain
RPE_4558	SSF46785	"Winged helix" DNA-binding domain
RPE_4559	SSF81342	Transmembrane di-heme cytochromes
RPE_4560	SSF47473	EF-hand
RPE_4561	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_4561	SSF52172	CheY-like
RPE_4562	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_4562	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_4563	SSF103481	Multidrug resistance efflux transporter EmrE
RPE_4567	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_4568	SSF47741	CO dehydrogenase ISP C-domain like
RPE_4568	SSF54292	2Fe-2S ferredoxin-like
RPE_4569	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
RPE_4569	SSF56003	Molybdenum cofactor-binding domain
RPE_4570	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
RPE_4570	SSF56176	FAD-binding/transporter-associated domain-like
RPE_4571	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_4576	SSF143631	ApbE-like
RPE_4578	SSF56935	Porins
RPE_4581	SSF74653	TolA/TonB C-terminal domain
RPE_4582	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4582	SSF81767	Pre-protein crosslinking domain of SecA
RPE_4582	SSF81886	Helical scaffold and wing domains of SecA
RPE_4584	SSF50182	Sm-like ribonucleoproteins
RPE_4586	SSF56801	Acetyl-CoA synthetase-like
RPE_4589	SSF103263	Chorismate synthase, AroC
RPE_4590	SSF53254	Phosphoglycerate mutase-like
RPE_4591	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_4592	SSF46565	Chaperone J-domain
RPE_4592	SSF49493	HSP40/DnaJ peptide-binding domain
RPE_4594	SSF50475	FMN-binding split barrel
RPE_4595	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_4597	SSF141130	Acetamidase/Formamidase-like
RPE_4598	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4599	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4602	SSF53822	Periplasmic binding protein-like I
RPE_4603	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_4603	SSF52172	CheY-like
RPE_4603	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_4604	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_4604	SSF52172	CheY-like
RPE_4608	SSF58113	Apolipoprotein A-I
RPE_4609	SSF56801	Acetyl-CoA synthetase-like
RPE_4611	SSF46785	"Winged helix" DNA-binding domain
RPE_4611	SSF51206	cAMP-binding domain-like
RPE_4612	SSF51246	Rudiment single hybrid motif
RPE_4612	SSF52440	PreATP-grasp domain
RPE_4612	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_4613	SSF55961	Bet v1-like
RPE_4614	SSF46785	"Winged helix" DNA-binding domain
RPE_4616	SSF53474	alpha/beta-Hydrolases
RPE_4618	SSF53067	Actin-like ATPase domain
RPE_4619	SSF51445	(Trans)glycosidases
RPE_4620	SSF51445	(Trans)glycosidases
RPE_4622	SSF56601	beta-lactamase/transpeptidase-like
RPE_4625	SSF56784	HAD-like
RPE_4625	SSF81653	Calcium ATPase, transduction domain A
RPE_4625	SSF81665	Calcium ATPase, transmembrane domain M
RPE_4627	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_4627	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_4627	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4627	SSF55781	GAF domain-like
RPE_4627	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_4628	SSF52172	CheY-like
RPE_4629	SSF46785	"Winged helix" DNA-binding domain
RPE_4629	SSF51206	cAMP-binding domain-like
RPE_4630	SSF48452	TPR-like
RPE_4630	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4630	SSF55073	Nucleotide cyclase
RPE_4631	SSF48264	Cytochrome P450
RPE_4633	SSF54909	Dimeric alpha+beta barrel
RPE_4635	SSF47413	lambda repressor-like DNA-binding domains
RPE_4635	SSF55234	Cyanase C-terminal domain
RPE_4636	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4637	SSF161098	MetI-like
RPE_4638	SSF53850	Periplasmic binding protein-like II
RPE_4639	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4639	SSF55785	PYP-like sensor domain (PAS domain)
RPE_4640	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4641	SSF50494	Trypsin-like serine proteases
RPE_4642	SSF50494	Trypsin-like serine proteases
RPE_4642	SSF52743	Subtilisin-like
RPE_4643	SSF50494	Trypsin-like serine proteases
RPE_4643	SSF56024	Phospholipase D/nuclease
RPE_4644	SSF103473	MFS general substrate transporter
RPE_4646	SSF53927	Cytidine deaminase-like
RPE_4647	SSF50692	ADC-like
RPE_4647	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
RPE_4647	SSF54292	2Fe-2S ferredoxin-like
RPE_4647	SSF54862	4Fe-4S ferredoxins
RPE_4648	SSF140490	Nqo1C-terminal domain-like
RPE_4648	SSF142019	Nqo1 FMN-binding domain-like
RPE_4648	SSF142984	Nqo1 middle domain-like
RPE_4648	SSF52833	Thioredoxin-like
RPE_4649	SSF52833	Thioredoxin-like
RPE_4650	SSF46785	"Winged helix" DNA-binding domain
RPE_4650	SSF53850	Periplasmic binding protein-like II
RPE_4651	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPE_4651	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPE_4651	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_4652	SSF111369	HlyD-like secretion proteins
RPE_4655	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_4655	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_4656	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_4656	SSF52172	CheY-like
RPE_4657	SSF81342	Transmembrane di-heme cytochromes
RPE_4658	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPE_4658	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPE_4658	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_4659	SSF111369	HlyD-like secretion proteins
RPE_4662	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_4663	SSF55785	PYP-like sensor domain (PAS domain)
RPE_4665	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4666	SSF111369	HlyD-like secretion proteins
RPE_4667	SSF46689	Homeodomain-like
RPE_4667	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_4668	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_4669	SSF52172	CheY-like
RPE_4669	SSF52738	Methylesterase CheB, C-terminal domain
RPE_4670	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
RPE_4670	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_4671	SSF50341	CheW-like
RPE_4672	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_4673	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_4674	SSF50341	CheW-like
RPE_4675	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RPE_4675	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_4675	SSF50341	CheW-like
RPE_4675	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_4676	SSF52172	CheY-like
RPE_4677	SSF52091	SpoIIaa-like
RPE_4678	SSF50129	GroES-like
RPE_4678	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_4679	SSF51316	Mss4-like
RPE_4680	SSF53474	alpha/beta-Hydrolases
RPE_4681	SSF52964	TolB, N-terminal domain
RPE_4682	SSF53822	Periplasmic binding protein-like I
RPE_4683	SSF50974	Nitrous oxide reductase, N-terminal domain
RPE_4684	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4689	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4689	SSF90123	ABC transporter transmembrane region
RPE_4692	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_4692	SSF54862	4Fe-4S ferredoxins
RPE_4693	SSF55103	FAD-linked oxidases, C-terminal domain
RPE_4693	SSF56176	FAD-binding/transporter-associated domain-like
RPE_4694	SSF55103	FAD-linked oxidases, C-terminal domain
RPE_4694	SSF56176	FAD-binding/transporter-associated domain-like
RPE_4695	SSF46689	Homeodomain-like
RPE_4695	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_4699	SSF140990	FtsH protease domain-like
RPE_4699	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4700	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_4701	SSF48452	TPR-like
RPE_4702	SSF103088	OmpA-like
RPE_4703	SSF46689	Homeodomain-like
RPE_4703	SSF51182	RmlC-like cupins
RPE_4704	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_4705	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_4706	SSF141868	EAL domain-like
RPE_4706	SSF55073	Nucleotide cyclase
RPE_4707	SSF52964	TolB, N-terminal domain
RPE_4707	SSF69304	Tricorn protease N-terminal domain
RPE_4708	SSF74653	TolA/TonB C-terminal domain
RPE_4713	SSF46689	Homeodomain-like
RPE_4713	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_4714	SSF54909	Dimeric alpha+beta barrel
RPE_4715	SSF54427	NTF2-like
RPE_4716	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_4717	SSF143120	YefM-like
RPE_4719	SSF56655	Carbohydrate phosphatase
RPE_4720	SSF81901	HCP-like
RPE_4721	SSF51391	Thiamin phosphate synthase
RPE_4722	SSF51569	Aldolase
RPE_4723	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
RPE_4725	SSF53748	Phosphoglycerate kinase
RPE_4728	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_4728	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPE_4729	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_4729	SSF52922	TK C-terminal domain-like
RPE_4731	SSF102829	Cell division protein ZapA-like
RPE_4733	SSF141868	EAL domain-like
RPE_4733	SSF55073	Nucleotide cyclase
RPE_4733	SSF55785	PYP-like sensor domain (PAS domain)
RPE_4734	SSF54909	Dimeric alpha+beta barrel
RPE_4735	SSF48452	TPR-like
RPE_4735	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_4735	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_4736	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPE_4737	SSF103473	MFS general substrate transporter
RPE_4741	SSF55718	SCP-like
RPE_4742	SSF143968	UbiD C-terminal domain-like
RPE_4742	SSF50475	FMN-binding split barrel
RPE_4743	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
RPE_4746	SSF47413	lambda repressor-like DNA-binding domains
RPE_4747	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
RPE_4748	SSF46689	Homeodomain-like
RPE_4751	SSF49503	Cupredoxins
RPE_4751	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
RPE_4752	SSF81442	Cytochrome c oxidase subunit I-like
RPE_4755	SSF110111	Ctag/Cox11
RPE_4756	SSF81452	Cytochrome c oxidase subunit III-like
RPE_4759	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPE_4760	SSF63411	LuxS/MPP-like metallohydrolase
RPE_4761	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_4763	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_4767	SSF46785	"Winged helix" DNA-binding domain
RPE_4767	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4768	SSF53927	Cytidine deaminase-like
RPE_4769	SSF46929	DNA helicase RuvA subunit, C-terminal domain
RPE_4769	SSF47781	RuvA domain 2-like
RPE_4769	SSF50249	Nucleic acid-binding proteins
RPE_4770	SSF53098	Ribonuclease H-like
RPE_4771	SSF75625	YebC-like
RPE_4772	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_4773	SSF102114	Radical SAM enzymes
RPE_4774	SSF56300	Metallo-dependent phosphatases
RPE_4775	SSF100950	NagB/RpiA/CoA transferase-like
RPE_4778	SSF81333	F1F0 ATP synthase subunit C
RPE_4779	SSF81336	F1F0 ATP synthase subunit A
RPE_4781	SSF52833	Thioredoxin-like
RPE_4783	SSF111038	YjbQ-like
RPE_4784	SSF103473	MFS general substrate transporter
RPE_4785	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_4785	SSF52172	CheY-like
RPE_4786	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_4786	SSF52172	CheY-like
RPE_4786	SSF55785	PYP-like sensor domain (PAS domain)
RPE_4786	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_4787	SSF53383	PLP-dependent transferases
RPE_4788	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_4789	SSF56925	OMPA-like
RPE_4791	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4792	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RPE_4793	SSF53807	"Helical backbone" metal receptor
RPE_4794	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4794	SSF90002	Hypothetical protein YjiA, C-terminal domain
RPE_4795	SSF50998	Quinoprotein alcohol dehydrogenase-like
RPE_4800	SSF55298	YjgF-like
RPE_4801	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_4802	SSF50621	Alanine racemase C-terminal domain-like
RPE_4802	SSF51419	PLP-binding barrel
RPE_4804	SSF55486	Metalloproteases ("zincins"), catalytic domain
RPE_4807	SSF53800	Chelatase
RPE_4808	SSF117892	Band 7/SPFH domain
RPE_4811	SSF111304	Recombination protein RecR
RPE_4812	SSF82607	YbaB-like
RPE_4813	SSF48019	post-AAA+ oligomerization domain-like
RPE_4813	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4814	SSF54197	HIT-like
RPE_4815	SSF55811	Nudix
RPE_4816	SSF53613	Ribokinase-like
RPE_4817	SSF50630	Acid proteases
RPE_4818	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4821	SSF47807	5' to 3' exonuclease, C-terminal subdomain
RPE_4821	SSF53098	Ribonuclease H-like
RPE_4821	SSF56672	DNA/RNA polymerases
RPE_4821	SSF88723	PIN domain-like
RPE_4822	SSF53271	PRTase-like
RPE_4826	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_4827	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_4828	SSF110857	Gamma-glutamyl cyclotransferase-like
RPE_4829	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
RPE_4832	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4834	SSF52172	CheY-like
RPE_4835	SSF53383	PLP-dependent transferases
RPE_4836	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_4837	SSF53383	PLP-dependent transferases
RPE_4839	SSF69118	AhpD-like
RPE_4840	SSF50621	Alanine racemase C-terminal domain-like
RPE_4840	SSF51419	PLP-binding barrel
RPE_4842	SSF48557	L-aspartase-like
RPE_4843	SSF52833	Thioredoxin-like
RPE_4844	SSF54909	Dimeric alpha+beta barrel
RPE_4847	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_4847	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_4848	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_4848	SSF52467	DHS-like NAD/FAD-binding domain
RPE_4849	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_4850	SSF89028	Cobalamin adenosyltransferase-like
RPE_4853	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_4853	SSF52172	CheY-like
RPE_4853	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_4854	SSF52374	Nucleotidylyl transferase
RPE_4855	SSF48150	DNA-glycosylase
RPE_4858	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_4860	SSF47598	Ribbon-helix-helix
RPE_4862	SSF52172	CheY-like
RPE_4863	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_4863	SSF52172	CheY-like
RPE_4863	SSF55785	PYP-like sensor domain (PAS domain)
RPE_4863	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_4864	SSF50346	PRC-barrel domain
RPE_4865	SSF51011	Glycosyl hydrolase domain
RPE_4865	SSF51445	(Trans)glycosidases
RPE_4868	SSF81301	Nucleotidyltransferase
RPE_4869	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
RPE_4869	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
RPE_4871	SSF50952	Soluble quinoprotein glucose dehydrogenase
RPE_4872	SSF56300	Metallo-dependent phosphatases
RPE_4873	SSF52980	Restriction endonuclease-like
RPE_4874	SSF52980	Restriction endonuclease-like
RPE_4875	SSF81301	Nucleotidyltransferase
RPE_4876	SSF51283	dUTPase-like
RPE_4877	SSF53383	PLP-dependent transferases
RPE_4878	SSF52266	SGNH hydrolase
RPE_4879	SSF52266	SGNH hydrolase
RPE_4881	SSF110069	ApaG-like
RPE_4882	SSF118352	HSP33 redox switch-like
RPE_4882	SSF64397	Hsp33 domain
RPE_4883	SSF53671	Aspartate/ornithine carbamoyltransferase
RPE_4884	SSF53383	PLP-dependent transferases
RPE_4886	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_4886	SSF52172	CheY-like
RPE_4887	SSF109755	PhoU-like
RPE_4888	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4889	SSF161098	MetI-like
RPE_4890	SSF161098	MetI-like
RPE_4891	SSF53850	Periplasmic binding protein-like II
RPE_4892	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_4892	SSF55785	PYP-like sensor domain (PAS domain)
RPE_4892	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_4895	SSF103088	OmpA-like
RPE_4896	SSF88713	Glycoside hydrolase/deacetylase
RPE_4897	SSF110942	HSP90 C-terminal domain
RPE_4897	SSF54211	Ribosomal protein S5 domain 2-like
RPE_4897	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_4898	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_4899	SSF52172	CheY-like
RPE_4901	SSF81342	Transmembrane di-heme cytochromes
RPE_4906	SSF100950	NagB/RpiA/CoA transferase-like
RPE_4907	SSF53167	Purine and uridine phosphorylases
RPE_4908	SSF56796	Dehydroquinate synthase-like
RPE_4909	SSF81901	HCP-like
RPE_4910	SSF53850	Periplasmic binding protein-like II
RPE_4911	SSF56801	Acetyl-CoA synthetase-like
RPE_4912	SSF47819	HRDC-like
RPE_4912	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_4915	SSF109604	HD-domain/PDEase-like
RPE_4915	SSF52172	CheY-like
RPE_4918	SSF55068	Peptide methionine sulfoxide reductase
RPE_4920	SSF46992	Ribosomal protein S20