RPD_0001	SSF48295	TrpR-like
RPD_0001	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0002	SSF55979	DNA clamp
RPD_0003	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0004	SSF54211	Ribosomal protein S5 domain 2-like
RPD_0004	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_0004	SSF56719	Type II DNA topoisomerase
RPD_0010	SSF143081	BB1717-like
RPD_0012	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0012	SSF56024	Phospholipase D/nuclease
RPD_0013	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_0018	SSF56300	Metallo-dependent phosphatases
RPD_0020	SSF140990	FtsH protease domain-like
RPD_0020	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0025	SSF53098	Ribonuclease H-like
RPD_0026	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0034	SSF102712	JAB1/MPN domain
RPD_0035	SSF69572	Activating enzymes of the ubiquitin-like proteins
RPD_0036	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0036	SSF52980	Restriction endonuclease-like
RPD_0037	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0040	SSF53901	Thiolase-like
RPD_0041	SSF48264	Cytochrome P450
RPD_0042	SSF56801	Acetyl-CoA synthetase-like
RPD_0043	SSF46689	Homeodomain-like
RPD_0043	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPD_0044	SSF141571	Pentapeptide repeat-like
RPD_0045	SSF52096	ClpP/crotonase
RPD_0046	SSF46785	"Winged helix" DNA-binding domain
RPD_0046	SSF48008	GntR ligand-binding domain-like
RPD_0047	SSF56801	Acetyl-CoA synthetase-like
RPD_0048	SSF53822	Periplasmic binding protein-like I
RPD_0049	SSF53720	ALDH-like
RPD_0050	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0051	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0054	SSF52096	ClpP/crotonase
RPD_0058	SSF158682	TerB-like
RPD_0060	SSF46785	"Winged helix" DNA-binding domain
RPD_0061	SSF64005	Undecaprenyl diphosphate synthase
RPD_0062	SSF102114	Radical SAM enzymes
RPD_0064	SSF46689	Homeodomain-like
RPD_0065	SSF158472	HAMP domain-like
RPD_0065	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPD_0066	SSF141868	EAL domain-like
RPD_0066	SSF55073	Nucleotide cyclase
RPD_0066	SSF55781	GAF domain-like
RPD_0066	SSF55785	PYP-like sensor domain (PAS domain)
RPD_0067	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_0068	SSF54211	Ribosomal protein S5 domain 2-like
RPD_0070	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0072	SSF53633	Carbamate kinase-like
RPD_0073	SSF47090	PGBD-like
RPD_0074	SSF56784	HAD-like
RPD_0075	SSF51161	Trimeric LpxA-like enzymes
RPD_0077	SSF53187	Zn-dependent exopeptidases
RPD_0077	SSF55031	Bacterial exopeptidase dimerisation domain
RPD_0079	SSF55120	Pseudouridine synthase
RPD_0080	SSF50486	FMT C-terminal domain-like
RPD_0080	SSF53328	Formyltransferase
RPD_0081	SSF56420	Peptide deformylase
RPD_0083	SSF103473	MFS general substrate transporter
RPD_0085	SSF111304	Recombination protein RecR
RPD_0086	SSF82607	YbaB-like
RPD_0087	SSF48019	post-AAA+ oligomerization domain-like
RPD_0087	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0088	SSF54197	HIT-like
RPD_0089	SSF55811	Nudix
RPD_0090	SSF53613	Ribokinase-like
RPD_0091	SSF50475	FMN-binding split barrel
RPD_0092	SSF51182	RmlC-like cupins
RPD_0093	SSF56281	Metallo-hydrolase/oxidoreductase
RPD_0094	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_0096	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_0097	SSF75620	Release factor
RPD_0098	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
RPD_0098	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPD_0098	SSF52009	Phosphohistidine domain
RPD_0098	SSF55781	GAF domain-like
RPD_0099	SSF53633	Carbamate kinase-like
RPD_0099	SSF55021	ACT-like
RPD_0100	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_0101	SSF56281	Metallo-hydrolase/oxidoreductase
RPD_0102	SSF103481	Multidrug resistance efflux transporter EmrE
RPD_0103	SSF103481	Multidrug resistance efflux transporter EmrE
RPD_0105	SSF56317	Carbon-nitrogen hydrolase
RPD_0106	SSF52833	Thioredoxin-like
RPD_0107	SSF53271	PRTase-like
RPD_0109	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_0110	SSF55811	Nudix
RPD_0111	SSF56266	DmpA/ArgJ-like
RPD_0112	SSF82784	OsmC-like
RPD_0113	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0114	SSF161098	MetI-like
RPD_0115	SSF53850	Periplasmic binding protein-like II
RPD_0116	SSF55021	ACT-like
RPD_0116	SSF81301	Nucleotidyltransferase
RPD_0116	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
RPD_0116	SSF81891	Poly A polymerase C-terminal region-like
RPD_0118	SSF55781	GAF domain-like
RPD_0119	SSF103190	Sensory domain-like
RPD_0119	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_0119	SSF52172	CheY-like
RPD_0119	SSF55785	PYP-like sensor domain (PAS domain)
RPD_0119	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_0120	SSF54909	Dimeric alpha+beta barrel
RPD_0121	SSF53822	Periplasmic binding protein-like I
RPD_0124	SSF53955	Lysozyme-like
RPD_0124	SSF56601	beta-lactamase/transpeptidase-like
RPD_0126	SSF53474	alpha/beta-Hydrolases
RPD_0127	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_0129	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0130	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_0130	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_0131	SSF52172	CheY-like
RPD_0133	SSF53300	vWA-like
RPD_0134	SSF56281	Metallo-hydrolase/oxidoreductase
RPD_0135	SSF46689	Homeodomain-like
RPD_0137	SSF53474	alpha/beta-Hydrolases
RPD_0146	SSF103378	2-methylcitrate dehydratase PrpD
RPD_0147	SSF55785	PYP-like sensor domain (PAS domain)
RPD_0149	SSF51182	RmlC-like cupins
RPD_0150	SSF56104	SAICAR synthase-like
RPD_0151	SSF52096	ClpP/crotonase
RPD_0152	SSF102712	JAB1/MPN domain
RPD_0152	SSF47781	RuvA domain 2-like
RPD_0153	SSF158472	HAMP domain-like
RPD_0153	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPD_0154	SSF100939	SPOC domain-like
RPD_0155	SSF55920	Creatinase/aminopeptidase
RPD_0156	SSF50182	Sm-like ribonucleoproteins
RPD_0156	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
RPD_0156	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
RPD_0157	SSF56176	FAD-binding/transporter-associated domain-like
RPD_0158	SSF55166	Hedgehog/DD-peptidase
RPD_0159	SSF141868	EAL domain-like
RPD_0159	SSF55073	Nucleotide cyclase
RPD_0159	SSF55785	PYP-like sensor domain (PAS domain)
RPD_0160	SSF54001	Cysteine proteinases
RPD_0161	SSF51905	FAD/NAD(P)-binding domain
RPD_0161	SSF54373	FAD-linked reductases, C-terminal domain
RPD_0162	SSF46955	Putative DNA-binding domain
RPD_0162	SSF50249	Nucleic acid-binding proteins
RPD_0162	SSF54991	Anticodon-binding domain of PheRS
RPD_0162	SSF55681	Class II aaRS and biotin synthetases
RPD_0162	SSF56037	PheT/TilS domain
RPD_0163	SSF52980	Restriction endonuclease-like
RPD_0164	SSF46589	tRNA-binding arm
RPD_0164	SSF55681	Class II aaRS and biotin synthetases
RPD_0165	SSF74731	Ribosomal protein L20
RPD_0166	SSF143034	L35p-like
RPD_0168	SSF54364	Translation initiation factor IF3, N-terminal domain
RPD_0168	SSF55200	Translation initiation factor IF3, C-terminal domain
RPD_0169	SSF53474	alpha/beta-Hydrolases
RPD_0170	SSF46548	alpha-helical ferredoxin
RPD_0170	SSF48371	ARM repeat
RPD_0171	SSF47616	GST C-terminal domain-like
RPD_0171	SSF52833	Thioredoxin-like
RPD_0173	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0174	SSF53098	Ribonuclease H-like
RPD_0177	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0179	SSF69754	Ribosome binding protein Y (YfiA homologue)
RPD_0180	SSF55804	Phoshotransferase/anion transport protein
RPD_0182	SSF49764	HSP20-like chaperones
RPD_0183	SSF50331	MOP-like
RPD_0183	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0184	SSF161098	MetI-like
RPD_0185	SSF161098	MetI-like
RPD_0186	SSF53850	Periplasmic binding protein-like II
RPD_0187	SSF89796	CoA-transferase family III (CaiB/BaiF)
RPD_0189	SSF55205	EPT/RTPC-like
RPD_0190	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
RPD_0191	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0192	SSF50249	Nucleic acid-binding proteins
RPD_0193	SSF52096	ClpP/crotonase
RPD_0194	SSF47729	IHF-like DNA-binding proteins
RPD_0196	SSF51366	Ribulose-phoshate binding barrel
RPD_0197	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPD_0198	SSF51366	Ribulose-phoshate binding barrel
RPD_0199	SSF52096	ClpP/crotonase
RPD_0200	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPD_0200	SSF53623	MurD-like peptide ligases, catalytic domain
RPD_0201	SSF52833	Thioredoxin-like
RPD_0202	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0202	SSF52980	Restriction endonuclease-like
RPD_0203	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0204	SSF53448	Nucleotide-diphospho-sugar transferases
RPD_0205	SSF141371	PilZ domain-like
RPD_0206	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0206	SSF56112	Protein kinase-like (PK-like)
RPD_0207	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_0207	SSF55785	PYP-like sensor domain (PAS domain)
RPD_0207	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_0208	SSF51283	dUTPase-like
RPD_0209	SSF102645	CoaB-like
RPD_0209	SSF47598	Ribbon-helix-helix
RPD_0209	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
RPD_0210	SSF56112	Protein kinase-like (PK-like)
RPD_0211	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_0212	SSF46946	S13-like H2TH domain
RPD_0212	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RPD_0212	SSF81624	N-terminal domain of MutM-like DNA repair proteins
RPD_0214	SSF47090	PGBD-like
RPD_0214	SSF50494	Trypsin-like serine proteases
RPD_0215	SSF69572	Activating enzymes of the ubiquitin-like proteins
RPD_0217	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0217	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RPD_0219	SSF46785	"Winged helix" DNA-binding domain
RPD_0220	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_0221	SSF53901	Thiolase-like
RPD_0222	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0223	SSF48113	Heme-dependent peroxidases
RPD_0224	SSF46785	"Winged helix" DNA-binding domain
RPD_0224	SSF53850	Periplasmic binding protein-like II
RPD_0225	SSF55785	PYP-like sensor domain (PAS domain)
RPD_0225	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPD_0226	SSF55785	PYP-like sensor domain (PAS domain)
RPD_0226	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPD_0227	SSF46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
RPD_0227	SSF50249	Nucleic acid-binding proteins
RPD_0227	SSF54211	Ribosomal protein S5 domain 2-like
RPD_0227	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
RPD_0227	SSF55666	Ribonuclease PH domain 2-like
RPD_0228	SSF47060	S15/NS1 RNA-binding domain
RPD_0229	SSF55120	Pseudouridine synthase
RPD_0230	SSF89919	Ribosome-binding factor A, RbfA
RPD_0231	SSF50447	Translation proteins
RPD_0231	SSF52156	Initiation factor IF2/eIF5b, domain 3
RPD_0231	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0232	SSF55315	L30e-like
RPD_0232	SSF64376	YlxR-like
RPD_0233	SSF47794	Rad51 N-terminal domain-like
RPD_0233	SSF50249	Nucleic acid-binding proteins
RPD_0233	SSF54814	Prokaryotic type KH domain (KH-domain type II)
RPD_0233	SSF69705	Transcription factor NusA, N-terminal domain
RPD_0234	SSF74942	YhbC-like, C-terminal domain
RPD_0234	SSF75420	YhbC-like, N-terminal domain
RPD_0236	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_0237	SSF47413	lambda repressor-like DNA-binding domains
RPD_0238	SSF56317	Carbon-nitrogen hydrolase
RPD_0239	SSF54631	CBS-domain pair
RPD_0239	SSF56176	FAD-binding/transporter-associated domain-like
RPD_0240	SSF55486	Metalloproteases ("zincins"), catalytic domain
RPD_0241	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0241	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
RPD_0242	SSF102114	Radical SAM enzymes
RPD_0243	SSF56784	HAD-like
RPD_0244	SSF46785	"Winged helix" DNA-binding domain
RPD_0245	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_0246	SSF53067	Actin-like ATPase domain
RPD_0247	SSF110836	Hypothetical protein SAV1430
RPD_0247	SSF117916	Fe-S cluster assembly (FSCA) domain-like
RPD_0248	SSF52402	Adenine nucleotide alpha hydrolases-like
RPD_0249	SSF52374	Nucleotidylyl transferase
RPD_0251	SSF53613	Ribokinase-like
RPD_0252	SSF56801	Acetyl-CoA synthetase-like
RPD_0253	SSF56601	beta-lactamase/transpeptidase-like
RPD_0255	SSF53720	ALDH-like
RPD_0256	SSF50882	beta-Barrel protease inhibitors
RPD_0257	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0257	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RPD_0258	SSF161098	MetI-like
RPD_0259	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0260	SSF53850	Periplasmic binding protein-like II
RPD_0261	SSF102215	Creatininase
RPD_0262	SSF51395	FMN-linked oxidoreductases
RPD_0263	SSF56059	Glutathione synthetase ATP-binding domain-like
RPD_0264	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPD_0264	SSF53623	MurD-like peptide ligases, catalytic domain
RPD_0265	SSF50129	GroES-like
RPD_0265	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0267	SSF140804	YidB-like
RPD_0269	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0270	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_0270	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_0271	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_0272	SSF52096	ClpP/crotonase
RPD_0273	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPD_0274	SSF52096	ClpP/crotonase
RPD_0275	SSF53822	Periplasmic binding protein-like I
RPD_0276	SSF50199	Staphylococcal nuclease
RPD_0278	SSF141259	CarD-like
RPD_0279	SSF54862	4Fe-4S ferredoxins
RPD_0280	SSF55174	Alpha-L RNA-binding motif
RPD_0281	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0283	SSF143800	L28p-like
RPD_0284	SSF103190	Sensory domain-like
RPD_0284	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_0284	SSF52172	CheY-like
RPD_0284	SSF55785	PYP-like sensor domain (PAS domain)
RPD_0284	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_0285	SSF50956	Thermostable phytase (3-phytase)
RPD_0286	SSF53300	vWA-like
RPD_0287	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0290	SSF46565	Chaperone J-domain
RPD_0291	SSF82657	BolA-like
RPD_0292	SSF54631	CBS-domain pair
RPD_0292	SSF56176	FAD-binding/transporter-associated domain-like
RPD_0293	SSF56796	Dehydroquinate synthase-like
RPD_0294	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0296	SSF56349	DNA breaking-rejoining enzymes
RPD_0297	SSF52096	ClpP/crotonase
RPD_0298	SSF141523	L,D-transpeptidase catalytic domain-like
RPD_0299	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0299	SSF81767	Pre-protein crosslinking domain of SecA
RPD_0299	SSF81886	Helical scaffold and wing domains of SecA
RPD_0300	SSF109998	Triger factor/SurA peptide-binding domain-like
RPD_0300	SSF54534	FKBP-like
RPD_0302	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0303	SSF50630	Acid proteases
RPD_0304	SSF103481	Multidrug resistance efflux transporter EmrE
RPD_0305	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0306	SSF53901	Thiolase-like
RPD_0308	SSF141868	EAL domain-like
RPD_0308	SSF55073	Nucleotide cyclase
RPD_0311	SSF57829	Zn-binding ribosomal proteins
RPD_0312	SSF53955	Lysozyme-like
RPD_0313	SSF48576	Terpenoid synthases
RPD_0316	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
RPD_0316	SSF63380	Riboflavin synthase domain-like
RPD_0318	SSF103481	Multidrug resistance efflux transporter EmrE
RPD_0319	SSF46785	"Winged helix" DNA-binding domain
RPD_0320	SSF53901	Thiolase-like
RPD_0321	SSF48334	DNA repair protein MutS, domain III
RPD_0321	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0321	SSF53150	DNA repair protein MutS, domain II
RPD_0321	SSF55271	DNA repair protein MutS, domain I
RPD_0322	SSF100950	NagB/RpiA/CoA transferase-like
RPD_0324	SSF46785	"Winged helix" DNA-binding domain
RPD_0325	SSF53474	alpha/beta-Hydrolases
RPD_0326	SSF158442	DsbB-like
RPD_0327	SSF55781	GAF domain-like
RPD_0327	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_0328	SSF52172	CheY-like
RPD_0329	SSF50346	PRC-barrel domain
RPD_0335	SSF53474	alpha/beta-Hydrolases
RPD_0336	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPD_0337	SSF158472	HAMP domain-like
RPD_0337	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPD_0339	SSF51182	RmlC-like cupins
RPD_0340	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPD_0340	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPD_0343	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPD_0344	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPD_0345	SSF51161	Trimeric LpxA-like enzymes
RPD_0345	SSF53448	Nucleotide-diphospho-sugar transferases
RPD_0346	SSF50692	ADC-like
RPD_0346	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
RPD_0347	SSF53613	Ribokinase-like
RPD_0348	SSF52402	Adenine nucleotide alpha hydrolases-like
RPD_0349	SSF140376	ChaB-like
RPD_0350	SSF51230	Single hybrid motif
RPD_0350	SSF51246	Rudiment single hybrid motif
RPD_0350	SSF52440	PreATP-grasp domain
RPD_0350	SSF56059	Glutathione synthetase ATP-binding domain-like
RPD_0351	SSF52096	ClpP/crotonase
RPD_0352	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0353	SSF56801	Acetyl-CoA synthetase-like
RPD_0354	SSF52096	ClpP/crotonase
RPD_0355	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0356	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_0356	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_0357	SSF53822	Periplasmic binding protein-like I
RPD_0358	SSF46689	Homeodomain-like
RPD_0359	SSF55120	Pseudouridine synthase
RPD_0359	SSF55174	Alpha-L RNA-binding motif
RPD_0360	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPD_0360	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPD_0362	SSF56281	Metallo-hydrolase/oxidoreductase
RPD_0363	SSF46785	"Winged helix" DNA-binding domain
RPD_0365	SSF53795	PEP carboxykinase-like
RPD_0365	SSF68923	PEP carboxykinase N-terminal domain
RPD_0366	SSF50475	FMN-binding split barrel
RPD_0367	SSF52172	CheY-like
RPD_0368	SSF158472	HAMP domain-like
RPD_0368	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_0368	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_0369	SSF53795	PEP carboxykinase-like
RPD_0370	SSF53062	PTS system fructose IIA component-like
RPD_0371	SSF55594	HPr-like
RPD_0373	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0373	SSF54980	EF-G C-terminal domain-like
RPD_0376	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
RPD_0379	SSF53474	alpha/beta-Hydrolases
RPD_0380	SSF53474	alpha/beta-Hydrolases
RPD_0381	SSF48150	DNA-glycosylase
RPD_0383	SSF46689	Homeodomain-like
RPD_0383	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
RPD_0383	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
RPD_0384	SSF53649	Alkaline phosphatase-like
RPD_0384	SSF64158	2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
RPD_0385	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0385	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPD_0386	SSF54909	Dimeric alpha+beta barrel
RPD_0387	SSF51366	Ribulose-phoshate binding barrel
RPD_0388	SSF52218	Flavoproteins
RPD_0389	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_0390	SSF46565	Chaperone J-domain
RPD_0390	SSF49493	HSP40/DnaJ peptide-binding domain
RPD_0390	SSF57938	DnaJ/Hsp40 cysteine-rich domain
RPD_0391	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
RPD_0391	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
RPD_0391	SSF53067	Actin-like ATPase domain
RPD_0393	SSF51064	Head domain of nucleotide exchange factor GrpE
RPD_0393	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
RPD_0394	SSF46785	"Winged helix" DNA-binding domain
RPD_0394	SSF55781	GAF domain-like
RPD_0395	SSF54211	Ribosomal protein S5 domain 2-like
RPD_0395	SSF55666	Ribonuclease PH domain 2-like
RPD_0396	SSF52972	ITPase-like
RPD_0397	SSF102114	Radical SAM enzymes
RPD_0398	SSF53822	Periplasmic binding protein-like I
RPD_0399	SSF53790	Tetrapyrrole methylase
RPD_0400	SSF52980	Restriction endonuclease-like
RPD_0401	SSF52440	PreATP-grasp domain
RPD_0401	SSF56059	Glutathione synthetase ATP-binding domain-like
RPD_0402	SSF46894	C-terminal effector domain of the bipartite response regulators
RPD_0402	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
RPD_0403	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_0405	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0405	SSF54211	Ribosomal protein S5 domain 2-like
RPD_0407	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_0407	SSF52172	CheY-like
RPD_0407	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_0408	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_0409	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0410	SSF101386	all-alpha NTP pyrophosphatases
RPD_0411	SSF51366	Ribulose-phoshate binding barrel
RPD_0412	SSF51366	Ribulose-phoshate binding barrel
RPD_0413	SSF52317	Class I glutamine amidotransferase-like
RPD_0415	SSF54211	Ribosomal protein S5 domain 2-like
RPD_0416	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPD_0417	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_0418	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0419	SSF160443	SMR domain-like
RPD_0420	SSF50685	Barwin-like endoglucanases
RPD_0421	SSF54427	NTF2-like
RPD_0422	SSF54611	SecB-like
RPD_0423	SSF53098	Ribonuclease H-like
RPD_0424	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0425	SSF52972	ITPase-like
RPD_0428	SSF50249	Nucleic acid-binding proteins
RPD_0428	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0428	SSF68912	Rho N-terminal domain-like
RPD_0429	SSF116878	TrmE connector domain
RPD_0429	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0430	SSF51905	FAD/NAD(P)-binding domain
RPD_0431	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_0432	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0433	SSF110849	ParB/Sulfiredoxin
RPD_0434	SSF48019	post-AAA+ oligomerization domain-like
RPD_0434	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0436	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPD_0436	SSF50677	ValRS/IleRS/LeuRS editing domain
RPD_0436	SSF52374	Nucleotidylyl transferase
RPD_0437	SSF158472	HAMP domain-like
RPD_0437	SSF55073	Nucleotide cyclase
RPD_0438	SSF51419	PLP-binding barrel
RPD_0439	SSF141523	L,D-transpeptidase catalytic domain-like
RPD_0440	SSF46894	C-terminal effector domain of the bipartite response regulators
RPD_0440	SSF52172	CheY-like
RPD_0441	SSF51206	cAMP-binding domain-like
RPD_0442	SSF56219	DNase I-like
RPD_0443	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
RPD_0444	SSF46785	"Winged helix" DNA-binding domain
RPD_0444	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0445	SSF53383	PLP-dependent transferases
RPD_0446	SSF89447	AbrB/MazE/MraZ-like
RPD_0447	SSF88723	PIN domain-like
RPD_0448	SSF111352	Ammonium transporter
RPD_0449	SSF54913	GlnB-like
RPD_0451	SSF54913	GlnB-like
RPD_0452	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_0453	SSF51905	FAD/NAD(P)-binding domain
RPD_0454	SSF158997	Trm112p-like
RPD_0455	SSF88697	PUA domain-like
RPD_0456	SSF48452	TPR-like
RPD_0456	SSF52833	Thioredoxin-like
RPD_0457	SSF46785	"Winged helix" DNA-binding domain
RPD_0457	SSF53850	Periplasmic binding protein-like II
RPD_0459	SSF158472	HAMP domain-like
RPD_0461	SSF51197	Clavaminate synthase-like
RPD_0462	SSF51649	RuBisCo, C-terminal domain
RPD_0462	SSF54966	RuBisCO, large subunit, small (N-terminal) domain
RPD_0463	SSF111038	YjbQ-like
RPD_0464	SSF52266	SGNH hydrolase
RPD_0467	SSF48452	TPR-like
RPD_0469	SSF69618	HemD-like
RPD_0470	SSF53067	Actin-like ATPase domain
RPD_0471	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPD_0471	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0472	SSF88697	PUA domain-like
RPD_0473	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_0474	SSF56801	Acetyl-CoA synthetase-like
RPD_0475	SSF141523	L,D-transpeptidase catalytic domain-like
RPD_0476	SSF103088	OmpA-like
RPD_0477	SSF50475	FMN-binding split barrel
RPD_0478	SSF46548	alpha-helical ferredoxin
RPD_0478	SSF54292	2Fe-2S ferredoxin-like
RPD_0479	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
RPD_0479	SSF51905	FAD/NAD(P)-binding domain
RPD_0479	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
RPD_0480	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
RPD_0481	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
RPD_0482	SSF160240	Cation efflux protein cytoplasmic domain-like
RPD_0482	SSF161111	Cation efflux protein transmembrane domain-like
RPD_0483	SSF56801	Acetyl-CoA synthetase-like
RPD_0484	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0485	SSF82153	FAS1 domain
RPD_0486	SSF81342	Transmembrane di-heme cytochromes
RPD_0487	SSF56524	Oxidoreductase molybdopterin-binding domain
RPD_0488	SSF49329	Cu,Zn superoxide dismutase-like
RPD_0489	SSF103473	MFS general substrate transporter
RPD_0490	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPD_0493	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0493	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPD_0495	SSF53056	beta-carbonic anhydrase, cab
RPD_0496	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPD_0497	SSF158472	HAMP domain-like
RPD_0497	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPD_0498	SSF52016	LeuD/IlvD-like
RPD_0499	SSF55486	Metalloproteases ("zincins"), catalytic domain
RPD_0504	SSF53732	Aconitase iron-sulfur domain
RPD_0506	SSF50104	Translation proteins SH3-like domain
RPD_0507	SSF75217	alpha/beta knot
RPD_0508	SSF50346	PRC-barrel domain
RPD_0508	SSF50447	Translation proteins
RPD_0509	SSF54565	Ribosomal protein S16
RPD_0510	SSF47446	Signal peptide-binding domain
RPD_0510	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0511	SSF56281	Metallo-hydrolase/oxidoreductase
RPD_0513	SSF55136	Probable bacterial effector-binding domain
RPD_0514	SSF54506	Diaminopimelate epimerase-like
RPD_0515	SSF102114	Radical SAM enzymes
RPD_0516	SSF55120	Pseudouridine synthase
RPD_0517	SSF47364	Domain of the SRP/SRP receptor G-proteins
RPD_0517	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0519	SSF47781	RuvA domain 2-like
RPD_0520	SSF52833	Thioredoxin-like
RPD_0524	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0525	SSF52016	LeuD/IlvD-like
RPD_0525	SSF53732	Aconitase iron-sulfur domain
RPD_0526	SSF52833	Thioredoxin-like
RPD_0528	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_0531	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0532	SSF52266	SGNH hydrolase
RPD_0533	SSF55144	LigT-like
RPD_0534	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0535	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0535	SSF56327	LDH C-terminal domain-like
RPD_0536	SSF52210	Succinyl-CoA synthetase domains
RPD_0536	SSF56059	Glutathione synthetase ATP-binding domain-like
RPD_0537	SSF47598	Ribbon-helix-helix
RPD_0538	SSF88723	PIN domain-like
RPD_0539	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0539	SSF52210	Succinyl-CoA synthetase domains
RPD_0540	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_0542	SSF46785	"Winged helix" DNA-binding domain
RPD_0543	SSF103481	Multidrug resistance efflux transporter EmrE
RPD_0544	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPD_0545	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
RPD_0545	SSF51230	Single hybrid motif
RPD_0545	SSF52777	CoA-dependent acyltransferases
RPD_0546	SSF161084	MAPEG domain-like
RPD_0547	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0549	SSF143880	NE0471 N-terminal domain-like
RPD_0550	SSF51905	FAD/NAD(P)-binding domain
RPD_0550	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RPD_0553	SSF47823	lambda integrase-like, N-terminal domain
RPD_0553	SSF56349	DNA breaking-rejoining enzymes
RPD_0554	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0555	SSF50685	Barwin-like endoglucanases
RPD_0556	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
RPD_0557	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
RPD_0557	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
RPD_0557	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0558	SSF52943	ATP synthase (F1-ATPase), gamma subunit
RPD_0559	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
RPD_0559	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
RPD_0559	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0560	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
RPD_0561	SSF55811	Nudix
RPD_0562	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0564	SSF55811	Nudix
RPD_0565	SSF88713	Glycoside hydrolase/deacetylase
RPD_0566	SSF50156	PDZ domain-like
RPD_0566	SSF52096	ClpP/crotonase
RPD_0567	SSF51261	Duplicated hybrid motif
RPD_0568	SSF75217	alpha/beta knot
RPD_0569	SSF81301	Nucleotidyltransferase
RPD_0570	SSF52374	Nucleotidylyl transferase
RPD_0571	SSF53720	ALDH-like
RPD_0574	SSF53633	Carbamate kinase-like
RPD_0574	SSF88697	PUA domain-like
RPD_0575	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_0575	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_0576	SSF102588	LmbE-like
RPD_0577	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_0578	SSF53448	Nucleotide-diphospho-sugar transferases
RPD_0579	SSF56219	DNase I-like
RPD_0580	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_0581	SSF56801	Acetyl-CoA synthetase-like
RPD_0582	SSF53822	Periplasmic binding protein-like I
RPD_0583	SSF46689	Homeodomain-like
RPD_0584	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0584	SSF82051	Obg GTP-binding protein N-terminal domain
RPD_0585	SSF103481	Multidrug resistance efflux transporter EmrE
RPD_0587	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_0588	SSF110324	Ribosomal L27 protein-like
RPD_0589	SSF141091	L21p-like
RPD_0590	SSF53067	Actin-like ATPase domain
RPD_0591	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0591	SSF52980	Restriction endonuclease-like
RPD_0592	SSF53633	Carbamate kinase-like
RPD_0593	SSF53633	Carbamate kinase-like
RPD_0594	SSF103473	MFS general substrate transporter
RPD_0595	SSF49503	Cupredoxins
RPD_0595	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
RPD_0596	SSF81442	Cytochrome c oxidase subunit I-like
RPD_0597	SSF81452	Cytochrome c oxidase subunit III-like
RPD_0600	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_0600	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_0601	SSF46689	Homeodomain-like
RPD_0601	SSF52172	CheY-like
RPD_0602	SSF51230	Single hybrid motif
RPD_0602	SSF51246	Rudiment single hybrid motif
RPD_0602	SSF52096	ClpP/crotonase
RPD_0602	SSF52440	PreATP-grasp domain
RPD_0602	SSF56059	Glutathione synthetase ATP-binding domain-like
RPD_0603	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPD_0603	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0604	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
RPD_0605	SSF46785	"Winged helix" DNA-binding domain
RPD_0605	SSF55781	GAF domain-like
RPD_0606	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPD_0607	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_0608	SSF89796	CoA-transferase family III (CaiB/BaiF)
RPD_0612	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_0612	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_0613	SSF100950	NagB/RpiA/CoA transferase-like
RPD_0615	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0616	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_0617	SSF52317	Class I glutamine amidotransferase-like
RPD_0617	SSF56634	Heme-dependent catalase-like
RPD_0618	SSF46626	Cytochrome c
RPD_0619	SSF50952	Soluble quinoprotein glucose dehydrogenase
RPD_0620	SSF103473	MFS general substrate transporter
RPD_0622	SSF53927	Cytidine deaminase-like
RPD_0623	SSF50692	ADC-like
RPD_0623	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
RPD_0623	SSF54292	2Fe-2S ferredoxin-like
RPD_0623	SSF54862	4Fe-4S ferredoxins
RPD_0624	SSF140490	Nqo1C-terminal domain-like
RPD_0624	SSF142019	Nqo1 FMN-binding domain-like
RPD_0624	SSF142984	Nqo1 middle domain-like
RPD_0624	SSF52833	Thioredoxin-like
RPD_0625	SSF52833	Thioredoxin-like
RPD_0626	SSF46785	"Winged helix" DNA-binding domain
RPD_0626	SSF53850	Periplasmic binding protein-like II
RPD_0628	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_0630	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RPD_0631	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0632	SSF53807	"Helical backbone" metal receptor
RPD_0634	SSF52317	Class I glutamine amidotransferase-like
RPD_0634	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0635	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0637	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0637	SSF90002	Hypothetical protein YjiA, C-terminal domain
RPD_0638	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0640	SSF52733	Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
RPD_0641	SSF55469	FMN-dependent nitroreductase-like
RPD_0645	SSF54913	GlnB-like
RPD_0648	SSF53474	alpha/beta-Hydrolases
RPD_0651	SSF53254	Phosphoglycerate mutase-like
RPD_0654	SSF46785	"Winged helix" DNA-binding domain
RPD_0654	SSF53850	Periplasmic binding protein-like II
RPD_0658	SSF51569	Aldolase
RPD_0663	SSF56784	HAD-like
RPD_0663	SSF81653	Calcium ATPase, transduction domain A
RPD_0663	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
RPD_0663	SSF81665	Calcium ATPase, transmembrane domain M
RPD_0665	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_0665	SSF52402	Adenine nucleotide alpha hydrolases-like
RPD_0665	SSF55781	GAF domain-like
RPD_0665	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_0666	SSF52172	CheY-like
RPD_0667	SSF55804	Phoshotransferase/anion transport protein
RPD_0670	SSF53850	Periplasmic binding protein-like II
RPD_0685	SSF103473	MFS general substrate transporter
RPD_0686	SSF53474	alpha/beta-Hydrolases
RPD_0687	SSF48264	Cytochrome P450
RPD_0688	SSF158682	TerB-like
RPD_0689	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0690	SSF54427	NTF2-like
RPD_0691	SSF52096	ClpP/crotonase
RPD_0693	SSF69786	YggU-like
RPD_0694	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0694	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RPD_0695	SSF53187	Zn-dependent exopeptidases
RPD_0695	SSF55031	Bacterial exopeptidase dimerisation domain
RPD_0696	SSF50324	Inorganic pyrophosphatase
RPD_0697	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_0698	SSF51905	FAD/NAD(P)-binding domain
RPD_0698	SSF54373	FAD-linked reductases, C-terminal domain
RPD_0699	SSF50447	Translation proteins
RPD_0699	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0699	SSF54980	EF-G C-terminal domain-like
RPD_0700	SSF56935	Porins
RPD_0702	SSF53850	Periplasmic binding protein-like II
RPD_0703	SSF55248	PCD-like
RPD_0705	SSF46689	Homeodomain-like
RPD_0706	SSF51905	FAD/NAD(P)-binding domain
RPD_0707	SSF50129	GroES-like
RPD_0707	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0709	SSF102114	Radical SAM enzymes
RPD_0710	SSF109604	HD-domain/PDEase-like
RPD_0712	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
RPD_0713	SSF52402	Adenine nucleotide alpha hydrolases-like
RPD_0713	SSF69864	Argininosuccinate synthetase, C-terminal domain
RPD_0714	SSF53649	Alkaline phosphatase-like
RPD_0715	SSF50199	Staphylococcal nuclease
RPD_0717	SSF48013	NusB-like
RPD_0717	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_0719	SSF52335	Methylglyoxal synthase-like
RPD_0719	SSF53927	Cytidine deaminase-like
RPD_0720	SSF51569	Aldolase
RPD_0721	SSF103473	MFS general substrate transporter
RPD_0722	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPD_0723	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0724	SSF47616	GST C-terminal domain-like
RPD_0724	SSF52833	Thioredoxin-like
RPD_0725	SSF82771	GIY-YIG endonuclease
RPD_0727	SSF52833	Thioredoxin-like
RPD_0728	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0729	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPD_0729	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0730	SSF81442	Cytochrome c oxidase subunit I-like
RPD_0731	SSF46626	Cytochrome c
RPD_0733	SSF46626	Cytochrome c
RPD_0734	SSF54862	4Fe-4S ferredoxins
RPD_0736	SSF55008	HMA, heavy metal-associated domain
RPD_0736	SSF56784	HAD-like
RPD_0736	SSF81653	Calcium ATPase, transduction domain A
RPD_0736	SSF81665	Calcium ATPase, transmembrane domain M
RPD_0740	SSF46785	"Winged helix" DNA-binding domain
RPD_0740	SSF54909	Dimeric alpha+beta barrel
RPD_0741	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0742	SSF52833	Thioredoxin-like
RPD_0743	SSF55785	PYP-like sensor domain (PAS domain)
RPD_0744	SSF46689	Homeodomain-like
RPD_0744	SSF53098	Ribonuclease H-like
RPD_0745	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0746	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPD_0747	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0748	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0749	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPD_0752	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_0753	SSF53448	Nucleotide-diphospho-sugar transferases
RPD_0755	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPD_0756	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_0757	SSF53448	Nucleotide-diphospho-sugar transferases
RPD_0760	SSF53098	Ribonuclease H-like
RPD_0763	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPD_0764	SSF141868	EAL domain-like
RPD_0764	SSF55073	Nucleotide cyclase
RPD_0764	SSF55785	PYP-like sensor domain (PAS domain)
RPD_0767	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_0767	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_0768	SSF46626	Cytochrome c
RPD_0770	SSF141868	EAL domain-like
RPD_0770	SSF55073	Nucleotide cyclase
RPD_0770	SSF55785	PYP-like sensor domain (PAS domain)
RPD_0771	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0772	SSF48264	Cytochrome P450
RPD_0773	SSF55073	Nucleotide cyclase
RPD_0775	SSF103473	MFS general substrate transporter
RPD_0777	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0778	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0779	SSF53822	Periplasmic binding protein-like I
RPD_0780	SSF53383	PLP-dependent transferases
RPD_0782	SSF50199	Staphylococcal nuclease
RPD_0784	SSF52129	Caspase-like
RPD_0785	SSF51069	Carbonic anhydrase
RPD_0786	SSF51306	LexA/Signal peptidase
RPD_0787	SSF56399	ADP-ribosylation
RPD_0788	SSF51395	FMN-linked oxidoreductases
RPD_0789	SSF56281	Metallo-hydrolase/oxidoreductase
RPD_0790	SSF53056	beta-carbonic anhydrase, cab
RPD_0793	SSF50249	Nucleic acid-binding proteins
RPD_0793	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
RPD_0794	SSF56281	Metallo-hydrolase/oxidoreductase
RPD_0795	SSF56925	OMPA-like
RPD_0796	SSF53822	Periplasmic binding protein-like I
RPD_0797	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0798	SSF56300	Metallo-dependent phosphatases
RPD_0801	SSF81901	HCP-like
RPD_0802	SSF46689	Homeodomain-like
RPD_0803	SSF54427	NTF2-like
RPD_0804	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_0804	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_0805	SSF53901	Thiolase-like
RPD_0806	SSF141868	EAL domain-like
RPD_0807	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPD_0807	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0807	SSF52096	ClpP/crotonase
RPD_0808	SSF47616	GST C-terminal domain-like
RPD_0808	SSF52833	Thioredoxin-like
RPD_0809	SSF46785	"Winged helix" DNA-binding domain
RPD_0810	SSF55931	Glutamine synthetase/guanido kinase
RPD_0812	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
RPD_0814	SSF49503	Cupredoxins
RPD_0814	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
RPD_0815	SSF81442	Cytochrome c oxidase subunit I-like
RPD_0818	SSF110111	Ctag/Cox11
RPD_0819	SSF81452	Cytochrome c oxidase subunit III-like
RPD_0822	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPD_0823	SSF63411	LuxS/MPP-like metallohydrolase
RPD_0824	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_0829	SSF81333	F1F0 ATP synthase subunit C
RPD_0830	SSF81336	F1F0 ATP synthase subunit A
RPD_0832	SSF52833	Thioredoxin-like
RPD_0834	SSF111038	YjbQ-like
RPD_0835	SSF103473	MFS general substrate transporter
RPD_0836	SSF46894	C-terminal effector domain of the bipartite response regulators
RPD_0836	SSF52172	CheY-like
RPD_0837	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_0837	SSF52172	CheY-like
RPD_0837	SSF55785	PYP-like sensor domain (PAS domain)
RPD_0837	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_0838	SSF53383	PLP-dependent transferases
RPD_0839	SSF56281	Metallo-hydrolase/oxidoreductase
RPD_0840	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPD_0841	SSF56925	OMPA-like
RPD_0843	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0844	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RPD_0845	SSF53807	"Helical backbone" metal receptor
RPD_0846	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0846	SSF90002	Hypothetical protein YjiA, C-terminal domain
RPD_0847	SSF63829	Calcium-dependent phosphotriesterase
RPD_0851	SSF54534	FKBP-like
RPD_0852	SSF54534	FKBP-like
RPD_0853	SSF55298	YjgF-like
RPD_0855	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_0856	SSF50621	Alanine racemase C-terminal domain-like
RPD_0856	SSF51419	PLP-binding barrel
RPD_0858	SSF55486	Metalloproteases ("zincins"), catalytic domain
RPD_0861	SSF53800	Chelatase
RPD_0862	SSF117892	Band 7/SPFH domain
RPD_0864	SSF53697	SIS domain
RPD_0868	SSF55073	Nucleotide cyclase
RPD_0869	SSF56601	beta-lactamase/transpeptidase-like
RPD_0870	SSF53448	Nucleotide-diphospho-sugar transferases
RPD_0871	SSF53474	alpha/beta-Hydrolases
RPD_0872	SSF49764	HSP20-like chaperones
RPD_0875	SSF51395	FMN-linked oxidoreductases
RPD_0875	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPD_0875	SSF69336	Alpha subunit of glutamate synthase, C-terminal domain
RPD_0876	SSF46548	alpha-helical ferredoxin
RPD_0876	SSF51971	Nucleotide-binding domain
RPD_0877	SSF47413	lambda repressor-like DNA-binding domains
RPD_0877	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0878	SSF56801	Acetyl-CoA synthetase-like
RPD_0879	SSF53474	alpha/beta-Hydrolases
RPD_0880	SSF52096	ClpP/crotonase
RPD_0881	SSF47240	Ferritin-like
RPD_0882	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0883	SSF88713	Glycoside hydrolase/deacetylase
RPD_0884	SSF103088	OmpA-like
RPD_0887	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_0887	SSF55785	PYP-like sensor domain (PAS domain)
RPD_0887	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_0888	SSF53850	Periplasmic binding protein-like II
RPD_0889	SSF161098	MetI-like
RPD_0890	SSF161098	MetI-like
RPD_0891	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0892	SSF109755	PhoU-like
RPD_0893	SSF46894	C-terminal effector domain of the bipartite response regulators
RPD_0893	SSF52172	CheY-like
RPD_0895	SSF53383	PLP-dependent transferases
RPD_0896	SSF53671	Aspartate/ornithine carbamoyltransferase
RPD_0897	SSF118352	HSP33 redox switch-like
RPD_0897	SSF64397	Hsp33 domain
RPD_0898	SSF110069	ApaG-like
RPD_0900	SSF52266	SGNH hydrolase
RPD_0901	SSF52266	SGNH hydrolase
RPD_0902	SSF141523	L,D-transpeptidase catalytic domain-like
RPD_0903	SSF53383	PLP-dependent transferases
RPD_0904	SSF51283	dUTPase-like
RPD_0905	SSF56300	Metallo-dependent phosphatases
RPD_0906	SSF50952	Soluble quinoprotein glucose dehydrogenase
RPD_0909	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
RPD_0909	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
RPD_0910	SSF140931	Fic-like
RPD_0914	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
RPD_0914	SSF56003	Molybdenum cofactor-binding domain
RPD_0915	SSF56176	FAD-binding/transporter-associated domain-like
RPD_0916	SSF47741	CO dehydrogenase ISP C-domain like
RPD_0916	SSF54292	2Fe-2S ferredoxin-like
RPD_0917	SSF51011	Glycosyl hydrolase domain
RPD_0917	SSF51445	(Trans)glycosidases
RPD_0919	SSF53300	vWA-like
RPD_0920	SSF50346	PRC-barrel domain
RPD_0923	SSF81342	Transmembrane di-heme cytochromes
RPD_0924	SSF48150	DNA-glycosylase
RPD_0925	SSF52374	Nucleotidylyl transferase
RPD_0926	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_0926	SSF52172	CheY-like
RPD_0926	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_0929	SSF89028	Cobalamin adenosyltransferase-like
RPD_0930	SSF52402	Adenine nucleotide alpha hydrolases-like
RPD_0931	SSF52402	Adenine nucleotide alpha hydrolases-like
RPD_0931	SSF52467	DHS-like NAD/FAD-binding domain
RPD_0932	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPD_0932	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0934	SSF54909	Dimeric alpha+beta barrel
RPD_0935	SSF52833	Thioredoxin-like
RPD_0936	SSF48557	L-aspartase-like
RPD_0938	SSF50621	Alanine racemase C-terminal domain-like
RPD_0938	SSF51419	PLP-binding barrel
RPD_0939	SSF69118	AhpD-like
RPD_0941	SSF52172	CheY-like
RPD_0943	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0946	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
RPD_0947	SSF110857	Gamma-glutamyl cyclotransferase-like
RPD_0949	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0950	SSF52768	Arginase/deacetylase
RPD_0951	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_0952	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPD_0955	SSF53271	PRTase-like
RPD_0956	SSF47807	5' to 3' exonuclease, C-terminal subdomain
RPD_0956	SSF53098	Ribonuclease H-like
RPD_0956	SSF56672	DNA/RNA polymerases
RPD_0956	SSF88723	PIN domain-like
RPD_0958	SSF46548	alpha-helical ferredoxin
RPD_0958	SSF51971	Nucleotide-binding domain
RPD_0958	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
RPD_0958	SSF63380	Riboflavin synthase domain-like
RPD_0959	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPD_0959	SSF52922	TK C-terminal domain-like
RPD_0959	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
RPD_0959	SSF54862	4Fe-4S ferredoxins
RPD_0962	SSF46785	"Winged helix" DNA-binding domain
RPD_0962	SSF50331	MOP-like
RPD_0963	SSF53850	Periplasmic binding protein-like II
RPD_0964	SSF161098	MetI-like
RPD_0965	SSF50331	MOP-like
RPD_0965	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_0967	SSF52743	Subtilisin-like
RPD_0968	SSF46894	C-terminal effector domain of the bipartite response regulators
RPD_0968	SSF48452	TPR-like
RPD_0969	SSF48264	Cytochrome P450
RPD_0969	SSF54909	Dimeric alpha+beta barrel
RPD_0970	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase
RPD_0971	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPD_0971	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPD_0975	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_0976	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
RPD_0979	SSF101386	all-alpha NTP pyrophosphatases
RPD_0981	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_0981	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPD_0982	SSF53213	LigB-like
RPD_0983	SSF48076	LigA subunit of an aromatic-ring-opening dioxygenase LigAB
RPD_0984	SSF51556	Metallo-dependent hydrolases
RPD_0986	SSF89562	RraA-like
RPD_0987	SSF51556	Metallo-dependent hydrolases
RPD_0988	SSF54506	Diaminopimelate epimerase-like
RPD_0989	SSF46785	"Winged helix" DNA-binding domain
RPD_0989	SSF53850	Periplasmic binding protein-like II
RPD_0990	SSF53850	Periplasmic binding protein-like II
RPD_0991	SSF51395	FMN-linked oxidoreductases
RPD_0994	SSF158472	HAMP domain-like
RPD_0994	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPD_0995	SSF158472	HAMP domain-like
RPD_0995	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPD_0997	SSF52833	Thioredoxin-like
RPD_0998	SSF160246	EspE N-terminal domain-like
RPD_0998	SSF53448	Nucleotide-diphospho-sugar transferases
RPD_0999	SSF53850	Periplasmic binding protein-like II
RPD_1000	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
RPD_1000	SSF52374	Nucleotidylyl transferase
RPD_1003	SSF158472	HAMP domain-like
RPD_1003	SSF55073	Nucleotide cyclase
RPD_1003	SSF55781	GAF domain-like
RPD_1005	SSF46785	"Winged helix" DNA-binding domain
RPD_1005	SSF51206	cAMP-binding domain-like
RPD_1006	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPD_1006	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPD_1006	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPD_1007	SSF51230	Single hybrid motif
RPD_1008	SSF103088	OmpA-like
RPD_1009	SSF48452	TPR-like
RPD_1009	SSF52129	Caspase-like
RPD_1011	SSF52129	Caspase-like
RPD_1012	SSF103088	OmpA-like
RPD_1013	SSF103515	Autotransporter
RPD_1013	SSF56925	OMPA-like
RPD_1014	SSF46785	"Winged helix" DNA-binding domain
RPD_1015	SSF51905	FAD/NAD(P)-binding domain
RPD_1017	SSF56281	Metallo-hydrolase/oxidoreductase
RPD_1018	SSF51182	RmlC-like cupins
RPD_1019	SSF47616	GST C-terminal domain-like
RPD_1019	SSF52833	Thioredoxin-like
RPD_1020	SSF56529	FAH
RPD_1020	SSF63433	Fumarylacetoacetate hydrolase, FAH, N-terminal domain
RPD_1021	SSF89796	CoA-transferase family III (CaiB/BaiF)
RPD_1022	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
RPD_1022	SSF56176	FAD-binding/transporter-associated domain-like
RPD_1023	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
RPD_1023	SSF56003	Molybdenum cofactor-binding domain
RPD_1024	SSF47741	CO dehydrogenase ISP C-domain like
RPD_1024	SSF54292	2Fe-2S ferredoxin-like
RPD_1025	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPD_1026	SSF103473	MFS general substrate transporter
RPD_1027	SSF56784	HAD-like
RPD_1028	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPD_1031	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1031	SSF52210	Succinyl-CoA synthetase domains
RPD_1031	SSF56059	Glutathione synthetase ATP-binding domain-like
RPD_1032	SSF53850	Periplasmic binding protein-like II
RPD_1033	SSF161098	MetI-like
RPD_1034	SSF50331	MOP-like
RPD_1034	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1035	SSF51905	FAD/NAD(P)-binding domain
RPD_1036	SSF55103	FAD-linked oxidases, C-terminal domain
RPD_1036	SSF56176	FAD-binding/transporter-associated domain-like
RPD_1037	SSF53067	Actin-like ATPase domain
RPD_1038	SSF46689	Homeodomain-like
RPD_1039	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1041	SSF46785	"Winged helix" DNA-binding domain
RPD_1042	SSF53822	Periplasmic binding protein-like I
RPD_1043	SSF75304	Amidase signature (AS) enzymes
RPD_1045	SSF53822	Periplasmic binding protein-like I
RPD_1047	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1048	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1049	SSF56796	Dehydroquinate synthase-like
RPD_1050	SSF56655	Carbohydrate phosphatase
RPD_1051	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1052	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPD_1052	SSF52922	TK C-terminal domain-like
RPD_1053	SSF51569	Aldolase
RPD_1054	SSF51649	RuBisCo, C-terminal domain
RPD_1054	SSF54966	RuBisCO, large subunit, small (N-terminal) domain
RPD_1057	SSF50037	C-terminal domain of transcriptional repressors
RPD_1058	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1060	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1061	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1061	SSF55781	GAF domain-like
RPD_1062	SSF54862	4Fe-4S ferredoxins
RPD_1063	SSF102114	Radical SAM enzymes
RPD_1063	SSF53146	Nitrogenase accessory factor-like
RPD_1064	SSF54862	4Fe-4S ferredoxins
RPD_1065	SSF89360	HesB-like domain
RPD_1066	SSF48452	TPR-like
RPD_1067	SSF48371	ARM repeat
RPD_1070	SSF159203	NifT/FixU-like
RPD_1073	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1074	SSF53807	"Helical backbone" metal receptor
RPD_1075	SSF53807	"Helical backbone" metal receptor
RPD_1076	SSF53807	"Helical backbone" metal receptor
RPD_1077	SSF53807	"Helical backbone" metal receptor
RPD_1078	SSF53146	Nitrogenase accessory factor-like
RPD_1081	SSF46548	alpha-helical ferredoxin
RPD_1083	SSF89360	HesB-like domain
RPD_1084	SSF117916	Fe-S cluster assembly (FSCA) domain-like
RPD_1084	SSF82649	SufE/NifU
RPD_1085	SSF53383	PLP-dependent transferases
RPD_1086	SSF51569	Aldolase
RPD_1088	SSF52402	Adenine nucleotide alpha hydrolases-like
RPD_1089	SSF52402	Adenine nucleotide alpha hydrolases-like
RPD_1089	SSF52467	DHS-like NAD/FAD-binding domain
RPD_1090	SSF51905	FAD/NAD(P)-binding domain
RPD_1090	SSF54373	FAD-linked reductases, C-terminal domain
RPD_1091	SSF54862	4Fe-4S ferredoxins
RPD_1093	SSF51182	RmlC-like cupins
RPD_1094	SSF47336	ACP-like
RPD_1095	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_1095	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_1096	SSF55681	Class II aaRS and biotin synthetases
RPD_1097	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1098	SSF56801	Acetyl-CoA synthetase-like
RPD_1100	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_1101	SSF52467	DHS-like NAD/FAD-binding domain
RPD_1101	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPD_1102	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
RPD_1103	SSF56801	Acetyl-CoA synthetase-like
RPD_1104	SSF53383	PLP-dependent transferases
RPD_1105	SSF52317	Class I glutamine amidotransferase-like
RPD_1106	SSF50475	FMN-binding split barrel
RPD_1109	SSF75005	Arabinanase/levansucrase/invertase
RPD_1110	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPD_1111	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1113	SSF51445	(Trans)glycosidases
RPD_1115	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1117	SSF50156	PDZ domain-like
RPD_1117	SSF50494	Trypsin-like serine proteases
RPD_1121	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1125	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1126	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1127	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPD_1127	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_1128	SSF53067	Actin-like ATPase domain
RPD_1129	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_1131	SSF50199	Staphylococcal nuclease
RPD_1132	SSF52096	ClpP/crotonase
RPD_1133	SSF56801	Acetyl-CoA synthetase-like
RPD_1134	SSF46785	"Winged helix" DNA-binding domain
RPD_1134	SSF55781	GAF domain-like
RPD_1135	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_1136	SSF53822	Periplasmic binding protein-like I
RPD_1137	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1138	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1141	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPD_1142	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1142	SSF90123	ABC transporter transmembrane region
RPD_1143	SSF48208	Six-hairpin glycosidases
RPD_1144	SSF50346	PRC-barrel domain
RPD_1145	SSF103473	MFS general substrate transporter
RPD_1147	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPD_1148	SSF51905	FAD/NAD(P)-binding domain
RPD_1149	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1150	SSF161098	MetI-like
RPD_1151	SSF161098	MetI-like
RPD_1152	SSF53850	Periplasmic binding protein-like II
RPD_1153	SSF50447	Translation proteins
RPD_1153	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
RPD_1153	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1154	SSF52402	Adenine nucleotide alpha hydrolases-like
RPD_1155	SSF52402	Adenine nucleotide alpha hydrolases-like
RPD_1156	SSF53850	Periplasmic binding protein-like II
RPD_1157	SSF161098	MetI-like
RPD_1158	SSF161098	MetI-like
RPD_1159	SSF50331	MOP-like
RPD_1159	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1160	SSF56770	HydA/Nqo6-like
RPD_1161	SSF56762	HydB/Nqo4-like
RPD_1162	SSF56770	HydA/Nqo6-like
RPD_1163	SSF56762	HydB/Nqo4-like
RPD_1164	SSF81342	Transmembrane di-heme cytochromes
RPD_1165	SSF53163	HybD-like
RPD_1167	SSF159127	HupF/HypC-like
RPD_1168	SSF52833	Thioredoxin-like
RPD_1170	SSF57802	Rubredoxin-like
RPD_1172	SSF56762	HydB/Nqo4-like
RPD_1174	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1175	SSF54975	Acylphosphatase/BLUF domain-like
RPD_1175	SSF55821	YrdC/RibB
RPD_1176	SSF159127	HupF/HypC-like
RPD_1178	SSF55326	PurM N-terminal domain-like
RPD_1178	SSF56042	PurM C-terminal domain-like
RPD_1179	SSF46689	Homeodomain-like
RPD_1179	SSF52172	CheY-like
RPD_1179	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1180	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_1180	SSF55785	PYP-like sensor domain (PAS domain)
RPD_1180	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_1181	SSF53474	alpha/beta-Hydrolases
RPD_1182	SSF46785	"Winged helix" DNA-binding domain
RPD_1183	SSF52821	Rhodanese/Cell cycle control phosphatase
RPD_1184	SSF51905	FAD/NAD(P)-binding domain
RPD_1185	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_1186	SSF52833	Thioredoxin-like
RPD_1188	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
RPD_1188	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
RPD_1189	SSF56801	Acetyl-CoA synthetase-like
RPD_1191	SSF55811	Nudix
RPD_1193	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_1194	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1194	SSF75553	Smc hinge domain
RPD_1195	SSF47413	lambda repressor-like DNA-binding domains
RPD_1196	SSF103481	Multidrug resistance efflux transporter EmrE
RPD_1197	SSF52833	Thioredoxin-like
RPD_1199	SSF48150	DNA-glycosylase
RPD_1199	SSF55811	Nudix
RPD_1200	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_1202	SSF53218	Molybdenum cofactor biosynthesis proteins
RPD_1203	SSF100950	NagB/RpiA/CoA transferase-like
RPD_1204	SSF100950	NagB/RpiA/CoA transferase-like
RPD_1205	SSF53448	Nucleotide-diphospho-sugar transferases
RPD_1206	SSF102114	Radical SAM enzymes
RPD_1207	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPD_1208	SSF53098	Ribonuclease H-like
RPD_1210	SSF52141	Uracil-DNA glycosylase-like
RPD_1211	SSF51905	FAD/NAD(P)-binding domain
RPD_1211	SSF54373	FAD-linked reductases, C-terminal domain
RPD_1211	SSF54862	4Fe-4S ferredoxins
RPD_1212	SSF48452	TPR-like
RPD_1213	SSF54211	Ribosomal protein S5 domain 2-like
RPD_1213	SSF55060	GHMP Kinase, C-terminal domain
RPD_1214	SSF48576	Terpenoid synthases
RPD_1215	SSF54913	GlnB-like
RPD_1216	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_1217	SSF52096	ClpP/crotonase
RPD_1219	SSF55681	Class II aaRS and biotin synthetases
RPD_1220	SSF52980	Restriction endonuclease-like
RPD_1221	SSF109604	HD-domain/PDEase-like
RPD_1224	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPD_1224	SSF52009	Phosphohistidine domain
RPD_1224	SSF56059	Glutathione synthetase ATP-binding domain-like
RPD_1227	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
RPD_1227	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
RPD_1228	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
RPD_1228	SSF51905	FAD/NAD(P)-binding domain
RPD_1228	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
RPD_1229	SSF142754	NadA-like
RPD_1230	SSF50129	GroES-like
RPD_1230	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1233	SSF46785	"Winged helix" DNA-binding domain
RPD_1233	SSF55811	Nudix
RPD_1234	SSF52799	(Phosphotyrosine protein) phosphatases II
RPD_1235	SSF109604	HD-domain/PDEase-like
RPD_1237	SSF48150	DNA-glycosylase
RPD_1238	SSF103025	Folate-binding domain
RPD_1239	SSF51338	Composite domain of metallo-dependent hydrolases
RPD_1239	SSF51556	Metallo-dependent hydrolases
RPD_1243	SSF55811	Nudix
RPD_1245	SSF143081	BB1717-like
RPD_1246	SSF55103	FAD-linked oxidases, C-terminal domain
RPD_1246	SSF56176	FAD-binding/transporter-associated domain-like
RPD_1247	SSF55821	YrdC/RibB
RPD_1248	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_1248	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_1249	SSF53681	Aspartate/glutamate racemase
RPD_1250	SSF50129	GroES-like
RPD_1250	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1251	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_1252	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1253	SSF46785	"Winged helix" DNA-binding domain
RPD_1253	SSF54909	Dimeric alpha+beta barrel
RPD_1254	SSF53822	Periplasmic binding protein-like I
RPD_1255	SSF56801	Acetyl-CoA synthetase-like
RPD_1257	SSF53383	PLP-dependent transferases
RPD_1260	SSF46785	"Winged helix" DNA-binding domain
RPD_1260	SSF51206	cAMP-binding domain-like
RPD_1262	SSF69118	AhpD-like
RPD_1263	SSF142695	RibA-like
RPD_1263	SSF55821	YrdC/RibB
RPD_1264	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_1264	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_1265	SSF56281	Metallo-hydrolase/oxidoreductase
RPD_1267	SSF56801	Acetyl-CoA synthetase-like
RPD_1269	SSF141523	L,D-transpeptidase catalytic domain-like
RPD_1270	SSF143865	CorA soluble domain-like
RPD_1270	SSF144083	Magnesium transport protein CorA, transmembrane region
RPD_1272	SSF53927	Cytidine deaminase-like
RPD_1273	SSF55120	Pseudouridine synthase
RPD_1273	SSF55174	Alpha-L RNA-binding motif
RPD_1274	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_1275	SSF46894	C-terminal effector domain of the bipartite response regulators
RPD_1276	SSF52768	Arginase/deacetylase
RPD_1277	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_1278	SSF54690	Molybdopterin synthase subunit MoaE
RPD_1279	SSF54285	MoaD/ThiS
RPD_1281	SSF46600	C-terminal UvrC-binding domain of UvrB
RPD_1281	SSF47781	RuvA domain 2-like
RPD_1281	SSF82771	GIY-YIG endonuclease
RPD_1282	SSF56925	OMPA-like
RPD_1283	SSF50249	Nucleic acid-binding proteins
RPD_1284	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_1285	SSF52172	CheY-like
RPD_1286	SSF56784	HAD-like
RPD_1287	SSF141868	EAL domain-like
RPD_1288	SSF53383	PLP-dependent transferases
RPD_1289	SSF52954	Class II aaRS ABD-related
RPD_1289	SSF55681	Class II aaRS and biotin synthetases
RPD_1290	SSF55331	Tautomerase/MIF
RPD_1291	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_1292	SSF52317	Class I glutamine amidotransferase-like
RPD_1293	SSF52317	Class I glutamine amidotransferase-like
RPD_1295	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1297	SSF55811	Nudix
RPD_1299	SSF81301	Nucleotidyltransferase
RPD_1299	SSF81891	Poly A polymerase C-terminal region-like
RPD_1300	SSF102114	Radical SAM enzymes
RPD_1301	SSF75217	alpha/beta knot
RPD_1302	SSF50022	ISP domain
RPD_1303	SSF46626	Cytochrome c
RPD_1303	SSF81342	Transmembrane di-heme cytochromes
RPD_1303	SSF81496	Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
RPD_1303	SSF81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
RPD_1304	SSF53474	alpha/beta-Hydrolases
RPD_1306	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1307	SSF50475	FMN-binding split barrel
RPD_1309	SSF46565	Chaperone J-domain
RPD_1309	SSF49493	HSP40/DnaJ peptide-binding domain
RPD_1311	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPD_1311	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPD_1312	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1313	SSF53254	Phosphoglycerate mutase-like
RPD_1314	SSF103263	Chorismate synthase, AroC
RPD_1315	SSF54736	ClpS-like
RPD_1316	SSF53300	vWA-like
RPD_1319	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1321	SSF53474	alpha/beta-Hydrolases
RPD_1323	SSF56801	Acetyl-CoA synthetase-like
RPD_1324	SSF56601	beta-lactamase/transpeptidase-like
RPD_1325	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1325	SSF90123	ABC transporter transmembrane region
RPD_1327	SSF56770	HydA/Nqo6-like
RPD_1328	SSF143243	Nqo5-like
RPD_1328	SSF56762	HydB/Nqo4-like
RPD_1329	SSF52833	Thioredoxin-like
RPD_1330	SSF140490	Nqo1C-terminal domain-like
RPD_1330	SSF142019	Nqo1 FMN-binding domain-like
RPD_1330	SSF142984	Nqo1 middle domain-like
RPD_1331	SSF50692	ADC-like
RPD_1331	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
RPD_1331	SSF54292	2Fe-2S ferredoxin-like
RPD_1331	SSF54862	4Fe-4S ferredoxins
RPD_1333	SSF54862	4Fe-4S ferredoxins
RPD_1339	SSF53383	PLP-dependent transferases
RPD_1340	SSF46785	"Winged helix" DNA-binding domain
RPD_1340	SSF51206	cAMP-binding domain-like
RPD_1341	SSF52172	CheY-like
RPD_1342	SSF46894	C-terminal effector domain of the bipartite response regulators
RPD_1342	SSF52172	CheY-like
RPD_1343	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_1343	SSF55785	PYP-like sensor domain (PAS domain)
RPD_1343	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_1344	SSF54631	CBS-domain pair
RPD_1345	SSF52402	Adenine nucleotide alpha hydrolases-like
RPD_1346	SSF52402	Adenine nucleotide alpha hydrolases-like
RPD_1348	SSF53474	alpha/beta-Hydrolases
RPD_1349	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1349	SSF56112	Protein kinase-like (PK-like)
RPD_1350	SSF54631	CBS-domain pair
RPD_1351	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1351	SSF52210	Succinyl-CoA synthetase domains
RPD_1351	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_1351	SSF56059	Glutathione synthetase ATP-binding domain-like
RPD_1353	SSF52091	SpoIIaa-like
RPD_1354	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1355	SSF159594	XCC0632-like
RPD_1356	SSF46626	Cytochrome c
RPD_1357	SSF46785	"Winged helix" DNA-binding domain
RPD_1357	SSF51206	cAMP-binding domain-like
RPD_1358	SSF51206	cAMP-binding domain-like
RPD_1358	SSF81324	Voltage-gated potassium channels
RPD_1360	SSF50692	ADC-like
RPD_1360	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
RPD_1364	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1366	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPD_1366	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPD_1368	SSF52172	CheY-like
RPD_1371	SSF141523	L,D-transpeptidase catalytic domain-like
RPD_1374	SSF69047	Hypothetical protein YjbJ
RPD_1375	SSF51645	Malate synthase G
RPD_1376	SSF161098	MetI-like
RPD_1377	SSF161098	MetI-like
RPD_1378	SSF53850	Periplasmic binding protein-like II
RPD_1379	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1379	SSF53790	Tetrapyrrole methylase
RPD_1379	SSF75615	Siroheme synthase middle domains-like
RPD_1381	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
RPD_1381	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
RPD_1383	SSF56601	beta-lactamase/transpeptidase-like
RPD_1385	SSF54368	Glutamine synthetase, N-terminal domain
RPD_1385	SSF55931	Glutamine synthetase/guanido kinase
RPD_1386	SSF55797	PR-1-like
RPD_1388	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1393	SSF55785	PYP-like sensor domain (PAS domain)
RPD_1394	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPD_1396	SSF55826	YbaK/ProRS associated domain
RPD_1397	SSF51556	Metallo-dependent hydrolases
RPD_1398	SSF57840	Ribosomal protein L36
RPD_1399	SSF48452	TPR-like
RPD_1400	SSF53474	alpha/beta-Hydrolases
RPD_1401	SSF82784	OsmC-like
RPD_1402	SSF50800	PK beta-barrel domain-like
RPD_1402	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPD_1402	SSF52935	PK C-terminal domain-like
RPD_1404	SSF158757	SMc04008-like
RPD_1406	SSF55166	Hedgehog/DD-peptidase
RPD_1407	SSF141523	L,D-transpeptidase catalytic domain-like
RPD_1407	SSF47090	PGBD-like
RPD_1408	SSF46689	Homeodomain-like
RPD_1408	SSF52172	CheY-like
RPD_1408	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1411	SSF55486	Metalloproteases ("zincins"), catalytic domain
RPD_1412	SSF89447	AbrB/MazE/MraZ-like
RPD_1413	SSF140931	Fic-like
RPD_1414	SSF81469	Bacterial aa3 type cytochrome c oxidase subunit IV
RPD_1415	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1415	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RPD_1417	SSF52467	DHS-like NAD/FAD-binding domain
RPD_1418	SSF81301	Nucleotidyltransferase
RPD_1419	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPD_1420	SSF51182	RmlC-like cupins
RPD_1423	SSF51246	Rudiment single hybrid motif
RPD_1423	SSF52440	PreATP-grasp domain
RPD_1423	SSF56059	Glutathione synthetase ATP-binding domain-like
RPD_1424	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
RPD_1425	SSF55073	Nucleotide cyclase
RPD_1428	SSF51905	FAD/NAD(P)-binding domain
RPD_1429	SSF141868	EAL domain-like
RPD_1429	SSF55073	Nucleotide cyclase
RPD_1429	SSF55785	PYP-like sensor domain (PAS domain)
RPD_1430	SSF50331	MOP-like
RPD_1430	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1431	SSF161098	MetI-like
RPD_1432	SSF161098	MetI-like
RPD_1434	SSF100950	NagB/RpiA/CoA transferase-like
RPD_1435	SSF100950	NagB/RpiA/CoA transferase-like
RPD_1436	SSF56784	HAD-like
RPD_1436	SSF81653	Calcium ATPase, transduction domain A
RPD_1436	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
RPD_1436	SSF81665	Calcium ATPase, transmembrane domain M
RPD_1438	SSF161098	MetI-like
RPD_1439	SSF53850	Periplasmic binding protein-like II
RPD_1441	SSF56281	Metallo-hydrolase/oxidoreductase
RPD_1442	SSF53271	PRTase-like
RPD_1443	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
RPD_1443	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
RPD_1443	SSF54680	Pyrimidine nucleoside phosphorylase C-terminal domain
RPD_1444	SSF46785	"Winged helix" DNA-binding domain
RPD_1444	SSF51206	cAMP-binding domain-like
RPD_1445	SSF88723	PIN domain-like
RPD_1447	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_1447	SSF55785	PYP-like sensor domain (PAS domain)
RPD_1447	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_1451	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1452	SSF46785	"Winged helix" DNA-binding domain
RPD_1452	SSF53850	Periplasmic binding protein-like II
RPD_1453	SSF51905	FAD/NAD(P)-binding domain
RPD_1454	SSF46785	"Winged helix" DNA-binding domain
RPD_1454	SSF54909	Dimeric alpha+beta barrel
RPD_1456	SSF46557	GreA transcript cleavage protein, N-terminal domain
RPD_1456	SSF54534	FKBP-like
RPD_1457	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
RPD_1457	SSF52335	Methylglyoxal synthase-like
RPD_1457	SSF52440	PreATP-grasp domain
RPD_1457	SSF56059	Glutathione synthetase ATP-binding domain-like
RPD_1458	SSF55068	Peptide methionine sulfoxide reductase
RPD_1459	SSF51316	Mss4-like
RPD_1464	SSF53738	Phosphoglucomutase, first 3 domains
RPD_1464	SSF55957	Phosphoglucomutase, C-terminal domain
RPD_1465	SSF54001	Cysteine proteinases
RPD_1468	SSF53474	alpha/beta-Hydrolases
RPD_1469	SSF111369	HlyD-like secretion proteins
RPD_1471	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1472	SSF53137	Translational machinery components
RPD_1473	SSF53822	Periplasmic binding protein-like I
RPD_1475	SSF52096	ClpP/crotonase
RPD_1477	SSF55073	Nucleotide cyclase
RPD_1478	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RPD_1480	SSF47240	Ferritin-like
RPD_1480	SSF56784	HAD-like
RPD_1480	SSF81653	Calcium ATPase, transduction domain A
RPD_1480	SSF81665	Calcium ATPase, transmembrane domain M
RPD_1483	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPD_1485	SSF102114	Radical SAM enzymes
RPD_1486	SSF111126	Ligand-binding domain in the NO signalling and Golgi transport
RPD_1487	SSF102114	Radical SAM enzymes
RPD_1487	SSF52242	Cobalamin (vitamin B12)-binding domain
RPD_1489	SSF56300	Metallo-dependent phosphatases
RPD_1490	SSF52402	Adenine nucleotide alpha hydrolases-like
RPD_1490	SSF56112	Protein kinase-like (PK-like)
RPD_1492	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPD_1493	SSF52172	CheY-like
RPD_1494	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
RPD_1494	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_1496	SSF141868	EAL domain-like
RPD_1496	SSF52172	CheY-like
RPD_1497	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RPD_1497	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_1497	SSF52172	CheY-like
RPD_1497	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_1498	SSF53850	Periplasmic binding protein-like II
RPD_1499	SSF46894	C-terminal effector domain of the bipartite response regulators
RPD_1499	SSF52172	CheY-like
RPD_1500	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1501	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1502	SSF51905	FAD/NAD(P)-binding domain
RPD_1502	SSF54373	FAD-linked reductases, C-terminal domain
RPD_1503	SSF53720	ALDH-like
RPD_1504	SSF46955	Putative DNA-binding domain
RPD_1505	SSF55008	HMA, heavy metal-associated domain
RPD_1505	SSF56784	HAD-like
RPD_1505	SSF81653	Calcium ATPase, transduction domain A
RPD_1505	SSF81665	Calcium ATPase, transmembrane domain M
RPD_1506	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_1507	SSF50692	ADC-like
RPD_1507	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
RPD_1508	SSF54862	4Fe-4S ferredoxins
RPD_1510	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
RPD_1511	SSF54862	4Fe-4S ferredoxins
RPD_1512	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPD_1512	SSF52922	TK C-terminal domain-like
RPD_1513	SSF51905	FAD/NAD(P)-binding domain
RPD_1514	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPD_1514	SSF54862	4Fe-4S ferredoxins
RPD_1515	SSF56801	Acetyl-CoA synthetase-like
RPD_1518	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1519	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1520	SSF53822	Periplasmic binding protein-like I
RPD_1521	SSF46785	"Winged helix" DNA-binding domain
RPD_1522	SSF46785	"Winged helix" DNA-binding domain
RPD_1522	SSF51206	cAMP-binding domain-like
RPD_1523	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
RPD_1523	SSF56176	FAD-binding/transporter-associated domain-like
RPD_1524	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
RPD_1524	SSF56003	Molybdenum cofactor-binding domain
RPD_1525	SSF47741	CO dehydrogenase ISP C-domain like
RPD_1525	SSF54292	2Fe-2S ferredoxin-like
RPD_1526	SSF56801	Acetyl-CoA synthetase-like
RPD_1527	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_1528	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_1529	SSF46785	"Winged helix" DNA-binding domain
RPD_1530	SSF47240	Ferritin-like
RPD_1531	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPD_1532	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPD_1532	SSF52922	TK C-terminal domain-like
RPD_1532	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
RPD_1533	SSF54862	4Fe-4S ferredoxins
RPD_1534	SSF56801	Acetyl-CoA synthetase-like
RPD_1535	SSF53067	Actin-like ATPase domain
RPD_1536	SSF53067	Actin-like ATPase domain
RPD_1539	SSF50129	GroES-like
RPD_1539	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1540	SSF46785	"Winged helix" DNA-binding domain
RPD_1541	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1542	SSF52096	ClpP/crotonase
RPD_1543	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_1543	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_1544	SSF56801	Acetyl-CoA synthetase-like
RPD_1545	SSF52096	ClpP/crotonase
RPD_1546	SSF53300	vWA-like
RPD_1547	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1548	SSF55239	RuBisCO, small subunit
RPD_1549	SSF51649	RuBisCo, C-terminal domain
RPD_1549	SSF54966	RuBisCO, large subunit, small (N-terminal) domain
RPD_1550	SSF46785	"Winged helix" DNA-binding domain
RPD_1550	SSF53850	Periplasmic binding protein-like II
RPD_1553	SSF46689	Homeodomain-like
RPD_1554	SSF81342	Transmembrane di-heme cytochromes
RPD_1555	SSF111369	HlyD-like secretion proteins
RPD_1556	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPD_1556	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPD_1556	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPD_1558	SSF46894	C-terminal effector domain of the bipartite response regulators
RPD_1558	SSF52172	CheY-like
RPD_1559	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_1560	SSF48113	Heme-dependent peroxidases
RPD_1560	SSF51120	beta-Roll
RPD_1561	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1561	SSF90123	ABC transporter transmembrane region
RPD_1562	SSF51120	beta-Roll
RPD_1565	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1566	SSF53822	Periplasmic binding protein-like I
RPD_1569	SSF56801	Acetyl-CoA synthetase-like
RPD_1570	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1571	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1572	SSF51182	RmlC-like cupins
RPD_1573	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1574	SSF53448	Nucleotide-diphospho-sugar transferases
RPD_1576	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1577	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1580	SSF53822	Periplasmic binding protein-like I
RPD_1581	SSF89796	CoA-transferase family III (CaiB/BaiF)
RPD_1583	SSF53328	Formyltransferase
RPD_1583	SSF55021	ACT-like
RPD_1586	SSF53822	Periplasmic binding protein-like I
RPD_1589	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1590	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1591	SSF51726	UROD/MetE-like
RPD_1592	SSF53448	Nucleotide-diphospho-sugar transferases
RPD_1593	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPD_1593	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1593	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
RPD_1595	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_1596	SSF55973	S-adenosylmethionine synthetase
RPD_1597	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1597	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RPD_1598	SSF48150	DNA-glycosylase
RPD_1599	SSF52402	Adenine nucleotide alpha hydrolases-like
RPD_1600	SSF52309	N-(deoxy)ribosyltransferase-like
RPD_1600	SSF53613	Ribokinase-like
RPD_1602	SSF88723	PIN domain-like
RPD_1603	SSF143120	YefM-like
RPD_1607	SSF56529	FAH
RPD_1608	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1608	SSF90123	ABC transporter transmembrane region
RPD_1609	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1610	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPD_1611	SSF56784	HAD-like
RPD_1612	SSF53697	SIS domain
RPD_1613	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPD_1614	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1615	SSF52374	Nucleotidylyl transferase
RPD_1615	SSF53613	Ribokinase-like
RPD_1616	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1617	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1618	SSF51182	RmlC-like cupins
RPD_1618	SSF53448	Nucleotide-diphospho-sugar transferases
RPD_1619	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1619	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPD_1620	SSF53383	PLP-dependent transferases
RPD_1622	SSF53067	Actin-like ATPase domain
RPD_1624	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
RPD_1624	SSF56003	Molybdenum cofactor-binding domain
RPD_1625	SSF47175	Cytochromes
RPD_1626	SSF46626	Cytochrome c
RPD_1627	SSF54909	Dimeric alpha+beta barrel
RPD_1628	SSF53613	Ribokinase-like
RPD_1629	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_1630	SSF56300	Metallo-dependent phosphatases
RPD_1631	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPD_1632	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPD_1634	SSF103473	MFS general substrate transporter
RPD_1635	SSF51604	Enolase C-terminal domain-like
RPD_1635	SSF54826	Enolase N-terminal domain-like
RPD_1636	SSF52091	SpoIIaa-like
RPD_1637	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1639	SSF48452	TPR-like
RPD_1639	SSF48695	Multiheme cytochromes
RPD_1640	SSF53649	Alkaline phosphatase-like
RPD_1641	SSF58113	Apolipoprotein A-I
RPD_1642	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RPD_1643	SSF54292	2Fe-2S ferredoxin-like
RPD_1644	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_1645	SSF51905	FAD/NAD(P)-binding domain
RPD_1646	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1647	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1648	SSF53448	Nucleotide-diphospho-sugar transferases
RPD_1649	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPD_1652	SSF52151	FabD/lysophospholipase-like
RPD_1655	SSF52266	SGNH hydrolase
RPD_1657	SSF47240	Ferritin-like
RPD_1660	SSF52402	Adenine nucleotide alpha hydrolases-like
RPD_1661	SSF53254	Phosphoglycerate mutase-like
RPD_1662	SSF51905	FAD/NAD(P)-binding domain
RPD_1663	SSF51316	Mss4-like
RPD_1666	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_1666	SSF52172	CheY-like
RPD_1666	SSF55781	GAF domain-like
RPD_1666	SSF55785	PYP-like sensor domain (PAS domain)
RPD_1666	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_1667	SSF117143	Flagellar hook protein flgE
RPD_1668	SSF64518	Phase 1 flagellin
RPD_1669	SSF64518	Phase 1 flagellin
RPD_1670	SSF64518	Phase 1 flagellin
RPD_1671	SSF64518	Phase 1 flagellin
RPD_1679	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
RPD_1679	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RPD_1683	SSF117143	Flagellar hook protein flgE
RPD_1684	SSF117143	Flagellar hook protein flgE
RPD_1686	SSF101801	Surface presentation of antigens (SPOA)
RPD_1686	SSF103039	CheC-like
RPD_1688	SSF158791	MgtE N-terminal domain-like
RPD_1690	SSF48452	TPR-like
RPD_1698	SSF160544	EscU C-terminal domain-like
RPD_1700	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_1700	SSF52172	CheY-like
RPD_1700	SSF55785	PYP-like sensor domain (PAS domain)
RPD_1700	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_1701	SSF54427	NTF2-like
RPD_1702	SSF56436	C-type lectin-like
RPD_1703	SSF47616	GST C-terminal domain-like
RPD_1703	SSF52833	Thioredoxin-like
RPD_1704	SSF51316	Mss4-like
RPD_1708	SSF117457	FumA C-terminal domain-like
RPD_1714	SSF82199	SET domain
RPD_1716	SSF47413	lambda repressor-like DNA-binding domains
RPD_1717	SSF52833	Thioredoxin-like
RPD_1718	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_1719	SSF52129	Caspase-like
RPD_1720	SSF141371	PilZ domain-like
RPD_1721	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_1723	SSF46785	"Winged helix" DNA-binding domain
RPD_1723	SSF51206	cAMP-binding domain-like
RPD_1727	SSF52172	CheY-like
RPD_1730	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1730	SSF54752	RecA protein, C-terminal domain
RPD_1731	SSF53383	PLP-dependent transferases
RPD_1732	SSF51230	Single hybrid motif
RPD_1733	SSF101790	Aminomethyltransferase beta-barrel domain
RPD_1733	SSF103025	Folate-binding domain
RPD_1734	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
RPD_1734	SSF50447	Translation proteins
RPD_1734	SSF55186	ThrRS/AlaRS common domain
RPD_1734	SSF55681	Class II aaRS and biotin synthetases
RPD_1735	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1736	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1737	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPD_1738	SSF75217	alpha/beta knot
RPD_1739	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPD_1741	SSF54534	FKBP-like
RPD_1742	SSF46785	"Winged helix" DNA-binding domain
RPD_1742	SSF51206	cAMP-binding domain-like
RPD_1745	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPD_1747	SSF56104	SAICAR synthase-like
RPD_1748	SSF82697	PurS-like
RPD_1749	SSF52317	Class I glutamine amidotransferase-like
RPD_1750	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_1751	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPD_1752	SSF55326	PurM N-terminal domain-like
RPD_1752	SSF56042	PurM C-terminal domain-like
RPD_1755	SSF82657	BolA-like
RPD_1758	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_1759	SSF56436	C-type lectin-like
RPD_1760	SSF52833	Thioredoxin-like
RPD_1761	SSF52949	Macro domain-like
RPD_1762	SSF56601	beta-lactamase/transpeptidase-like
RPD_1764	SSF53383	PLP-dependent transferases
RPD_1765	SSF55174	Alpha-L RNA-binding motif
RPD_1766	SSF52777	CoA-dependent acyltransferases
RPD_1767	SSF51182	RmlC-like cupins
RPD_1768	SSF53681	Aspartate/glutamate racemase
RPD_1769	SSF48557	L-aspartase-like
RPD_1771	SSF51366	Ribulose-phoshate binding barrel
RPD_1772	SSF47473	EF-hand
RPD_1773	SSF56266	DmpA/ArgJ-like
RPD_1775	SSF53822	Periplasmic binding protein-like I
RPD_1776	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1777	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1781	SSF55961	Bet v1-like
RPD_1782	SSF47741	CO dehydrogenase ISP C-domain like
RPD_1782	SSF54292	2Fe-2S ferredoxin-like
RPD_1783	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
RPD_1783	SSF56176	FAD-binding/transporter-associated domain-like
RPD_1784	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1785	SSF53300	vWA-like
RPD_1788	SSF53218	Molybdenum cofactor biosynthesis proteins
RPD_1788	SSF53448	Nucleotide-diphospho-sugar transferases
RPD_1791	SSF46689	Homeodomain-like
RPD_1791	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPD_1792	SSF111369	HlyD-like secretion proteins
RPD_1793	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1795	SSF55073	Nucleotide cyclase
RPD_1799	SSF117396	TM1631-like
RPD_1800	SSF53448	Nucleotide-diphospho-sugar transferases
RPD_1802	SSF51905	FAD/NAD(P)-binding domain
RPD_1802	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RPD_1805	SSF53613	Ribokinase-like
RPD_1806	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPD_1807	SSF48264	Cytochrome P450
RPD_1808	SSF46689	Homeodomain-like
RPD_1809	SSF111369	HlyD-like secretion proteins
RPD_1810	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPD_1810	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPD_1810	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPD_1811	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1812	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1813	SSF161098	MetI-like
RPD_1814	SSF161098	MetI-like
RPD_1815	SSF53850	Periplasmic binding protein-like II
RPD_1816	SSF51905	FAD/NAD(P)-binding domain
RPD_1816	SSF54373	FAD-linked reductases, C-terminal domain
RPD_1818	SSF53474	alpha/beta-Hydrolases
RPD_1819	SSF53474	alpha/beta-Hydrolases
RPD_1820	SSF48264	Cytochrome P450
RPD_1820	SSF52218	Flavoproteins
RPD_1820	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
RPD_1820	SSF63380	Riboflavin synthase domain-like
RPD_1823	SSF46689	Homeodomain-like
RPD_1823	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPD_1824	SSF47240	Ferritin-like
RPD_1826	SSF47240	Ferritin-like
RPD_1827	SSF117916	Fe-S cluster assembly (FSCA) domain-like
RPD_1828	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
RPD_1828	SSF54292	2Fe-2S ferredoxin-like
RPD_1828	SSF63380	Riboflavin synthase domain-like
RPD_1829	SSF56801	Acetyl-CoA synthetase-like
RPD_1830	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_1831	SSF52096	ClpP/crotonase
RPD_1832	SSF53720	ALDH-like
RPD_1832	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_1835	SSF53474	alpha/beta-Hydrolases
RPD_1835	SSF82784	OsmC-like
RPD_1836	SSF48264	Cytochrome P450
RPD_1837	SSF54862	4Fe-4S ferredoxins
RPD_1838	SSF75304	Amidase signature (AS) enzymes
RPD_1839	SSF90123	ABC transporter transmembrane region
RPD_1840	SSF51445	(Trans)glycosidases
RPD_1841	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPD_1843	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1843	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RPD_1844	SSF53187	Zn-dependent exopeptidases
RPD_1844	SSF55031	Bacterial exopeptidase dimerisation domain
RPD_1845	SSF46785	"Winged helix" DNA-binding domain
RPD_1845	SSF53850	Periplasmic binding protein-like II
RPD_1846	SSF160920	PSTPO5379-like
RPD_1847	SSF53822	Periplasmic binding protein-like I
RPD_1850	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1851	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1853	SSF53639	AraD/HMP-PK domain-like
RPD_1854	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPD_1854	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1855	SSF51658	Xylose isomerase-like
RPD_1856	SSF142764	YgbK-like
RPD_1857	SSF158472	HAMP domain-like
RPD_1857	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPD_1858	SSF53901	Thiolase-like
RPD_1859	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
RPD_1860	SSF51905	FAD/NAD(P)-binding domain
RPD_1861	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1862	SSF52096	ClpP/crotonase
RPD_1863	SSF56112	Protein kinase-like (PK-like)
RPD_1865	SSF52096	ClpP/crotonase
RPD_1866	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_1866	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_1867	SSF158472	HAMP domain-like
RPD_1867	SSF55785	PYP-like sensor domain (PAS domain)
RPD_1867	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPD_1868	SSF56801	Acetyl-CoA synthetase-like
RPD_1869	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1870	SSF52096	ClpP/crotonase
RPD_1871	SSF56801	Acetyl-CoA synthetase-like
RPD_1872	SSF103190	Sensory domain-like
RPD_1872	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_1872	SSF52172	CheY-like
RPD_1872	SSF55785	PYP-like sensor domain (PAS domain)
RPD_1872	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_1873	SSF46785	"Winged helix" DNA-binding domain
RPD_1873	SSF53850	Periplasmic binding protein-like II
RPD_1876	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPD_1877	SSF103088	OmpA-like
RPD_1878	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1879	SSF53901	Thiolase-like
RPD_1880	SSF50249	Nucleic acid-binding proteins
RPD_1881	SSF75304	Amidase signature (AS) enzymes
RPD_1882	SSF56529	FAH
RPD_1883	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_1884	SSF51905	FAD/NAD(P)-binding domain
RPD_1884	SSF54373	FAD-linked reductases, C-terminal domain
RPD_1886	SSF52096	ClpP/crotonase
RPD_1887	SSF56801	Acetyl-CoA synthetase-like
RPD_1888	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_1889	SSF53822	Periplasmic binding protein-like I
RPD_1890	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1891	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1893	SSF46785	"Winged helix" DNA-binding domain
RPD_1894	SSF141868	EAL domain-like
RPD_1894	SSF55073	Nucleotide cyclase
RPD_1894	SSF55785	PYP-like sensor domain (PAS domain)
RPD_1895	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_1897	SSF82544	GckA/TtuD-like
RPD_1898	SSF53822	Periplasmic binding protein-like I
RPD_1899	SSF52141	Uracil-DNA glycosylase-like
RPD_1900	SSF102114	Radical SAM enzymes
RPD_1900	SSF47781	RuvA domain 2-like
RPD_1901	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1902	SSF56672	DNA/RNA polymerases
RPD_1904	SSF89796	CoA-transferase family III (CaiB/BaiF)
RPD_1907	SSF56954	Outer membrane efflux proteins (OEP)
RPD_1908	SSF52096	ClpP/crotonase
RPD_1910	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPD_1910	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPD_1914	SSF55073	Nucleotide cyclase
RPD_1915	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPD_1915	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPD_1918	SSF158472	HAMP domain-like
RPD_1918	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPD_1919	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPD_1920	SSF51126	Pectin lyase-like
RPD_1921	SSF53182	Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
RPD_1922	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1923	SSF55961	Bet v1-like
RPD_1926	SSF81301	Nucleotidyltransferase
RPD_1927	SSF51703	Cobalamin (vitamin B12)-dependent enzymes
RPD_1927	SSF52242	Cobalamin (vitamin B12)-binding domain
RPD_1928	SSF51316	Mss4-like
RPD_1929	SSF51703	Cobalamin (vitamin B12)-dependent enzymes
RPD_1929	SSF52242	Cobalamin (vitamin B12)-binding domain
RPD_1930	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
RPD_1931	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RPD_1932	SSF51717	Dihydropteroate synthetase-like
RPD_1936	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1937	SSF53187	Zn-dependent exopeptidases
RPD_1938	SSF53639	AraD/HMP-PK domain-like
RPD_1942	SSF82649	SufE/NifU
RPD_1944	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_1944	SSF55785	PYP-like sensor domain (PAS domain)
RPD_1944	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_1945	SSF47090	PGBD-like
RPD_1948	SSF88713	Glycoside hydrolase/deacetylase
RPD_1952	SSF160935	VPA0735-like
RPD_1953	SSF53955	Lysozyme-like
RPD_1953	SSF56601	beta-lactamase/transpeptidase-like
RPD_1954	SSF46785	"Winged helix" DNA-binding domain
RPD_1954	SSF48452	TPR-like
RPD_1954	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1956	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPD_1958	SSF103473	MFS general substrate transporter
RPD_1959	SSF53850	Periplasmic binding protein-like II
RPD_1965	SSF82771	GIY-YIG endonuclease
RPD_1969	SSF50789	Herpes virus serine proteinase, assemblin
RPD_1970	SSF56563	Major capsid protein gp5
RPD_1971	SSF88697	PUA domain-like
RPD_1972	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_1973	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_1979	SSF50494	Trypsin-like serine proteases
RPD_1988	SSF55920	Creatinase/aminopeptidase
RPD_1989	SSF46689	Homeodomain-like
RPD_1989	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPD_1992	SSF54001	Cysteine proteinases
RPD_1993	SSF51445	(Trans)glycosidases
RPD_1995	SSF53955	Lysozyme-like
RPD_1997	SSF46894	C-terminal effector domain of the bipartite response regulators
RPD_1997	SSF52172	CheY-like
RPD_1998	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_2001	SSF48452	TPR-like
RPD_2002	SSF82093	Heme chaperone CcmE
RPD_2006	SSF55486	Metalloproteases ("zincins"), catalytic domain
RPD_2009	SSF47240	Ferritin-like
RPD_2010	SSF47240	Ferritin-like
RPD_2010	SSF54292	2Fe-2S ferredoxin-like
RPD_2011	SSF50156	PDZ domain-like
RPD_2011	SSF50494	Trypsin-like serine proteases
RPD_2012	SSF52172	CheY-like
RPD_2013	SSF158472	HAMP domain-like
RPD_2013	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_2013	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_2014	SSF81301	Nucleotidyltransferase
RPD_2014	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
RPD_2016	SSF46689	Homeodomain-like
RPD_2017	SSF103515	Autotransporter
RPD_2017	SSF52743	Subtilisin-like
RPD_2018	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_2018	SSF55785	PYP-like sensor domain (PAS domain)
RPD_2018	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_2019	SSF160240	Cation efflux protein cytoplasmic domain-like
RPD_2019	SSF161111	Cation efflux protein transmembrane domain-like
RPD_2020	SSF50129	GroES-like
RPD_2020	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2021	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
RPD_2022	SSF56529	FAH
RPD_2023	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPD_2023	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2027	SSF89796	CoA-transferase family III (CaiB/BaiF)
RPD_2028	SSF46785	"Winged helix" DNA-binding domain
RPD_2028	SSF48008	GntR ligand-binding domain-like
RPD_2030	SSF56281	Metallo-hydrolase/oxidoreductase
RPD_2031	SSF48613	Heme oxygenase-like
RPD_2033	SSF102114	Radical SAM enzymes
RPD_2034	SSF50129	GroES-like
RPD_2034	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2035	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2036	SSF46689	Homeodomain-like
RPD_2036	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPD_2037	SSF111369	HlyD-like secretion proteins
RPD_2038	SSF111369	HlyD-like secretion proteins
RPD_2039	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPD_2039	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPD_2039	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPD_2041	SSF52151	FabD/lysophospholipase-like
RPD_2043	SSF51395	FMN-linked oxidoreductases
RPD_2044	SSF50630	Acid proteases
RPD_2046	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_2046	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_2047	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPD_2047	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2048	SSF117916	Fe-S cluster assembly (FSCA) domain-like
RPD_2048	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2052	SSF102114	Radical SAM enzymes
RPD_2054	SSF56784	HAD-like
RPD_2055	SSF100950	NagB/RpiA/CoA transferase-like
RPD_2055	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
RPD_2057	SSF51905	FAD/NAD(P)-binding domain
RPD_2057	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RPD_2058	SSF51569	Aldolase
RPD_2060	SSF52402	Adenine nucleotide alpha hydrolases-like
RPD_2060	SSF56317	Carbon-nitrogen hydrolase
RPD_2061	SSF88723	PIN domain-like
RPD_2062	SSF89447	AbrB/MazE/MraZ-like
RPD_2065	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPD_2065	SSF52374	Nucleotidylyl transferase
RPD_2068	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_2069	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
RPD_2069	SSF51569	Aldolase
RPD_2070	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPD_2071	SSF55103	FAD-linked oxidases, C-terminal domain
RPD_2071	SSF56176	FAD-binding/transporter-associated domain-like
RPD_2072	SSF46626	Cytochrome c
RPD_2073	SSF102405	MCP/YpsA-like
RPD_2074	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2074	SSF90123	ABC transporter transmembrane region
RPD_2077	SSF89562	RraA-like
RPD_2079	SSF103088	OmpA-like
RPD_2080	SSF52821	Rhodanese/Cell cycle control phosphatase
RPD_2081	SSF53383	PLP-dependent transferases
RPD_2082	SSF53850	Periplasmic binding protein-like II
RPD_2083	SSF102114	Radical SAM enzymes
RPD_2086	SSF50129	GroES-like
RPD_2086	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2087	SSF53901	Thiolase-like
RPD_2088	SSF53901	Thiolase-like
RPD_2089	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_2090	SSF47336	ACP-like
RPD_2093	SSF69118	AhpD-like
RPD_2094	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2095	SSF64288	Chorismate lyase-like
RPD_2096	SSF56784	HAD-like
RPD_2097	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2098	SSF52467	DHS-like NAD/FAD-binding domain
RPD_2098	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPD_2099	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPD_2100	SSF55021	ACT-like
RPD_2102	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPD_2102	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2103	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2104	SSF161098	MetI-like
RPD_2104	SSF53850	Periplasmic binding protein-like II
RPD_2105	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2106	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2107	SSF161098	MetI-like
RPD_2108	SSF53850	Periplasmic binding protein-like II
RPD_2109	SSF55811	Nudix
RPD_2111	SSF102114	Radical SAM enzymes
RPD_2112	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
RPD_2112	SSF51569	Aldolase
RPD_2122	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2126	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2126	SSF56112	Protein kinase-like (PK-like)
RPD_2129	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_2131	SSF160240	Cation efflux protein cytoplasmic domain-like
RPD_2131	SSF161111	Cation efflux protein transmembrane domain-like
RPD_2132	SSF56300	Metallo-dependent phosphatases
RPD_2134	SSF46785	"Winged helix" DNA-binding domain
RPD_2137	SSF56784	HAD-like
RPD_2137	SSF81653	Calcium ATPase, transduction domain A
RPD_2137	SSF81665	Calcium ATPase, transmembrane domain M
RPD_2138	SSF117143	Flagellar hook protein flgE
RPD_2140	SSF46785	"Winged helix" DNA-binding domain
RPD_2142	SSF56954	Outer membrane efflux proteins (OEP)
RPD_2143	SSF111369	HlyD-like secretion proteins
RPD_2144	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPD_2144	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPD_2144	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPD_2157	SSF56300	Metallo-dependent phosphatases
RPD_2161	SSF50249	Nucleic acid-binding proteins
RPD_2161	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
RPD_2174	SSF46894	C-terminal effector domain of the bipartite response regulators
RPD_2174	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
RPD_2175	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_2179	SSF56300	Metallo-dependent phosphatases
RPD_2182	SSF56349	DNA breaking-rejoining enzymes
RPD_2183	SSF53850	Periplasmic binding protein-like II
RPD_2184	SSF161098	MetI-like
RPD_2185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2188	SSF160467	PH0987 N-terminal domain-like
RPD_2188	SSF50891	Cyclophilin-like
RPD_2188	SSF51230	Single hybrid motif
RPD_2188	SSF51246	Rudiment single hybrid motif
RPD_2188	SSF52440	PreATP-grasp domain
RPD_2188	SSF56059	Glutathione synthetase ATP-binding domain-like
RPD_2189	SSF158832	Tex N-terminal region-like
RPD_2189	SSF47781	RuvA domain 2-like
RPD_2189	SSF50249	Nucleic acid-binding proteins
RPD_2189	SSF53098	Ribonuclease H-like
RPD_2194	SSF52096	ClpP/crotonase
RPD_2196	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_2196	SSF52172	CheY-like
RPD_2196	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_2197	SSF46626	Cytochrome c
RPD_2198	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_2198	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_2199	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_2199	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_2200	SSF47616	GST C-terminal domain-like
RPD_2200	SSF52833	Thioredoxin-like
RPD_2201	SSF46689	Homeodomain-like
RPD_2203	SSF56801	Acetyl-CoA synthetase-like
RPD_2204	SSF52096	ClpP/crotonase
RPD_2205	SSF51230	Single hybrid motif
RPD_2205	SSF51246	Rudiment single hybrid motif
RPD_2205	SSF52440	PreATP-grasp domain
RPD_2205	SSF56059	Glutathione synthetase ATP-binding domain-like
RPD_2206	SSF52096	ClpP/crotonase
RPD_2207	SSF56801	Acetyl-CoA synthetase-like
RPD_2209	SSF56601	beta-lactamase/transpeptidase-like
RPD_2210	SSF49482	Aromatic compound dioxygenase
RPD_2211	SSF51430	NAD(P)-linked oxidoreductase
RPD_2212	SSF103481	Multidrug resistance efflux transporter EmrE
RPD_2213	SSF46785	"Winged helix" DNA-binding domain
RPD_2213	SSF54909	Dimeric alpha+beta barrel
RPD_2214	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPD_2214	SSF52922	TK C-terminal domain-like
RPD_2215	SSF53720	ALDH-like
RPD_2216	SSF143975	IlvD/EDD N-terminal domain-like
RPD_2216	SSF52016	LeuD/IlvD-like
RPD_2218	SSF52833	Thioredoxin-like
RPD_2222	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2223	SSF46785	"Winged helix" DNA-binding domain
RPD_2224	SSF101327	YgfB-like
RPD_2224	SSF103642	Sec-C motif
RPD_2226	SSF47413	lambda repressor-like DNA-binding domains
RPD_2227	SSF48592	GroEL equatorial domain-like
RPD_2227	SSF52029	GroEL apical domain-like
RPD_2227	SSF54849	GroEL-intermediate domain like
RPD_2228	SSF50129	GroES-like
RPD_2231	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2233	SSF51649	RuBisCo, C-terminal domain
RPD_2233	SSF54966	RuBisCO, large subunit, small (N-terminal) domain
RPD_2234	SSF51182	RmlC-like cupins
RPD_2235	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2236	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_2237	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPD_2238	SSF54001	Cysteine proteinases
RPD_2240	SSF56059	Glutathione synthetase ATP-binding domain-like
RPD_2241	SSF53218	Molybdenum cofactor biosynthesis proteins
RPD_2242	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_2243	SSF53271	PRTase-like
RPD_2245	SSF51726	UROD/MetE-like
RPD_2246	SSF47616	GST C-terminal domain-like
RPD_2246	SSF52833	Thioredoxin-like
RPD_2247	SSF52833	Thioredoxin-like
RPD_2248	SSF50129	GroES-like
RPD_2248	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2249	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_2250	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2251	SSF160996	HI0933 insert domain-like
RPD_2251	SSF51905	FAD/NAD(P)-binding domain
RPD_2252	SSF51419	PLP-binding barrel
RPD_2253	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2255	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_2256	SSF53822	Periplasmic binding protein-like I
RPD_2257	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
RPD_2257	SSF56003	Molybdenum cofactor-binding domain
RPD_2258	SSF53067	Actin-like ATPase domain
RPD_2259	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_2260	SSF103473	MFS general substrate transporter
RPD_2264	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
RPD_2264	SSF54631	CBS-domain pair
RPD_2265	SSF50129	GroES-like
RPD_2265	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2267	SSF161084	MAPEG domain-like
RPD_2268	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_2269	SSF52317	Class I glutamine amidotransferase-like
RPD_2269	SSF52402	Adenine nucleotide alpha hydrolases-like
RPD_2269	SSF54810	GMP synthetase C-terminal dimerisation domain
RPD_2271	SSF56349	DNA breaking-rejoining enzymes
RPD_2276	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2278	SSF46689	Homeodomain-like
RPD_2279	SSF110849	ParB/Sulfiredoxin
RPD_2280	SSF47413	lambda repressor-like DNA-binding domains
RPD_2281	SSF53271	PRTase-like
RPD_2283	SSF143081	BB1717-like
RPD_2284	SSF143081	BB1717-like
RPD_2286	SSF50494	Trypsin-like serine proteases
RPD_2288	SSF52129	Caspase-like
RPD_2289	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2290	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2292	SSF52151	FabD/lysophospholipase-like
RPD_2295	SSF47413	lambda repressor-like DNA-binding domains
RPD_2298	SSF48452	TPR-like
RPD_2299	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2300	SSF53383	PLP-dependent transferases
RPD_2301	SSF53383	PLP-dependent transferases
RPD_2302	SSF53613	Ribokinase-like
RPD_2304	SSF46785	"Winged helix" DNA-binding domain
RPD_2304	SSF53383	PLP-dependent transferases
RPD_2305	SSF53383	PLP-dependent transferases
RPD_2306	SSF51419	PLP-binding barrel
RPD_2307	SSF46955	Putative DNA-binding domain
RPD_2308	SSF55008	HMA, heavy metal-associated domain
RPD_2308	SSF56784	HAD-like
RPD_2308	SSF81653	Calcium ATPase, transduction domain A
RPD_2308	SSF81665	Calcium ATPase, transmembrane domain M
RPD_2309	SSF55008	HMA, heavy metal-associated domain
RPD_2310	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPD_2310	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPD_2310	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPD_2311	SSF111369	HlyD-like secretion proteins
RPD_2312	SSF53790	Tetrapyrrole methylase
RPD_2313	SSF52317	Class I glutamine amidotransferase-like
RPD_2313	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2314	SSF53790	Tetrapyrrole methylase
RPD_2315	SSF159664	CobE/GbiG C-terminal domain-like
RPD_2316	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_2316	SSF53790	Tetrapyrrole methylase
RPD_2318	SSF53790	Tetrapyrrole methylase
RPD_2319	SSF53790	Tetrapyrrole methylase
RPD_2320	SSF63965	Precorrin-8X methylmutase CbiC/CobH
RPD_2322	SSF103501	Respiratory nitrate reductase 1 gamma chain
RPD_2323	SSF51905	FAD/NAD(P)-binding domain
RPD_2323	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
RPD_2324	SSF52733	Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
RPD_2326	SSF53790	Tetrapyrrole methylase
RPD_2327	SSF50800	PK beta-barrel domain-like
RPD_2327	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPD_2328	SSF52833	Thioredoxin-like
RPD_2329	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2330	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2336	SSF103481	Multidrug resistance efflux transporter EmrE
RPD_2337	SSF50447	Translation proteins
RPD_2337	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2337	SSF54980	EF-G C-terminal domain-like
RPD_2339	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2341	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2342	SSF46689	Homeodomain-like
RPD_2344	SSF48452	TPR-like
RPD_2345	SSF56925	OMPA-like
RPD_2346	SSF55073	Nucleotide cyclase
RPD_2347	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_2347	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_2348	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2349	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RPD_2350	SSF53807	"Helical backbone" metal receptor
RPD_2352	SSF102114	Radical SAM enzymes
RPD_2353	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2354	SSF56935	Porins
RPD_2355	SSF54909	Dimeric alpha+beta barrel
RPD_2356	SSF144064	Heme iron utilization protein-like
RPD_2359	SSF74653	TolA/TonB C-terminal domain
RPD_2360	SSF46785	"Winged helix" DNA-binding domain
RPD_2360	SSF55781	GAF domain-like
RPD_2361	SSF53822	Periplasmic binding protein-like I
RPD_2364	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2365	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2366	SSF53383	PLP-dependent transferases
RPD_2368	SSF53067	Actin-like ATPase domain
RPD_2370	SSF64518	Phase 1 flagellin
RPD_2372	SSF46894	C-terminal effector domain of the bipartite response regulators
RPD_2373	SSF46894	C-terminal effector domain of the bipartite response regulators
RPD_2374	SSF56281	Metallo-hydrolase/oxidoreductase
RPD_2375	SSF52833	Thioredoxin-like
RPD_2377	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_2377	SSF55781	GAF domain-like
RPD_2377	SSF55785	PYP-like sensor domain (PAS domain)
RPD_2377	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_2378	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2378	SSF81324	Voltage-gated potassium channels
RPD_2380	SSF51905	FAD/NAD(P)-binding domain
RPD_2382	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_2383	SSF46785	"Winged helix" DNA-binding domain
RPD_2384	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_2385	SSF53146	Nitrogenase accessory factor-like
RPD_2387	SSF47175	Cytochromes
RPD_2389	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2389	SSF90123	ABC transporter transmembrane region
RPD_2391	SSF56918	Light-harvesting complex subunits
RPD_2392	SSF56918	Light-harvesting complex subunits
RPD_2393	SSF52172	CheY-like
RPD_2398	SSF103473	MFS general substrate transporter
RPD_2399	SSF56918	Light-harvesting complex subunits
RPD_2400	SSF56918	Light-harvesting complex subunits
RPD_2401	SSF46894	C-terminal effector domain of the bipartite response regulators
RPD_2401	SSF52172	CheY-like
RPD_2402	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_2402	SSF55781	GAF domain-like
RPD_2402	SSF55785	PYP-like sensor domain (PAS domain)
RPD_2402	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_2403	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_2403	SSF55781	GAF domain-like
RPD_2403	SSF55785	PYP-like sensor domain (PAS domain)
RPD_2403	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_2404	SSF52172	CheY-like
RPD_2405	SSF52172	CheY-like
RPD_2405	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_2406	SSF46689	Homeodomain-like
RPD_2408	SSF101478	ADP-ribosylglycohydrolase
RPD_2410	SSF141371	PilZ domain-like
RPD_2412	SSF47598	Ribbon-helix-helix
RPD_2412	SSF55021	ACT-like
RPD_2413	SSF56935	Porins
RPD_2415	SSF48435	Bacterial muramidases
RPD_2415	SSF53955	Lysozyme-like
RPD_2416	SSF103481	Multidrug resistance efflux transporter EmrE
RPD_2419	SSF51445	(Trans)glycosidases
RPD_2420	SSF53474	alpha/beta-Hydrolases
RPD_2421	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2423	SSF50494	Trypsin-like serine proteases
RPD_2425	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_2427	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_2428	SSF52172	CheY-like
RPD_2428	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_2429	SSF52172	CheY-like
RPD_2430	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_2430	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_2431	SSF51246	Rudiment single hybrid motif
RPD_2431	SSF52440	PreATP-grasp domain
RPD_2431	SSF56059	Glutathione synthetase ATP-binding domain-like
RPD_2432	SSF51230	Single hybrid motif
RPD_2433	SSF52304	Type II 3-dehydroquinate dehydratase
RPD_2436	SSF52833	Thioredoxin-like
RPD_2437	SSF52833	Thioredoxin-like
RPD_2439	SSF48452	TPR-like
RPD_2440	SSF53383	PLP-dependent transferases
RPD_2441	SSF118215	Proton glutamate symport protein
RPD_2442	SSF50249	Nucleic acid-binding proteins
RPD_2443	SSF53187	Zn-dependent exopeptidases
RPD_2444	SSF53955	Lysozyme-like
RPD_2444	SSF56601	beta-lactamase/transpeptidase-like
RPD_2445	SSF75620	Release factor
RPD_2447	SSF51261	Duplicated hybrid motif
RPD_2448	SSF52833	Thioredoxin-like
RPD_2450	SSF81342	Transmembrane di-heme cytochromes
RPD_2451	SSF103473	MFS general substrate transporter
RPD_2452	SSF52374	Nucleotidylyl transferase
RPD_2452	SSF55174	Alpha-L RNA-binding motif
RPD_2453	SSF53067	Actin-like ATPase domain
RPD_2454	SSF53474	alpha/beta-Hydrolases
RPD_2455	SSF53383	PLP-dependent transferases
RPD_2456	SSF101960	Stabilizer of iron transporter SufD
RPD_2457	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2458	SSF101960	Stabilizer of iron transporter SufD
RPD_2459	SSF53383	PLP-dependent transferases
RPD_2460	SSF117916	Fe-S cluster assembly (FSCA) domain-like
RPD_2461	SSF89360	HesB-like domain
RPD_2462	SSF55073	Nucleotide cyclase
RPD_2463	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2464	SSF46689	Homeodomain-like
RPD_2465	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPD_2466	SSF52129	Caspase-like
RPD_2467	SSF81338	Aquaporin-like
RPD_2468	SSF48452	TPR-like
RPD_2468	SSF52129	Caspase-like
RPD_2471	SSF53474	alpha/beta-Hydrolases
RPD_2473	SSF46785	"Winged helix" DNA-binding domain
RPD_2473	SSF53850	Periplasmic binding protein-like II
RPD_2474	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPD_2475	SSF53822	Periplasmic binding protein-like I
RPD_2476	SSF46785	"Winged helix" DNA-binding domain
RPD_2476	SSF50331	MOP-like
RPD_2478	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2479	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RPD_2480	SSF53807	"Helical backbone" metal receptor
RPD_2481	SSF118196	YaeB-like
RPD_2482	SSF56935	Porins
RPD_2484	SSF54211	Ribosomal protein S5 domain 2-like
RPD_2484	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_2484	SSF56719	Type II DNA topoisomerase
RPD_2486	SSF56281	Metallo-hydrolase/oxidoreductase
RPD_2487	SSF50475	FMN-binding split barrel
RPD_2488	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2488	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPD_2489	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_2490	SSF102114	Radical SAM enzymes
RPD_2492	SSF53474	alpha/beta-Hydrolases
RPD_2494	SSF53383	PLP-dependent transferases
RPD_2495	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2495	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPD_2496	SSF56655	Carbohydrate phosphatase
RPD_2497	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_2498	SSF56784	HAD-like
RPD_2499	SSF64182	DHH phosphoesterases
RPD_2502	SSF47090	PGBD-like
RPD_2502	SSF53955	Lysozyme-like
RPD_2503	SSF51261	Duplicated hybrid motif
RPD_2504	SSF50104	Translation proteins SH3-like domain
RPD_2504	SSF50249	Nucleic acid-binding proteins
RPD_2505	SSF55681	Class II aaRS and biotin synthetases
RPD_2506	SSF102114	Radical SAM enzymes
RPD_2510	SSF52172	CheY-like
RPD_2511	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_2512	SSF103515	Autotransporter
RPD_2513	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RPD_2513	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_2513	SSF52172	CheY-like
RPD_2513	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_2514	SSF46894	C-terminal effector domain of the bipartite response regulators
RPD_2514	SSF52172	CheY-like
RPD_2515	SSF46785	"Winged helix" DNA-binding domain
RPD_2515	SSF51206	cAMP-binding domain-like
RPD_2516	SSF53649	Alkaline phosphatase-like
RPD_2518	SSF111369	HlyD-like secretion proteins
RPD_2519	SSF81338	Aquaporin-like
RPD_2520	SSF53850	Periplasmic binding protein-like II
RPD_2520	SSF53955	Lysozyme-like
RPD_2522	SSF53649	Alkaline phosphatase-like
RPD_2524	SSF53474	alpha/beta-Hydrolases
RPD_2526	SSF48452	TPR-like
RPD_2526	SSF48695	Multiheme cytochromes
RPD_2527	SSF141371	PilZ domain-like
RPD_2528	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPD_2529	SSF52467	DHS-like NAD/FAD-binding domain
RPD_2530	SSF50249	Nucleic acid-binding proteins
RPD_2534	SSF52096	ClpP/crotonase
RPD_2535	SSF51230	Single hybrid motif
RPD_2535	SSF51246	Rudiment single hybrid motif
RPD_2535	SSF52440	PreATP-grasp domain
RPD_2535	SSF56059	Glutathione synthetase ATP-binding domain-like
RPD_2536	SSF51569	Aldolase
RPD_2540	SSF54534	FKBP-like
RPD_2544	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPD_2545	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_2546	SSF53448	Nucleotide-diphospho-sugar transferases
RPD_2549	SSF56281	Metallo-hydrolase/oxidoreductase
RPD_2551	SSF48239	Terpenoid cyclases/Protein prenyltransferases
RPD_2552	SSF53955	Lysozyme-like
RPD_2552	SSF56601	beta-lactamase/transpeptidase-like
RPD_2554	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
RPD_2555	SSF53448	Nucleotide-diphospho-sugar transferases
RPD_2557	SSF53383	PLP-dependent transferases
RPD_2558	SSF53850	Periplasmic binding protein-like II
RPD_2559	SSF161098	MetI-like
RPD_2560	SSF161098	MetI-like
RPD_2561	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2564	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPD_2565	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_2567	SSF51905	FAD/NAD(P)-binding domain
RPD_2568	SSF56954	Outer membrane efflux proteins (OEP)
RPD_2569	SSF111369	HlyD-like secretion proteins
RPD_2570	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPD_2570	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPD_2570	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPD_2571	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPD_2571	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPD_2571	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPD_2576	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_2577	SSF56954	Outer membrane efflux proteins (OEP)
RPD_2579	SSF46589	tRNA-binding arm
RPD_2579	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPD_2579	SSF50677	ValRS/IleRS/LeuRS editing domain
RPD_2579	SSF52374	Nucleotidylyl transferase
RPD_2581	SSF50486	FMT C-terminal domain-like
RPD_2583	SSF50486	FMT C-terminal domain-like
RPD_2584	SSF102114	Radical SAM enzymes
RPD_2585	SSF55961	Bet v1-like
RPD_2586	SSF142433	CinA-like
RPD_2587	SSF53448	Nucleotide-diphospho-sugar transferases
RPD_2587	SSF69765	IpsF-like
RPD_2588	SSF51395	FMN-linked oxidoreductases
RPD_2589	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_2589	SSF55785	PYP-like sensor domain (PAS domain)
RPD_2589	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_2590	SSF46689	Homeodomain-like
RPD_2590	SSF52172	CheY-like
RPD_2590	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2591	SSF158472	HAMP domain-like
RPD_2591	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_2591	SSF55785	PYP-like sensor domain (PAS domain)
RPD_2591	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_2592	SSF46689	Homeodomain-like
RPD_2592	SSF52172	CheY-like
RPD_2592	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2593	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
RPD_2594	SSF50182	Sm-like ribonucleoproteins
RPD_2595	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2596	SSF101904	GyrA/ParC C-terminal domain-like
RPD_2596	SSF56719	Type II DNA topoisomerase
RPD_2598	SSF52374	Nucleotidylyl transferase
RPD_2599	SSF50891	Cyclophilin-like
RPD_2601	SSF50891	Cyclophilin-like
RPD_2602	SSF111337	QueA-like
RPD_2603	SSF51713	tRNA-guanine transglycosylase
RPD_2606	SSF103481	Multidrug resistance efflux transporter EmrE
RPD_2607	SSF55298	YjgF-like
RPD_2609	SSF56918	Light-harvesting complex subunits
RPD_2610	SSF56918	Light-harvesting complex subunits
RPD_2611	SSF53328	Formyltransferase
RPD_2612	SSF51445	(Trans)glycosidases
RPD_2612	SSF53448	Nucleotide-diphospho-sugar transferases
RPD_2614	SSF51445	(Trans)glycosidases
RPD_2617	SSF51161	Trimeric LpxA-like enzymes
RPD_2617	SSF53448	Nucleotide-diphospho-sugar transferases
RPD_2618	SSF53697	SIS domain
RPD_2618	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPD_2620	SSF50249	Nucleic acid-binding proteins
RPD_2620	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2621	SSF109910	YgfY-like
RPD_2622	SSF141259	CarD-like
RPD_2622	SSF143517	TRCF domain-like
RPD_2622	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2624	SSF56801	Acetyl-CoA synthetase-like
RPD_2625	SSF53850	Periplasmic binding protein-like II
RPD_2627	SSF141255	YccV-like
RPD_2629	SSF51905	FAD/NAD(P)-binding domain
RPD_2632	SSF50129	GroES-like
RPD_2632	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2633	SSF102114	Radical SAM enzymes
RPD_2634	SSF88713	Glycoside hydrolase/deacetylase
RPD_2635	SSF50891	Cyclophilin-like
RPD_2636	SSF160467	PH0987 N-terminal domain-like
RPD_2636	SSF50891	Cyclophilin-like
RPD_2637	SSF89562	RraA-like
RPD_2638	SSF51182	RmlC-like cupins
RPD_2640	SSF51569	Aldolase
RPD_2641	SSF81330	Gated mechanosensitive channel
RPD_2642	SSF74982	Small protein B (SmpB)
RPD_2643	SSF52833	Thioredoxin-like
RPD_2644	SSF52141	Uracil-DNA glycosylase-like
RPD_2646	SSF63562	RPB6/omega subunit-like
RPD_2647	SSF109604	HD-domain/PDEase-like
RPD_2647	SSF55021	ACT-like
RPD_2647	SSF81271	TGS-like
RPD_2647	SSF81301	Nucleotidyltransferase
RPD_2648	SSF63892	Pyridoxine 5'-phosphate synthase
RPD_2649	SSF56214	4'-phosphopantetheinyl transferase
RPD_2650	SSF51306	LexA/Signal peptidase
RPD_2651	SSF54768	dsRNA-binding domain-like
RPD_2651	SSF69065	RNase III domain-like
RPD_2652	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2652	SSF54814	Prokaryotic type KH domain (KH-domain type II)
RPD_2654	SSF50249	Nucleic acid-binding proteins
RPD_2654	SSF57863	ArfGap/RecO-like zinc finger
RPD_2655	SSF101904	GyrA/ParC C-terminal domain-like
RPD_2655	SSF56719	Type II DNA topoisomerase
RPD_2658	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_2660	SSF51569	Aldolase
RPD_2662	SSF56801	Acetyl-CoA synthetase-like
RPD_2663	SSF46785	"Winged helix" DNA-binding domain
RPD_2668	SSF47616	GST C-terminal domain-like
RPD_2668	SSF52833	Thioredoxin-like
RPD_2669	SSF88723	PIN domain-like
RPD_2671	SSF53383	PLP-dependent transferases
RPD_2673	SSF53597	Dihydrofolate reductase-like
RPD_2673	SSF53927	Cytidine deaminase-like
RPD_2674	SSF63380	Riboflavin synthase domain-like
RPD_2675	SSF52121	Lumazine synthase
RPD_2676	SSF48013	NusB-like
RPD_2677	SSF55326	PurM N-terminal domain-like
RPD_2677	SSF56042	PurM C-terminal domain-like
RPD_2679	SSF53474	alpha/beta-Hydrolases
RPD_2680	SSF111369	HlyD-like secretion proteins
RPD_2681	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPD_2681	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPD_2681	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPD_2685	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPD_2686	SSF53901	Thiolase-like
RPD_2687	SSF47729	IHF-like DNA-binding proteins
RPD_2688	SSF46955	Putative DNA-binding domain
RPD_2691	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2694	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2695	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPD_2697	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2698	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_2699	SSF88713	Glycoside hydrolase/deacetylase
RPD_2703	SSF53383	PLP-dependent transferases
RPD_2704	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2705	SSF52096	ClpP/crotonase
RPD_2706	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_2707	SSF52161	Ribosomal protein L13
RPD_2708	SSF54211	Ribosomal protein S5 domain 2-like
RPD_2709	SSF55073	Nucleotide cyclase
RPD_2710	SSF54909	Dimeric alpha+beta barrel
RPD_2712	SSF50685	Barwin-like endoglucanases
RPD_2713	SSF53474	alpha/beta-Hydrolases
RPD_2714	SSF56601	beta-lactamase/transpeptidase-like
RPD_2714	SSF69189	Penicillin-binding protein associated domain
RPD_2715	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2716	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2717	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPD_2717	SSF52374	Nucleotidylyl transferase
RPD_2718	SSF51556	Metallo-dependent hydrolases
RPD_2719	SSF56281	Metallo-hydrolase/oxidoreductase
RPD_2720	SSF56801	Acetyl-CoA synthetase-like
RPD_2723	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPD_2724	SSF53448	Nucleotide-diphospho-sugar transferases
RPD_2725	SSF48452	TPR-like
RPD_2733	SSF53955	Lysozyme-like
RPD_2736	SSF55073	Nucleotide cyclase
RPD_2738	SSF81273	H-NS histone-like proteins
RPD_2740	SSF111369	HlyD-like secretion proteins
RPD_2741	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPD_2741	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPD_2741	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPD_2743	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2744	SSF54909	Dimeric alpha+beta barrel
RPD_2746	SSF56209	Nitrile hydratase alpha chain
RPD_2747	SSF50090	Electron transport accessory proteins
RPD_2748	SSF50090	Electron transport accessory proteins
RPD_2749	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_2750	SSF56601	beta-lactamase/transpeptidase-like
RPD_2751	SSF52402	Adenine nucleotide alpha hydrolases-like
RPD_2752	SSF101386	all-alpha NTP pyrophosphatases
RPD_2753	SSF54631	CBS-domain pair
RPD_2753	SSF56176	FAD-binding/transporter-associated domain-like
RPD_2755	SSF50249	Nucleic acid-binding proteins
RPD_2756	SSF56925	OMPA-like
RPD_2758	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2760	SSF48452	TPR-like
RPD_2762	SSF81324	Voltage-gated potassium channels
RPD_2763	SSF57938	DnaJ/Hsp40 cysteine-rich domain
RPD_2765	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_2766	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_2768	SSF48371	ARM repeat
RPD_2769	SSF46785	"Winged helix" DNA-binding domain
RPD_2770	SSF158634	RPA2825-like
RPD_2773	SSF51905	FAD/NAD(P)-binding domain
RPD_2774	SSF48576	Terpenoid synthases
RPD_2775	SSF64076	MTH938-like
RPD_2776	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPD_2777	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPD_2779	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2780	SSF56925	OMPA-like
RPD_2780	SSF69917	OMPT-like
RPD_2781	SSF51261	Duplicated hybrid motif
RPD_2781	SSF54106	LysM domain
RPD_2782	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_2783	SSF52172	CheY-like
RPD_2784	SSF64167	SurE-like
RPD_2786	SSF55797	PR-1-like
RPD_2787	SSF46589	tRNA-binding arm
RPD_2787	SSF55681	Class II aaRS and biotin synthetases
RPD_2791	SSF46785	"Winged helix" DNA-binding domain
RPD_2793	SSF51445	(Trans)glycosidases
RPD_2794	SSF110997	Sporulation related repeat
RPD_2795	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPD_2795	SSF52374	Nucleotidylyl transferase
RPD_2795	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
RPD_2796	SSF109604	HD-domain/PDEase-like
RPD_2797	SSF89360	HesB-like domain
RPD_2798	SSF103190	Sensory domain-like
RPD_2799	SSF63712	Nicotinic receptor ligand binding domain-like
RPD_2801	SSF47413	lambda repressor-like DNA-binding domains
RPD_2802	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPD_2802	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPD_2802	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPD_2803	SSF111369	HlyD-like secretion proteins
RPD_2804	SSF56219	DNase I-like
RPD_2805	SSF81901	HCP-like
RPD_2806	SSF143975	IlvD/EDD N-terminal domain-like
RPD_2806	SSF52016	LeuD/IlvD-like
RPD_2807	SSF51905	FAD/NAD(P)-binding domain
RPD_2807	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RPD_2808	SSF52980	Restriction endonuclease-like
RPD_2809	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
RPD_2809	SSF51230	Single hybrid motif
RPD_2809	SSF52777	CoA-dependent acyltransferases
RPD_2811	SSF51230	Single hybrid motif
RPD_2811	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPD_2811	SSF52922	TK C-terminal domain-like
RPD_2812	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPD_2815	SSF50129	GroES-like
RPD_2815	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2816	SSF51604	Enolase C-terminal domain-like
RPD_2816	SSF54826	Enolase N-terminal domain-like
RPD_2817	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RPD_2818	SSF141523	L,D-transpeptidase catalytic domain-like
RPD_2819	SSF103473	MFS general substrate transporter
RPD_2820	SSF51569	Aldolase
RPD_2821	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPD_2824	SSF52317	Class I glutamine amidotransferase-like
RPD_2824	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2826	SSF51351	Triosephosphate isomerase (TIM)
RPD_2827	SSF109998	Triger factor/SurA peptide-binding domain-like
RPD_2827	SSF54534	FKBP-like
RPD_2828	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
RPD_2828	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
RPD_2829	SSF51366	Ribulose-phoshate binding barrel
RPD_2830	SSF55040	Molybdenum cofactor biosynthesis protein C, MoaC
RPD_2831	SSF56784	HAD-like
RPD_2831	SSF81653	Calcium ATPase, transduction domain A
RPD_2831	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
RPD_2831	SSF81665	Calcium ATPase, transmembrane domain M
RPD_2833	SSF141371	PilZ domain-like
RPD_2834	SSF103088	OmpA-like
RPD_2835	SSF56784	HAD-like
RPD_2836	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_2838	SSF53218	Molybdenum cofactor biosynthesis proteins
RPD_2838	SSF63867	MoeA C-terminal domain-like
RPD_2838	SSF63882	MoeA N-terminal region -like
RPD_2839	SSF46785	"Winged helix" DNA-binding domain
RPD_2839	SSF51306	LexA/Signal peptidase
RPD_2841	SSF50715	Ribosomal protein L25-like
RPD_2841	SSF52374	Nucleotidylyl transferase
RPD_2842	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
RPD_2842	SSF52374	Nucleotidylyl transferase
RPD_2843	SSF48256	Citrate synthase
RPD_2844	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPD_2846	SSF51161	Trimeric LpxA-like enzymes
RPD_2847	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_2848	SSF51161	Trimeric LpxA-like enzymes
RPD_2850	SSF50156	PDZ domain-like
RPD_2851	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2851	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPD_2851	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
RPD_2853	SSF64005	Undecaprenyl diphosphate synthase
RPD_2854	SSF55194	Ribosome recycling factor, RRF
RPD_2855	SSF53633	Carbamate kinase-like
RPD_2856	SSF46934	UBA-like
RPD_2856	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
RPD_2857	SSF52313	Ribosomal protein S2
RPD_2858	SSF160975	AF1531-like
RPD_2858	SSF89550	PHP domain-like
RPD_2859	SSF102114	Radical SAM enzymes
RPD_2860	SSF46689	Homeodomain-like
RPD_2863	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2865	SSF52954	Class II aaRS ABD-related
RPD_2865	SSF55681	Class II aaRS and biotin synthetases
RPD_2866	SSF110087	DR1885-like metal-binding protein
RPD_2869	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPD_2870	SSF56281	Metallo-hydrolase/oxidoreductase
RPD_2871	SSF50037	C-terminal domain of transcriptional repressors
RPD_2871	SSF55681	Class II aaRS and biotin synthetases
RPD_2877	SSF54862	4Fe-4S ferredoxins
RPD_2879	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
RPD_2879	SSF54292	2Fe-2S ferredoxin-like
RPD_2879	SSF54862	4Fe-4S ferredoxins
RPD_2880	SSF140490	Nqo1C-terminal domain-like
RPD_2880	SSF142019	Nqo1 FMN-binding domain-like
RPD_2880	SSF142984	Nqo1 middle domain-like
RPD_2882	SSF52833	Thioredoxin-like
RPD_2883	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_2884	SSF56762	HydB/Nqo4-like
RPD_2885	SSF143243	Nqo5-like
RPD_2886	SSF56770	HydA/Nqo6-like
RPD_2889	SSF47729	IHF-like DNA-binding proteins
RPD_2890	SSF53187	Zn-dependent exopeptidases
RPD_2890	SSF55031	Bacterial exopeptidase dimerisation domain
RPD_2892	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2892	SSF54211	Ribosomal protein S5 domain 2-like
RPD_2892	SSF88697	PUA domain-like
RPD_2893	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2893	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RPD_2894	SSF52096	ClpP/crotonase
RPD_2895	SSF102735	Trigger factor ribosome-binding domain
RPD_2895	SSF109998	Triger factor/SurA peptide-binding domain-like
RPD_2895	SSF54534	FKBP-like
RPD_2896	SSF49503	Cupredoxins
RPD_2897	SSF52317	Class I glutamine amidotransferase-like
RPD_2897	SSF56322	ADC synthase
RPD_2898	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
RPD_2899	SSF53613	Ribokinase-like
RPD_2899	SSF64153	YjeF N-terminal domain-like
RPD_2900	SSF54913	GlnB-like
RPD_2901	SSF54368	Glutamine synthetase, N-terminal domain
RPD_2901	SSF55931	Glutamine synthetase/guanido kinase
RPD_2902	SSF46689	Homeodomain-like
RPD_2902	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPD_2903	SSF58113	Apolipoprotein A-I
RPD_2905	SSF75304	Amidase signature (AS) enzymes
RPD_2906	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2906	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RPD_2907	SSF50331	MOP-like
RPD_2907	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2908	SSF161098	MetI-like
RPD_2909	SSF161098	MetI-like
RPD_2910	SSF53850	Periplasmic binding protein-like II
RPD_2911	SSF103481	Multidrug resistance efflux transporter EmrE
RPD_2912	SSF51998	PFL-like glycyl radical enzymes
RPD_2912	SSF75625	YebC-like
RPD_2917	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2918	SSF52317	Class I glutamine amidotransferase-like
RPD_2918	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2922	SSF53807	"Helical backbone" metal receptor
RPD_2923	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2924	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RPD_2925	SSF55073	Nucleotide cyclase
RPD_2926	SSF47616	GST C-terminal domain-like
RPD_2926	SSF52833	Thioredoxin-like
RPD_2927	SSF50800	PK beta-barrel domain-like
RPD_2933	SSF81901	HCP-like
RPD_2936	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_2937	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_2938	SSF53187	Zn-dependent exopeptidases
RPD_2938	SSF55031	Bacterial exopeptidase dimerisation domain
RPD_2942	SSF141523	L,D-transpeptidase catalytic domain-like
RPD_2943	SSF88713	Glycoside hydrolase/deacetylase
RPD_2944	SSF53597	Dihydrofolate reductase-like
RPD_2946	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2946	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RPD_2946	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPD_2947	SSF50249	Nucleic acid-binding proteins
RPD_2947	SSF55261	GAD domain-like
RPD_2947	SSF55681	Class II aaRS and biotin synthetases
RPD_2949	SSF47819	HRDC-like
RPD_2949	SSF53098	Ribonuclease H-like
RPD_2951	SSF109604	HD-domain/PDEase-like
RPD_2951	SSF53067	Actin-like ATPase domain
RPD_2952	SSF140356	PPK N-terminal domain-like
RPD_2952	SSF143724	PHP14-like
RPD_2952	SSF56024	Phospholipase D/nuclease
RPD_2953	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2955	SSF55326	PurM N-terminal domain-like
RPD_2955	SSF56042	PurM C-terminal domain-like
RPD_2956	SSF53328	Formyltransferase
RPD_2957	SSF50249	Nucleic acid-binding proteins
RPD_2958	SSF46785	"Winged helix" DNA-binding domain
RPD_2958	SSF51206	cAMP-binding domain-like
RPD_2961	SSF54919	Nucleoside diphosphate kinase, NDK
RPD_2962	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2964	SSF102400	DNA polymerase III chi subunit
RPD_2965	SSF52949	Macro domain-like
RPD_2965	SSF53187	Zn-dependent exopeptidases
RPD_2969	SSF109998	Triger factor/SurA peptide-binding domain-like
RPD_2969	SSF54534	FKBP-like
RPD_2970	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPD_2971	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_2972	SSF50129	GroES-like
RPD_2972	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2974	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2977	SSF53901	Thiolase-like
RPD_2978	SSF47336	ACP-like
RPD_2979	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2983	SSF52151	FabD/lysophospholipase-like
RPD_2983	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
RPD_2984	SSF55073	Nucleotide cyclase
RPD_2985	SSF54995	Ribosomal protein S6
RPD_2986	SSF46911	Ribosomal protein S18
RPD_2988	SSF55653	Ribosomal protein L9 C-domain
RPD_2988	SSF55658	L9 N-domain-like
RPD_2991	SSF48024	N-terminal domain of DnaB helicase
RPD_2991	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2992	SSF50621	Alanine racemase C-terminal domain-like
RPD_2992	SSF51419	PLP-binding barrel
RPD_2995	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_2995	SSF54211	Ribosomal protein S5 domain 2-like
RPD_2997	SSF53271	PRTase-like
RPD_2997	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPD_2998	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_2999	SSF53822	Periplasmic binding protein-like I
RPD_3000	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_3002	SSF88874	Receptor-binding domain of short tail fibre protein gp12
RPD_3003	SSF103515	Autotransporter
RPD_3003	SSF81296	E set domains
RPD_3004	SSF103473	MFS general substrate transporter
RPD_3005	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3008	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPD_3010	SSF53850	Periplasmic binding protein-like II
RPD_3012	SSF81901	HCP-like
RPD_3014	SSF55931	Glutamine synthetase/guanido kinase
RPD_3014	SSF89095	GatB/YqeY motif
RPD_3015	SSF55785	PYP-like sensor domain (PAS domain)
RPD_3015	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_3016	SSF75304	Amidase signature (AS) enzymes
RPD_3018	SSF141000	Glu-tRNAGln amidotransferase C subunit
RPD_3019	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
RPD_3020	SSF102198	Putative cyclase
RPD_3021	SSF46689	Homeodomain-like
RPD_3021	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPD_3022	SSF51905	FAD/NAD(P)-binding domain
RPD_3023	SSF53098	Ribonuclease H-like
RPD_3024	SSF54427	NTF2-like
RPD_3025	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_3025	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_3026	SSF55166	Hedgehog/DD-peptidase
RPD_3027	SSF52467	DHS-like NAD/FAD-binding domain
RPD_3027	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPD_3028	SSF53671	Aspartate/ornithine carbamoyltransferase
RPD_3029	SSF51338	Composite domain of metallo-dependent hydrolases
RPD_3029	SSF51556	Metallo-dependent hydrolases
RPD_3031	SSF102405	MCP/YpsA-like
RPD_3033	SSF56712	Prokaryotic type I DNA topoisomerase
RPD_3033	SSF57783	Zinc beta-ribbon
RPD_3034	SSF50249	Nucleic acid-binding proteins
RPD_3036	SSF55811	Nudix
RPD_3037	SSF57829	Zn-binding ribosomal proteins
RPD_3038	SSF52172	CheY-like
RPD_3038	SSF55073	Nucleotide cyclase
RPD_3039	SSF52172	CheY-like
RPD_3041	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
RPD_3041	SSF56672	DNA/RNA polymerases
RPD_3043	SSF55298	YjgF-like
RPD_3044	SSF51695	PLC-like phosphodiesterases
RPD_3045	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_3046	SSF54197	HIT-like
RPD_3047	SSF118196	YaeB-like
RPD_3050	SSF141371	PilZ domain-like
RPD_3051	SSF53955	Lysozyme-like
RPD_3053	SSF141371	PilZ domain-like
RPD_3055	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3055	SSF81923	Double Clp-N motif
RPD_3056	SSF54736	ClpS-like
RPD_3057	SSF53300	vWA-like
RPD_3058	SSF56601	beta-lactamase/transpeptidase-like
RPD_3059	SSF46565	Chaperone J-domain
RPD_3060	SSF53300	vWA-like
RPD_3061	SSF53474	alpha/beta-Hydrolases
RPD_3062	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3063	SSF52374	Nucleotidylyl transferase
RPD_3064	SSF47473	EF-hand
RPD_3065	SSF56935	Porins
RPD_3066	SSF46785	"Winged helix" DNA-binding domain
RPD_3066	SSF51206	cAMP-binding domain-like
RPD_3070	SSF47616	GST C-terminal domain-like
RPD_3070	SSF52833	Thioredoxin-like
RPD_3071	SSF46785	"Winged helix" DNA-binding domain
RPD_3073	SSF51430	NAD(P)-linked oxidoreductase
RPD_3074	SSF47413	lambda repressor-like DNA-binding domains
RPD_3075	SSF158791	MgtE N-terminal domain-like
RPD_3075	SSF161093	MgtE membrane domain-like
RPD_3075	SSF54631	CBS-domain pair
RPD_3076	SSF88713	Glycoside hydrolase/deacetylase
RPD_3077	SSF88713	Glycoside hydrolase/deacetylase
RPD_3078	SSF143120	YefM-like
RPD_3079	SSF88723	PIN domain-like
RPD_3081	SSF88723	PIN domain-like
RPD_3082	SSF101801	Surface presentation of antigens (SPOA)
RPD_3083	SSF55681	Class II aaRS and biotin synthetases
RPD_3084	SSF103481	Multidrug resistance efflux transporter EmrE
RPD_3085	SSF46689	Homeodomain-like
RPD_3085	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPD_3086	SSF161111	Cation efflux protein transmembrane domain-like
RPD_3087	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_3087	SSF52172	CheY-like
RPD_3087	SSF55785	PYP-like sensor domain (PAS domain)
RPD_3087	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_3088	SSF81342	Transmembrane di-heme cytochromes
RPD_3090	SSF46785	"Winged helix" DNA-binding domain
RPD_3091	SSF54975	Acylphosphatase/BLUF domain-like
RPD_3092	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPD_3093	SSF51230	Single hybrid motif
RPD_3093	SSF51246	Rudiment single hybrid motif
RPD_3093	SSF52440	PreATP-grasp domain
RPD_3093	SSF56059	Glutathione synthetase ATP-binding domain-like
RPD_3098	SSF48173	Cryptochrome/photolyase FAD-binding domain
RPD_3098	SSF52425	Cryptochrome/photolyase, N-terminal domain
RPD_3100	SSF103481	Multidrug resistance efflux transporter EmrE
RPD_3102	SSF46689	Homeodomain-like
RPD_3103	SSF56801	Acetyl-CoA synthetase-like
RPD_3104	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_3105	SSF53901	Thiolase-like
RPD_3106	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_3106	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_3107	SSF158472	HAMP domain-like
RPD_3107	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPD_3109	SSF158472	HAMP domain-like
RPD_3109	SSF55785	PYP-like sensor domain (PAS domain)
RPD_3109	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_3110	SSF46626	Cytochrome c
RPD_3110	SSF50998	Quinoprotein alcohol dehydrogenase-like
RPD_3111	SSF55811	Nudix
RPD_3112	SSF51569	Aldolase
RPD_3113	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_3114	SSF50249	Nucleic acid-binding proteins
RPD_3115	SSF53901	Thiolase-like
RPD_3116	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPD_3116	SSF52922	TK C-terminal domain-like
RPD_3116	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
RPD_3121	SSF53474	alpha/beta-Hydrolases
RPD_3122	SSF52096	ClpP/crotonase
RPD_3124	SSF56601	beta-lactamase/transpeptidase-like
RPD_3125	SSF160544	EscU C-terminal domain-like
RPD_3127	SSF160909	ATP12-like
RPD_3129	SSF55120	Pseudouridine synthase
RPD_3129	SSF55174	Alpha-L RNA-binding motif
RPD_3130	SSF143422	Transposase IS200-like
RPD_3131	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3132	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3135	SSF53822	Periplasmic binding protein-like I
RPD_3136	SSF54197	HIT-like
RPD_3137	SSF47598	Ribbon-helix-helix
RPD_3138	SSF88723	PIN domain-like
RPD_3139	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPD_3139	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPD_3139	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPD_3140	SSF111369	HlyD-like secretion proteins
RPD_3141	SSF46955	Putative DNA-binding domain
RPD_3142	SSF46785	"Winged helix" DNA-binding domain
RPD_3143	SSF54427	NTF2-like
RPD_3144	SSF111038	YjbQ-like
RPD_3146	SSF51182	RmlC-like cupins
RPD_3147	SSF46785	"Winged helix" DNA-binding domain
RPD_3147	SSF53850	Periplasmic binding protein-like II
RPD_3148	SSF50331	MOP-like
RPD_3148	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3149	SSF161098	MetI-like
RPD_3150	SSF161098	MetI-like
RPD_3151	SSF53850	Periplasmic binding protein-like II
RPD_3152	SSF56300	Metallo-dependent phosphatases
RPD_3153	SSF48452	TPR-like
RPD_3154	SSF55469	FMN-dependent nitroreductase-like
RPD_3155	SSF48019	post-AAA+ oligomerization domain-like
RPD_3155	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3156	SSF50156	PDZ domain-like
RPD_3156	SSF50494	Trypsin-like serine proteases
RPD_3157	SSF46785	"Winged helix" DNA-binding domain
RPD_3158	SSF50129	GroES-like
RPD_3158	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_3159	SSF64263	Prokaryotic ribosomal protein L17
RPD_3160	SSF47789	C-terminal domain of RNA polymerase alpha subunit
RPD_3160	SSF55257	RBP11-like subunits of RNA polymerase
RPD_3160	SSF56553	Insert subdomain of RNA polymerase alpha subunit
RPD_3161	SSF53137	Translational machinery components
RPD_3162	SSF46946	S13-like H2TH domain
RPD_3163	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3164	SSF103491	Preprotein translocase SecY subunit
RPD_3165	SSF52080	Ribosomal proteins L15p and L18e
RPD_3166	SSF55129	Ribosomal protein L30p/L7e
RPD_3167	SSF54211	Ribosomal protein S5 domain 2-like
RPD_3167	SSF54768	dsRNA-binding domain-like
RPD_3168	SSF53137	Translational machinery components
RPD_3169	SSF56053	Ribosomal protein L6
RPD_3170	SSF56047	Ribosomal protein S8
RPD_3171	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RPD_3172	SSF55282	RL5-like
RPD_3173	SSF50104	Translation proteins SH3-like domain
RPD_3174	SSF50193	Ribosomal protein L14
RPD_3175	SSF50249	Nucleic acid-binding proteins
RPD_3176	SSF46561	Ribosomal protein L29 (L29p)
RPD_3177	SSF54686	Ribosomal protein L16p/L10e
RPD_3178	SSF54814	Prokaryotic type KH domain (KH-domain type II)
RPD_3178	SSF54821	Ribosomal protein S3 C-terminal domain
RPD_3179	SSF54843	Ribosomal protein L22
RPD_3180	SSF54570	Ribosomal protein S19
RPD_3181	SSF50104	Translation proteins SH3-like domain
RPD_3181	SSF50249	Nucleic acid-binding proteins
RPD_3182	SSF54189	Ribosomal proteins S24e, L23 and L15e
RPD_3183	SSF52166	Ribosomal protein L4
RPD_3184	SSF50447	Translation proteins
RPD_3185	SSF54999	Ribosomal protein S10
RPD_3186	SSF50447	Translation proteins
RPD_3186	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
RPD_3186	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3187	SSF50447	Translation proteins
RPD_3187	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3187	SSF54211	Ribosomal protein S5 domain 2-like
RPD_3187	SSF54980	EF-G C-terminal domain-like
RPD_3188	SSF47973	Ribosomal protein S7
RPD_3189	SSF50249	Nucleic acid-binding proteins
RPD_3191	SSF56935	Porins
RPD_3192	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3192	SSF90123	ABC transporter transmembrane region
RPD_3193	SSF51905	FAD/NAD(P)-binding domain
RPD_3193	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_3193	SSF54373	FAD-linked reductases, C-terminal domain
RPD_3194	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
RPD_3195	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
RPD_3196	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
RPD_3196	SSF54736	ClpS-like
RPD_3197	SSF160369	Ribosomal protein L10-like
RPD_3199	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_3199	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RPD_3200	SSF56808	Ribosomal protein L1
RPD_3201	SSF46906	Ribosomal protein L11, C-terminal domain
RPD_3201	SSF54747	Ribosomal L11/L12e N-terminal domain
RPD_3202	SSF50104	Translation proteins SH3-like domain
RPD_3202	SSF82679	N-utilization substance G protein NusG, N-terminal domain
RPD_3204	SSF50447	Translation proteins
RPD_3204	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
RPD_3204	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3205	SSF56601	beta-lactamase/transpeptidase-like
RPD_3206	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_3207	SSF53254	Phosphoglycerate mutase-like
RPD_3208	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_3209	SSF56112	Protein kinase-like (PK-like)
RPD_3210	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_3210	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_3211	SSF46689	Homeodomain-like
RPD_3211	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPD_3213	SSF51011	Glycosyl hydrolase domain
RPD_3213	SSF51445	(Trans)glycosidases
RPD_3213	SSF81296	E set domains
RPD_3214	SSF54001	Cysteine proteinases
RPD_3217	SSF50156	PDZ domain-like
RPD_3217	SSF50494	Trypsin-like serine proteases
RPD_3218	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3221	SSF53850	Periplasmic binding protein-like II
RPD_3222	SSF56801	Acetyl-CoA synthetase-like
RPD_3223	SSF53850	Periplasmic binding protein-like II
RPD_3224	SSF161098	MetI-like
RPD_3225	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3225	SSF55021	ACT-like
RPD_3226	SSF51161	Trimeric LpxA-like enzymes
RPD_3227	SSF53383	PLP-dependent transferases
RPD_3230	SSF55315	L30e-like
RPD_3230	SSF75217	alpha/beta knot
RPD_3234	SSF56925	OMPA-like
RPD_3236	SSF48452	TPR-like
RPD_3237	SSF111331	NAD kinase/diacylglycerol kinase-like
RPD_3238	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_3241	SSF52172	CheY-like
RPD_3242	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RPD_3244	SSF53955	Lysozyme-like
RPD_3247	SSF141734	HisI-like
RPD_3248	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RPD_3249	SSF82649	SufE/NifU
RPD_3250	SSF52096	ClpP/crotonase
RPD_3252	SSF48452	TPR-like
RPD_3254	SSF53649	Alkaline phosphatase-like
RPD_3255	SSF53474	alpha/beta-Hydrolases
RPD_3256	SSF56634	Heme-dependent catalase-like
RPD_3257	SSF50249	Nucleic acid-binding proteins
RPD_3260	SSF103473	MFS general substrate transporter
RPD_3261	SSF52954	Class II aaRS ABD-related
RPD_3261	SSF55186	ThrRS/AlaRS common domain
RPD_3261	SSF55681	Class II aaRS and biotin synthetases
RPD_3261	SSF81271	TGS-like
RPD_3262	SSF55469	FMN-dependent nitroreductase-like
RPD_3263	SSF141868	EAL domain-like
RPD_3263	SSF55073	Nucleotide cyclase
RPD_3263	SSF55785	PYP-like sensor domain (PAS domain)
RPD_3266	SSF46785	"Winged helix" DNA-binding domain
RPD_3266	SSF51206	cAMP-binding domain-like
RPD_3270	SSF52151	FabD/lysophospholipase-like
RPD_3271	SSF54631	CBS-domain pair
RPD_3272	SSF144091	Rhomboid-like
RPD_3274	SSF46785	"Winged helix" DNA-binding domain
RPD_3274	SSF51206	cAMP-binding domain-like
RPD_3277	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_3277	SSF52172	CheY-like
RPD_3277	SSF55785	PYP-like sensor domain (PAS domain)
RPD_3277	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_3278	SSF141371	PilZ domain-like
RPD_3280	SSF46785	"Winged helix" DNA-binding domain
RPD_3284	SSF51161	Trimeric LpxA-like enzymes
RPD_3288	SSF51161	Trimeric LpxA-like enzymes
RPD_3289	SSF53474	alpha/beta-Hydrolases
RPD_3292	SSF51905	FAD/NAD(P)-binding domain
RPD_3292	SSF54373	FAD-linked reductases, C-terminal domain
RPD_3294	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_3295	SSF53187	Zn-dependent exopeptidases
RPD_3295	SSF55031	Bacterial exopeptidase dimerisation domain
RPD_3296	SSF75304	Amidase signature (AS) enzymes
RPD_3297	SSF52096	ClpP/crotonase
RPD_3298	SSF56801	Acetyl-CoA synthetase-like
RPD_3299	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPD_3299	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_3300	SSF52096	ClpP/crotonase
RPD_3301	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_3301	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_3302	SSF53720	ALDH-like
RPD_3303	SSF46689	Homeodomain-like
RPD_3303	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPD_3304	SSF52096	ClpP/crotonase
RPD_3305	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_3306	SSF53901	Thiolase-like
RPD_3307	SSF103473	MFS general substrate transporter
RPD_3308	SSF46785	"Winged helix" DNA-binding domain
RPD_3308	SSF55781	GAF domain-like
RPD_3310	SSF53850	Periplasmic binding protein-like II
RPD_3312	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_3312	SSF52210	Succinyl-CoA synthetase domains
RPD_3312	SSF56059	Glutathione synthetase ATP-binding domain-like
RPD_3313	SSF50249	Nucleic acid-binding proteins
RPD_3314	SSF53901	Thiolase-like
RPD_3315	SSF89796	CoA-transferase family III (CaiB/BaiF)
RPD_3316	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_3317	SSF56801	Acetyl-CoA synthetase-like
RPD_3318	SSF53901	Thiolase-like
RPD_3319	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_3320	SSF161098	MetI-like
RPD_3321	SSF160964	MalF N-terminal region-like
RPD_3321	SSF161098	MetI-like
RPD_3322	SSF53850	Periplasmic binding protein-like II
RPD_3323	SSF50331	MOP-like
RPD_3323	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3324	SSF143975	IlvD/EDD N-terminal domain-like
RPD_3324	SSF52016	LeuD/IlvD-like
RPD_3325	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_3326	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_3328	SSF46689	Homeodomain-like
RPD_3328	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPD_3329	SSF111369	HlyD-like secretion proteins
RPD_3330	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPD_3330	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPD_3330	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPD_3331	SSF74653	TolA/TonB C-terminal domain
RPD_3335	SSF56935	Porins
RPD_3337	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_3337	SSF52172	CheY-like
RPD_3337	SSF55785	PYP-like sensor domain (PAS domain)
RPD_3337	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_3338	SSF55785	PYP-like sensor domain (PAS domain)
RPD_3341	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPD_3341	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPD_3341	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPD_3342	SSF111369	HlyD-like secretion proteins
RPD_3343	SSF56954	Outer membrane efflux proteins (OEP)
RPD_3345	SSF56276	S-adenosylmethionine decarboxylase
RPD_3346	SSF46785	"Winged helix" DNA-binding domain
RPD_3346	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_3347	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_3348	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_3349	SSF50156	PDZ domain-like
RPD_3349	SSF50494	Trypsin-like serine proteases
RPD_3351	SSF117892	Band 7/SPFH domain
RPD_3352	SSF117892	Band 7/SPFH domain
RPD_3353	SSF53597	Dihydrofolate reductase-like
RPD_3354	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
RPD_3355	SSF53850	Periplasmic binding protein-like II
RPD_3356	SSF53850	Periplasmic binding protein-like II
RPD_3359	SSF101738	SspB-like
RPD_3360	SSF48557	L-aspartase-like
RPD_3364	SSF55103	FAD-linked oxidases, C-terminal domain
RPD_3364	SSF56176	FAD-binding/transporter-associated domain-like
RPD_3365	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_3367	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3368	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_3369	SSF143100	TTHA1013/TTHA0281-like
RPD_3370	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3373	SSF141523	L,D-transpeptidase catalytic domain-like
RPD_3374	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_3375	SSF51905	FAD/NAD(P)-binding domain
RPD_3377	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_3379	SSF53092	Creatinase/prolidase N-terminal domain
RPD_3379	SSF55920	Creatinase/aminopeptidase
RPD_3380	SSF103473	MFS general substrate transporter
RPD_3381	SSF47781	RuvA domain 2-like
RPD_3381	SSF50249	Nucleic acid-binding proteins
RPD_3381	SSF52113	BRCT domain
RPD_3381	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
RPD_3382	SSF82771	GIY-YIG endonuclease
RPD_3383	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3384	SSF48452	TPR-like
RPD_3385	SSF54211	Ribosomal protein S5 domain 2-like
RPD_3386	SSF52490	Tubulin nucleotide-binding domain-like
RPD_3386	SSF55307	Tubulin C-terminal domain-like
RPD_3387	SSF53067	Actin-like ATPase domain
RPD_3389	SSF52440	PreATP-grasp domain
RPD_3389	SSF56059	Glutathione synthetase ATP-binding domain-like
RPD_3392	SSF56176	FAD-binding/transporter-associated domain-like
RPD_3392	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
RPD_3393	SSF51984	MurCD N-terminal domain
RPD_3393	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPD_3393	SSF53623	MurD-like peptide ligases, catalytic domain
RPD_3394	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPD_3396	SSF51984	MurCD N-terminal domain
RPD_3396	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPD_3396	SSF53623	MurD-like peptide ligases, catalytic domain
RPD_3398	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPD_3398	SSF53623	MurD-like peptide ligases, catalytic domain
RPD_3398	SSF63418	MurE/MurF N-terminal domain
RPD_3399	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPD_3399	SSF53623	MurD-like peptide ligases, catalytic domain
RPD_3399	SSF63418	MurE/MurF N-terminal domain
RPD_3400	SSF56519	Penicillin binding protein dimerisation domain
RPD_3400	SSF56601	beta-lactamase/transpeptidase-like
RPD_3402	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_3402	SSF81799	Putative methyltransferase TM0872, insert domain
RPD_3403	SSF47090	PGBD-like
RPD_3403	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
RPD_3404	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3404	SSF90123	ABC transporter transmembrane region
RPD_3405	SSF103473	MFS general substrate transporter
RPD_3406	SSF111369	HlyD-like secretion proteins
RPD_3407	SSF46689	Homeodomain-like
RPD_3407	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPD_3409	SSF103190	Sensory domain-like
RPD_3409	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPD_3411	SSF103515	Autotransporter
RPD_3411	SSF51126	Pectin lyase-like
RPD_3412	SSF46785	"Winged helix" DNA-binding domain
RPD_3412	SSF53850	Periplasmic binding protein-like II
RPD_3413	SSF56784	HAD-like
RPD_3414	SSF46785	"Winged helix" DNA-binding domain
RPD_3416	SSF52833	Thioredoxin-like
RPD_3418	SSF52833	Thioredoxin-like
RPD_3419	SSF52788	Phosphotyrosine protein phosphatases I
RPD_3420	SSF46785	"Winged helix" DNA-binding domain
RPD_3421	SSF46785	"Winged helix" DNA-binding domain
RPD_3422	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_3423	SSF53383	PLP-dependent transferases
RPD_3424	SSF141523	L,D-transpeptidase catalytic domain-like
RPD_3426	SSF50346	PRC-barrel domain
RPD_3428	SSF51905	FAD/NAD(P)-binding domain
RPD_3428	SSF54373	FAD-linked reductases, C-terminal domain
RPD_3429	SSF54285	MoaD/ThiS
RPD_3430	SSF110399	ThiG-like
RPD_3431	SSF51391	Thiamin phosphate synthase
RPD_3438	SSF55298	YjgF-like
RPD_3440	SSF48264	Cytochrome P450
RPD_3441	SSF55136	Probable bacterial effector-binding domain
RPD_3445	SSF47240	Ferritin-like
RPD_3449	SSF47090	PGBD-like
RPD_3449	SSF53955	Lysozyme-like
RPD_3451	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_3452	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3454	SSF141523	L,D-transpeptidase catalytic domain-like
RPD_3457	SSF52821	Rhodanese/Cell cycle control phosphatase
RPD_3458	SSF52821	Rhodanese/Cell cycle control phosphatase
RPD_3460	SSF55073	Nucleotide cyclase
RPD_3460	SSF55785	PYP-like sensor domain (PAS domain)
RPD_3462	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3464	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_3465	SSF63829	Calcium-dependent phosphotriesterase
RPD_3467	SSF82771	GIY-YIG endonuclease
RPD_3468	SSF102114	Radical SAM enzymes
RPD_3470	SSF52833	Thioredoxin-like
RPD_3471	SSF75304	Amidase signature (AS) enzymes
RPD_3473	SSF53474	alpha/beta-Hydrolases
RPD_3474	SSF51569	Aldolase
RPD_3474	SSF53697	SIS domain
RPD_3475	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPD_3475	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_3476	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_3476	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPD_3477	SSF100950	NagB/RpiA/CoA transferase-like
RPD_3478	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3479	SSF56784	HAD-like
RPD_3480	SSF48208	Six-hairpin glycosidases
RPD_3481	SSF51445	(Trans)glycosidases
RPD_3482	SSF51445	(Trans)glycosidases
RPD_3483	SSF51011	Glycosyl hydrolase domain
RPD_3483	SSF51445	(Trans)glycosidases
RPD_3483	SSF56112	Protein kinase-like (PK-like)
RPD_3484	SSF51011	Glycosyl hydrolase domain
RPD_3484	SSF51445	(Trans)glycosidases
RPD_3484	SSF81296	E set domains
RPD_3485	SSF51011	Glycosyl hydrolase domain
RPD_3485	SSF51445	(Trans)glycosidases
RPD_3485	SSF81296	E set domains
RPD_3486	SSF51445	(Trans)glycosidases
RPD_3486	SSF81296	E set domains
RPD_3487	SSF51445	(Trans)glycosidases
RPD_3490	SSF50249	Nucleic acid-binding proteins
RPD_3490	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
RPD_3491	SSF100939	SPOC domain-like
RPD_3493	SSF64307	SirA-like
RPD_3494	SSF53448	Nucleotide-diphospho-sugar transferases
RPD_3495	SSF50129	GroES-like
RPD_3495	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_3496	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
RPD_3498	SSF54909	Dimeric alpha+beta barrel
RPD_3499	SSF54909	Dimeric alpha+beta barrel
RPD_3500	SSF51338	Composite domain of metallo-dependent hydrolases
RPD_3500	SSF51556	Metallo-dependent hydrolases
RPD_3501	SSF88723	PIN domain-like
RPD_3502	SSF89447	AbrB/MazE/MraZ-like
RPD_3503	SSF51278	Urease, beta-subunit
RPD_3504	SSF54111	Urease, gamma-subunit
RPD_3506	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3507	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3510	SSF53822	Periplasmic binding protein-like I
RPD_3511	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3512	SSF50249	Nucleic acid-binding proteins
RPD_3513	SSF50249	Nucleic acid-binding proteins
RPD_3522	SSF52172	CheY-like
RPD_3522	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3523	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3526	SSF48452	TPR-like
RPD_3527	SSF53187	Zn-dependent exopeptidases
RPD_3528	SSF50044	SH3-domain
RPD_3528	SSF54001	Cysteine proteinases
RPD_3529	SSF55811	Nudix
RPD_3530	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3531	SSF88723	PIN domain-like
RPD_3532	SSF161098	MetI-like
RPD_3533	SSF161098	MetI-like
RPD_3534	SSF53850	Periplasmic binding protein-like II
RPD_3535	SSF53850	Periplasmic binding protein-like II
RPD_3536	SSF46626	Cytochrome c
RPD_3537	SSF53448	Nucleotide-diphospho-sugar transferases
RPD_3538	SSF53850	Periplasmic binding protein-like II
RPD_3538	SSF55021	ACT-like
RPD_3539	SSF51679	Bacterial luciferase-like
RPD_3540	SSF51730	FAD-linked oxidoreductase
RPD_3541	SSF47644	Methionine synthase domain
RPD_3541	SSF51717	Dihydropteroate synthetase-like
RPD_3541	SSF52242	Cobalamin (vitamin B12)-binding domain
RPD_3541	SSF56507	Methionine synthase activation domain-like
RPD_3541	SSF82282	Homocysteine S-methyltransferase
RPD_3543	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_3544	SSF53067	Actin-like ATPase domain
RPD_3545	SSF46894	C-terminal effector domain of the bipartite response regulators
RPD_3545	SSF52172	CheY-like
RPD_3546	SSF109604	HD-domain/PDEase-like
RPD_3547	SSF158472	HAMP domain-like
RPD_3547	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPD_3548	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_3549	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_3549	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_3550	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_3550	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_3551	SSF53901	Thiolase-like
RPD_3552	SSF56801	Acetyl-CoA synthetase-like
RPD_3553	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPD_3553	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_3553	SSF52096	ClpP/crotonase
RPD_3554	SSF46785	"Winged helix" DNA-binding domain
RPD_3554	SSF55781	GAF domain-like
RPD_3555	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3556	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3559	SSF53822	Periplasmic binding protein-like I
RPD_3560	SSF53822	Periplasmic binding protein-like I
RPD_3561	SSF53822	Periplasmic binding protein-like I
RPD_3562	SSF53822	Periplasmic binding protein-like I
RPD_3563	SSF47240	Ferritin-like
RPD_3564	SSF56925	OMPA-like
RPD_3565	SSF53187	Zn-dependent exopeptidases
RPD_3565	SSF55031	Bacterial exopeptidase dimerisation domain
RPD_3566	SSF51905	FAD/NAD(P)-binding domain
RPD_3566	SSF54373	FAD-linked reductases, C-terminal domain
RPD_3567	SSF52402	Adenine nucleotide alpha hydrolases-like
RPD_3568	SSF53383	PLP-dependent transferases
RPD_3569	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPD_3571	SSF102114	Radical SAM enzymes
RPD_3572	SSF53167	Purine and uridine phosphorylases
RPD_3573	SSF48239	Terpenoid cyclases/Protein prenyltransferases
RPD_3574	SSF51905	FAD/NAD(P)-binding domain
RPD_3575	SSF48576	Terpenoid synthases
RPD_3576	SSF48576	Terpenoid synthases
RPD_3579	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPD_3580	SSF102114	Radical SAM enzymes
RPD_3581	SSF158472	HAMP domain-like
RPD_3581	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPD_3583	SSF54001	Cysteine proteinases
RPD_3584	SSF56059	Glutathione synthetase ATP-binding domain-like
RPD_3585	SSF54001	Cysteine proteinases
RPD_3586	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPD_3587	SSF89733	L-sulfolactate dehydrogenase-like
RPD_3588	SSF46785	"Winged helix" DNA-binding domain
RPD_3589	SSF56529	FAH
RPD_3590	SSF55331	Tautomerase/MIF
RPD_3591	SSF53720	ALDH-like
RPD_3592	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPD_3593	SSF56529	FAH
RPD_3594	SSF52467	DHS-like NAD/FAD-binding domain
RPD_3594	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPD_3595	SSF51197	Clavaminate synthase-like
RPD_3601	SSF51206	cAMP-binding domain-like
RPD_3602	SSF52096	ClpP/crotonase
RPD_3603	SSF55469	FMN-dependent nitroreductase-like
RPD_3604	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_3604	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_3605	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_3605	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_3606	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_3606	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_3607	SSF56801	Acetyl-CoA synthetase-like
RPD_3608	SSF52096	ClpP/crotonase
RPD_3609	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_3610	SSF46689	Homeodomain-like
RPD_3610	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPD_3611	SSF53901	Thiolase-like
RPD_3612	SSF56801	Acetyl-CoA synthetase-like
RPD_3614	SSF56925	OMPA-like
RPD_3616	SSF57652	HIPIP (high potential iron protein)
RPD_3617	SSF103515	Autotransporter
RPD_3617	SSF52799	(Phosphotyrosine protein) phosphatases II
RPD_3618	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_3618	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_3619	SSF142433	CinA-like
RPD_3621	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
RPD_3621	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
RPD_3622	SSF103473	MFS general substrate transporter
RPD_3627	SSF56300	Metallo-dependent phosphatases
RPD_3628	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3630	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3631	SSF53098	Ribonuclease H-like
RPD_3632	SSF52200	Toll/Interleukin receptor TIR domain
RPD_3635	SSF143081	BB1717-like
RPD_3636	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
RPD_3636	SSF56672	DNA/RNA polymerases
RPD_3637	SSF46626	Cytochrome c
RPD_3639	SSF46785	"Winged helix" DNA-binding domain
RPD_3640	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPD_3641	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPD_3642	SSF160240	Cation efflux protein cytoplasmic domain-like
RPD_3642	SSF161111	Cation efflux protein transmembrane domain-like
RPD_3643	SSF55008	HMA, heavy metal-associated domain
RPD_3643	SSF56784	HAD-like
RPD_3643	SSF81653	Calcium ATPase, transduction domain A
RPD_3643	SSF81665	Calcium ATPase, transmembrane domain M
RPD_3646	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPD_3646	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPD_3646	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPD_3647	SSF111369	HlyD-like secretion proteins
RPD_3648	SSF56954	Outer membrane efflux proteins (OEP)
RPD_3654	SSF56300	Metallo-dependent phosphatases
RPD_3656	SSF140990	FtsH protease domain-like
RPD_3656	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3659	SSF53098	Ribonuclease H-like
RPD_3665	SSF103473	MFS general substrate transporter
RPD_3669	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPD_3669	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPD_3671	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3672	SSF52172	CheY-like
RPD_3674	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
RPD_3674	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_3675	SSF52172	CheY-like
RPD_3675	SSF52738	Methylesterase CheB, C-terminal domain
RPD_3676	SSF52172	CheY-like
RPD_3677	SSF50341	CheW-like
RPD_3678	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RPD_3678	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_3678	SSF50341	CheW-like
RPD_3678	SSF52172	CheY-like
RPD_3678	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_3680	SSF56655	Carbohydrate phosphatase
RPD_3684	SSF160935	VPA0735-like
RPD_3685	SSF53098	Ribonuclease H-like
RPD_3688	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPD_3689	SSF141523	L,D-transpeptidase catalytic domain-like
RPD_3693	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_3693	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_3694	SSF48264	Cytochrome P450
RPD_3695	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_3695	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_3696	SSF89796	CoA-transferase family III (CaiB/BaiF)
RPD_3697	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_3699	SSF52467	DHS-like NAD/FAD-binding domain
RPD_3699	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPD_3700	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_3704	SSF54292	2Fe-2S ferredoxin-like
RPD_3704	SSF55073	Nucleotide cyclase
RPD_3704	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
RPD_3707	SSF51730	FAD-linked oxidoreductase
RPD_3707	SSF53720	ALDH-like
RPD_3707	SSF81935	N-terminal domain of bifunctional PutA protein
RPD_3708	SSF89796	CoA-transferase family III (CaiB/BaiF)
RPD_3711	SSF47616	GST C-terminal domain-like
RPD_3711	SSF52833	Thioredoxin-like
RPD_3714	SSF140478	LemA-like
RPD_3715	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
RPD_3715	SSF56003	Molybdenum cofactor-binding domain
RPD_3716	SSF51569	Aldolase
RPD_3717	SSF50993	Peptidase/esterase 'gauge' domain
RPD_3717	SSF53474	alpha/beta-Hydrolases
RPD_3718	SSF53383	PLP-dependent transferases
RPD_3719	SSF53474	alpha/beta-Hydrolases
RPD_3720	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3721	SSF55239	RuBisCO, small subunit
RPD_3722	SSF51649	RuBisCo, C-terminal domain
RPD_3722	SSF54966	RuBisCO, large subunit, small (N-terminal) domain
RPD_3723	SSF46785	"Winged helix" DNA-binding domain
RPD_3723	SSF53850	Periplasmic binding protein-like II
RPD_3724	SSF53383	PLP-dependent transferases
RPD_3726	SSF47240	Ferritin-like
RPD_3730	SSF50346	PRC-barrel domain
RPD_3730	SSF81490	Photosystem II reaction centre subunit H, transmembrane region
RPD_3731	SSF103473	MFS general substrate transporter
RPD_3732	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_3733	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3735	SSF53807	"Helical backbone" metal receptor
RPD_3736	SSF53807	"Helical backbone" metal receptor
RPD_3738	SSF52242	Cobalamin (vitamin B12)-binding domain
RPD_3739	SSF48613	Heme oxygenase-like
RPD_3740	SSF55781	GAF domain-like
RPD_3740	SSF55785	PYP-like sensor domain (PAS domain)
RPD_3741	SSF46689	Homeodomain-like
RPD_3741	SSF55785	PYP-like sensor domain (PAS domain)
RPD_3742	SSF46626	Cytochrome c
RPD_3745	SSF51905	FAD/NAD(P)-binding domain
RPD_3746	SSF103473	MFS general substrate transporter
RPD_3748	SSF46689	Homeodomain-like
RPD_3748	SSF55785	PYP-like sensor domain (PAS domain)
RPD_3749	SSF81483	Bacterial photosystem II reaction centre, L and M subunits
RPD_3750	SSF81483	Bacterial photosystem II reaction centre, L and M subunits
RPD_3751	SSF56918	Light-harvesting complex subunits
RPD_3752	SSF56918	Light-harvesting complex subunits
RPD_3754	SSF53807	"Helical backbone" metal receptor
RPD_3755	SSF53807	"Helical backbone" metal receptor
RPD_3756	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3757	SSF50129	GroES-like
RPD_3757	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_3758	SSF46785	"Winged helix" DNA-binding domain
RPD_3758	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_3759	SSF48576	Terpenoid synthases
RPD_3760	SSF51905	FAD/NAD(P)-binding domain
RPD_3761	SSF159245	AttH-like
RPD_3764	SSF102886	Coproporphyrinogen III oxidase
RPD_3765	SSF48576	Terpenoid synthases
RPD_3766	SSF51905	FAD/NAD(P)-binding domain
RPD_3767	SSF53474	alpha/beta-Hydrolases
RPD_3768	SSF53474	alpha/beta-Hydrolases
RPD_3769	SSF51726	UROD/MetE-like
RPD_3770	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3770	SSF53300	vWA-like
RPD_3771	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3772	SSF53850	Periplasmic binding protein-like II
RPD_3772	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
RPD_3774	SSF53474	alpha/beta-Hydrolases
RPD_3775	SSF49785	Galactose-binding domain-like
RPD_3780	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPD_3780	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPD_3780	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPD_3781	SSF111369	HlyD-like secretion proteins
RPD_3782	SSF51905	FAD/NAD(P)-binding domain
RPD_3785	SSF103473	MFS general substrate transporter
RPD_3786	SSF56918	Light-harvesting complex subunits
RPD_3787	SSF56918	Light-harvesting complex subunits
RPD_3788	SSF55781	GAF domain-like
RPD_3788	SSF55785	PYP-like sensor domain (PAS domain)
RPD_3788	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_3789	SSF46894	C-terminal effector domain of the bipartite response regulators
RPD_3789	SSF52172	CheY-like
RPD_3793	SSF53738	Phosphoglucomutase, first 3 domains
RPD_3793	SSF55957	Phosphoglucomutase, C-terminal domain
RPD_3794	SSF51905	FAD/NAD(P)-binding domain
RPD_3795	SSF53474	alpha/beta-Hydrolases
RPD_3796	SSF52172	CheY-like
RPD_3797	SSF56300	Metallo-dependent phosphatases
RPD_3798	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3801	SSF46785	"Winged helix" DNA-binding domain
RPD_3801	SSF48008	GntR ligand-binding domain-like
RPD_3802	SSF75304	Amidase signature (AS) enzymes
RPD_3803	SSF52317	Class I glutamine amidotransferase-like
RPD_3804	SSF143975	IlvD/EDD N-terminal domain-like
RPD_3804	SSF52016	LeuD/IlvD-like
RPD_3805	SSF46785	"Winged helix" DNA-binding domain
RPD_3805	SSF51206	cAMP-binding domain-like
RPD_3808	SSF56801	Acetyl-CoA synthetase-like
RPD_3809	SSF52096	ClpP/crotonase
RPD_3810	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_3810	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_3811	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_3812	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_3813	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_3814	SSF53901	Thiolase-like
RPD_3815	SSF46689	Homeodomain-like
RPD_3815	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPD_3816	SSF56801	Acetyl-CoA synthetase-like
RPD_3818	SSF51338	Composite domain of metallo-dependent hydrolases
RPD_3818	SSF51556	Metallo-dependent hydrolases
RPD_3819	SSF51161	Trimeric LpxA-like enzymes
RPD_3820	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3821	SSF53850	Periplasmic binding protein-like II
RPD_3822	SSF161098	MetI-like
RPD_3823	SSF161098	MetI-like
RPD_3824	SSF46785	"Winged helix" DNA-binding domain
RPD_3824	SSF64288	Chorismate lyase-like
RPD_3826	SSF159709	PhnH-like
RPD_3829	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3830	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3831	SSF51338	Composite domain of metallo-dependent hydrolases
RPD_3831	SSF51556	Metallo-dependent hydrolases
RPD_3832	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3833	SSF50475	FMN-binding split barrel
RPD_3834	SSF47240	Ferritin-like
RPD_3835	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_3836	SSF141371	PilZ domain-like
RPD_3836	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPD_3837	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3838	SSF54001	Cysteine proteinases
RPD_3840	SSF160272	Shew3726-like
RPD_3842	SSF46689	Homeodomain-like
RPD_3842	SSF52172	CheY-like
RPD_3842	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3843	SSF101801	Surface presentation of antigens (SPOA)
RPD_3845	SSF48029	FliG
RPD_3847	SSF48295	TrpR-like
RPD_3848	SSF55103	FAD-linked oxidases, C-terminal domain
RPD_3848	SSF56176	FAD-binding/transporter-associated domain-like
RPD_3849	SSF103515	Autotransporter
RPD_3849	SSF52266	SGNH hydrolase
RPD_3850	SSF56770	HydA/Nqo6-like
RPD_3851	SSF143243	Nqo5-like
RPD_3851	SSF56762	HydB/Nqo4-like
RPD_3859	SSF141130	Acetamidase/Formamidase-like
RPD_3860	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3861	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3864	SSF53822	Periplasmic binding protein-like I
RPD_3865	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_3865	SSF52172	CheY-like
RPD_3865	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_3866	SSF46894	C-terminal effector domain of the bipartite response regulators
RPD_3866	SSF52172	CheY-like
RPD_3872	SSF56801	Acetyl-CoA synthetase-like
RPD_3874	SSF53474	alpha/beta-Hydrolases
RPD_3876	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_3877	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
RPD_3879	SSF53271	PRTase-like
RPD_3880	SSF52121	Lumazine synthase
RPD_3882	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPD_3882	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_3883	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_3883	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_3884	SSF52172	CheY-like
RPD_3885	SSF46785	"Winged helix" DNA-binding domain
RPD_3886	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
RPD_3889	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_3890	SSF56918	Light-harvesting complex subunits
RPD_3891	SSF56918	Light-harvesting complex subunits
RPD_3894	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3895	SSF51430	NAD(P)-linked oxidoreductase
RPD_3896	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_3897	SSF103481	Multidrug resistance efflux transporter EmrE
RPD_3898	SSF54909	Dimeric alpha+beta barrel
RPD_3899	SSF109604	HD-domain/PDEase-like
RPD_3900	SSF103481	Multidrug resistance efflux transporter EmrE
RPD_3901	SSF53850	Periplasmic binding protein-like II
RPD_3902	SSF47240	Ferritin-like
RPD_3904	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPD_3905	SSF143548	Serine metabolism enzymes domain
RPD_3905	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_3905	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RPD_3905	SSF55021	ACT-like
RPD_3906	SSF53383	PLP-dependent transferases
RPD_3907	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPD_3908	SSF55785	PYP-like sensor domain (PAS domain)
RPD_3909	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_3910	SSF47616	GST C-terminal domain-like
RPD_3910	SSF52833	Thioredoxin-like
RPD_3911	SSF56925	OMPA-like
RPD_3912	SSF56925	OMPA-like
RPD_3913	SSF103473	MFS general substrate transporter
RPD_3914	SSF53738	Phosphoglucomutase, first 3 domains
RPD_3914	SSF55957	Phosphoglucomutase, C-terminal domain
RPD_3916	SSF51395	FMN-linked oxidoreductases
RPD_3917	SSF52096	ClpP/crotonase
RPD_3919	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_3919	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RPD_3920	SSF47413	lambda repressor-like DNA-binding domains
RPD_3921	SSF50447	Translation proteins
RPD_3921	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3921	SSF54211	Ribosomal protein S5 domain 2-like
RPD_3921	SSF54980	EF-G C-terminal domain-like
RPD_3925	SSF53383	PLP-dependent transferases
RPD_3927	SSF47616	GST C-terminal domain-like
RPD_3927	SSF52833	Thioredoxin-like
RPD_3928	SSF50952	Soluble quinoprotein glucose dehydrogenase
RPD_3930	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
RPD_3931	SSF51430	NAD(P)-linked oxidoreductase
RPD_3933	SSF56784	HAD-like
RPD_3938	SSF52980	Restriction endonuclease-like
RPD_3940	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3941	SSF56300	Metallo-dependent phosphatases
RPD_3942	SSF48371	ARM repeat
RPD_3942	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3950	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3953	SSF56300	Metallo-dependent phosphatases
RPD_3959	SSF53041	Resolvase-like
RPD_3961	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_3962	SSF52402	Adenine nucleotide alpha hydrolases-like
RPD_3965	SSF53955	Lysozyme-like
RPD_3967	SSF52317	Class I glutamine amidotransferase-like
RPD_3968	SSF51182	RmlC-like cupins
RPD_3969	SSF53901	Thiolase-like
RPD_3970	SSF47413	lambda repressor-like DNA-binding domains
RPD_3971	SSF140931	Fic-like
RPD_3972	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPD_3972	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPD_3973	SSF56731	DNA primase core
RPD_3973	SSF57783	Zinc beta-ribbon
RPD_3977	SSF110857	Gamma-glutamyl cyclotransferase-like
RPD_3978	SSF54001	Cysteine proteinases
RPD_3979	SSF53187	Zn-dependent exopeptidases
RPD_3981	SSF46785	"Winged helix" DNA-binding domain
RPD_3982	SSF55961	Bet v1-like
RPD_3984	SSF56801	Acetyl-CoA synthetase-like
RPD_3985	SSF89095	GatB/YqeY motif
RPD_3986	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
RPD_3986	SSF52317	Class I glutamine amidotransferase-like
RPD_3987	SSF46600	C-terminal UvrC-binding domain of UvrB
RPD_3987	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3989	SSF47413	lambda repressor-like DNA-binding domains
RPD_3991	SSF53901	Thiolase-like
RPD_3993	SSF54427	NTF2-like
RPD_3996	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_3997	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_3999	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_3999	SSF81271	TGS-like
RPD_4000	SSF53178	Peptidyl-tRNA hydrolase-like
RPD_4001	SSF50715	Ribosomal protein L25-like
RPD_4002	SSF74653	TolA/TonB C-terminal domain
RPD_4005	SSF52096	ClpP/crotonase
RPD_4006	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_4006	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_4007	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_4007	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_4008	SSF56801	Acetyl-CoA synthetase-like
RPD_4009	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
RPD_4010	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPD_4011	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPD_4011	SSF52922	TK C-terminal domain-like
RPD_4012	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
RPD_4012	SSF54862	4Fe-4S ferredoxins
RPD_4013	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPD_4013	SSF52922	TK C-terminal domain-like
RPD_4013	SSF54862	4Fe-4S ferredoxins
RPD_4017	SSF55073	Nucleotide cyclase
RPD_4019	SSF54631	CBS-domain pair
RPD_4020	SSF51206	cAMP-binding domain-like
RPD_4020	SSF81324	Voltage-gated potassium channels
RPD_4022	SSF53850	Periplasmic binding protein-like II
RPD_4023	SSF53187	Zn-dependent exopeptidases
RPD_4023	SSF55031	Bacterial exopeptidase dimerisation domain
RPD_4024	SSF161098	MetI-like
RPD_4025	SSF161098	MetI-like
RPD_4026	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_4027	SSF52833	Thioredoxin-like
RPD_4028	SSF53098	Ribonuclease H-like
RPD_4029	SSF56112	Protein kinase-like (PK-like)
RPD_4032	SSF118116	DNA mismatch repair protein MutL
RPD_4032	SSF54211	Ribosomal protein S5 domain 2-like
RPD_4032	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_4033	SSF75620	Release factor
RPD_4034	SSF63411	LuxS/MPP-like metallohydrolase
RPD_4035	SSF63411	LuxS/MPP-like metallohydrolase
RPD_4038	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPD_4038	SSF50677	ValRS/IleRS/LeuRS editing domain
RPD_4038	SSF52374	Nucleotidylyl transferase
RPD_4039	SSF51161	Trimeric LpxA-like enzymes
RPD_4040	SSF52374	Nucleotidylyl transferase
RPD_4040	SSF82114	Riboflavin kinase-like
RPD_4041	SSF55895	Ribonuclease Rh-like
RPD_4046	SSF56935	Porins
RPD_4047	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_4048	SSF50182	Sm-like ribonucleoproteins
RPD_4048	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
RPD_4048	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
RPD_4049	SSF55811	Nudix
RPD_4050	SSF56300	Metallo-dependent phosphatases
RPD_4053	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPD_4054	SSF47413	lambda repressor-like DNA-binding domains
RPD_4055	SSF47090	PGBD-like
RPD_4055	SSF53955	Lysozyme-like
RPD_4056	SSF53822	Periplasmic binding protein-like I
RPD_4057	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_4058	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_4062	SSF51395	FMN-linked oxidoreductases
RPD_4063	SSF53850	Periplasmic binding protein-like II
RPD_4065	SSF161098	MetI-like
RPD_4066	SSF161098	MetI-like
RPD_4067	SSF50331	MOP-like
RPD_4067	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_4068	SSF50331	MOP-like
RPD_4068	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_4069	SSF51905	FAD/NAD(P)-binding domain
RPD_4069	SSF54373	FAD-linked reductases, C-terminal domain
RPD_4070	SSF100950	NagB/RpiA/CoA transferase-like
RPD_4070	SSF46785	"Winged helix" DNA-binding domain
RPD_4071	SSF50475	FMN-binding split barrel
RPD_4072	SSF46689	Homeodomain-like
RPD_4072	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPD_4073	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPD_4073	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPD_4073	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPD_4074	SSF111369	HlyD-like secretion proteins
RPD_4075	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPD_4076	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RPD_4076	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_4076	SSF52172	CheY-like
RPD_4076	SSF55785	PYP-like sensor domain (PAS domain)
RPD_4076	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_4077	SSF69047	Hypothetical protein YjbJ
RPD_4078	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_4078	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RPD_4079	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPD_4081	SSF56801	Acetyl-CoA synthetase-like
RPD_4082	SSF46785	"Winged helix" DNA-binding domain
RPD_4082	SSF51206	cAMP-binding domain-like
RPD_4084	SSF56281	Metallo-hydrolase/oxidoreductase
RPD_4085	SSF56529	FAH
RPD_4086	SSF47616	GST C-terminal domain-like
RPD_4086	SSF52833	Thioredoxin-like
RPD_4087	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
RPD_4087	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
RPD_4088	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPD_4089	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_4092	SSF51261	Duplicated hybrid motif
RPD_4095	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_4095	SSF81923	Double Clp-N motif
RPD_4096	SSF50800	PK beta-barrel domain-like
RPD_4097	SSF54001	Cysteine proteinases
RPD_4098	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_4099	SSF53474	alpha/beta-Hydrolases
RPD_4100	SSF48600	Chorismate mutase II
RPD_4101	SSF53383	PLP-dependent transferases
RPD_4102	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPD_4102	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_4103	SSF53474	alpha/beta-Hydrolases
RPD_4104	SSF51246	Rudiment single hybrid motif
RPD_4104	SSF52440	PreATP-grasp domain
RPD_4104	SSF56059	Glutathione synthetase ATP-binding domain-like
RPD_4106	SSF53474	alpha/beta-Hydrolases
RPD_4108	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_4109	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPD_4111	SSF56655	Carbohydrate phosphatase
RPD_4112	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
RPD_4116	SSF75217	alpha/beta knot
RPD_4116	SSF88697	PUA domain-like
RPD_4117	SSF55681	Class II aaRS and biotin synthetases
RPD_4118	SSF53850	Periplasmic binding protein-like II
RPD_4119	SSF53448	Nucleotide-diphospho-sugar transferases
RPD_4120	SSF88713	Glycoside hydrolase/deacetylase
RPD_4122	SSF141523	L,D-transpeptidase catalytic domain-like
RPD_4123	SSF75708	Chemotaxis phosphatase CheZ
RPD_4124	SSF103473	MFS general substrate transporter
RPD_4126	SSF50129	GroES-like
RPD_4127	SSF48592	GroEL equatorial domain-like
RPD_4127	SSF52029	GroEL apical domain-like
RPD_4127	SSF54849	GroEL-intermediate domain like
RPD_4129	SSF51905	FAD/NAD(P)-binding domain
RPD_4132	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_4132	SSF90123	ABC transporter transmembrane region
RPD_4135	SSF52402	Adenine nucleotide alpha hydrolases-like
RPD_4135	SSF54862	4Fe-4S ferredoxins
RPD_4136	SSF55103	FAD-linked oxidases, C-terminal domain
RPD_4136	SSF56176	FAD-binding/transporter-associated domain-like
RPD_4137	SSF55103	FAD-linked oxidases, C-terminal domain
RPD_4137	SSF56176	FAD-binding/transporter-associated domain-like
RPD_4138	SSF46689	Homeodomain-like
RPD_4138	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPD_4141	SSF140990	FtsH protease domain-like
RPD_4141	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_4142	SSF52402	Adenine nucleotide alpha hydrolases-like
RPD_4143	SSF48452	TPR-like
RPD_4144	SSF103088	OmpA-like
RPD_4145	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_4146	SSF141868	EAL domain-like
RPD_4146	SSF55073	Nucleotide cyclase
RPD_4147	SSF52964	TolB, N-terminal domain
RPD_4147	SSF69304	Tricorn protease N-terminal domain
RPD_4151	SSF54427	NTF2-like
RPD_4152	SSF69118	AhpD-like
RPD_4154	SSF46689	Homeodomain-like
RPD_4154	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPD_4155	SSF54909	Dimeric alpha+beta barrel
RPD_4158	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_4159	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPD_4160	SSF48452	TPR-like
RPD_4160	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPD_4160	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPD_4161	SSF54909	Dimeric alpha+beta barrel
RPD_4162	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPD_4164	SSF51905	FAD/NAD(P)-binding domain
RPD_4165	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_4167	SSF46785	"Winged helix" DNA-binding domain
RPD_4167	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_4168	SSF53927	Cytidine deaminase-like
RPD_4169	SSF46929	DNA helicase RuvA subunit, C-terminal domain
RPD_4169	SSF47781	RuvA domain 2-like
RPD_4169	SSF50249	Nucleic acid-binding proteins
RPD_4170	SSF53098	Ribonuclease H-like
RPD_4171	SSF75625	YebC-like
RPD_4172	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPD_4175	SSF53383	PLP-dependent transferases
RPD_4176	SSF56059	Glutathione synthetase ATP-binding domain-like
RPD_4177	SSF53383	PLP-dependent transferases
RPD_4178	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_4179	SSF56300	Metallo-dependent phosphatases
RPD_4180	SSF100950	NagB/RpiA/CoA transferase-like
RPD_4182	SSF47413	lambda repressor-like DNA-binding domains
RPD_4185	SSF52821	Rhodanese/Cell cycle control phosphatase
RPD_4188	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPD_4188	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPD_4188	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPD_4189	SSF111369	HlyD-like secretion proteins
RPD_4191	SSF55856	Cytochrome b5-like heme/steroid binding domain
RPD_4192	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
RPD_4192	SSF63380	Riboflavin synthase domain-like
RPD_4194	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPD_4195	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_4196	SSF103481	Multidrug resistance efflux transporter EmrE
RPD_4197	SSF46785	"Winged helix" DNA-binding domain
RPD_4197	SSF53850	Periplasmic binding protein-like II
RPD_4198	SSF52833	Thioredoxin-like
RPD_4199	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPD_4199	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPD_4199	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPD_4200	SSF111369	HlyD-like secretion proteins
RPD_4201	SSF46785	"Winged helix" DNA-binding domain
RPD_4203	SSF53146	Nitrogenase accessory factor-like
RPD_4204	SSF50022	ISP domain
RPD_4205	SSF46785	"Winged helix" DNA-binding domain
RPD_4208	SSF140478	LemA-like
RPD_4210	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_4211	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_4212	SSF53271	PRTase-like
RPD_4213	SSF52317	Class I glutamine amidotransferase-like
RPD_4213	SSF56322	ADC synthase
RPD_4214	SSF143100	TTHA1013/TTHA0281-like
RPD_4215	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_4216	SSF56112	Protein kinase-like (PK-like)
RPD_4218	SSF82057	Prokaryotic SH3-related domain
RPD_4219	SSF56925	OMPA-like
RPD_4221	SSF56801	Acetyl-CoA synthetase-like
RPD_4222	SSF48452	TPR-like
RPD_4223	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_4226	SSF53850	Periplasmic binding protein-like II
RPD_4227	SSF103473	MFS general substrate transporter
RPD_4228	SSF56300	Metallo-dependent phosphatases
RPD_4229	SSF53850	Periplasmic binding protein-like II
RPD_4230	SSF141868	EAL domain-like
RPD_4230	SSF52172	CheY-like
RPD_4234	SSF55811	Nudix
RPD_4235	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPD_4237	SSF56784	HAD-like
RPD_4238	SSF53383	PLP-dependent transferases
RPD_4239	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_4240	SSF53383	PLP-dependent transferases
RPD_4241	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_4242	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_4242	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_4243	SSF52172	CheY-like
RPD_4244	SSF52833	Thioredoxin-like
RPD_4244	SSF74863	Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
RPD_4245	SSF52833	Thioredoxin-like
RPD_4246	SSF141523	L,D-transpeptidase catalytic domain-like
RPD_4247	SSF51905	FAD/NAD(P)-binding domain
RPD_4247	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RPD_4248	SSF51905	FAD/NAD(P)-binding domain
RPD_4248	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RPD_4249	SSF46626	Cytochrome c
RPD_4251	SSF46626	Cytochrome c
RPD_4252	SSF56524	Oxidoreductase molybdopterin-binding domain
RPD_4252	SSF81296	E set domains
RPD_4253	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
RPD_4253	SSF56300	Metallo-dependent phosphatases
RPD_4254	SSF81296	E set domains
RPD_4256	SSF46626	Cytochrome c
RPD_4257	SSF46626	Cytochrome c
RPD_4258	SSF143744	GlcG-like
RPD_4259	SSF52833	Thioredoxin-like
RPD_4261	SSF52833	Thioredoxin-like
RPD_4262	SSF46785	"Winged helix" DNA-binding domain
RPD_4264	SSF75169	DsrEFH-like
RPD_4267	SSF56954	Outer membrane efflux proteins (OEP)
RPD_4268	SSF49503	Cupredoxins
RPD_4269	SSF49503	Cupredoxins
RPD_4271	SSF81296	E set domains
RPD_4275	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPD_4275	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPD_4276	SSF52972	ITPase-like
RPD_4277	SSF52788	Phosphotyrosine protein phosphatases I
RPD_4279	SSF53720	ALDH-like
RPD_4281	SSF55205	EPT/RTPC-like
RPD_4285	SSF54427	NTF2-like
RPD_4286	SSF75304	Amidase signature (AS) enzymes
RPD_4287	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_4288	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_4289	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_4292	SSF53822	Periplasmic binding protein-like I
RPD_4293	SSF141130	Acetamidase/Formamidase-like
RPD_4294	SSF75304	Amidase signature (AS) enzymes
RPD_4295	SSF53822	Periplasmic binding protein-like I
RPD_4296	SSF52172	CheY-like
RPD_4298	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_4298	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_4299	SSF52096	ClpP/crotonase
RPD_4300	SSF103515	Autotransporter
RPD_4301	SSF47175	Cytochromes
RPD_4302	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
RPD_4302	SSF56300	Metallo-dependent phosphatases
RPD_4303	SSF52768	Arginase/deacetylase
RPD_4304	SSF116842	XseB-like
RPD_4305	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPD_4305	SSF52922	TK C-terminal domain-like
RPD_4306	SSF52309	N-(deoxy)ribosyltransferase-like
RPD_4307	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_4307	SSF55174	Alpha-L RNA-binding motif
RPD_4309	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_4310	SSF102829	Cell division protein ZapA-like
RPD_4312	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPD_4312	SSF52922	TK C-terminal domain-like
RPD_4313	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_4313	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPD_4314	SSF53748	Phosphoglycerate kinase
RPD_4316	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
RPD_4317	SSF51569	Aldolase
RPD_4318	SSF51391	Thiamin phosphate synthase
RPD_4319	SSF81901	HCP-like
RPD_4320	SSF56655	Carbohydrate phosphatase
RPD_4321	SSF54909	Dimeric alpha+beta barrel
RPD_4322	SSF102114	Radical SAM enzymes
RPD_4323	SSF102114	Radical SAM enzymes
RPD_4324	SSF54427	NTF2-like
RPD_4327	SSF55718	SCP-like
RPD_4328	SSF143968	UbiD C-terminal domain-like
RPD_4328	SSF50475	FMN-binding split barrel
RPD_4329	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
RPD_4332	SSF47413	lambda repressor-like DNA-binding domains
RPD_4335	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_4338	SSF103088	OmpA-like
RPD_4339	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPD_4342	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_4342	SSF90123	ABC transporter transmembrane region
RPD_4343	SSF143800	L28p-like
RPD_4346	SSF50129	GroES-like
RPD_4346	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_4347	SSF141868	EAL domain-like
RPD_4347	SSF55073	Nucleotide cyclase
RPD_4347	SSF55785	PYP-like sensor domain (PAS domain)
RPD_4348	SSF143456	VC0467-like
RPD_4350	SSF46785	"Winged helix" DNA-binding domain
RPD_4350	SSF53850	Periplasmic binding protein-like II
RPD_4351	SSF51182	RmlC-like cupins
RPD_4352	SSF52218	Flavoproteins
RPD_4354	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_4356	SSF52172	CheY-like
RPD_4357	SSF53187	Zn-dependent exopeptidases
RPD_4358	SSF56655	Carbohydrate phosphatase
RPD_4359	SSF46689	Homeodomain-like
RPD_4360	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPD_4363	SSF47090	PGBD-like
RPD_4363	SSF53955	Lysozyme-like
RPD_4364	SSF52266	SGNH hydrolase
RPD_4365	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_4366	SSF51735	NAD(P)-binding Rossmann-fold domains
RPD_4367	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_4368	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_4371	SSF53822	Periplasmic binding protein-like I
RPD_4372	SSF141371	PilZ domain-like
RPD_4373	SSF53850	Periplasmic binding protein-like II
RPD_4374	SSF158472	HAMP domain-like
RPD_4374	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_4375	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_4375	SSF52172	CheY-like
RPD_4375	SSF55781	GAF domain-like
RPD_4375	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_4376	SSF46894	C-terminal effector domain of the bipartite response regulators
RPD_4376	SSF52172	CheY-like
RPD_4377	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPD_4377	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPD_4381	SSF141523	L,D-transpeptidase catalytic domain-like
RPD_4382	SSF53850	Periplasmic binding protein-like II
RPD_4383	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_4383	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_4384	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPD_4384	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPD_4385	SSF69118	AhpD-like
RPD_4386	SSF103473	MFS general substrate transporter
RPD_4387	SSF103473	MFS general substrate transporter
RPD_4388	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPD_4390	SSF56935	Porins
RPD_4393	SSF103473	MFS general substrate transporter
RPD_4394	SSF53822	Periplasmic binding protein-like I
RPD_4395	SSF103473	MFS general substrate transporter
RPD_4396	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_4398	SSF159245	AttH-like
RPD_4399	SSF161084	MAPEG domain-like
RPD_4400	SSF53822	Periplasmic binding protein-like I
RPD_4401	SSF56925	OMPA-like
RPD_4401	SSF69917	OMPT-like
RPD_4402	SSF110942	HSP90 C-terminal domain
RPD_4402	SSF54211	Ribosomal protein S5 domain 2-like
RPD_4402	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_4403	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPD_4403	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPD_4404	SSF52172	CheY-like
RPD_4407	SSF100950	NagB/RpiA/CoA transferase-like
RPD_4408	SSF53167	Purine and uridine phosphorylases
RPD_4409	SSF56796	Dehydroquinate synthase-like
RPD_4410	SSF56801	Acetyl-CoA synthetase-like
RPD_4412	SSF47819	HRDC-like
RPD_4412	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPD_4415	SSF56801	Acetyl-CoA synthetase-like
RPD_4416	SSF109604	HD-domain/PDEase-like
RPD_4416	SSF52172	CheY-like
RPD_4419	SSF55068	Peptide methionine sulfoxide reductase
RPD_4421	SSF46992	Ribosomal protein S20