RPD_0072	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPD_0072	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPD_0089	PWY-5381	pyridine nucleotide cycling (plants)
RPD_0093	PWY-5386	methylglyoxal degradation I
RPD_0099	PWY-2941	L-lysine biosynthesis II
RPD_0099	PWY-2942	L-lysine biosynthesis III
RPD_0099	PWY-5097	L-lysine biosynthesis VI
RPD_0099	PWY-6559	spermidine biosynthesis II
RPD_0099	PWY-6562	norspermidine biosynthesis
RPD_0099	PWY-7153	grixazone biosynthesis
RPD_0100	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
RPD_0100	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
RPD_0100	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
RPD_0100	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
RPD_0100	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
RPD_0100	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
RPD_0100	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
RPD_0100	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
RPD_0100	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
RPD_0100	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
RPD_0111	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPD_0150	PWY-6123	inosine-5'-phosphate biosynthesis I
RPD_0150	PWY-6124	inosine-5'-phosphate biosynthesis II
RPD_0150	PWY-7234	inosine-5'-phosphate biosynthesis III
RPD_0189	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPD_0191	PWY-7205	CMP phosphorylation
RPD_0199	PWY-4381	fatty acid biosynthesis initiation I
RPD_0199	PWY-5743	3-hydroxypropanoate cycle
RPD_0199	PWY-5744	glyoxylate assimilation
RPD_0199	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPD_0199	PWY-6679	jadomycin biosynthesis
RPD_0199	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPD_0200	PWY-2161	folate polyglutamylation
RPD_0208	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RPD_0208	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPD_0208	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPD_0208	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
RPD_0211	PWY-5839	menaquinol-7 biosynthesis
RPD_0211	PWY-5844	menaquinol-9 biosynthesis
RPD_0211	PWY-5849	menaquinol-6 biosynthesis
RPD_0211	PWY-5890	menaquinol-10 biosynthesis
RPD_0211	PWY-5891	menaquinol-11 biosynthesis
RPD_0211	PWY-5892	menaquinol-12 biosynthesis
RPD_0211	PWY-5895	menaquinol-13 biosynthesis
RPD_0220	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPD_0220	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPD_0220	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPD_0220	PWY-5994	palmitate biosynthesis I (animals and fungi)
RPD_0220	PWY-6113	superpathway of mycolate biosynthesis
RPD_0220	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPD_0220	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPD_0220	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPD_0220	PWYG-321	mycolate biosynthesis
RPD_0222	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPD_0222	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPD_0222	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPD_0222	PWY-6113	superpathway of mycolate biosynthesis
RPD_0222	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPD_0222	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPD_0222	PWY-7096	triclosan resistance
RPD_0222	PWYG-321	mycolate biosynthesis
RPD_0261	PWY-6167	flavin biosynthesis II (archaea)
RPD_0264	PWY-2161	folate polyglutamylation
RPD_0286	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
RPD_0287	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
RPD_0293	PWY-6164	3-dehydroquinate biosynthesis I
RPD_0294	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPD_0297	PWY-4381	fatty acid biosynthesis initiation I
RPD_0297	PWY-5743	3-hydroxypropanoate cycle
RPD_0297	PWY-5744	glyoxylate assimilation
RPD_0297	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPD_0297	PWY-6679	jadomycin biosynthesis
RPD_0297	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPD_0305	PWY-5676	acetyl-CoA fermentation to butanoate II
RPD_0305	PWY-5741	ethylmalonyl-CoA pathway
RPD_0305	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RPD_0317	PWY-7560	methylerythritol phosphate pathway II
RPD_0320	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPD_0320	PWY-2361	3-oxoadipate degradation
RPD_0320	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
RPD_0343	PWY-6936	seleno-amino acid biosynthesis
RPD_0344	PWY-622	starch biosynthesis
RPD_0345	PWY-622	starch biosynthesis
RPD_0351	PWY-4381	fatty acid biosynthesis initiation I
RPD_0351	PWY-5743	3-hydroxypropanoate cycle
RPD_0351	PWY-5744	glyoxylate assimilation
RPD_0351	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPD_0351	PWY-6679	jadomycin biosynthesis
RPD_0351	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPD_0365	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPD_0365	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPD_0379	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPD_0379	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPD_0384	PWY-1042	glycolysis IV (plant cytosol)
RPD_0384	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RPD_0384	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPD_0384	PWY-5723	Rubisco shunt
RPD_0384	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPD_0384	PWY-6886	1-butanol autotrophic biosynthesis
RPD_0384	PWY-6901	superpathway of glucose and xylose degradation
RPD_0384	PWY-7003	glycerol degradation to butanol
RPD_0384	PWY-7124	ethylene biosynthesis V (engineered)
RPD_0384	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RPD_0385	PWY-2941	L-lysine biosynthesis II
RPD_0385	PWY-2942	L-lysine biosynthesis III
RPD_0385	PWY-5097	L-lysine biosynthesis VI
RPD_0387	PWY-5686	UMP biosynthesis
RPD_0396	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
RPD_0403	PWY-6157	autoinducer AI-1 biosynthesis
RPD_0409	PWY-3961	phosphopantothenate biosynthesis II
RPD_0428	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPD_0438	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPD_0462	PWY-5532	adenosine nucleotides degradation IV
RPD_0462	PWY-5723	Rubisco shunt
RPD_0469	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPD_0469	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPD_0471	PWY-5667	CDP-diacylglycerol biosynthesis I
RPD_0471	PWY-5981	CDP-diacylglycerol biosynthesis III
RPD_0474	PWY-6672	<i>cis</i>-genanyl-CoA degradation
RPD_0474	PWY-7118	chitin degradation to ethanol
RPD_0477	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RPD_0477	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RPD_0478	PWY-3781	aerobic respiration I (cytochrome c)
RPD_0478	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RPD_0478	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPD_0478	PWY-5690	TCA cycle II (plants and fungi)
RPD_0478	PWY-6728	methylaspartate cycle
RPD_0478	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPD_0478	PWY-7254	TCA cycle VII (acetate-producers)
RPD_0478	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPD_0479	PWY-3781	aerobic respiration I (cytochrome c)
RPD_0479	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RPD_0479	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPD_0479	PWY-5690	TCA cycle II (plants and fungi)
RPD_0479	PWY-6728	methylaspartate cycle
RPD_0479	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPD_0479	PWY-7254	TCA cycle VII (acetate-producers)
RPD_0479	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPD_0488	PWY-6854	ethylene biosynthesis III (microbes)
RPD_0490	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RPD_0493	PWY-2941	L-lysine biosynthesis II
RPD_0493	PWY-2942	L-lysine biosynthesis III
RPD_0493	PWY-5097	L-lysine biosynthesis VI
RPD_0493	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPD_0493	PWY-6559	spermidine biosynthesis II
RPD_0493	PWY-6562	norspermidine biosynthesis
RPD_0493	PWY-7153	grixazone biosynthesis
RPD_0493	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPD_0495	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPD_0495	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPD_0495	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPD_0495	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPD_0507	PWY-6829	tRNA methylation (yeast)
RPD_0507	PWY-7285	methylwyosine biosynthesis
RPD_0507	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
RPD_0514	PWY-2941	L-lysine biosynthesis II
RPD_0514	PWY-5097	L-lysine biosynthesis VI
RPD_0535	PWY-1622	formaldehyde assimilation I (serine pathway)
RPD_0535	PWY-5392	reductive TCA cycle II
RPD_0535	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPD_0535	PWY-5690	TCA cycle II (plants and fungi)
RPD_0535	PWY-5913	TCA cycle VI (obligate autotrophs)
RPD_0535	PWY-6728	methylaspartate cycle
RPD_0535	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPD_0535	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPD_0535	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPD_0536	PWY-5392	reductive TCA cycle II
RPD_0536	PWY-5537	pyruvate fermentation to acetate V
RPD_0536	PWY-5538	pyruvate fermentation to acetate VI
RPD_0536	PWY-5690	TCA cycle II (plants and fungi)
RPD_0536	PWY-5913	TCA cycle VI (obligate autotrophs)
RPD_0536	PWY-6728	methylaspartate cycle
RPD_0536	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPD_0536	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPD_0539	PWY-5392	reductive TCA cycle II
RPD_0539	PWY-5537	pyruvate fermentation to acetate V
RPD_0539	PWY-5538	pyruvate fermentation to acetate VI
RPD_0539	PWY-5690	TCA cycle II (plants and fungi)
RPD_0539	PWY-5913	TCA cycle VI (obligate autotrophs)
RPD_0539	PWY-6728	methylaspartate cycle
RPD_0539	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPD_0539	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPD_0544	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RPD_0545	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RPD_0550	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
RPD_0550	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RPD_0557	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPD_0559	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPD_0570	PWY-5381	pyridine nucleotide cycling (plants)
RPD_0570	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
RPD_0596	PWY-3781	aerobic respiration I (cytochrome c)
RPD_0596	PWY-4521	arsenite oxidation I (respiratory)
RPD_0596	PWY-6692	Fe(II) oxidation
RPD_0596	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPD_0596	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
RPD_0602	PWY-4381	fatty acid biosynthesis initiation I
RPD_0602	PWY-5743	3-hydroxypropanoate cycle
RPD_0602	PWY-5744	glyoxylate assimilation
RPD_0602	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPD_0602	PWY-6679	jadomycin biosynthesis
RPD_0602	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPD_0603	PWY-6654	phosphopantothenate biosynthesis III
RPD_0617	PWY-5506	methanol oxidation to formaldehyde IV
RPD_0623	PWY-1881	formate oxidation to CO<sub>2</sub>
RPD_0623	PWY-5497	purine nucleobases degradation II (anaerobic)
RPD_0623	PWY-6696	oxalate degradation III
RPD_0635	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPD_0635	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPD_0635	PWY-6268	adenosylcobalamin salvage from cobalamin
RPD_0635	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPD_0638	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPD_0638	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPD_0638	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPD_0640	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPD_0640	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPD_0640	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPD_0641	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPD_0641	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
RPD_0658	PWY-2941	L-lysine biosynthesis II
RPD_0658	PWY-2942	L-lysine biosynthesis III
RPD_0658	PWY-5097	L-lysine biosynthesis VI
RPD_0694	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
RPD_0694	PWY-2201	folate transformations I
RPD_0694	PWY-3841	folate transformations II
RPD_0694	PWY-5030	L-histidine degradation III
RPD_0694	PWY-5497	purine nucleobases degradation II (anaerobic)
RPD_0694	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
RPD_0703	PWY-7158	L-phenylalanine degradation V
RPD_0713	PWY-4983	L-citrulline-nitric oxide cycle
RPD_0713	PWY-4984	urea cycle
RPD_0713	PWY-5	canavanine biosynthesis
RPD_0713	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPD_0713	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPD_0714	PWY-5491	diethylphosphate degradation
RPD_0719	PWY-6123	inosine-5'-phosphate biosynthesis I
RPD_0719	PWY-6124	inosine-5'-phosphate biosynthesis II
RPD_0719	PWY-7234	inosine-5'-phosphate biosynthesis III
RPD_0720	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RPD_0720	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
RPD_0720	PWY-6164	3-dehydroquinate biosynthesis I
RPD_0722	PWY-4041	&gamma;-glutamyl cycle
RPD_0722	PWY-5826	hypoglycin biosynthesis
RPD_0729	PWY-6654	phosphopantothenate biosynthesis III
RPD_0730	PWY-3781	aerobic respiration I (cytochrome c)
RPD_0730	PWY-4521	arsenite oxidation I (respiratory)
RPD_0730	PWY-6692	Fe(II) oxidation
RPD_0730	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPD_0731	PWY-3781	aerobic respiration I (cytochrome c)
RPD_0731	PWY-4521	arsenite oxidation I (respiratory)
RPD_0731	PWY-6692	Fe(II) oxidation
RPD_0731	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPD_0748	PWY-3821	galactose degradation III
RPD_0748	PWY-6317	galactose degradation I (Leloir pathway)
RPD_0748	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RPD_0748	PWY-6527	stachyose degradation
RPD_0748	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
RPD_0748	PWY-7344	UDP-D-galactose biosynthesis
RPD_0749	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
RPD_0763	PWY-4041	&gamma;-glutamyl cycle
RPD_0763	PWY-5826	hypoglycin biosynthesis
RPD_0780	PWY-6832	2-aminoethylphosphonate degradation II
RPD_0785	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPD_0785	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPD_0785	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPD_0785	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPD_0788	PWY-5686	UMP biosynthesis
RPD_0790	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPD_0790	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPD_0790	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPD_0790	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPD_0807	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPD_0807	PWY-5109	2-methylbutanoate biosynthesis
RPD_0807	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RPD_0807	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RPD_0807	PWY-5177	glutaryl-CoA degradation
RPD_0807	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPD_0807	PWY-6435	4-hydroxybenzoate biosynthesis V
RPD_0807	PWY-6583	pyruvate fermentation to butanol I
RPD_0807	PWY-6863	pyruvate fermentation to hexanol
RPD_0807	PWY-6883	pyruvate fermentation to butanol II
RPD_0807	PWY-6944	androstenedione degradation
RPD_0807	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RPD_0807	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RPD_0807	PWY-7007	methyl ketone biosynthesis
RPD_0807	PWY-7046	4-coumarate degradation (anaerobic)
RPD_0807	PWY-7094	fatty acid salvage
RPD_0807	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RPD_0807	PWY-735	jasmonic acid biosynthesis
RPD_0807	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RPD_0810	PWY-6840	homoglutathione biosynthesis
RPD_0810	PWY-7255	ergothioneine biosynthesis I (bacteria)
RPD_0815	PWY-3781	aerobic respiration I (cytochrome c)
RPD_0815	PWY-4521	arsenite oxidation I (respiratory)
RPD_0815	PWY-6692	Fe(II) oxidation
RPD_0815	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPD_0838	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPD_0838	PWY-7536	2-amino-3-hydroxycyclopent-2-enone biosynthesis
RPD_0870	PWY-3801	sucrose degradation II (sucrose synthase)
RPD_0870	PWY-6527	stachyose degradation
RPD_0870	PWY-6981	chitin biosynthesis
RPD_0870	PWY-7238	sucrose biosynthesis II
RPD_0870	PWY-7343	UDP-glucose biosynthesis
RPD_0877	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPD_0880	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPD_0881	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPD_0896	PWY-4981	L-proline biosynthesis II (from arginine)
RPD_0896	PWY-4984	urea cycle
RPD_0896	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPD_0904	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPD_0929	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPD_0929	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPD_0929	PWY-6268	adenosylcobalamin salvage from cobalamin
RPD_0929	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPD_0932	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPD_0932	PWY-5109	2-methylbutanoate biosynthesis
RPD_0932	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RPD_0932	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RPD_0932	PWY-5177	glutaryl-CoA degradation
RPD_0932	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPD_0932	PWY-6435	4-hydroxybenzoate biosynthesis V
RPD_0932	PWY-6583	pyruvate fermentation to butanol I
RPD_0932	PWY-6863	pyruvate fermentation to hexanol
RPD_0932	PWY-6883	pyruvate fermentation to butanol II
RPD_0932	PWY-6944	androstenedione degradation
RPD_0932	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RPD_0932	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RPD_0932	PWY-7007	methyl ketone biosynthesis
RPD_0932	PWY-7046	4-coumarate degradation (anaerobic)
RPD_0932	PWY-7094	fatty acid salvage
RPD_0932	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RPD_0932	PWY-735	jasmonic acid biosynthesis
RPD_0932	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RPD_0936	PWY-4983	L-citrulline-nitric oxide cycle
RPD_0936	PWY-4984	urea cycle
RPD_0936	PWY-5	canavanine biosynthesis
RPD_0936	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPD_0936	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPD_0938	PWY-2941	L-lysine biosynthesis II
RPD_0938	PWY-2942	L-lysine biosynthesis III
RPD_0938	PWY-5097	L-lysine biosynthesis VI
RPD_0950	PWY-31	canavanine degradation
RPD_0950	PWY-4984	urea cycle
RPD_0950	PWY-6305	putrescine biosynthesis IV
RPD_0950	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RPD_0952	PWY-5941	glycogen degradation II (eukaryotic)
RPD_0952	PWY-622	starch biosynthesis
RPD_0952	PWY-6731	starch degradation III
RPD_0952	PWY-6737	starch degradation V
RPD_0952	PWY-7238	sucrose biosynthesis II
RPD_0955	PWY-5686	UMP biosynthesis
RPD_0976	PWY-723	alkylnitronates degradation
RPD_0983	PWY-6216	3-chlorobenzoate degradation II (via protocatechuate)
RPD_0983	PWY-6217	3,4-dichlorobenzoate degradation
RPD_1000	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPD_1031	PWY-5392	reductive TCA cycle II
RPD_1031	PWY-5537	pyruvate fermentation to acetate V
RPD_1031	PWY-5538	pyruvate fermentation to acetate VI
RPD_1031	PWY-5690	TCA cycle II (plants and fungi)
RPD_1031	PWY-5913	TCA cycle VI (obligate autotrophs)
RPD_1031	PWY-6728	methylaspartate cycle
RPD_1031	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPD_1031	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPD_1035	PWY-4261	glycerol degradation I
RPD_1035	PWY-6118	glycerol-3-phosphate shuttle
RPD_1035	PWY-6952	glycerophosphodiester degradation
RPD_1036	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPD_1036	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPD_1037	PWY-4261	glycerol degradation I
RPD_1043	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPD_1050	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPD_1051	PWY-5723	Rubisco shunt
RPD_1052	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPD_1052	PWY-5723	Rubisco shunt
RPD_1052	PWY-6891	thiazole biosynthesis II (Bacillus)
RPD_1052	PWY-6892	thiazole biosynthesis I (E. coli)
RPD_1052	PWY-6901	superpathway of glucose and xylose degradation
RPD_1052	PWY-7560	methylerythritol phosphate pathway II
RPD_1053	PWY-1042	glycolysis IV (plant cytosol)
RPD_1053	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPD_1053	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPD_1053	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPD_1053	PWY-7385	1,3-propanediol biosynthesis (engineered)
RPD_1054	PWY-5532	adenosine nucleotides degradation IV
RPD_1054	PWY-5723	Rubisco shunt
RPD_1063	PWY-6823	molybdenum cofactor biosynthesis
RPD_1085	PWY-6823	molybdenum cofactor biosynthesis
RPD_1085	PWY-6891	thiazole biosynthesis II (Bacillus)
RPD_1085	PWY-6892	thiazole biosynthesis I (E. coli)
RPD_1085	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RPD_1086	PWY-3081	L-lysine biosynthesis V
RPD_1086	PWY-6871	3-methylbutanol biosynthesis
RPD_1093	PWY-5692	allantoin degradation to glyoxylate II
RPD_1093	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
RPD_1103	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RPD_1103	PWY-5143	long-chain fatty acid activation
RPD_1103	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
RPD_1103	PWY-5885	wax esters biosynthesis II
RPD_1103	PWY-5972	stearate biosynthesis I (animals and fungi)
RPD_1103	PWY-5995	linoleate biosynthesis I (plants)
RPD_1103	PWY-6000	&gamma;-linolenate biosynthesis II (animals)
RPD_1103	PWY-6001	linoleate biosynthesis II (animals)
RPD_1103	PWY-6803	phosphatidylcholine acyl editing
RPD_1103	PWY-6873	long chain fatty acid ester synthesis for microdiesel production
RPD_1103	PWY-6920	6-gingerol analog biosynthesis
RPD_1103	PWY-6951	RPD_1103
RPD_1103	PWY-7033	alkane biosynthesis II
RPD_1103	PWY-7035	(<i>Z</i>)-9-tricosene biosynthesis
RPD_1103	PWY-7049	icosapentaenoate biosynthesis II (metazoa)
RPD_1103	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
RPD_1103	PWY-7094	fatty acid salvage
RPD_1103	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
RPD_1104	PWY-5344	L-homocysteine biosynthesis
RPD_1104	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RPD_1115	PWY-3821	galactose degradation III
RPD_1115	PWY-6317	galactose degradation I (Leloir pathway)
RPD_1115	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RPD_1115	PWY-6527	stachyose degradation
RPD_1115	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
RPD_1115	PWY-7344	UDP-D-galactose biosynthesis
RPD_1126	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPD_1126	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPD_1126	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPD_1126	PWY-6113	superpathway of mycolate biosynthesis
RPD_1126	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPD_1126	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPD_1126	PWY-7096	triclosan resistance
RPD_1126	PWYG-321	mycolate biosynthesis
RPD_1127	PWY-1281	sulfoacetaldehyde degradation I
RPD_1127	PWY-5482	pyruvate fermentation to acetate II
RPD_1127	PWY-5485	pyruvate fermentation to acetate IV
RPD_1127	PWY-5497	purine nucleobases degradation II (anaerobic)
RPD_1127	PWY-6637	sulfolactate degradation II
RPD_1128	PWY-5482	pyruvate fermentation to acetate II
RPD_1128	PWY-5485	pyruvate fermentation to acetate IV
RPD_1128	PWY-5497	purine nucleobases degradation II (anaerobic)
RPD_1143	PWY-5941	glycogen degradation II (eukaryotic)
RPD_1143	PWY-6724	starch degradation II
RPD_1143	PWY-6737	starch degradation V
RPD_1143	PWY-7238	sucrose biosynthesis II
RPD_1153	PWY-5278	sulfite oxidation III
RPD_1153	PWY-5340	sulfate activation for sulfonation
RPD_1153	PWY-6683	sulfate reduction III (assimilatory)
RPD_1153	PWY-6932	selenate reduction
RPD_1188	PWY-5381	pyridine nucleotide cycling (plants)
RPD_1213	PWY-7560	methylerythritol phosphate pathway II
RPD_1224	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPD_1224	PWY-6549	L-glutamine biosynthesis III
RPD_1224	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPD_1224	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPD_1227	PWY-5316	nicotine biosynthesis
RPD_1227	PWY-5381	pyridine nucleotide cycling (plants)
RPD_1227	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
RPD_1227	PWY-7342	superpathway of nicotine biosynthesis
RPD_1228	PWY-5316	nicotine biosynthesis
RPD_1228	PWY-7342	superpathway of nicotine biosynthesis
RPD_1229	PWY-5316	nicotine biosynthesis
RPD_1229	PWY-7342	superpathway of nicotine biosynthesis
RPD_1239	PWY-5686	UMP biosynthesis
RPD_1246	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPD_1246	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPD_1249	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPD_1249	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPD_1257	PWY-5443	aminopropanol phosphate biosynthesis I
RPD_1263	PWY-6167	flavin biosynthesis II (archaea)
RPD_1263	PWY-6168	flavin biosynthesis III (fungi)
RPD_1263	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RPD_1278	PWY-6823	molybdenum cofactor biosynthesis
RPD_1280	PWY-5269	cardiolipin biosynthesis II
RPD_1280	PWY-5668	cardiolipin biosynthesis I
RPD_1300	PWY-6703	preQ<sub>0</sub> biosynthesis
RPD_1302	PWY-3781	aerobic respiration I (cytochrome c)
RPD_1302	PWY-6692	Fe(II) oxidation
RPD_1302	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
RPD_1302	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPD_1307	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RPD_1307	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RPD_1312	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPD_1312	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPD_1312	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPD_1312	PWY-6113	superpathway of mycolate biosynthesis
RPD_1312	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPD_1312	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPD_1312	PWY-7096	triclosan resistance
RPD_1312	PWYG-321	mycolate biosynthesis
RPD_1314	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPD_1339	PWY-5344	L-homocysteine biosynthesis
RPD_1339	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RPD_1351	PWY-5392	reductive TCA cycle II
RPD_1351	PWY-5537	pyruvate fermentation to acetate V
RPD_1351	PWY-5538	pyruvate fermentation to acetate VI
RPD_1351	PWY-5690	TCA cycle II (plants and fungi)
RPD_1351	PWY-5913	TCA cycle VI (obligate autotrophs)
RPD_1351	PWY-6728	methylaspartate cycle
RPD_1351	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPD_1351	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPD_1375	PWY-6728	methylaspartate cycle
RPD_1375	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPD_1375	PWY-7118	chitin degradation to ethanol
RPD_1375	PWY-7294	xylose degradation IV
RPD_1375	PWY-7295	L-arabinose degradation IV
RPD_1379	PWY-5194	siroheme biosynthesis
RPD_1379	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RPD_1381	PWY-6683	sulfate reduction III (assimilatory)
RPD_1385	PWY-381	nitrate reduction II (assimilatory)
RPD_1385	PWY-5675	nitrate reduction V (assimilatory)
RPD_1385	PWY-6549	L-glutamine biosynthesis III
RPD_1385	PWY-6963	ammonia assimilation cycle I
RPD_1385	PWY-6964	ammonia assimilation cycle II
RPD_1402	PWY-1042	glycolysis IV (plant cytosol)
RPD_1402	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RPD_1402	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPD_1402	PWY-5723	Rubisco shunt
RPD_1402	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPD_1402	PWY-6886	1-butanol autotrophic biosynthesis
RPD_1402	PWY-6901	superpathway of glucose and xylose degradation
RPD_1402	PWY-7003	glycerol degradation to butanol
RPD_1402	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RPD_1402	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPD_1405	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
RPD_1414	PWY-3781	aerobic respiration I (cytochrome c)
RPD_1414	PWY-4521	arsenite oxidation I (respiratory)
RPD_1414	PWY-6692	Fe(II) oxidation
RPD_1414	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPD_1424	PWY-6123	inosine-5'-phosphate biosynthesis I
RPD_1424	PWY-7234	inosine-5'-phosphate biosynthesis III
RPD_1443	PWY-7181	pyrimidine deoxyribonucleosides degradation
RPD_1457	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPD_1457	PWY-5686	UMP biosynthesis
RPD_1457	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPD_1464	PWY-6749	CMP-legionaminate biosynthesis I
RPD_1502	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
RPD_1502	PWY-7494	choline degradation IV
RPD_1515	PWY-1341	phenylacetate degradation II (anaerobic)
RPD_1515	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
RPD_1523	PWY-6080	4-ethylphenol degradation (anaerobic)
RPD_1523	PWY-7046	4-coumarate degradation (anaerobic)
RPD_1524	PWY-6080	4-ethylphenol degradation (anaerobic)
RPD_1524	PWY-7046	4-coumarate degradation (anaerobic)
RPD_1525	PWY-6080	4-ethylphenol degradation (anaerobic)
RPD_1525	PWY-7046	4-coumarate degradation (anaerobic)
RPD_1542	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
RPD_1542	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
RPD_1548	PWY-5532	adenosine nucleotides degradation IV
RPD_1548	PWY-5723	Rubisco shunt
RPD_1549	PWY-5532	adenosine nucleotides degradation IV
RPD_1549	PWY-5723	Rubisco shunt
RPD_1571	PWY-3221	dTDP-L-rhamnose biosynthesis II
RPD_1571	PWY-6808	dTDP-D-forosamine biosynthesis
RPD_1571	PWY-6942	dTDP-D-desosamine biosynthesis
RPD_1571	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RPD_1571	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
RPD_1571	PWY-6974	dTDP-L-olivose biosynthesis
RPD_1571	PWY-6976	dTDP-L-mycarose biosynthesis
RPD_1571	PWY-7104	dTDP-L-megosamine biosynthesis
RPD_1571	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
RPD_1571	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
RPD_1571	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
RPD_1571	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
RPD_1571	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
RPD_1571	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
RPD_1571	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
RPD_1571	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
RPD_1574	PWY-3221	dTDP-L-rhamnose biosynthesis II
RPD_1574	PWY-6808	dTDP-D-forosamine biosynthesis
RPD_1574	PWY-6942	dTDP-D-desosamine biosynthesis
RPD_1574	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RPD_1574	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
RPD_1574	PWY-6974	dTDP-L-olivose biosynthesis
RPD_1574	PWY-6976	dTDP-L-mycarose biosynthesis
RPD_1574	PWY-7104	dTDP-L-megosamine biosynthesis
RPD_1574	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
RPD_1574	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
RPD_1574	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
RPD_1574	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
RPD_1574	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
RPD_1574	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
RPD_1574	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
RPD_1574	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
RPD_1583	PWY-2201	folate transformations I
RPD_1583	PWY-5497	purine nucleobases degradation II (anaerobic)
RPD_1591	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RPD_1591	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RPD_1591	PWY-6936	seleno-amino acid biosynthesis
RPD_1591	PWY-702	L-methionine biosynthesis II
RPD_1593	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
RPD_1596	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RPD_1596	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
RPD_1597	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RPD_1599	PWY-6703	preQ<sub>0</sub> biosynthesis
RPD_1609	PWY-3821	galactose degradation III
RPD_1609	PWY-6317	galactose degradation I (Leloir pathway)
RPD_1609	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RPD_1609	PWY-6527	stachyose degradation
RPD_1609	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
RPD_1609	PWY-7344	UDP-D-galactose biosynthesis
RPD_1612	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
RPD_1618	PWY-5659	GDP-mannose biosynthesis
RPD_1618	PWY-6073	alginate biosynthesis I (algal)
RPD_1618	PWY-6082	alginate biosynthesis II (bacterial)
RPD_1618	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
RPD_1628	PWY-6910	hydroxymethylpyrimidine salvage
RPD_1628	PWY-7356	thiamin salvage IV (yeast)
RPD_1628	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RPD_1639	PWY-5674	nitrate reduction IV (dissimilatory)
RPD_1645	PWY-101	photosynthesis light reactions
RPD_1645	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
RPD_1647	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
RPD_1647	PWY-5739	GDP-D-perosamine biosynthesis
RPD_1647	PWY-5740	GDP-L-colitose biosynthesis
RPD_1647	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
RPD_1704	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RPD_1708	PWY-5392	reductive TCA cycle II
RPD_1708	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPD_1708	PWY-5690	TCA cycle II (plants and fungi)
RPD_1708	PWY-5913	TCA cycle VI (obligate autotrophs)
RPD_1708	PWY-6728	methylaspartate cycle
RPD_1708	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPD_1708	PWY-7254	TCA cycle VII (acetate-producers)
RPD_1708	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPD_1737	PWY-5913	TCA cycle VI (obligate autotrophs)
RPD_1737	PWY-6549	L-glutamine biosynthesis III
RPD_1737	PWY-6728	methylaspartate cycle
RPD_1737	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPD_1737	PWY-7124	ethylene biosynthesis V (engineered)
RPD_1737	PWY-7254	TCA cycle VII (acetate-producers)
RPD_1737	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RPD_1747	PWY-6123	inosine-5'-phosphate biosynthesis I
RPD_1747	PWY-6124	inosine-5'-phosphate biosynthesis II
RPD_1747	PWY-7234	inosine-5'-phosphate biosynthesis III
RPD_1748	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPD_1748	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPD_1748	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPD_1749	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPD_1749	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPD_1749	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPD_1752	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPD_1752	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPD_1752	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPD_1768	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPD_1768	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPD_1769	PWY-6123	inosine-5'-phosphate biosynthesis I
RPD_1769	PWY-6124	inosine-5'-phosphate biosynthesis II
RPD_1769	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPD_1769	PWY-7234	inosine-5'-phosphate biosynthesis III
RPD_1771	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPD_1771	PWY-5723	Rubisco shunt
RPD_1773	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPD_1820	PWY-5451	acetone degradation I (to methylglyoxal)
RPD_1820	PWY-5665	vanillin biosynthesis I
RPD_1820	PWY-6398	melatonin degradation I
RPD_1820	PWY-6992	1,5-anhydrofructose degradation
RPD_1820	PWY-7466	acetone degradation III (to propane-1,2-diol)
RPD_1829	PWY-1341	phenylacetate degradation II (anaerobic)
RPD_1829	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
RPD_1838	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPD_1840	PWY-3121	linamarin degradation
RPD_1840	PWY-5176	coumarin biosynthesis (via 2-coumarate)
RPD_1840	PWY-6002	lotaustralin degradation
RPD_1840	PWY-6788	cellulose degradation II (fungi)
RPD_1840	PWY-7089	taxiphyllin bioactivation
RPD_1840	PWY-7091	linustatin bioactivation
RPD_1840	PWY-7092	neolinustatin bioactivation
RPD_1859	PWY-723	alkylnitronates degradation
RPD_1876	PWY-1622	formaldehyde assimilation I (serine pathway)
RPD_1876	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPD_1876	PWY-5913	TCA cycle VI (obligate autotrophs)
RPD_1876	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPD_1876	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
RPD_1876	PWY-6549	L-glutamine biosynthesis III
RPD_1876	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPD_1876	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPD_1876	PWY-7124	ethylene biosynthesis V (engineered)
RPD_1881	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPD_1884	PWY-6215	4-chlorobenzoate degradation
RPD_1927	PWY-5743	3-hydroxypropanoate cycle
RPD_1927	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPD_1927	PWY-6728	methylaspartate cycle
RPD_1927	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPD_1928	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RPD_1929	PWY-5743	3-hydroxypropanoate cycle
RPD_1929	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPD_1929	PWY-6728	methylaspartate cycle
RPD_1929	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPD_1930	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RPD_1930	PWY-6148	tetrahydromethanopterin biosynthesis
RPD_1930	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RPD_1930	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RPD_1931	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RPD_1931	PWY-6148	tetrahydromethanopterin biosynthesis
RPD_1931	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RPD_1931	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RPD_1932	PWY-6614	tetrahydrofolate biosynthesis
RPD_2021	PWY-723	alkylnitronates degradation
RPD_2023	PWY-6654	phosphopantothenate biosynthesis III
RPD_2027	PWY-6695	oxalate degradation II
RPD_2031	PWY-6420	pyrroloquinoline quinone biosynthesis
RPD_2033	PWY-6823	molybdenum cofactor biosynthesis
RPD_2034	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RPD_2034	PWY-3162	L-tryptophan degradation V (side chain pathway)
RPD_2034	PWY-5057	L-valine degradation II
RPD_2034	PWY-5076	L-leucine degradation III
RPD_2034	PWY-5078	L-isoleucine degradation II
RPD_2034	PWY-5079	L-phenylalanine degradation III
RPD_2034	PWY-5082	L-methionine degradation III
RPD_2034	PWY-5480	pyruvate fermentation to ethanol I
RPD_2034	PWY-5486	pyruvate fermentation to ethanol II
RPD_2034	PWY-5751	phenylethanol biosynthesis
RPD_2034	PWY-6028	acetoin degradation
RPD_2034	PWY-6313	serotonin degradation
RPD_2034	PWY-6333	acetaldehyde biosynthesis I
RPD_2034	PWY-6342	noradrenaline and adrenaline degradation
RPD_2034	PWY-6587	pyruvate fermentation to ethanol III
RPD_2034	PWY-6802	salidroside biosynthesis
RPD_2034	PWY-6871	3-methylbutanol biosynthesis
RPD_2034	PWY-7013	L-1,2-propanediol degradation
RPD_2034	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPD_2034	PWY-7118	chitin degradation to ethanol
RPD_2034	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RPD_2034	PWY-7557	dehydrodiconiferyl alcohol degradation
RPD_2052	PWY-6823	molybdenum cofactor biosynthesis
RPD_2054	PWY-181	photorespiration
RPD_2055	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPD_2055	PWY-5723	Rubisco shunt
RPD_2057	PWY-4081	glutathione redox reactions I
RPD_2058	PWY-6164	3-dehydroquinate biosynthesis I
RPD_2059	PWY-7039	phosphatidate metabolism, as a signaling molecule
RPD_2060	PWY-5381	pyridine nucleotide cycling (plants)
RPD_2060	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
RPD_2069	PWY-5101	L-isoleucine biosynthesis II
RPD_2069	PWY-6871	3-methylbutanol biosynthesis
RPD_2071	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPD_2071	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPD_2075	PWY-5669	phosphatidylethanolamine biosynthesis I
RPD_2076	PWY-5669	phosphatidylethanolamine biosynthesis I
RPD_2089	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPD_2089	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPD_2089	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPD_2089	PWY-5994	palmitate biosynthesis I (animals and fungi)
RPD_2089	PWY-6113	superpathway of mycolate biosynthesis
RPD_2089	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPD_2089	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPD_2089	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPD_2089	PWYG-321	mycolate biosynthesis
RPD_2097	PWY-2781	<i>cis</i>-zeatin biosynthesis
RPD_2098	PWY-5101	L-isoleucine biosynthesis II
RPD_2098	PWY-5103	L-isoleucine biosynthesis III
RPD_2098	PWY-5104	L-isoleucine biosynthesis IV
RPD_2098	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
RPD_2098	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RPD_2098	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RPD_2098	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPD_2100	PWY-5101	L-isoleucine biosynthesis II
RPD_2100	PWY-5103	L-isoleucine biosynthesis III
RPD_2100	PWY-5104	L-isoleucine biosynthesis IV
RPD_2100	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
RPD_2100	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RPD_2100	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RPD_2100	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPD_2102	PWY-5101	L-isoleucine biosynthesis II
RPD_2102	PWY-5103	L-isoleucine biosynthesis III
RPD_2102	PWY-5104	L-isoleucine biosynthesis IV
RPD_2102	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPD_2111	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RPD_2112	PWY-6871	3-methylbutanol biosynthesis
RPD_2175	PWY-6157	autoinducer AI-1 biosynthesis
RPD_2188	PWY-5169	cyanurate degradation
RPD_2188	PWY-5703	urea degradation I
RPD_2204	PWY-4381	fatty acid biosynthesis initiation I
RPD_2204	PWY-5743	3-hydroxypropanoate cycle
RPD_2204	PWY-5744	glyoxylate assimilation
RPD_2204	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPD_2204	PWY-6679	jadomycin biosynthesis
RPD_2204	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPD_2214	PWY-6891	thiazole biosynthesis II (Bacillus)
RPD_2214	PWY-6892	thiazole biosynthesis I (E. coli)
RPD_2214	PWY-7560	methylerythritol phosphate pathway II
RPD_2216	PWY-5101	L-isoleucine biosynthesis II
RPD_2216	PWY-5103	L-isoleucine biosynthesis III
RPD_2216	PWY-5104	L-isoleucine biosynthesis IV
RPD_2216	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPD_2233	PWY-5532	adenosine nucleotides degradation IV
RPD_2233	PWY-5723	Rubisco shunt
RPD_2245	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RPD_2245	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RPD_2245	PWY-6936	seleno-amino acid biosynthesis
RPD_2245	PWY-702	L-methionine biosynthesis II
RPD_2252	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPD_2264	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RPD_2264	PWY-6596	adenosine nucleotides degradation I
RPD_2264	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RPD_2269	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RPD_2301	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPD_2301	PWY-7536	2-amino-3-hydroxycyclopent-2-enone biosynthesis
RPD_2302	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RPD_2302	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RPD_2305	PWY-1622	formaldehyde assimilation I (serine pathway)
RPD_2305	PWY-181	photorespiration
RPD_2305	PWY-2161	folate polyglutamylation
RPD_2305	PWY-2201	folate transformations I
RPD_2305	PWY-3661	glycine betaine degradation I
RPD_2305	PWY-3661-1	glycine betaine degradation II (mammalian)
RPD_2305	PWY-3841	folate transformations II
RPD_2305	PWY-5497	purine nucleobases degradation II (anaerobic)
RPD_2306	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPD_2312	PWY-5194	siroheme biosynthesis
RPD_2312	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RPD_2314	PWY-5194	siroheme biosynthesis
RPD_2314	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RPD_2316	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RPD_2319	PWY-5194	siroheme biosynthesis
RPD_2319	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RPD_2324	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPD_2324	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPD_2324	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPD_2325	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPD_2325	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPD_2325	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPD_2326	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
RPD_2327	PWY-1042	glycolysis IV (plant cytosol)
RPD_2327	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RPD_2327	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPD_2327	PWY-5723	Rubisco shunt
RPD_2327	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPD_2327	PWY-6886	1-butanol autotrophic biosynthesis
RPD_2327	PWY-6901	superpathway of glucose and xylose degradation
RPD_2327	PWY-7003	glycerol degradation to butanol
RPD_2327	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RPD_2327	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPD_2433	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPD_2433	PWY-6416	quinate degradation II
RPD_2433	PWY-6707	gallate biosynthesis
RPD_2455	PWY-6823	molybdenum cofactor biosynthesis
RPD_2455	PWY-6891	thiazole biosynthesis II (Bacillus)
RPD_2455	PWY-6892	thiazole biosynthesis I (E. coli)
RPD_2455	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RPD_2459	PWY-6823	molybdenum cofactor biosynthesis
RPD_2459	PWY-6891	thiazole biosynthesis II (Bacillus)
RPD_2459	PWY-6892	thiazole biosynthesis I (E. coli)
RPD_2459	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RPD_2474	PWY-4041	&gamma;-glutamyl cycle
RPD_2474	PWY-5826	hypoglycin biosynthesis
RPD_2488	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPD_2488	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPD_2496	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPD_2498	PWY-7425	2-chloroacrylate degradation I
RPD_2526	PWY-5674	nitrate reduction IV (dissimilatory)
RPD_2534	PWY-4381	fatty acid biosynthesis initiation I
RPD_2534	PWY-5743	3-hydroxypropanoate cycle
RPD_2534	PWY-5744	glyoxylate assimilation
RPD_2534	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPD_2534	PWY-6679	jadomycin biosynthesis
RPD_2534	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPD_2557	PWY-6936	seleno-amino acid biosynthesis
RPD_2584	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RPD_2584	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
RPD_2584	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
RPD_2587	PWY-7560	methylerythritol phosphate pathway II
RPD_2602	PWY-6700	queuosine biosynthesis
RPD_2603	PWY-6700	queuosine biosynthesis
RPD_2617	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RPD_2618	PWY-6749	CMP-legionaminate biosynthesis I
RPD_2630	PWY-6826	phosphatidylcholine biosynthesis VI
RPD_2640	PWY-2941	L-lysine biosynthesis II
RPD_2640	PWY-2942	L-lysine biosynthesis III
RPD_2640	PWY-5097	L-lysine biosynthesis VI
RPD_2649	PWY-6012	acyl carrier protein metabolism I
RPD_2649	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
RPD_2660	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPD_2660	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPD_2671	PWY-1622	formaldehyde assimilation I (serine pathway)
RPD_2671	PWY-181	photorespiration
RPD_2671	PWY-2161	folate polyglutamylation
RPD_2671	PWY-2201	folate transformations I
RPD_2671	PWY-3661	glycine betaine degradation I
RPD_2671	PWY-3661-1	glycine betaine degradation II (mammalian)
RPD_2671	PWY-3841	folate transformations II
RPD_2671	PWY-5497	purine nucleobases degradation II (anaerobic)
RPD_2674	PWY-6167	flavin biosynthesis II (archaea)
RPD_2674	PWY-6168	flavin biosynthesis III (fungi)
RPD_2674	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPD_2675	PWY-6167	flavin biosynthesis II (archaea)
RPD_2675	PWY-6168	flavin biosynthesis III (fungi)
RPD_2677	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RPD_2677	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RPD_2677	PWY-6896	thiamin salvage I
RPD_2677	PWY-6897	thiamin salvage II
RPD_2686	PWY-4381	fatty acid biosynthesis initiation I
RPD_2694	PWY-6655	xanthan biosynthesis
RPD_2694	PWY-6658	acetan biosynthesis
RPD_2703	PWY-5344	L-homocysteine biosynthesis
RPD_2703	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RPD_2714	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RPD_2714	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RPD_2715	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RPD_2715	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPD_2715	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPD_2715	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
RPD_2715	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RPD_2715	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RPD_2723	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
RPD_2746	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
RPD_2746	PWY-581	indole-3-acetate biosynthesis II
RPD_2746	PWY-7308	acrylonitrile degradation I
RPD_2747	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
RPD_2747	PWY-581	indole-3-acetate biosynthesis II
RPD_2747	PWY-7308	acrylonitrile degradation I
RPD_2748	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
RPD_2748	PWY-581	indole-3-acetate biosynthesis II
RPD_2748	PWY-7308	acrylonitrile degradation I
RPD_2751	PWY-6703	preQ<sub>0</sub> biosynthesis
RPD_2784	PWY-5381	pyridine nucleotide cycling (plants)
RPD_2784	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RPD_2784	PWY-6596	adenosine nucleotides degradation I
RPD_2784	PWY-6606	guanosine nucleotides degradation II
RPD_2784	PWY-6607	guanosine nucleotides degradation I
RPD_2784	PWY-6608	guanosine nucleotides degradation III
RPD_2784	PWY-7185	UTP and CTP dephosphorylation I
RPD_2787	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
RPD_2806	PWY-5101	L-isoleucine biosynthesis II
RPD_2806	PWY-5103	L-isoleucine biosynthesis III
RPD_2806	PWY-5104	L-isoleucine biosynthesis IV
RPD_2806	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPD_2807	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
RPD_2807	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RPD_2816	PWY-1042	glycolysis IV (plant cytosol)
RPD_2816	PWY-1622	formaldehyde assimilation I (serine pathway)
RPD_2816	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RPD_2816	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPD_2816	PWY-5723	Rubisco shunt
RPD_2816	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPD_2816	PWY-6886	1-butanol autotrophic biosynthesis
RPD_2816	PWY-6901	superpathway of glucose and xylose degradation
RPD_2816	PWY-7003	glycerol degradation to butanol
RPD_2816	PWY-7124	ethylene biosynthesis V (engineered)
RPD_2816	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RPD_2817	PWY-6700	queuosine biosynthesis
RPD_2820	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RPD_2820	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
RPD_2824	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
RPD_2824	PWY-7177	UTP and CTP dephosphorylation II
RPD_2824	PWY-7185	UTP and CTP dephosphorylation I
RPD_2826	PWY-1042	glycolysis IV (plant cytosol)
RPD_2826	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPD_2826	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPD_2826	PWY-7003	glycerol degradation to butanol
RPD_2838	PWY-6823	molybdenum cofactor biosynthesis
RPD_2841	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPD_2842	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPD_2847	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPD_2847	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPD_2847	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPD_2847	PWY-5994	palmitate biosynthesis I (animals and fungi)
RPD_2847	PWY-6113	superpathway of mycolate biosynthesis
RPD_2847	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPD_2847	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPD_2847	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPD_2847	PWYG-321	mycolate biosynthesis
RPD_2851	PWY-7560	methylerythritol phosphate pathway II
RPD_2869	PWY-5743	3-hydroxypropanoate cycle
RPD_2869	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPD_2869	PWY-6728	methylaspartate cycle
RPD_2869	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPD_2871	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RPD_2871	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
RPD_2873	PWY-3781	aerobic respiration I (cytochrome c)
RPD_2873	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RPD_2873	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RPD_2873	PWY-6692	Fe(II) oxidation
RPD_2874	PWY-3781	aerobic respiration I (cytochrome c)
RPD_2874	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RPD_2874	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RPD_2874	PWY-6692	Fe(II) oxidation
RPD_2897	PWY-5958	acridone alkaloid biosynthesis
RPD_2897	PWY-6543	4-aminobenzoate biosynthesis
RPD_2897	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RPD_2897	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RPD_2897	PWY-6722	candicidin biosynthesis
RPD_2899	PWY-6938	NADH repair
RPD_2901	PWY-381	nitrate reduction II (assimilatory)
RPD_2901	PWY-5675	nitrate reduction V (assimilatory)
RPD_2901	PWY-6549	L-glutamine biosynthesis III
RPD_2901	PWY-6963	ammonia assimilation cycle I
RPD_2901	PWY-6964	ammonia assimilation cycle II
RPD_2905	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPD_2912	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RPD_2912	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPD_2912	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RPD_2912	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RPD_2912	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPD_2912	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPD_2912	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPD_2912	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RPD_2918	PWY-5686	UMP biosynthesis
RPD_2944	PWY-3841	folate transformations II
RPD_2944	PWY-6614	tetrahydrofolate biosynthesis
RPD_2946	PWY-1281	sulfoacetaldehyde degradation I
RPD_2946	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPD_2946	PWY-5482	pyruvate fermentation to acetate II
RPD_2946	PWY-5485	pyruvate fermentation to acetate IV
RPD_2946	PWY-5497	purine nucleobases degradation II (anaerobic)
RPD_2946	PWY-6637	sulfolactate degradation II
RPD_2946	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPD_2954	PWY-5269	cardiolipin biosynthesis II
RPD_2954	PWY-5668	cardiolipin biosynthesis I
RPD_2955	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPD_2955	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPD_2955	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPD_2956	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPD_2956	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
RPD_2961	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RPD_2961	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
RPD_2961	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPD_2961	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPD_2961	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
RPD_2961	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RPD_2961	PWY-7205	CMP phosphorylation
RPD_2961	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RPD_2961	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPD_2961	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RPD_2961	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPD_2961	PWY-7224	purine deoxyribonucleosides salvage
RPD_2961	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPD_2961	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RPD_2965	PWY-5988	wound-induced proteolysis I
RPD_2965	PWY-6018	seed germination protein turnover
RPD_2974	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RPD_2979	PWY-5367	petroselinate biosynthesis
RPD_2979	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPD_2979	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPD_2979	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPD_2979	PWY-5994	palmitate biosynthesis I (animals and fungi)
RPD_2979	PWY-6113	superpathway of mycolate biosynthesis
RPD_2979	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPD_2979	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPD_2979	PWY-6951	RPD_2979
RPD_2979	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
RPD_2979	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPD_2979	PWYG-321	mycolate biosynthesis
RPD_2983	PWY-4381	fatty acid biosynthesis initiation I
RPD_2983	PWY-6799	fatty acid biosynthesis (plant mitochondria)
RPD_2983	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPD_2992	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPD_2997	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPD_2997	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPD_2997	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPD_2997	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RPD_3008	PWY-6654	phosphopantothenate biosynthesis III
RPD_3016	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPD_3019	PWY-723	alkylnitronates degradation
RPD_3020	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
RPD_3020	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
RPD_3026	PWY-6454	vancomycin resistance I
RPD_3026	PWY-6455	vancomycin resistance II
RPD_3027	PWY-5081	L-tryptophan degradation VIII (to tryptophol)
RPD_3028	PWY-5686	UMP biosynthesis
RPD_3029	PWY-5686	UMP biosynthesis
RPD_3083	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RPD_3083	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
RPD_3092	PWY-6339	syringate degradation
RPD_3122	PWY-4381	fatty acid biosynthesis initiation I
RPD_3122	PWY-5743	3-hydroxypropanoate cycle
RPD_3122	PWY-5744	glyoxylate assimilation
RPD_3122	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPD_3122	PWY-6679	jadomycin biosynthesis
RPD_3122	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPD_3163	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPD_3227	PWY-6823	molybdenum cofactor biosynthesis
RPD_3227	PWY-6891	thiazole biosynthesis II (Bacillus)
RPD_3227	PWY-6892	thiazole biosynthesis I (E. coli)
RPD_3227	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RPD_3237	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RPD_3237	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RPD_3237	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
RPD_3248	PWY-5663	tetrahydrobiopterin biosynthesis I
RPD_3248	PWY-5664	tetrahydrobiopterin biosynthesis II
RPD_3248	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RPD_3248	PWY-6703	preQ<sub>0</sub> biosynthesis
RPD_3248	PWY-6983	tetrahydrobiopterin biosynthesis III
RPD_3248	PWY-7442	drosopterin and aurodrosopterin biosynthesis
RPD_3255	PWY-6857	retinol biosynthesis
RPD_3256	PWY-5506	methanol oxidation to formaldehyde IV
RPD_3288	PWY-6936	seleno-amino acid biosynthesis
RPD_3288	PWY-7274	D-cycloserine biosynthesis
RPD_3296	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPD_3302	PWY-5642	2,4-dinitrotoluene degradation
RPD_3302	PWY-6373	acrylate degradation
RPD_3312	PWY-5392	reductive TCA cycle II
RPD_3312	PWY-5537	pyruvate fermentation to acetate V
RPD_3312	PWY-5538	pyruvate fermentation to acetate VI
RPD_3312	PWY-5690	TCA cycle II (plants and fungi)
RPD_3312	PWY-5913	TCA cycle VI (obligate autotrophs)
RPD_3312	PWY-6728	methylaspartate cycle
RPD_3312	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPD_3312	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPD_3324	PWY-5101	L-isoleucine biosynthesis II
RPD_3324	PWY-5103	L-isoleucine biosynthesis III
RPD_3324	PWY-5104	L-isoleucine biosynthesis IV
RPD_3324	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPD_3345	PWY-6834	spermidine biosynthesis III
RPD_3353	PWY-3841	folate transformations II
RPD_3353	PWY-6614	tetrahydrofolate biosynthesis
RPD_3354	PWY-3841	folate transformations II
RPD_3354	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPD_3354	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPD_3354	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RPD_3354	PWY-7199	pyrimidine deoxyribonucleosides salvage
RPD_3354	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RPD_3360	PWY-5392	reductive TCA cycle II
RPD_3360	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPD_3360	PWY-5690	TCA cycle II (plants and fungi)
RPD_3360	PWY-5913	TCA cycle VI (obligate autotrophs)
RPD_3360	PWY-6728	methylaspartate cycle
RPD_3360	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPD_3360	PWY-7254	TCA cycle VII (acetate-producers)
RPD_3360	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPD_3364	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPD_3364	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPD_3389	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPD_3389	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPD_3392	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPD_3392	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPD_3393	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPD_3393	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPD_3394	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RPD_3394	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
RPD_3394	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RPD_3394	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RPD_3396	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPD_3396	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPD_3397	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RPD_3397	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RPD_3397	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RPD_3398	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPD_3398	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPD_3418	PWY-4202	arsenate detoxification I (glutaredoxin)
RPD_3418	PWY-4621	arsenate detoxification II (glutaredoxin)
RPD_3422	PWY-4202	arsenate detoxification I (glutaredoxin)
RPD_3430	PWY-6891	thiazole biosynthesis II (Bacillus)
RPD_3430	PWY-6892	thiazole biosynthesis I (E. coli)
RPD_3431	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RPD_3431	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RPD_3431	PWY-6897	thiamin salvage II
RPD_3431	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RPD_3431	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RPD_3431	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
RPD_3431	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RPD_3432	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
RPD_3457	PWY-5350	thiosulfate disproportionation III (rhodanese)
RPD_3471	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPD_3474	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPD_3474	PWY-3801	sucrose degradation II (sucrose synthase)
RPD_3474	PWY-5054	sorbitol biosynthesis I
RPD_3474	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
RPD_3474	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RPD_3474	PWY-5659	GDP-mannose biosynthesis
RPD_3474	PWY-5723	Rubisco shunt
RPD_3474	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPD_3474	PWY-621	sucrose degradation III (sucrose invertase)
RPD_3474	PWY-622	starch biosynthesis
RPD_3474	PWY-6531	mannitol cycle
RPD_3474	PWY-6981	chitin biosynthesis
RPD_3474	PWY-7238	sucrose biosynthesis II
RPD_3474	PWY-7347	sucrose biosynthesis III
RPD_3474	PWY-7385	1,3-propanediol biosynthesis (engineered)
RPD_3476	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RPD_3477	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RPD_3477	PWY-6855	chitin degradation I (archaea)
RPD_3477	PWY-6906	chitin derivatives degradation
RPD_3478	PWY-5530	sorbitol biosynthesis II
RPD_3478	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPD_3481	PWY-5941	glycogen degradation II (eukaryotic)
RPD_3481	PWY-6724	starch degradation II
RPD_3481	PWY-6737	starch degradation V
RPD_3481	PWY-7238	sucrose biosynthesis II
RPD_3483	PWY-2622	trehalose biosynthesis IV
RPD_3484	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
RPD_3484	PWY-622	starch biosynthesis
RPD_3486	PWY-2661	trehalose biosynthesis V
RPD_3487	PWY-2661	trehalose biosynthesis V
RPD_3494	PWY-5964	guanylyl molybdenum cofactor biosynthesis
RPD_3496	PWY-723	alkylnitronates degradation
RPD_3500	PWY-5704	urea degradation II
RPD_3503	PWY-5704	urea degradation II
RPD_3504	PWY-5704	urea degradation II
RPD_3527	PWY-5988	wound-induced proteolysis I
RPD_3527	PWY-6018	seed germination protein turnover
RPD_3537	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RPD_3537	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
RPD_3538	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
RPD_3540	PWY-2201	folate transformations I
RPD_3540	PWY-3841	folate transformations II
RPD_3541	PWY-2201	folate transformations I
RPD_3541	PWY-3841	folate transformations II
RPD_3544	PWY-4261	glycerol degradation I
RPD_3553	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPD_3553	PWY-5109	2-methylbutanoate biosynthesis
RPD_3553	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RPD_3553	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RPD_3553	PWY-5177	glutaryl-CoA degradation
RPD_3553	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPD_3553	PWY-6435	4-hydroxybenzoate biosynthesis V
RPD_3553	PWY-6583	pyruvate fermentation to butanol I
RPD_3553	PWY-6863	pyruvate fermentation to hexanol
RPD_3553	PWY-6883	pyruvate fermentation to butanol II
RPD_3553	PWY-6944	androstenedione degradation
RPD_3553	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RPD_3553	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RPD_3553	PWY-7007	methyl ketone biosynthesis
RPD_3553	PWY-7046	4-coumarate degradation (anaerobic)
RPD_3553	PWY-7094	fatty acid salvage
RPD_3553	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RPD_3553	PWY-735	jasmonic acid biosynthesis
RPD_3553	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RPD_3566	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
RPD_3566	PWY-7494	choline degradation IV
RPD_3570	PWY-7560	methylerythritol phosphate pathway II
RPD_3573	PWY-6098	diploterol and cycloartenol biosynthesis
RPD_3573	PWY-7072	hopanoid biosynthesis (bacteria)
RPD_3621	PWY-6854	ethylene biosynthesis III (microbes)
RPD_3671	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPD_3707	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
RPD_3707	PWY-6853	ethylene biosynthesis II (microbes)
RPD_3707	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RPD_3718	PWY-5344	L-homocysteine biosynthesis
RPD_3718	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RPD_3721	PWY-5532	adenosine nucleotides degradation IV
RPD_3721	PWY-5723	Rubisco shunt
RPD_3722	PWY-5532	adenosine nucleotides degradation IV
RPD_3722	PWY-5723	Rubisco shunt
RPD_3724	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPD_3724	PWY-7536	2-amino-3-hydroxycyclopent-2-enone biosynthesis
RPD_3732	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPD_3732	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPD_3733	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPD_3733	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPD_3734	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPD_3734	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPD_3735	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPD_3735	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPD_3736	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPD_3736	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPD_3739	PWY-5874	heme degradation
RPD_3739	PWY-5915	phycoerythrobilin biosynthesis I
RPD_3739	PWY-5917	phycocyanobilin biosynthesis
RPD_3739	PWY-7170	phytochromobilin biosynthesis
RPD_3749	PWY-101	photosynthesis light reactions
RPD_3749	PWY-6785	hydrogen production VIII
RPD_3750	PWY-101	photosynthesis light reactions
RPD_3750	PWY-6785	hydrogen production VIII
RPD_3754	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
RPD_3754	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPD_3754	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPD_3755	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
RPD_3755	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPD_3755	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPD_3756	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
RPD_3764	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPD_3764	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPD_3767	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPD_3767	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPD_3769	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPD_3769	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPD_3770	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPD_3770	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPD_3771	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPD_3771	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPD_3772	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPD_3772	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPD_3793	PWY-2723	trehalose degradation V
RPD_3793	PWY-3801	sucrose degradation II (sucrose synthase)
RPD_3793	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
RPD_3793	PWY-5661	GDP-glucose biosynthesis
RPD_3793	PWY-5661-1	RPD_3793
RPD_3793	PWY-5940	streptomycin biosynthesis
RPD_3793	PWY-5941	glycogen degradation II (eukaryotic)
RPD_3793	PWY-622	starch biosynthesis
RPD_3793	PWY-6731	starch degradation III
RPD_3793	PWY-6737	starch degradation V
RPD_3793	PWY-6749	CMP-legionaminate biosynthesis I
RPD_3793	PWY-7238	sucrose biosynthesis II
RPD_3793	PWY-7343	UDP-glucose biosynthesis
RPD_3802	PWY-5169	cyanurate degradation
RPD_3802	PWY-5703	urea degradation I
RPD_3802	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPD_3804	PWY-5101	L-isoleucine biosynthesis II
RPD_3804	PWY-5103	L-isoleucine biosynthesis III
RPD_3804	PWY-5104	L-isoleucine biosynthesis IV
RPD_3804	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPD_3817	PWY-5532	adenosine nucleotides degradation IV
RPD_3818	PWY-7399	methylphosphonate degradation II
RPD_3825	PWY-7399	methylphosphonate degradation II
RPD_3828	PWY-7399	methylphosphonate degradation II
RPD_3830	PWY-7399	methylphosphonate degradation II
RPD_3831	PWY-7399	methylphosphonate degradation II
RPD_3832	PWY-5532	adenosine nucleotides degradation IV
RPD_3833	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RPD_3833	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RPD_3848	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPD_3848	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPD_3857	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPD_3857	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPD_3857	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPD_3880	PWY-6167	flavin biosynthesis II (archaea)
RPD_3880	PWY-6168	flavin biosynthesis III (fungi)
RPD_3882	PWY-3341	L-proline biosynthesis III
RPD_3882	PWY-4981	L-proline biosynthesis II (from arginine)
RPD_3882	PWY-6344	L-ornithine degradation II (Stickland reaction)
RPD_3886	PWY-5057	L-valine degradation II
RPD_3886	PWY-5076	L-leucine degradation III
RPD_3886	PWY-5078	L-isoleucine degradation II
RPD_3886	PWY-5101	L-isoleucine biosynthesis II
RPD_3886	PWY-5103	L-isoleucine biosynthesis III
RPD_3886	PWY-5104	L-isoleucine biosynthesis IV
RPD_3886	PWY-5108	L-isoleucine biosynthesis V
RPD_3894	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPD_3914	PWY-6749	CMP-legionaminate biosynthesis I
RPD_3919	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPD_3969	PWY-4381	fatty acid biosynthesis initiation I
RPD_3986	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPD_3986	PWY-5686	UMP biosynthesis
RPD_3986	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPD_4008	PWY-1341	phenylacetate degradation II (anaerobic)
RPD_4008	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
RPD_4029	PWY-702	L-methionine biosynthesis II
RPD_4030	PWY-7560	methylerythritol phosphate pathway II
RPD_4040	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
RPD_4040	PWY-6167	flavin biosynthesis II (archaea)
RPD_4040	PWY-6168	flavin biosynthesis III (fungi)
RPD_4053	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPD_4069	PWY-4261	glycerol degradation I
RPD_4069	PWY-6118	glycerol-3-phosphate shuttle
RPD_4069	PWY-6952	glycerophosphodiester degradation
RPD_4078	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RPD_4079	PWY-4041	&gamma;-glutamyl cycle
RPD_4079	PWY-5826	hypoglycin biosynthesis
RPD_4099	PWY-5344	L-homocysteine biosynthesis
RPD_4100	PWY-3461	L-tyrosine biosynthesis II
RPD_4100	PWY-3462	L-phenylalanine biosynthesis II
RPD_4100	PWY-6120	L-tyrosine biosynthesis III
RPD_4100	PWY-6627	salinosporamide A biosynthesis
RPD_4104	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPD_4104	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPD_4104	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPD_4136	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPD_4136	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPD_4137	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPD_4137	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPD_4186	PWY-6825	phosphatidylcholine biosynthesis V
RPD_4204	PWY-3781	aerobic respiration I (cytochrome c)
RPD_4204	PWY-6692	Fe(II) oxidation
RPD_4204	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
RPD_4204	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPD_4212	PWY-6605	adenine and adenosine salvage II
RPD_4212	PWY-6610	adenine and adenosine salvage IV
RPD_4213	PWY-5958	acridone alkaloid biosynthesis
RPD_4213	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RPD_4213	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RPD_4239	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RPD_4247	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
RPD_4248	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
RPD_4281	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPD_4281	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPD_4286	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPD_4294	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPD_4305	PWY-6891	thiazole biosynthesis II (Bacillus)
RPD_4305	PWY-6892	thiazole biosynthesis I (E. coli)
RPD_4305	PWY-7560	methylerythritol phosphate pathway II
RPD_4312	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPD_4312	PWY-5723	Rubisco shunt
RPD_4312	PWY-6891	thiazole biosynthesis II (Bacillus)
RPD_4312	PWY-6892	thiazole biosynthesis I (E. coli)
RPD_4312	PWY-6901	superpathway of glucose and xylose degradation
RPD_4312	PWY-7560	methylerythritol phosphate pathway II
RPD_4313	PWY-1042	glycolysis IV (plant cytosol)
RPD_4313	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPD_4313	PWY-6901	superpathway of glucose and xylose degradation
RPD_4313	PWY-7003	glycerol degradation to butanol
RPD_4314	PWY-1042	glycolysis IV (plant cytosol)
RPD_4314	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPD_4314	PWY-6886	1-butanol autotrophic biosynthesis
RPD_4314	PWY-6901	superpathway of glucose and xylose degradation
RPD_4314	PWY-7003	glycerol degradation to butanol
RPD_4317	PWY-1042	glycolysis IV (plant cytosol)
RPD_4317	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPD_4317	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPD_4317	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPD_4317	PWY-7385	1,3-propanediol biosynthesis (engineered)
RPD_4318	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RPD_4318	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RPD_4318	PWY-6897	thiamin salvage II
RPD_4318	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RPD_4318	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RPD_4318	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
RPD_4318	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RPD_4320	PWY-2301	<i>myo</i>-inositol biosynthesis
RPD_4320	PWY-4702	phytate degradation I
RPD_4320	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
RPD_4352	PWY-6785	hydrogen production VIII
RPD_4407	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
RPD_4407	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II