RPA0018	PWY-3781	aerobic respiration I (cytochrome c)
RPA0018	PWY-4521	arsenite oxidation I (respiratory)
RPA0018	PWY-6692	Fe(II) oxidation
RPA0018	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPA0019	PWY-3781	aerobic respiration I (cytochrome c)
RPA0019	PWY-4521	arsenite oxidation I (respiratory)
RPA0019	PWY-6692	Fe(II) oxidation
RPA0019	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPA0020	PWY-6654	phosphopantothenate biosynthesis III
RPA0025	PWY-4041	&gamma;-glutamyl cycle
RPA0025	PWY-5826	hypoglycin biosynthesis
RPA0027	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RPA0027	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
RPA0027	PWY-6164	3-dehydroquinate biosynthesis I
RPA0028	PWY-6123	inosine-5'-phosphate biosynthesis I
RPA0028	PWY-6124	inosine-5'-phosphate biosynthesis II
RPA0028	PWY-7234	inosine-5'-phosphate biosynthesis III
RPA0061	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPA0063	PWY-7205	CMP phosphorylation
RPA0071	PWY-4381	fatty acid biosynthesis initiation I
RPA0071	PWY-5743	3-hydroxypropanoate cycle
RPA0071	PWY-5744	glyoxylate assimilation
RPA0071	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPA0071	PWY-6679	jadomycin biosynthesis
RPA0071	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPA0072	PWY-2161	folate polyglutamylation
RPA0080	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RPA0080	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPA0080	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPA0080	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
RPA0083	PWY-5839	menaquinol-7 biosynthesis
RPA0083	PWY-5844	menaquinol-9 biosynthesis
RPA0083	PWY-5849	menaquinol-6 biosynthesis
RPA0083	PWY-5890	menaquinol-10 biosynthesis
RPA0083	PWY-5891	menaquinol-11 biosynthesis
RPA0083	PWY-5892	menaquinol-12 biosynthesis
RPA0083	PWY-5895	menaquinol-13 biosynthesis
RPA0115	PWY-3221	dTDP-L-rhamnose biosynthesis II
RPA0115	PWY-6808	dTDP-D-forosamine biosynthesis
RPA0115	PWY-6942	dTDP-D-desosamine biosynthesis
RPA0115	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RPA0115	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
RPA0115	PWY-6974	dTDP-L-olivose biosynthesis
RPA0115	PWY-6976	dTDP-L-mycarose biosynthesis
RPA0115	PWY-7104	dTDP-L-megosamine biosynthesis
RPA0115	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
RPA0115	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
RPA0115	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
RPA0115	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
RPA0115	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
RPA0115	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
RPA0115	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
RPA0115	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
RPA0116	PWY-3221	dTDP-L-rhamnose biosynthesis II
RPA0116	PWY-6808	dTDP-D-forosamine biosynthesis
RPA0116	PWY-6942	dTDP-D-desosamine biosynthesis
RPA0116	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RPA0116	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
RPA0116	PWY-6974	dTDP-L-olivose biosynthesis
RPA0116	PWY-6976	dTDP-L-mycarose biosynthesis
RPA0116	PWY-7104	dTDP-L-megosamine biosynthesis
RPA0116	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
RPA0116	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
RPA0116	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
RPA0116	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
RPA0116	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
RPA0116	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
RPA0116	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
RPA0116	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
RPA0117	PWY-3221	dTDP-L-rhamnose biosynthesis II
RPA0117	PWY-6808	dTDP-D-forosamine biosynthesis
RPA0117	PWY-6942	dTDP-D-desosamine biosynthesis
RPA0117	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RPA0117	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
RPA0117	PWY-6974	dTDP-L-olivose biosynthesis
RPA0117	PWY-6976	dTDP-L-mycarose biosynthesis
RPA0117	PWY-7104	dTDP-L-megosamine biosynthesis
RPA0117	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
RPA0117	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
RPA0117	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
RPA0117	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
RPA0117	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
RPA0117	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
RPA0117	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
RPA0117	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
RPA0120	PWY-3221	dTDP-L-rhamnose biosynthesis II
RPA0120	PWY-6808	dTDP-D-forosamine biosynthesis
RPA0120	PWY-6942	dTDP-D-desosamine biosynthesis
RPA0120	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RPA0120	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
RPA0120	PWY-6974	dTDP-L-olivose biosynthesis
RPA0120	PWY-6976	dTDP-L-mycarose biosynthesis
RPA0120	PWY-7104	dTDP-L-megosamine biosynthesis
RPA0120	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
RPA0120	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
RPA0120	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
RPA0120	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
RPA0120	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
RPA0120	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
RPA0120	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
RPA0120	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
RPA0165	PWY-5381	pyridine nucleotide cycling (plants)
RPA0165	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
RPA0176	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPA0178	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPA0185	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
RPA0185	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RPA0188	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RPA0189	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RPA0190	PWY-5392	reductive TCA cycle II
RPA0190	PWY-5537	pyruvate fermentation to acetate V
RPA0190	PWY-5538	pyruvate fermentation to acetate VI
RPA0190	PWY-5690	TCA cycle II (plants and fungi)
RPA0190	PWY-5913	TCA cycle VI (obligate autotrophs)
RPA0190	PWY-6728	methylaspartate cycle
RPA0190	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPA0190	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPA0191	PWY-5392	reductive TCA cycle II
RPA0191	PWY-5537	pyruvate fermentation to acetate V
RPA0191	PWY-5538	pyruvate fermentation to acetate VI
RPA0191	PWY-5690	TCA cycle II (plants and fungi)
RPA0191	PWY-5913	TCA cycle VI (obligate autotrophs)
RPA0191	PWY-6728	methylaspartate cycle
RPA0191	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPA0191	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPA0192	PWY-1622	formaldehyde assimilation I (serine pathway)
RPA0192	PWY-5392	reductive TCA cycle II
RPA0192	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPA0192	PWY-5690	TCA cycle II (plants and fungi)
RPA0192	PWY-5913	TCA cycle VI (obligate autotrophs)
RPA0192	PWY-6728	methylaspartate cycle
RPA0192	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPA0192	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPA0192	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPA0211	PWY-6672	<i>cis</i>-genanyl-CoA degradation
RPA0211	PWY-7118	chitin degradation to ethanol
RPA0215	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RPA0215	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RPA0216	PWY-3781	aerobic respiration I (cytochrome c)
RPA0216	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RPA0216	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPA0216	PWY-5690	TCA cycle II (plants and fungi)
RPA0216	PWY-6728	methylaspartate cycle
RPA0216	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPA0216	PWY-7254	TCA cycle VII (acetate-producers)
RPA0216	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPA0217	PWY-3781	aerobic respiration I (cytochrome c)
RPA0217	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RPA0217	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPA0217	PWY-5690	TCA cycle II (plants and fungi)
RPA0217	PWY-6728	methylaspartate cycle
RPA0217	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPA0217	PWY-7254	TCA cycle VII (acetate-producers)
RPA0217	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPA0225	PWY-6854	ethylene biosynthesis III (microbes)
RPA0227	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RPA0230	PWY-2941	L-lysine biosynthesis II
RPA0230	PWY-2942	L-lysine biosynthesis III
RPA0230	PWY-5097	L-lysine biosynthesis VI
RPA0230	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPA0230	PWY-6559	spermidine biosynthesis II
RPA0230	PWY-6562	norspermidine biosynthesis
RPA0230	PWY-7153	grixazone biosynthesis
RPA0230	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPA0232	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPA0232	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPA0232	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPA0232	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPA0242	PWY-6829	tRNA methylation (yeast)
RPA0242	PWY-7285	methylwyosine biosynthesis
RPA0242	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
RPA0250	PWY-2941	L-lysine biosynthesis II
RPA0250	PWY-5097	L-lysine biosynthesis VI
RPA0254	PWY-5667	CDP-diacylglycerol biosynthesis I
RPA0254	PWY-5981	CDP-diacylglycerol biosynthesis III
RPA0256	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPA0256	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPA0262	PWY-5532	adenosine nucleotides degradation IV
RPA0262	PWY-5723	Rubisco shunt
RPA0285	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPA0296	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPA0315	PWY-3961	phosphopantothenate biosynthesis II
RPA0320	PWY-6157	autoinducer AI-1 biosynthesis
RPA0328	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
RPA0337	PWY-5686	UMP biosynthesis
RPA0339	PWY-2941	L-lysine biosynthesis II
RPA0339	PWY-2942	L-lysine biosynthesis III
RPA0339	PWY-5097	L-lysine biosynthesis VI
RPA0340	PWY-1042	glycolysis IV (plant cytosol)
RPA0340	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RPA0340	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPA0340	PWY-5723	Rubisco shunt
RPA0340	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPA0340	PWY-6886	1-butanol autotrophic biosynthesis
RPA0340	PWY-6901	superpathway of glucose and xylose degradation
RPA0340	PWY-7003	glycerol degradation to butanol
RPA0340	PWY-7124	ethylene biosynthesis V (engineered)
RPA0340	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RPA0345	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPA0345	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPA0360	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPA0360	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPA0374	PWY-3162	L-tryptophan degradation V (side chain pathway)
RPA0374	PWY-5057	L-valine degradation II
RPA0374	PWY-5076	L-leucine degradation III
RPA0374	PWY-5078	L-isoleucine degradation II
RPA0374	PWY-5079	L-phenylalanine degradation III
RPA0374	PWY-5082	L-methionine degradation III
RPA0374	PWY-5480	pyruvate fermentation to ethanol I
RPA0374	PWY-5486	pyruvate fermentation to ethanol II
RPA0374	PWY-5751	phenylethanol biosynthesis
RPA0374	PWY-6028	acetoin degradation
RPA0374	PWY-6313	serotonin degradation
RPA0374	PWY-6333	acetaldehyde biosynthesis I
RPA0374	PWY-6342	noradrenaline and adrenaline degradation
RPA0374	PWY-6587	pyruvate fermentation to ethanol III
RPA0374	PWY-6802	salidroside biosynthesis
RPA0374	PWY-6871	3-methylbutanol biosynthesis
RPA0374	PWY-7013	L-1,2-propanediol degradation
RPA0374	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPA0374	PWY-7118	chitin degradation to ethanol
RPA0374	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RPA0374	PWY-7557	dehydrodiconiferyl alcohol degradation
RPA0381	PWY-622	starch biosynthesis
RPA0382	PWY-622	starch biosynthesis
RPA0391	PWY-5491	diethylphosphate degradation
RPA0392	PWY-4983	L-citrulline-nitric oxide cycle
RPA0392	PWY-4984	urea cycle
RPA0392	PWY-5	canavanine biosynthesis
RPA0392	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPA0392	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPA0404	PWY-7158	L-phenylalanine degradation V
RPA0413	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
RPA0413	PWY-2201	folate transformations I
RPA0413	PWY-3841	folate transformations II
RPA0413	PWY-5030	L-histidine degradation III
RPA0413	PWY-5497	purine nucleobases degradation II (anaerobic)
RPA0413	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
RPA0425	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPA0425	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPA0425	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPA0425	PWY-5994	palmitate biosynthesis I (animals and fungi)
RPA0425	PWY-6113	superpathway of mycolate biosynthesis
RPA0425	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPA0425	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPA0425	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPA0425	PWYG-321	mycolate biosynthesis
RPA0427	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPA0427	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPA0427	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPA0427	PWY-6113	superpathway of mycolate biosynthesis
RPA0427	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPA0427	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPA0427	PWY-7096	triclosan resistance
RPA0427	PWYG-321	mycolate biosynthesis
RPA0471	PWY-6167	flavin biosynthesis II (archaea)
RPA0496	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
RPA0498	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
RPA0503	PWY-6164	3-dehydroquinate biosynthesis I
RPA0504	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPA0508	PWY-4381	fatty acid biosynthesis initiation I
RPA0508	PWY-5743	3-hydroxypropanoate cycle
RPA0508	PWY-5744	glyoxylate assimilation
RPA0508	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPA0508	PWY-6679	jadomycin biosynthesis
RPA0508	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPA0513	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPA0513	PWY-2361	3-oxoadipate degradation
RPA0513	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
RPA0519	PWY-7560	methylerythritol phosphate pathway II
RPA0532	PWY-5676	acetyl-CoA fermentation to butanoate II
RPA0532	PWY-5741	ethylmalonyl-CoA pathway
RPA0532	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RPA0553	PWY-5692	allantoin degradation to glyoxylate II
RPA0553	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
RPA0554	PWY-5694	allantoin degradation to glyoxylate I
RPA0554	PWY-5705	allantoin degradation to glyoxylate III
RPA0557	PWY-6936	seleno-amino acid biosynthesis
RPA0558	PWY-6123	inosine-5'-phosphate biosynthesis I
RPA0558	PWY-6124	inosine-5'-phosphate biosynthesis II
RPA0558	PWY-7234	inosine-5'-phosphate biosynthesis III
RPA0592	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPA0603	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
RPA0603	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
RPA0603	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
RPA0603	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
RPA0603	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
RPA0603	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
RPA0603	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
RPA0603	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
RPA0603	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
RPA0603	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
RPA0604	PWY-2941	L-lysine biosynthesis II
RPA0604	PWY-2942	L-lysine biosynthesis III
RPA0604	PWY-5097	L-lysine biosynthesis VI
RPA0604	PWY-6559	spermidine biosynthesis II
RPA0604	PWY-6562	norspermidine biosynthesis
RPA0604	PWY-7153	grixazone biosynthesis
RPA0610	PWY-5386	methylglyoxal degradation I
RPA0613	PWY-5381	pyridine nucleotide cycling (plants)
RPA0629	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPA0629	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPA0653	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
RPA0653	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
RPA0670	PWY-6080	4-ethylphenol degradation (anaerobic)
RPA0670	PWY-7046	4-coumarate degradation (anaerobic)
RPA0671	PWY-6080	4-ethylphenol degradation (anaerobic)
RPA0671	PWY-7046	4-coumarate degradation (anaerobic)
RPA0672	PWY-6080	4-ethylphenol degradation (anaerobic)
RPA0672	PWY-7046	4-coumarate degradation (anaerobic)
RPA0676	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPA0677	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPA0678	PWY-101	photosynthesis light reactions
RPA0678	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
RPA0687	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RPA0687	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RPA0688	PWY-5532	adenosine nucleotides degradation IV
RPA0689	PWY-7399	methylphosphonate degradation II
RPA0690	PWY-7399	methylphosphonate degradation II
RPA0692	PWY-7399	methylphosphonate degradation II
RPA0695	PWY-7399	methylphosphonate degradation II
RPA0702	PWY-7399	methylphosphonate degradation II
RPA0703	PWY-5532	adenosine nucleotides degradation IV
RPA0711	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPA0711	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
RPA0712	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPA0712	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPA0712	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPA0714	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPA0714	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPA0714	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPA0717	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPA0717	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPA0717	PWY-6268	adenosylcobalamin salvage from cobalamin
RPA0717	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPA0721	PWY-5443	aminopropanol phosphate biosynthesis I
RPA0734	PWY-1881	formate oxidation to CO<sub>2</sub>
RPA0734	PWY-5497	purine nucleobases degradation II (anaerobic)
RPA0734	PWY-6696	oxalate degradation III
RPA0746	PWY-5674	nitrate reduction IV (dissimilatory)
RPA0753	PWY-5340	sulfate activation for sulfonation
RPA0756	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPA0776	PWY-4041	&gamma;-glutamyl cycle
RPA0776	PWY-5826	hypoglycin biosynthesis
RPA0789	PWY-6832	2-aminoethylphosphonate degradation II
RPA0794	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPA0794	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPA0794	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPA0794	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPA0797	PWY-5686	UMP biosynthesis
RPA0799	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPA0799	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPA0799	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPA0799	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPA0818	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPA0818	PWY-5109	2-methylbutanoate biosynthesis
RPA0818	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RPA0818	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RPA0818	PWY-5177	glutaryl-CoA degradation
RPA0818	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPA0818	PWY-6435	4-hydroxybenzoate biosynthesis V
RPA0818	PWY-6583	pyruvate fermentation to butanol I
RPA0818	PWY-6863	pyruvate fermentation to hexanol
RPA0818	PWY-6883	pyruvate fermentation to butanol II
RPA0818	PWY-6944	androstenedione degradation
RPA0818	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RPA0818	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RPA0818	PWY-7007	methyl ketone biosynthesis
RPA0818	PWY-7046	4-coumarate degradation (anaerobic)
RPA0818	PWY-7094	fatty acid salvage
RPA0818	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RPA0818	PWY-735	jasmonic acid biosynthesis
RPA0818	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RPA0822	PWY-6840	homoglutathione biosynthesis
RPA0822	PWY-7255	ergothioneine biosynthesis I (bacteria)
RPA0832	PWY-3781	aerobic respiration I (cytochrome c)
RPA0832	PWY-4521	arsenite oxidation I (respiratory)
RPA0832	PWY-6692	Fe(II) oxidation
RPA0832	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPA0854	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPA0854	PWY-7536	2-amino-3-hydroxycyclopent-2-enone biosynthesis
RPA0887	PWY-3801	sucrose degradation II (sucrose synthase)
RPA0887	PWY-6527	stachyose degradation
RPA0887	PWY-6981	chitin biosynthesis
RPA0887	PWY-7238	sucrose biosynthesis II
RPA0887	PWY-7343	UDP-glucose biosynthesis
RPA0898	PWY-2941	L-lysine biosynthesis II
RPA0898	PWY-2942	L-lysine biosynthesis III
RPA0898	PWY-5097	L-lysine biosynthesis VI
RPA0909	PWY-6785	hydrogen production VIII
RPA0937	PWY-2301	<i>myo</i>-inositol biosynthesis
RPA0937	PWY-4702	phytate degradation I
RPA0937	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
RPA0939	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RPA0939	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RPA0939	PWY-6897	thiamin salvage II
RPA0939	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RPA0939	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RPA0939	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
RPA0939	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RPA0940	PWY-1042	glycolysis IV (plant cytosol)
RPA0940	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPA0940	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPA0940	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPA0940	PWY-7385	1,3-propanediol biosynthesis (engineered)
RPA0943	PWY-1042	glycolysis IV (plant cytosol)
RPA0943	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPA0943	PWY-6886	1-butanol autotrophic biosynthesis
RPA0943	PWY-6901	superpathway of glucose and xylose degradation
RPA0943	PWY-7003	glycerol degradation to butanol
RPA0944	PWY-1042	glycolysis IV (plant cytosol)
RPA0944	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPA0944	PWY-6901	superpathway of glucose and xylose degradation
RPA0944	PWY-7003	glycerol degradation to butanol
RPA0945	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPA0945	PWY-5723	Rubisco shunt
RPA0945	PWY-6891	thiazole biosynthesis II (Bacillus)
RPA0945	PWY-6892	thiazole biosynthesis I (E. coli)
RPA0945	PWY-6901	superpathway of glucose and xylose degradation
RPA0945	PWY-7560	methylerythritol phosphate pathway II
RPA0952	PWY-6891	thiazole biosynthesis II (Bacillus)
RPA0952	PWY-6892	thiazole biosynthesis I (E. coli)
RPA0952	PWY-7560	methylerythritol phosphate pathway II
RPA0984	PWY-381	nitrate reduction II (assimilatory)
RPA0984	PWY-5675	nitrate reduction V (assimilatory)
RPA0984	PWY-6549	L-glutamine biosynthesis III
RPA0984	PWY-6963	ammonia assimilation cycle I
RPA0984	PWY-6964	ammonia assimilation cycle II
RPA1002	PWY-5381	pyridine nucleotide cycling (plants)
RPA1016	PWY-3781	aerobic respiration I (cytochrome c)
RPA1016	PWY-6692	Fe(II) oxidation
RPA1016	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
RPA1016	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPA1039	PWY-7560	methylerythritol phosphate pathway II
RPA1051	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPA1051	PWY-6549	L-glutamine biosynthesis III
RPA1051	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPA1051	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPA1053	PWY-5316	nicotine biosynthesis
RPA1053	PWY-5381	pyridine nucleotide cycling (plants)
RPA1053	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
RPA1053	PWY-7342	superpathway of nicotine biosynthesis
RPA1054	PWY-5316	nicotine biosynthesis
RPA1054	PWY-7342	superpathway of nicotine biosynthesis
RPA1055	PWY-5316	nicotine biosynthesis
RPA1055	PWY-7342	superpathway of nicotine biosynthesis
RPA1069	PWY-5686	UMP biosynthesis
RPA1076	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPA1076	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPA1093	PWY-6167	flavin biosynthesis II (archaea)
RPA1093	PWY-6168	flavin biosynthesis III (fungi)
RPA1093	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RPA1130	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPA1130	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPA1131	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPA1131	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPA1162	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPA1162	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPA1162	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPA1168	PWY-6823	molybdenum cofactor biosynthesis
RPA1170	PWY-5269	cardiolipin biosynthesis II
RPA1170	PWY-5668	cardiolipin biosynthesis I
RPA1190	PWY-6703	preQ<sub>0</sub> biosynthesis
RPA1192	PWY-3781	aerobic respiration I (cytochrome c)
RPA1192	PWY-6692	Fe(II) oxidation
RPA1192	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
RPA1192	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPA1196	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RPA1196	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RPA1199	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPA1199	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPA1199	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPA1199	PWY-6113	superpathway of mycolate biosynthesis
RPA1199	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPA1199	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPA1199	PWY-7096	triclosan resistance
RPA1199	PWYG-321	mycolate biosynthesis
RPA1201	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPA1229	PWY-1341	phenylacetate degradation II (anaerobic)
RPA1229	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
RPA1257	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPA1257	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPA1257	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPA1261	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPA1261	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPA1276	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPA1276	PWY-5686	UMP biosynthesis
RPA1276	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPA1298	PWY-4381	fatty acid biosynthesis initiation I
RPA1329	PWY-5392	reductive TCA cycle II
RPA1329	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPA1329	PWY-5690	TCA cycle II (plants and fungi)
RPA1329	PWY-5913	TCA cycle VI (obligate autotrophs)
RPA1329	PWY-6728	methylaspartate cycle
RPA1329	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPA1329	PWY-7254	TCA cycle VII (acetate-producers)
RPA1329	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPA1331	PWY-7254	TCA cycle VII (acetate-producers)
RPA1369	PWY-723	alkylnitronates degradation
RPA1377	PWY-5386	methylglyoxal degradation I
RPA1388	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPA1388	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPA1401	PWY-381	nitrate reduction II (assimilatory)
RPA1401	PWY-5675	nitrate reduction V (assimilatory)
RPA1401	PWY-6549	L-glutamine biosynthesis III
RPA1401	PWY-6963	ammonia assimilation cycle I
RPA1401	PWY-6964	ammonia assimilation cycle II
RPA1402	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPA1404	PWY-5169	cyanurate degradation
RPA1404	PWY-5703	urea degradation I
RPA1404	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPA1405	PWY-5169	cyanurate degradation
RPA1405	PWY-5703	urea degradation I
RPA1424	PWY-6823	molybdenum cofactor biosynthesis
RPA1424	PWY-6891	thiazole biosynthesis II (Bacillus)
RPA1424	PWY-6892	thiazole biosynthesis I (E. coli)
RPA1424	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RPA1433	PWY-4041	&gamma;-glutamyl cycle
RPA1450	PWY-4381	fatty acid biosynthesis initiation I
RPA1450	PWY-5743	3-hydroxypropanoate cycle
RPA1450	PWY-5744	glyoxylate assimilation
RPA1450	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPA1450	PWY-6679	jadomycin biosynthesis
RPA1450	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPA1456	PWY-3781	aerobic respiration I (cytochrome c)
RPA1456	PWY-4521	arsenite oxidation I (respiratory)
RPA1456	PWY-6692	Fe(II) oxidation
RPA1456	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPA1463	PWY-5101	L-isoleucine biosynthesis II
RPA1463	PWY-5103	L-isoleucine biosynthesis III
RPA1463	PWY-5104	L-isoleucine biosynthesis IV
RPA1463	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPA1466	PWY-5169	cyanurate degradation
RPA1466	PWY-5703	urea degradation I
RPA1466	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPA1469	PWY-5169	cyanurate degradation
RPA1469	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPA1484	PWY-2723	trehalose degradation V
RPA1484	PWY-3801	sucrose degradation II (sucrose synthase)
RPA1484	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
RPA1484	PWY-5661	GDP-glucose biosynthesis
RPA1484	PWY-5661-1	RPA1484
RPA1484	PWY-5940	streptomycin biosynthesis
RPA1484	PWY-5941	glycogen degradation II (eukaryotic)
RPA1484	PWY-622	starch biosynthesis
RPA1484	PWY-6731	starch degradation III
RPA1484	PWY-6737	starch degradation V
RPA1484	PWY-6749	CMP-legionaminate biosynthesis I
RPA1484	PWY-7238	sucrose biosynthesis II
RPA1484	PWY-7343	UDP-glucose biosynthesis
RPA1505	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPA1505	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPA1506	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPA1506	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPA1507	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPA1507	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPA1509	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPA1509	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPA1511	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPA1511	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPA1514	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPA1514	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPA1522	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
RPA1523	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
RPA1523	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPA1523	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPA1524	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
RPA1524	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPA1524	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPA1527	PWY-101	photosynthesis light reactions
RPA1527	PWY-6785	hydrogen production VIII
RPA1528	PWY-101	photosynthesis light reactions
RPA1528	PWY-6785	hydrogen production VIII
RPA1539	PWY-5874	heme degradation
RPA1539	PWY-5915	phycoerythrobilin biosynthesis I
RPA1539	PWY-5917	phycocyanobilin biosynthesis
RPA1539	PWY-7170	phytochromobilin biosynthesis
RPA1542	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPA1542	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPA1543	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPA1543	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPA1544	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPA1544	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPA1545	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPA1545	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPA1546	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPA1546	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPA1554	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPA1554	PWY-7536	2-amino-3-hydroxycyclopent-2-enone biosynthesis
RPA1559	PWY-5532	adenosine nucleotides degradation IV
RPA1559	PWY-5723	Rubisco shunt
RPA1560	PWY-5532	adenosine nucleotides degradation IV
RPA1560	PWY-5723	Rubisco shunt
RPA1569	PWY-5344	L-homocysteine biosynthesis
RPA1569	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RPA1580	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
RPA1580	PWY-6853	ethylene biosynthesis II (microbes)
RPA1580	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RPA1592	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPA1592	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPA1597	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPA1597	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPA1597	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPA1633	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPA1686	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
RPA1686	PWY-7494	choline degradation IV
RPA1693	PWY-6854	ethylene biosynthesis III (microbes)
RPA1696	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RPA1696	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RPA1700	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPA1720	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RPA1720	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RPA1723	PWY-1341	phenylacetate degradation II (anaerobic)
RPA1723	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
RPA1734	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPA1736	PWY-3121	linamarin degradation
RPA1736	PWY-5176	coumarin biosynthesis (via 2-coumarate)
RPA1736	PWY-6002	lotaustralin degradation
RPA1736	PWY-6788	cellulose degradation II (fungi)
RPA1736	PWY-7089	taxiphyllin bioactivation
RPA1736	PWY-7091	linustatin bioactivation
RPA1736	PWY-7092	neolinustatin bioactivation
RPA1772	PWY-1622	formaldehyde assimilation I (serine pathway)
RPA1772	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPA1772	PWY-5913	TCA cycle VI (obligate autotrophs)
RPA1772	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPA1772	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
RPA1772	PWY-6549	L-glutamine biosynthesis III
RPA1772	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPA1772	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPA1772	PWY-7124	ethylene biosynthesis V (engineered)
RPA1778	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPA1781	PWY-6215	4-chlorobenzoate degradation
RPA1830	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPA1830	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPA1830	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPA1830	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPA1831	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPA1831	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPA1831	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPA1831	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPA1835	PWY-5743	3-hydroxypropanoate cycle
RPA1835	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPA1835	PWY-6728	methylaspartate cycle
RPA1835	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPA1836	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RPA1837	PWY-5743	3-hydroxypropanoate cycle
RPA1837	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPA1837	PWY-6728	methylaspartate cycle
RPA1837	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPA1838	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RPA1838	PWY-6148	tetrahydromethanopterin biosynthesis
RPA1838	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RPA1838	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RPA1839	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RPA1839	PWY-6148	tetrahydromethanopterin biosynthesis
RPA1839	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RPA1839	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RPA1840	PWY-6614	tetrahydrofolate biosynthesis
RPA1907	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RPA1923	PWY-7142	cyanide detoxification II
RPA1941	PWY-723	alkylnitronates degradation
RPA1943	PWY-6654	phosphopantothenate biosynthesis III
RPA1945	PWY-6695	oxalate degradation II
RPA1948	PWY-6420	pyrroloquinoline quinone biosynthesis
RPA1950	PWY-6823	molybdenum cofactor biosynthesis
RPA1955	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RPA1955	PWY-3162	L-tryptophan degradation V (side chain pathway)
RPA1955	PWY-5057	L-valine degradation II
RPA1955	PWY-5076	L-leucine degradation III
RPA1955	PWY-5078	L-isoleucine degradation II
RPA1955	PWY-5079	L-phenylalanine degradation III
RPA1955	PWY-5082	L-methionine degradation III
RPA1955	PWY-5480	pyruvate fermentation to ethanol I
RPA1955	PWY-5486	pyruvate fermentation to ethanol II
RPA1955	PWY-5751	phenylethanol biosynthesis
RPA1955	PWY-6028	acetoin degradation
RPA1955	PWY-6313	serotonin degradation
RPA1955	PWY-6333	acetaldehyde biosynthesis I
RPA1955	PWY-6342	noradrenaline and adrenaline degradation
RPA1955	PWY-6587	pyruvate fermentation to ethanol III
RPA1955	PWY-6802	salidroside biosynthesis
RPA1955	PWY-6871	3-methylbutanol biosynthesis
RPA1955	PWY-7013	L-1,2-propanediol degradation
RPA1955	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPA1955	PWY-7118	chitin degradation to ethanol
RPA1955	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RPA1955	PWY-7557	dehydrodiconiferyl alcohol degradation
RPA1978	PWY-6823	molybdenum cofactor biosynthesis
RPA1980	PWY-181	photorespiration
RPA1981	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPA1981	PWY-5723	Rubisco shunt
RPA1983	PWY-4081	glutathione redox reactions I
RPA1984	PWY-6164	3-dehydroquinate biosynthesis I
RPA1985	PWY-7039	phosphatidate metabolism, as a signaling molecule
RPA2000	PWY-5101	L-isoleucine biosynthesis II
RPA2000	PWY-6871	3-methylbutanol biosynthesis
RPA2002	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPA2002	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPA2006	PWY-5669	phosphatidylethanolamine biosynthesis I
RPA2007	PWY-5669	phosphatidylethanolamine biosynthesis I
RPA2021	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPA2021	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPA2021	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPA2021	PWY-5994	palmitate biosynthesis I (animals and fungi)
RPA2021	PWY-6113	superpathway of mycolate biosynthesis
RPA2021	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPA2021	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPA2021	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPA2021	PWYG-321	mycolate biosynthesis
RPA2030	PWY-2781	<i>cis</i>-zeatin biosynthesis
RPA2031	PWY-5101	L-isoleucine biosynthesis II
RPA2031	PWY-5103	L-isoleucine biosynthesis III
RPA2031	PWY-5104	L-isoleucine biosynthesis IV
RPA2031	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
RPA2031	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RPA2031	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RPA2031	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPA2032	PWY-5101	L-isoleucine biosynthesis II
RPA2032	PWY-5103	L-isoleucine biosynthesis III
RPA2032	PWY-5104	L-isoleucine biosynthesis IV
RPA2032	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
RPA2032	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RPA2032	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RPA2032	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPA2035	PWY-5101	L-isoleucine biosynthesis II
RPA2035	PWY-5103	L-isoleucine biosynthesis III
RPA2035	PWY-5104	L-isoleucine biosynthesis IV
RPA2035	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPA2045	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RPA2046	PWY-6871	3-methylbutanol biosynthesis
RPA2061	PWY-6748	nitrate reduction VII (denitrification)
RPA2061	PWY-7084	nitrifier denitrification
RPA2082	PWY-5194	siroheme biosynthesis
RPA2082	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RPA2084	PWY-5194	siroheme biosynthesis
RPA2084	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RPA2086	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RPA2089	PWY-5194	siroheme biosynthesis
RPA2089	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RPA2094	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPA2094	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPA2094	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPA2095	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPA2095	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPA2095	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPA2097	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
RPA2143	PWY-4381	fatty acid biosynthesis initiation I
RPA2143	PWY-5743	3-hydroxypropanoate cycle
RPA2143	PWY-5744	glyoxylate assimilation
RPA2143	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPA2143	PWY-6679	jadomycin biosynthesis
RPA2143	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPA2155	PWY-5101	L-isoleucine biosynthesis II
RPA2155	PWY-5103	L-isoleucine biosynthesis III
RPA2155	PWY-5104	L-isoleucine biosynthesis IV
RPA2155	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPA2169	PWY-5532	adenosine nucleotides degradation IV
RPA2169	PWY-5723	Rubisco shunt
RPA2181	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RPA2181	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RPA2181	PWY-6936	seleno-amino acid biosynthesis
RPA2181	PWY-702	L-methionine biosynthesis II
RPA2200	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RPA2200	PWY-6596	adenosine nucleotides degradation I
RPA2200	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RPA2203	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RPA2257	PWY-4202	arsenate detoxification I (glutaredoxin)
RPA2257	PWY-4621	arsenate detoxification II (glutaredoxin)
RPA2261	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RPA2271	PWY-1042	glycolysis IV (plant cytosol)
RPA2271	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RPA2271	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPA2271	PWY-5723	Rubisco shunt
RPA2271	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPA2271	PWY-6886	1-butanol autotrophic biosynthesis
RPA2271	PWY-6901	superpathway of glucose and xylose degradation
RPA2271	PWY-7003	glycerol degradation to butanol
RPA2271	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RPA2271	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPA2331	PWY-4041	&gamma;-glutamyl cycle
RPA2331	PWY-5826	hypoglycin biosynthesis
RPA2341	PWY-5101	L-isoleucine biosynthesis II
RPA2341	PWY-5103	L-isoleucine biosynthesis III
RPA2341	PWY-5104	L-isoleucine biosynthesis IV
RPA2341	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPA2349	PWY-5344	L-homocysteine biosynthesis
RPA2349	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RPA2350	PWY-5344	L-homocysteine biosynthesis
RPA2350	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RPA2352	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
RPA2352	PWY-5389	3-methylthiopropanoate biosynthesis
RPA2354	PWY-6823	molybdenum cofactor biosynthesis
RPA2362	PWY-5344	L-homocysteine biosynthesis
RPA2362	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RPA2395	PWY-5747	2-methylcitrate cycle II
RPA2397	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RPA2397	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RPA2397	PWY-6936	seleno-amino acid biosynthesis
RPA2397	PWY-702	L-methionine biosynthesis II
RPA2437	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPA2437	PWY-6416	quinate degradation II
RPA2437	PWY-6707	gallate biosynthesis
RPA2463	PWY-6823	molybdenum cofactor biosynthesis
RPA2463	PWY-6891	thiazole biosynthesis II (Bacillus)
RPA2463	PWY-6892	thiazole biosynthesis I (E. coli)
RPA2463	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RPA2467	PWY-6823	molybdenum cofactor biosynthesis
RPA2467	PWY-6891	thiazole biosynthesis II (Bacillus)
RPA2467	PWY-6892	thiazole biosynthesis I (E. coli)
RPA2467	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RPA2491	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPA2491	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPA2500	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPA2505	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPA2507	PWY-7425	2-chloroacrylate degradation I
RPA2512	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RPA2512	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RPA2512	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
RPA2538	PWY-4381	fatty acid biosynthesis initiation I
RPA2538	PWY-5743	3-hydroxypropanoate cycle
RPA2538	PWY-5744	glyoxylate assimilation
RPA2538	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPA2538	PWY-6679	jadomycin biosynthesis
RPA2538	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPA2559	PWY-6936	seleno-amino acid biosynthesis
RPA2587	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RPA2587	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
RPA2587	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
RPA2590	PWY-7560	methylerythritol phosphate pathway II
RPA2605	PWY-6700	queuosine biosynthesis
RPA2606	PWY-6700	queuosine biosynthesis
RPA2619	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
RPA2619	PWY-7494	choline degradation IV
RPA2634	PWY-6823	molybdenum cofactor biosynthesis
RPA2659	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RPA2660	PWY-6749	CMP-legionaminate biosynthesis I
RPA2672	PWY-6826	phosphatidylcholine biosynthesis VI
RPA2686	PWY-2941	L-lysine biosynthesis II
RPA2686	PWY-2942	L-lysine biosynthesis III
RPA2686	PWY-5097	L-lysine biosynthesis VI
RPA2695	PWY-6012	acyl carrier protein metabolism I
RPA2695	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
RPA2712	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPA2712	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPA2724	PWY-1622	formaldehyde assimilation I (serine pathway)
RPA2724	PWY-181	photorespiration
RPA2724	PWY-2161	folate polyglutamylation
RPA2724	PWY-2201	folate transformations I
RPA2724	PWY-3661	glycine betaine degradation I
RPA2724	PWY-3661-1	glycine betaine degradation II (mammalian)
RPA2724	PWY-3841	folate transformations II
RPA2724	PWY-5497	purine nucleobases degradation II (anaerobic)
RPA2727	PWY-6167	flavin biosynthesis II (archaea)
RPA2727	PWY-6168	flavin biosynthesis III (fungi)
RPA2727	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPA2728	PWY-6167	flavin biosynthesis II (archaea)
RPA2728	PWY-6168	flavin biosynthesis III (fungi)
RPA2730	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RPA2730	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RPA2730	PWY-6896	thiamin salvage I
RPA2730	PWY-6897	thiamin salvage II
RPA2741	PWY-4381	fatty acid biosynthesis initiation I
RPA2750	PWY-6655	xanthan biosynthesis
RPA2750	PWY-6658	acetan biosynthesis
RPA2763	PWY-5344	L-homocysteine biosynthesis
RPA2763	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RPA2774	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RPA2774	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RPA2775	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RPA2775	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPA2775	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPA2775	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
RPA2775	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RPA2775	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RPA2795	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPA2796	PWY-1622	formaldehyde assimilation I (serine pathway)
RPA2796	PWY-181	photorespiration
RPA2796	PWY-2161	folate polyglutamylation
RPA2796	PWY-2201	folate transformations I
RPA2796	PWY-3661	glycine betaine degradation I
RPA2796	PWY-3661-1	glycine betaine degradation II (mammalian)
RPA2796	PWY-3841	folate transformations II
RPA2796	PWY-5497	purine nucleobases degradation II (anaerobic)
RPA2799	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RPA2799	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RPA2805	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
RPA2805	PWY-581	indole-3-acetate biosynthesis II
RPA2805	PWY-7308	acrylonitrile degradation I
RPA2806	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
RPA2806	PWY-581	indole-3-acetate biosynthesis II
RPA2806	PWY-7308	acrylonitrile degradation I
RPA2807	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
RPA2807	PWY-581	indole-3-acetate biosynthesis II
RPA2807	PWY-7308	acrylonitrile degradation I
RPA2810	PWY-6703	preQ<sub>0</sub> biosynthesis
RPA2841	PWY-5381	pyridine nucleotide cycling (plants)
RPA2841	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RPA2841	PWY-6596	adenosine nucleotides degradation I
RPA2841	PWY-6606	guanosine nucleotides degradation II
RPA2841	PWY-6607	guanosine nucleotides degradation I
RPA2841	PWY-6608	guanosine nucleotides degradation III
RPA2841	PWY-7185	UTP and CTP dephosphorylation I
RPA2845	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
RPA2863	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
RPA2863	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RPA2874	PWY-1042	glycolysis IV (plant cytosol)
RPA2874	PWY-1622	formaldehyde assimilation I (serine pathway)
RPA2874	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RPA2874	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPA2874	PWY-5723	Rubisco shunt
RPA2874	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPA2874	PWY-6886	1-butanol autotrophic biosynthesis
RPA2874	PWY-6901	superpathway of glucose and xylose degradation
RPA2874	PWY-7003	glycerol degradation to butanol
RPA2874	PWY-7124	ethylene biosynthesis V (engineered)
RPA2874	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RPA2875	PWY-6700	queuosine biosynthesis
RPA2879	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RPA2879	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
RPA2886	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
RPA2886	PWY-7177	UTP and CTP dephosphorylation II
RPA2886	PWY-7185	UTP and CTP dephosphorylation I
RPA2888	PWY-1042	glycolysis IV (plant cytosol)
RPA2888	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPA2888	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPA2888	PWY-7003	glycerol degradation to butanol
RPA2902	PWY-6823	molybdenum cofactor biosynthesis
RPA2905	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPA2906	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPA2912	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPA2912	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPA2912	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPA2912	PWY-5994	palmitate biosynthesis I (animals and fungi)
RPA2912	PWY-6113	superpathway of mycolate biosynthesis
RPA2912	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPA2912	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPA2912	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPA2912	PWYG-321	mycolate biosynthesis
RPA2916	PWY-7560	methylerythritol phosphate pathway II
RPA2934	PWY-5743	3-hydroxypropanoate cycle
RPA2934	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPA2934	PWY-6728	methylaspartate cycle
RPA2934	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPA2936	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RPA2936	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
RPA2938	PWY-3781	aerobic respiration I (cytochrome c)
RPA2938	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RPA2938	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RPA2938	PWY-6692	Fe(II) oxidation
RPA2939	PWY-3781	aerobic respiration I (cytochrome c)
RPA2939	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RPA2939	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RPA2939	PWY-6692	Fe(II) oxidation
RPA2965	PWY-6938	NADH repair
RPA2967	PWY-381	nitrate reduction II (assimilatory)
RPA2967	PWY-5675	nitrate reduction V (assimilatory)
RPA2967	PWY-6549	L-glutamine biosynthesis III
RPA2967	PWY-6963	ammonia assimilation cycle I
RPA2967	PWY-6964	ammonia assimilation cycle II
RPA2971	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RPA2974	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPA2977	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RPA2977	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPA2977	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RPA2977	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RPA2977	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPA2977	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPA2977	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPA2977	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RPA2998	PWY-2941	L-lysine biosynthesis II
RPA2998	PWY-2942	L-lysine biosynthesis III
RPA2998	PWY-5097	L-lysine biosynthesis VI
RPA3040	PWY-3841	folate transformations II
RPA3040	PWY-6614	tetrahydrofolate biosynthesis
RPA3042	PWY-1281	sulfoacetaldehyde degradation I
RPA3042	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPA3042	PWY-5482	pyruvate fermentation to acetate II
RPA3042	PWY-5485	pyruvate fermentation to acetate IV
RPA3042	PWY-5497	purine nucleobases degradation II (anaerobic)
RPA3042	PWY-6637	sulfolactate degradation II
RPA3042	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPA3050	PWY-5269	cardiolipin biosynthesis II
RPA3050	PWY-5668	cardiolipin biosynthesis I
RPA3051	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPA3051	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPA3051	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPA3052	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPA3052	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
RPA3056	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RPA3056	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
RPA3056	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPA3056	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPA3056	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
RPA3056	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RPA3056	PWY-7205	CMP phosphorylation
RPA3056	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RPA3056	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPA3056	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RPA3056	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPA3056	PWY-7224	purine deoxyribonucleosides salvage
RPA3056	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPA3056	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RPA3060	PWY-5988	wound-induced proteolysis I
RPA3060	PWY-6018	seed germination protein turnover
RPA3069	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RPA3074	PWY-5367	petroselinate biosynthesis
RPA3074	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPA3074	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPA3074	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPA3074	PWY-5994	palmitate biosynthesis I (animals and fungi)
RPA3074	PWY-6113	superpathway of mycolate biosynthesis
RPA3074	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPA3074	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPA3074	PWY-6951	RPA3074
RPA3074	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
RPA3074	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPA3074	PWYG-321	mycolate biosynthesis
RPA3075	PWY-4381	fatty acid biosynthesis initiation I
RPA3075	PWY-6799	fatty acid biosynthesis (plant mitochondria)
RPA3075	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPA3085	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPA3091	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPA3091	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPA3091	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPA3091	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RPA3098	PWY-6654	phosphopantothenate biosynthesis III
RPA3107	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPA3112	PWY-723	alkylnitronates degradation
RPA3116	PWY-5081	L-tryptophan degradation VIII (to tryptophol)
RPA3117	PWY-5686	UMP biosynthesis
RPA3118	PWY-5686	UMP biosynthesis
RPA3169	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RPA3169	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
RPA3174	PWY-6339	syringate degradation
RPA3203	PWY-4381	fatty acid biosynthesis initiation I
RPA3203	PWY-5743	3-hydroxypropanoate cycle
RPA3203	PWY-5744	glyoxylate assimilation
RPA3203	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPA3203	PWY-6679	jadomycin biosynthesis
RPA3203	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPA3229	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPA3279	PWY-5874	heme degradation
RPA3279	PWY-5915	phycoerythrobilin biosynthesis I
RPA3279	PWY-5917	phycocyanobilin biosynthesis
RPA3279	PWY-7170	phytochromobilin biosynthesis
RPA3298	PWY-6857	retinol biosynthesis
RPA3306	PWY-6523	nitrite-dependent anaerobic methane oxidation
RPA3306	PWY-6748	nitrate reduction VII (denitrification)
RPA3306	PWY-7084	nitrifier denitrification
RPA3310	PWY-5506	methanol oxidation to formaldehyde IV
RPA3321	PWY-6749	CMP-legionaminate biosynthesis I
RPA3322	PWY-5659	GDP-mannose biosynthesis
RPA3322	PWY-6073	alginate biosynthesis I (algal)
RPA3322	PWY-6082	alginate biosynthesis II (bacterial)
RPA3322	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
RPA3336	PWY-6012	acyl carrier protein metabolism I
RPA3336	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
RPA3374	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RPA3374	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RPA3374	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
RPA3391	PWY-5663	tetrahydrobiopterin biosynthesis I
RPA3391	PWY-5664	tetrahydrobiopterin biosynthesis II
RPA3391	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RPA3391	PWY-6703	preQ<sub>0</sub> biosynthesis
RPA3391	PWY-6983	tetrahydrobiopterin biosynthesis III
RPA3391	PWY-7442	drosopterin and aurodrosopterin biosynthesis
RPA3429	PWY-6936	seleno-amino acid biosynthesis
RPA3429	PWY-7274	D-cycloserine biosynthesis
RPA3440	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPA3442	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
RPA3442	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
RPA3450	PWY-5642	2,4-dinitrotoluene degradation
RPA3450	PWY-6373	acrylate degradation
RPA3455	PWY-4381	fatty acid biosynthesis initiation I
RPA3455	PWY-5743	3-hydroxypropanoate cycle
RPA3455	PWY-5744	glyoxylate assimilation
RPA3455	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPA3455	PWY-6679	jadomycin biosynthesis
RPA3455	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPA3472	PWY-5101	L-isoleucine biosynthesis II
RPA3472	PWY-5103	L-isoleucine biosynthesis III
RPA3472	PWY-5104	L-isoleucine biosynthesis IV
RPA3472	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPA3492	PWY-3841	folate transformations II
RPA3492	PWY-6614	tetrahydrofolate biosynthesis
RPA3493	PWY-3841	folate transformations II
RPA3493	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPA3493	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPA3493	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RPA3493	PWY-7199	pyrimidine deoxyribonucleosides salvage
RPA3493	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RPA3500	PWY-5392	reductive TCA cycle II
RPA3500	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPA3500	PWY-5690	TCA cycle II (plants and fungi)
RPA3500	PWY-5913	TCA cycle VI (obligate autotrophs)
RPA3500	PWY-6728	methylaspartate cycle
RPA3500	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPA3500	PWY-7254	TCA cycle VII (acetate-producers)
RPA3500	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPA3503	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPA3503	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPA3525	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPA3525	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPA3528	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPA3528	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPA3529	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPA3529	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPA3530	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RPA3530	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
RPA3530	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RPA3530	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RPA3532	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPA3532	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPA3533	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RPA3533	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RPA3533	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RPA3534	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPA3534	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPA3554	PWY-4202	arsenate detoxification I (glutaredoxin)
RPA3554	PWY-4621	arsenate detoxification II (glutaredoxin)
RPA3562	PWY-4202	arsenate detoxification I (glutaredoxin)
RPA3575	PWY-6891	thiazole biosynthesis II (Bacillus)
RPA3575	PWY-6892	thiazole biosynthesis I (E. coli)
RPA3576	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RPA3576	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RPA3576	PWY-6897	thiamin salvage II
RPA3576	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RPA3576	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RPA3576	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
RPA3576	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RPA3577	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
RPA3613	PWY-5350	thiosulfate disproportionation III (rhodanese)
RPA3628	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPA3634	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPA3634	PWY-3801	sucrose degradation II (sucrose synthase)
RPA3634	PWY-5054	sorbitol biosynthesis I
RPA3634	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
RPA3634	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RPA3634	PWY-5659	GDP-mannose biosynthesis
RPA3634	PWY-5723	Rubisco shunt
RPA3634	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPA3634	PWY-621	sucrose degradation III (sucrose invertase)
RPA3634	PWY-622	starch biosynthesis
RPA3634	PWY-6531	mannitol cycle
RPA3634	PWY-6981	chitin biosynthesis
RPA3634	PWY-7238	sucrose biosynthesis II
RPA3634	PWY-7347	sucrose biosynthesis III
RPA3634	PWY-7385	1,3-propanediol biosynthesis (engineered)
RPA3636	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RPA3637	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RPA3637	PWY-6855	chitin degradation I (archaea)
RPA3637	PWY-6906	chitin derivatives degradation
RPA3638	PWY-5530	sorbitol biosynthesis II
RPA3638	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPA3641	PWY-5941	glycogen degradation II (eukaryotic)
RPA3641	PWY-6724	starch degradation II
RPA3641	PWY-6737	starch degradation V
RPA3641	PWY-7238	sucrose biosynthesis II
RPA3643	PWY-2622	trehalose biosynthesis IV
RPA3644	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
RPA3644	PWY-622	starch biosynthesis
RPA3646	PWY-2661	trehalose biosynthesis V
RPA3647	PWY-2661	trehalose biosynthesis V
RPA3654	PWY-5964	guanylyl molybdenum cofactor biosynthesis
RPA3656	PWY-723	alkylnitronates degradation
RPA3660	PWY-5704	urea degradation II
RPA3662	PWY-5704	urea degradation II
RPA3663	PWY-5704	urea degradation II
RPA3685	PWY-5988	wound-induced proteolysis I
RPA3685	PWY-6018	seed germination protein turnover
RPA3694	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RPA3694	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
RPA3695	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
RPA3701	PWY-2201	folate transformations I
RPA3701	PWY-3841	folate transformations II
RPA3702	PWY-2201	folate transformations I
RPA3702	PWY-3841	folate transformations II
RPA3705	PWY-4261	glycerol degradation I
RPA3710	PWY-6683	sulfate reduction III (assimilatory)
RPA3717	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPA3717	PWY-5109	2-methylbutanoate biosynthesis
RPA3717	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RPA3717	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RPA3717	PWY-5177	glutaryl-CoA degradation
RPA3717	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPA3717	PWY-6435	4-hydroxybenzoate biosynthesis V
RPA3717	PWY-6583	pyruvate fermentation to butanol I
RPA3717	PWY-6863	pyruvate fermentation to hexanol
RPA3717	PWY-6883	pyruvate fermentation to butanol II
RPA3717	PWY-6944	androstenedione degradation
RPA3717	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RPA3717	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RPA3717	PWY-7007	methyl ketone biosynthesis
RPA3717	PWY-7046	4-coumarate degradation (anaerobic)
RPA3717	PWY-7094	fatty acid salvage
RPA3717	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RPA3717	PWY-735	jasmonic acid biosynthesis
RPA3717	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RPA3730	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
RPA3730	PWY-7494	choline degradation IV
RPA3734	PWY-7560	methylerythritol phosphate pathway II
RPA3740	PWY-6098	diploterol and cycloartenol biosynthesis
RPA3740	PWY-7072	hopanoid biosynthesis (bacteria)
RPA3813	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPA3815	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPA3815	PWY-5723	Rubisco shunt
RPA3817	PWY-6123	inosine-5'-phosphate biosynthesis I
RPA3817	PWY-6124	inosine-5'-phosphate biosynthesis II
RPA3817	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPA3817	PWY-7234	inosine-5'-phosphate biosynthesis III
RPA3818	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPA3818	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPA3818	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPA3820	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPA3820	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPA3820	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPA3821	PWY-6123	inosine-5'-phosphate biosynthesis I
RPA3821	PWY-6124	inosine-5'-phosphate biosynthesis II
RPA3821	PWY-7234	inosine-5'-phosphate biosynthesis III
RPA3834	PWY-5913	TCA cycle VI (obligate autotrophs)
RPA3834	PWY-6549	L-glutamine biosynthesis III
RPA3834	PWY-6728	methylaspartate cycle
RPA3834	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPA3834	PWY-7124	ethylene biosynthesis V (engineered)
RPA3834	PWY-7254	TCA cycle VII (acetate-producers)
RPA3834	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RPA3876	PWY-5392	reductive TCA cycle II
RPA3876	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPA3876	PWY-5690	TCA cycle II (plants and fungi)
RPA3876	PWY-5913	TCA cycle VI (obligate autotrophs)
RPA3876	PWY-6728	methylaspartate cycle
RPA3876	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPA3876	PWY-7254	TCA cycle VII (acetate-producers)
RPA3876	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPA3879	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RPA3925	PWY-3221	dTDP-L-rhamnose biosynthesis II
RPA3925	PWY-6808	dTDP-D-forosamine biosynthesis
RPA3925	PWY-6942	dTDP-D-desosamine biosynthesis
RPA3925	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RPA3925	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
RPA3925	PWY-6974	dTDP-L-olivose biosynthesis
RPA3925	PWY-6976	dTDP-L-mycarose biosynthesis
RPA3925	PWY-7104	dTDP-L-megosamine biosynthesis
RPA3925	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
RPA3925	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
RPA3925	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
RPA3925	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
RPA3925	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
RPA3925	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
RPA3925	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
RPA3925	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
RPA3951	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
RPA3951	PWY-5739	GDP-D-perosamine biosynthesis
RPA3951	PWY-5740	GDP-L-colitose biosynthesis
RPA3951	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
RPA3954	PWY-101	photosynthesis light reactions
RPA3954	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
RPA3959	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPA3971	PWY-6910	hydroxymethylpyrimidine salvage
RPA3971	PWY-7356	thiamin salvage IV (yeast)
RPA3971	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RPA3982	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RPA3982	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RPA3982	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RPA3987	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
RPA3990	PWY-3821	galactose degradation III
RPA3990	PWY-6317	galactose degradation I (Leloir pathway)
RPA3990	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RPA3990	PWY-6527	stachyose degradation
RPA3990	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
RPA3990	PWY-7344	UDP-D-galactose biosynthesis
RPA4015	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RPA4016	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RPA4016	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
RPA4018	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
RPA4024	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RPA4024	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RPA4024	PWY-6936	seleno-amino acid biosynthesis
RPA4024	PWY-702	L-methionine biosynthesis II
RPA4032	PWY-2201	folate transformations I
RPA4032	PWY-5497	purine nucleobases degradation II (anaerobic)
RPA4033	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPA4033	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPA4048	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
RPA4048	PWY-5940	streptomycin biosynthesis
RPA4049	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
RPA4052	PWY-6164	3-dehydroquinate biosynthesis I
RPA4071	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPA4071	PWY-5686	UMP biosynthesis
RPA4071	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPA4145	PWY-6523	nitrite-dependent anaerobic methane oxidation
RPA4145	PWY-6748	nitrate reduction VII (denitrification)
RPA4145	PWY-7084	nitrifier denitrification
RPA4147	PWY-7181	pyrimidine deoxyribonucleosides degradation
RPA4174	PWY-6123	inosine-5'-phosphate biosynthesis I
RPA4174	PWY-7234	inosine-5'-phosphate biosynthesis III
RPA4183	PWY-3781	aerobic respiration I (cytochrome c)
RPA4183	PWY-4521	arsenite oxidation I (respiratory)
RPA4183	PWY-6692	Fe(II) oxidation
RPA4183	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPA4193	PWY-1042	glycolysis IV (plant cytosol)
RPA4193	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RPA4193	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPA4193	PWY-5723	Rubisco shunt
RPA4193	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPA4193	PWY-6886	1-butanol autotrophic biosynthesis
RPA4193	PWY-6901	superpathway of glucose and xylose degradation
RPA4193	PWY-7003	glycerol degradation to butanol
RPA4193	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RPA4193	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPA4199	PWY-7425	2-chloroacrylate degradation I
RPA4209	PWY-381	nitrate reduction II (assimilatory)
RPA4209	PWY-5675	nitrate reduction V (assimilatory)
RPA4209	PWY-6549	L-glutamine biosynthesis III
RPA4209	PWY-6963	ammonia assimilation cycle I
RPA4209	PWY-6964	ammonia assimilation cycle II
RPA4213	PWY-6683	sulfate reduction III (assimilatory)
RPA4215	PWY-5194	siroheme biosynthesis
RPA4215	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RPA4216	PWY-6728	methylaspartate cycle
RPA4216	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPA4216	PWY-7118	chitin degradation to ethanol
RPA4216	PWY-7294	xylose degradation IV
RPA4216	PWY-7295	L-arabinose degradation IV
RPA4240	PWY-5392	reductive TCA cycle II
RPA4240	PWY-5537	pyruvate fermentation to acetate V
RPA4240	PWY-5538	pyruvate fermentation to acetate VI
RPA4240	PWY-5690	TCA cycle II (plants and fungi)
RPA4240	PWY-5913	TCA cycle VI (obligate autotrophs)
RPA4240	PWY-6728	methylaspartate cycle
RPA4240	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPA4240	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPA4251	PWY-5344	L-homocysteine biosynthesis
RPA4251	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RPA4270	PWY-702	L-methionine biosynthesis II
RPA4271	PWY-7560	methylerythritol phosphate pathway II
RPA4295	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPA4318	PWY-6749	CMP-legionaminate biosynthesis I
RPA4325	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPA4363	PWY-6167	flavin biosynthesis II (archaea)
RPA4363	PWY-6168	flavin biosynthesis III (fungi)
RPA4366	PWY-3341	L-proline biosynthesis III
RPA4366	PWY-4981	L-proline biosynthesis II (from arginine)
RPA4366	PWY-6344	L-ornithine degradation II (Stickland reaction)
RPA4370	PWY-5057	L-valine degradation II
RPA4370	PWY-5076	L-leucine degradation III
RPA4370	PWY-5078	L-isoleucine degradation II
RPA4370	PWY-5101	L-isoleucine biosynthesis II
RPA4370	PWY-5103	L-isoleucine biosynthesis III
RPA4370	PWY-5104	L-isoleucine biosynthesis IV
RPA4370	PWY-5108	L-isoleucine biosynthesis V
RPA4379	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
RPA4379	PWY-6167	flavin biosynthesis II (archaea)
RPA4379	PWY-6168	flavin biosynthesis III (fungi)
RPA4394	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPA4410	PWY-4261	glycerol degradation I
RPA4410	PWY-6118	glycerol-3-phosphate shuttle
RPA4410	PWY-6952	glycerophosphodiester degradation
RPA4419	PWY-4041	&gamma;-glutamyl cycle
RPA4419	PWY-5826	hypoglycin biosynthesis
RPA4437	PWY-5344	L-homocysteine biosynthesis
RPA4438	PWY-3461	L-tyrosine biosynthesis II
RPA4438	PWY-3462	L-phenylalanine biosynthesis II
RPA4438	PWY-6120	L-tyrosine biosynthesis III
RPA4438	PWY-6627	salinosporamide A biosynthesis
RPA4458	PWY-6825	phosphatidylcholine biosynthesis V
RPA4459	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
RPA4460	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
RPA4492	PWY-6605	adenine and adenosine salvage II
RPA4492	PWY-6610	adenine and adenosine salvage IV
RPA4498	PWY-5958	acridone alkaloid biosynthesis
RPA4498	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RPA4498	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RPA4533	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPA4533	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPA4562	PWY-6654	phosphopantothenate biosynthesis III
RPA4566	PWY-5482	pyruvate fermentation to acetate II
RPA4566	PWY-5485	pyruvate fermentation to acetate IV
RPA4566	PWY-5497	purine nucleobases degradation II (anaerobic)
RPA4567	PWY-1281	sulfoacetaldehyde degradation I
RPA4567	PWY-5482	pyruvate fermentation to acetate II
RPA4567	PWY-5485	pyruvate fermentation to acetate IV
RPA4567	PWY-5497	purine nucleobases degradation II (anaerobic)
RPA4567	PWY-6637	sulfolactate degradation II
RPA4568	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPA4568	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPA4568	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPA4568	PWY-6113	superpathway of mycolate biosynthesis
RPA4568	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPA4568	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPA4568	PWY-7096	triclosan resistance
RPA4568	PWYG-321	mycolate biosynthesis
RPA4582	PWY-3821	galactose degradation III
RPA4582	PWY-6317	galactose degradation I (Leloir pathway)
RPA4582	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RPA4582	PWY-6527	stachyose degradation
RPA4582	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
RPA4582	PWY-7344	UDP-D-galactose biosynthesis
RPA4591	PWY-5344	L-homocysteine biosynthesis
RPA4591	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RPA4592	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RPA4592	PWY-5143	long-chain fatty acid activation
RPA4592	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
RPA4592	PWY-5885	wax esters biosynthesis II
RPA4592	PWY-5972	stearate biosynthesis I (animals and fungi)
RPA4592	PWY-5995	linoleate biosynthesis I (plants)
RPA4592	PWY-6000	&gamma;-linolenate biosynthesis II (animals)
RPA4592	PWY-6001	linoleate biosynthesis II (animals)
RPA4592	PWY-6803	phosphatidylcholine acyl editing
RPA4592	PWY-6873	long chain fatty acid ester synthesis for microdiesel production
RPA4592	PWY-6920	6-gingerol analog biosynthesis
RPA4592	PWY-6951	RPA4592
RPA4592	PWY-7033	alkane biosynthesis II
RPA4592	PWY-7035	(<i>Z</i>)-9-tricosene biosynthesis
RPA4592	PWY-7049	icosapentaenoate biosynthesis II (metazoa)
RPA4592	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
RPA4592	PWY-7094	fatty acid salvage
RPA4592	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
RPA4600	PWY-5692	allantoin degradation to glyoxylate II
RPA4600	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
RPA4607	PWY-3081	L-lysine biosynthesis V
RPA4607	PWY-6871	3-methylbutanol biosynthesis
RPA4608	PWY-6823	molybdenum cofactor biosynthesis
RPA4608	PWY-6891	thiazole biosynthesis II (Bacillus)
RPA4608	PWY-6892	thiazole biosynthesis I (E. coli)
RPA4608	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RPA4630	PWY-6823	molybdenum cofactor biosynthesis
RPA4641	PWY-5532	adenosine nucleotides degradation IV
RPA4641	PWY-5723	Rubisco shunt
RPA4642	PWY-1042	glycolysis IV (plant cytosol)
RPA4642	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPA4642	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPA4642	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPA4642	PWY-7385	1,3-propanediol biosynthesis (engineered)
RPA4643	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPA4643	PWY-5723	Rubisco shunt
RPA4643	PWY-6891	thiazole biosynthesis II (Bacillus)
RPA4643	PWY-6892	thiazole biosynthesis I (E. coli)
RPA4643	PWY-6901	superpathway of glucose and xylose degradation
RPA4643	PWY-7560	methylerythritol phosphate pathway II
RPA4644	PWY-5723	Rubisco shunt
RPA4645	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPA4665	PWY-6871	3-methylbutanol biosynthesis
RPA4685	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPA4701	PWY-6216	3-chlorobenzoate degradation II (via protocatechuate)
RPA4701	PWY-6217	3,4-dichlorobenzoate degradation
RPA4708	PWY-723	alkylnitronates degradation
RPA4724	PWY-5686	UMP biosynthesis
RPA4727	PWY-5941	glycogen degradation II (eukaryotic)
RPA4727	PWY-622	starch biosynthesis
RPA4727	PWY-6731	starch degradation III
RPA4727	PWY-6737	starch degradation V
RPA4727	PWY-7238	sucrose biosynthesis II
RPA4729	PWY-31	canavanine degradation
RPA4729	PWY-4984	urea cycle
RPA4729	PWY-6305	putrescine biosynthesis IV
RPA4729	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RPA4741	PWY-2941	L-lysine biosynthesis II
RPA4741	PWY-2942	L-lysine biosynthesis III
RPA4741	PWY-5097	L-lysine biosynthesis VI
RPA4743	PWY-4983	L-citrulline-nitric oxide cycle
RPA4743	PWY-4984	urea cycle
RPA4743	PWY-5	canavanine biosynthesis
RPA4743	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPA4743	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPA4748	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPA4748	PWY-5109	2-methylbutanoate biosynthesis
RPA4748	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RPA4748	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RPA4748	PWY-5177	glutaryl-CoA degradation
RPA4748	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPA4748	PWY-6435	4-hydroxybenzoate biosynthesis V
RPA4748	PWY-6583	pyruvate fermentation to butanol I
RPA4748	PWY-6863	pyruvate fermentation to hexanol
RPA4748	PWY-6883	pyruvate fermentation to butanol II
RPA4748	PWY-6944	androstenedione degradation
RPA4748	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RPA4748	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RPA4748	PWY-7007	methyl ketone biosynthesis
RPA4748	PWY-7046	4-coumarate degradation (anaerobic)
RPA4748	PWY-7094	fatty acid salvage
RPA4748	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RPA4748	PWY-735	jasmonic acid biosynthesis
RPA4748	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RPA4751	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPA4751	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPA4751	PWY-6268	adenosylcobalamin salvage from cobalamin
RPA4751	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPA4765	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPA4772	PWY-4981	L-proline biosynthesis II (from arginine)
RPA4772	PWY-4984	urea cycle
RPA4772	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPA4787	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPA4820	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
RPA4820	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
