Rpdx1_0001	SSF48295	TrpR-like
Rpdx1_0001	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0002	SSF55979	DNA clamp
Rpdx1_0003	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0004	SSF54211	Ribosomal protein S5 domain 2-like
Rpdx1_0004	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_0004	SSF56719	Type II DNA topoisomerase
Rpdx1_0005	SSF103190	Sensory domain-like
Rpdx1_0005	SSF158472	HAMP domain-like
Rpdx1_0005	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_0006	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_0007	SSF52833	Thioredoxin-like
Rpdx1_0008	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0009	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_0010	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0010	SSF54909	Dimeric alpha+beta barrel
Rpdx1_0014	SSF55008	HMA, heavy metal-associated domain
Rpdx1_0014	SSF56784	HAD-like
Rpdx1_0014	SSF81653	Calcium ATPase, transduction domain A
Rpdx1_0014	SSF81665	Calcium ATPase, transmembrane domain M
Rpdx1_0016	SSF54862	4Fe-4S ferredoxins
Rpdx1_0017	SSF46626	Cytochrome c
Rpdx1_0019	SSF46626	Cytochrome c
Rpdx1_0020	SSF81442	Cytochrome c oxidase subunit I-like
Rpdx1_0021	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0022	SSF52833	Thioredoxin-like
Rpdx1_0023	SSF47616	GST C-terminal domain-like
Rpdx1_0023	SSF52833	Thioredoxin-like
Rpdx1_0024	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0025	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Rpdx1_0026	SSF103473	MFS general substrate transporter
Rpdx1_0027	SSF51569	Aldolase
Rpdx1_0029	SSF52335	Methylglyoxal synthase-like
Rpdx1_0029	SSF53927	Cytidine deaminase-like
Rpdx1_0031	SSF48013	NusB-like
Rpdx1_0031	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_0033	SSF50199	Staphylococcal nuclease
Rpdx1_0034	SSF54001	Cysteine proteinases
Rpdx1_0035	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_0035	SSF54373	FAD-linked reductases, C-terminal domain
Rpdx1_0036	SSF46955	Putative DNA-binding domain
Rpdx1_0036	SSF50249	Nucleic acid-binding proteins
Rpdx1_0036	SSF54991	Anticodon-binding domain of PheRS
Rpdx1_0036	SSF55681	Class II aaRS and biotin synthetases
Rpdx1_0036	SSF56037	PheT/TilS domain
Rpdx1_0037	SSF52980	Restriction endonuclease-like
Rpdx1_0038	SSF46589	tRNA-binding arm
Rpdx1_0038	SSF55681	Class II aaRS and biotin synthetases
Rpdx1_0039	SSF74731	Ribosomal protein L20
Rpdx1_0040	SSF143034	L35p-like
Rpdx1_0041	SSF54364	Translation initiation factor IF3, N-terminal domain
Rpdx1_0041	SSF55200	Translation initiation factor IF3, C-terminal domain
Rpdx1_0042	SSF53474	alpha/beta-Hydrolases
Rpdx1_0043	SSF46548	alpha-helical ferredoxin
Rpdx1_0043	SSF48371	ARM repeat
Rpdx1_0044	SSF47616	GST C-terminal domain-like
Rpdx1_0044	SSF52833	Thioredoxin-like
Rpdx1_0046	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0047	SSF53098	Ribonuclease H-like
Rpdx1_0051	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0053	SSF69754	Ribosome binding protein Y (YfiA homologue)
Rpdx1_0054	SSF55804	Phoshotransferase/anion transport protein
Rpdx1_0056	SSF49764	HSP20-like chaperones
Rpdx1_0057	SSF50331	MOP-like
Rpdx1_0057	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0058	SSF161098	MetI-like
Rpdx1_0059	SSF161098	MetI-like
Rpdx1_0060	SSF53850	Periplasmic binding protein-like II
Rpdx1_0061	SSF89796	CoA-transferase family III (CaiB/BaiF)
Rpdx1_0063	SSF55205	EPT/RTPC-like
Rpdx1_0064	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Rpdx1_0065	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0066	SSF50249	Nucleic acid-binding proteins
Rpdx1_0067	SSF52096	ClpP/crotonase
Rpdx1_0068	SSF47729	IHF-like DNA-binding proteins
Rpdx1_0070	SSF51366	Ribulose-phoshate binding barrel
Rpdx1_0071	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Rpdx1_0072	SSF51366	Ribulose-phoshate binding barrel
Rpdx1_0073	SSF52096	ClpP/crotonase
Rpdx1_0074	SSF53244	MurD-like peptide ligases, peptide-binding domain
Rpdx1_0074	SSF53623	MurD-like peptide ligases, catalytic domain
Rpdx1_0075	SSF52833	Thioredoxin-like
Rpdx1_0076	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0076	SSF52980	Restriction endonuclease-like
Rpdx1_0077	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0078	SSF53448	Nucleotide-diphospho-sugar transferases
Rpdx1_0079	SSF141371	PilZ domain-like
Rpdx1_0080	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0080	SSF56112	Protein kinase-like (PK-like)
Rpdx1_0081	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_0081	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_0081	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_0082	SSF51283	dUTPase-like
Rpdx1_0083	SSF102645	CoaB-like
Rpdx1_0083	SSF47598	Ribbon-helix-helix
Rpdx1_0083	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Rpdx1_0084	SSF56112	Protein kinase-like (PK-like)
Rpdx1_0085	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_0086	SSF46946	S13-like H2TH domain
Rpdx1_0086	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Rpdx1_0086	SSF81624	N-terminal domain of MutM-like DNA repair proteins
Rpdx1_0087	SSF47090	PGBD-like
Rpdx1_0087	SSF50494	Trypsin-like serine proteases
Rpdx1_0088	SSF69572	Activating enzymes of the ubiquitin-like proteins
Rpdx1_0089	SSF103473	MFS general substrate transporter
Rpdx1_0095	SSF46689	Homeodomain-like
Rpdx1_0095	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_0097	SSF111369	HlyD-like secretion proteins
Rpdx1_0098	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Rpdx1_0098	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Rpdx1_0098	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Rpdx1_0100	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0101	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0102	SSF161098	MetI-like
Rpdx1_0103	SSF161098	MetI-like
Rpdx1_0104	SSF53850	Periplasmic binding protein-like II
Rpdx1_0106	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0106	SSF90002	Hypothetical protein YjiA, C-terminal domain
Rpdx1_0107	SSF51338	Composite domain of metallo-dependent hydrolases
Rpdx1_0107	SSF51556	Metallo-dependent hydrolases
Rpdx1_0108	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0108	SSF53383	PLP-dependent transferases
Rpdx1_0110	SSF53720	ALDH-like
Rpdx1_0111	SSF54427	NTF2-like
Rpdx1_0112	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_0114	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_0115	SSF53448	Nucleotide-diphospho-sugar transferases
Rpdx1_0116	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_0116	SSF55781	GAF domain-like
Rpdx1_0116	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_0116	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_0117	SSF116726	TrkA C-terminal domain-like
Rpdx1_0117	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0117	SSF81324	Voltage-gated potassium channels
Rpdx1_0118	SSF56300	Metallo-dependent phosphatases
Rpdx1_0119	SSF56300	Metallo-dependent phosphatases
Rpdx1_0120	SSF53850	Periplasmic binding protein-like II
Rpdx1_0121	SSF161098	MetI-like
Rpdx1_0122	SSF161098	MetI-like
Rpdx1_0123	SSF50331	MOP-like
Rpdx1_0123	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0124	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0124	SSF53850	Periplasmic binding protein-like II
Rpdx1_0125	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0126	SSF161098	MetI-like
Rpdx1_0127	SSF53850	Periplasmic binding protein-like II
Rpdx1_0128	SSF53920	Fe-only hydrogenase
Rpdx1_0128	SSF54292	2Fe-2S ferredoxin-like
Rpdx1_0128	SSF54862	4Fe-4S ferredoxins
Rpdx1_0129	SSF140490	Nqo1C-terminal domain-like
Rpdx1_0129	SSF46548	alpha-helical ferredoxin
Rpdx1_0129	SSF51971	Nucleotide-binding domain
Rpdx1_0130	SSF103190	Sensory domain-like
Rpdx1_0130	SSF158472	HAMP domain-like
Rpdx1_0130	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_0130	SSF52172	CheY-like
Rpdx1_0130	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_0130	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_0131	SSF143800	L28p-like
Rpdx1_0133	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0134	SSF55174	Alpha-L RNA-binding motif
Rpdx1_0135	SSF54862	4Fe-4S ferredoxins
Rpdx1_0136	SSF141259	CarD-like
Rpdx1_0138	SSF50199	Staphylococcal nuclease
Rpdx1_0139	SSF53822	Periplasmic binding protein-like I
Rpdx1_0140	SSF52096	ClpP/crotonase
Rpdx1_0141	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Rpdx1_0142	SSF52096	ClpP/crotonase
Rpdx1_0143	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_0144	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_0144	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_0145	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0147	SSF140804	YidB-like
Rpdx1_0148	SSF53300	vWA-like
Rpdx1_0149	SSF50129	GroES-like
Rpdx1_0149	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0150	SSF56059	Glutathione synthetase ATP-binding domain-like
Rpdx1_0151	SSF51395	FMN-linked oxidoreductases
Rpdx1_0152	SSF102215	Creatininase
Rpdx1_0153	SSF53850	Periplasmic binding protein-like II
Rpdx1_0154	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0155	SSF161098	MetI-like
Rpdx1_0156	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0156	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Rpdx1_0157	SSF50882	beta-Barrel protease inhibitors
Rpdx1_0158	SSF160935	VPA0735-like
Rpdx1_0159	SSF53720	ALDH-like
Rpdx1_0161	SSF56601	beta-lactamase/transpeptidase-like
Rpdx1_0162	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_0163	SSF53613	Ribokinase-like
Rpdx1_0165	SSF52374	Nucleotidylyl transferase
Rpdx1_0166	SSF52402	Adenine nucleotide alpha hydrolases-like
Rpdx1_0167	SSF110836	Hypothetical protein SAV1430
Rpdx1_0167	SSF117916	Fe-S cluster assembly (FSCA) domain-like
Rpdx1_0168	SSF53067	Actin-like ATPase domain
Rpdx1_0169	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_0170	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0171	SSF56784	HAD-like
Rpdx1_0172	SSF102114	Radical SAM enzymes
Rpdx1_0173	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0173	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
Rpdx1_0174	SSF55486	Metalloproteases ("zincins"), catalytic domain
Rpdx1_0175	SSF54631	CBS-domain pair
Rpdx1_0175	SSF56176	FAD-binding/transporter-associated domain-like
Rpdx1_0176	SSF56317	Carbon-nitrogen hydrolase
Rpdx1_0177	SSF47413	lambda repressor-like DNA-binding domains
Rpdx1_0178	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_0179	SSF51197	Clavaminate synthase-like
Rpdx1_0181	SSF74942	YhbC-like, C-terminal domain
Rpdx1_0181	SSF75420	YhbC-like, N-terminal domain
Rpdx1_0182	SSF47794	Rad51 N-terminal domain-like
Rpdx1_0182	SSF50249	Nucleic acid-binding proteins
Rpdx1_0182	SSF54814	Prokaryotic type KH domain (KH-domain type II)
Rpdx1_0182	SSF69705	Transcription factor NusA, N-terminal domain
Rpdx1_0183	SSF55315	L30e-like
Rpdx1_0183	SSF64376	YlxR-like
Rpdx1_0184	SSF50447	Translation proteins
Rpdx1_0184	SSF52156	Initiation factor IF2/eIF5b, domain 3
Rpdx1_0184	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0185	SSF89919	Ribosome-binding factor A, RbfA
Rpdx1_0186	SSF55120	Pseudouridine synthase
Rpdx1_0187	SSF47060	S15/NS1 RNA-binding domain
Rpdx1_0188	SSF46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
Rpdx1_0188	SSF50249	Nucleic acid-binding proteins
Rpdx1_0188	SSF54211	Ribosomal protein S5 domain 2-like
Rpdx1_0188	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
Rpdx1_0188	SSF55666	Ribonuclease PH domain 2-like
Rpdx1_0189	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
Rpdx1_0189	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
Rpdx1_0190	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_0190	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_0191	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0191	SSF53850	Periplasmic binding protein-like II
Rpdx1_0192	SSF48113	Heme-dependent peroxidases
Rpdx1_0194	SSF55144	LigT-like
Rpdx1_0195	SSF56601	beta-lactamase/transpeptidase-like
Rpdx1_0197	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Rpdx1_0197	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Rpdx1_0198	SSF55120	Pseudouridine synthase
Rpdx1_0198	SSF55174	Alpha-L RNA-binding motif
Rpdx1_0200	SSF56349	DNA breaking-rejoining enzymes
Rpdx1_0201	SSF47413	lambda repressor-like DNA-binding domains
Rpdx1_0204	SSF46689	Homeodomain-like
Rpdx1_0204	SSF53041	Resolvase-like
Rpdx1_0207	SSF141868	EAL domain-like
Rpdx1_0207	SSF55073	Nucleotide cyclase
Rpdx1_0207	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_0208	SSF53383	PLP-dependent transferases
Rpdx1_0209	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0209	SSF54909	Dimeric alpha+beta barrel
Rpdx1_0210	SSF52833	Thioredoxin-like
Rpdx1_0211	SSF50129	GroES-like
Rpdx1_0211	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0212	SSF140376	ChaB-like
Rpdx1_0213	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_0214	SSF52402	Adenine nucleotide alpha hydrolases-like
Rpdx1_0215	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0215	SSF56327	LDH C-terminal domain-like
Rpdx1_0216	SSF53613	Ribokinase-like
Rpdx1_0217	SSF50692	ADC-like
Rpdx1_0217	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Rpdx1_0218	SSF51161	Trimeric LpxA-like enzymes
Rpdx1_0218	SSF53448	Nucleotide-diphospho-sugar transferases
Rpdx1_0219	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_0220	SSF52096	ClpP/crotonase
Rpdx1_0221	SSF102712	JAB1/MPN domain
Rpdx1_0221	SSF47781	RuvA domain 2-like
Rpdx1_0223	SSF100939	SPOC domain-like
Rpdx1_0224	SSF55920	Creatinase/aminopeptidase
Rpdx1_0225	SSF56176	FAD-binding/transporter-associated domain-like
Rpdx1_0226	SSF55166	Hedgehog/DD-peptidase
Rpdx1_0227	SSF141868	EAL domain-like
Rpdx1_0227	SSF55073	Nucleotide cyclase
Rpdx1_0227	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_0228	SSF53649	Alkaline phosphatase-like
Rpdx1_0231	SSF52402	Adenine nucleotide alpha hydrolases-like
Rpdx1_0231	SSF69864	Argininosuccinate synthetase, C-terminal domain
Rpdx1_0232	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
Rpdx1_0234	SSF109604	HD-domain/PDEase-like
Rpdx1_0235	SSF102114	Radical SAM enzymes
Rpdx1_0237	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0238	SSF50129	GroES-like
Rpdx1_0238	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0239	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_0240	SSF46689	Homeodomain-like
Rpdx1_0240	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_0242	SSF55248	PCD-like
Rpdx1_0243	SSF53850	Periplasmic binding protein-like II
Rpdx1_0245	SSF56935	Porins
Rpdx1_0246	SSF50447	Translation proteins
Rpdx1_0246	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0246	SSF54980	EF-G C-terminal domain-like
Rpdx1_0247	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_0247	SSF54373	FAD-linked reductases, C-terminal domain
Rpdx1_0248	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_0249	SSF50324	Inorganic pyrophosphatase
Rpdx1_0250	SSF53187	Zn-dependent exopeptidases
Rpdx1_0250	SSF55031	Bacterial exopeptidase dimerisation domain
Rpdx1_0251	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0251	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Rpdx1_0252	SSF69786	YggU-like
Rpdx1_0254	SSF52096	ClpP/crotonase
Rpdx1_0255	SSF54427	NTF2-like
Rpdx1_0256	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0257	SSF158682	TerB-like
Rpdx1_0258	SSF48264	Cytochrome P450
Rpdx1_0259	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0259	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Rpdx1_0261	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0262	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_0263	SSF53901	Thiolase-like
Rpdx1_0264	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0266	SSF53795	PEP carboxykinase-like
Rpdx1_0266	SSF68923	PEP carboxykinase N-terminal domain
Rpdx1_0267	SSF50475	FMN-binding split barrel
Rpdx1_0268	SSF52172	CheY-like
Rpdx1_0269	SSF158472	HAMP domain-like
Rpdx1_0269	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_0269	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_0270	SSF53795	PEP carboxykinase-like
Rpdx1_0271	SSF53062	PTS system fructose IIA component-like
Rpdx1_0272	SSF55594	HPr-like
Rpdx1_0274	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0274	SSF54980	EF-G C-terminal domain-like
Rpdx1_0276	SSF52980	Restriction endonuclease-like
Rpdx1_0277	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_0278	SSF53474	alpha/beta-Hydrolases
Rpdx1_0282	SSF53474	alpha/beta-Hydrolases
Rpdx1_0283	SSF53474	alpha/beta-Hydrolases
Rpdx1_0284	SSF48150	DNA-glycosylase
Rpdx1_0286	SSF46689	Homeodomain-like
Rpdx1_0286	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
Rpdx1_0286	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
Rpdx1_0287	SSF53649	Alkaline phosphatase-like
Rpdx1_0287	SSF64158	2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
Rpdx1_0288	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0288	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Rpdx1_0289	SSF54909	Dimeric alpha+beta barrel
Rpdx1_0290	SSF51366	Ribulose-phoshate binding barrel
Rpdx1_0291	SSF52218	Flavoproteins
Rpdx1_0292	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_0293	SSF46565	Chaperone J-domain
Rpdx1_0293	SSF49493	HSP40/DnaJ peptide-binding domain
Rpdx1_0293	SSF57938	DnaJ/Hsp40 cysteine-rich domain
Rpdx1_0294	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
Rpdx1_0294	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
Rpdx1_0294	SSF53067	Actin-like ATPase domain
Rpdx1_0296	SSF51064	Head domain of nucleotide exchange factor GrpE
Rpdx1_0296	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
Rpdx1_0297	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0297	SSF55781	GAF domain-like
Rpdx1_0298	SSF54211	Ribosomal protein S5 domain 2-like
Rpdx1_0298	SSF55666	Ribonuclease PH domain 2-like
Rpdx1_0299	SSF52972	ITPase-like
Rpdx1_0300	SSF102114	Radical SAM enzymes
Rpdx1_0301	SSF53822	Periplasmic binding protein-like I
Rpdx1_0302	SSF53790	Tetrapyrrole methylase
Rpdx1_0303	SSF52980	Restriction endonuclease-like
Rpdx1_0304	SSF52440	PreATP-grasp domain
Rpdx1_0304	SSF56059	Glutathione synthetase ATP-binding domain-like
Rpdx1_0305	SSF46894	C-terminal effector domain of the bipartite response regulators
Rpdx1_0305	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
Rpdx1_0306	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_0308	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0308	SSF54211	Ribosomal protein S5 domain 2-like
Rpdx1_0309	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_0309	SSF52172	CheY-like
Rpdx1_0309	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_0310	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_0311	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0312	SSF101386	all-alpha NTP pyrophosphatases
Rpdx1_0313	SSF51366	Ribulose-phoshate binding barrel
Rpdx1_0314	SSF51366	Ribulose-phoshate binding barrel
Rpdx1_0316	SSF52317	Class I glutamine amidotransferase-like
Rpdx1_0318	SSF54211	Ribosomal protein S5 domain 2-like
Rpdx1_0319	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Rpdx1_0320	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0321	SSF160443	SMR domain-like
Rpdx1_0322	SSF50685	Barwin-like endoglucanases
Rpdx1_0323	SSF54427	NTF2-like
Rpdx1_0324	SSF54611	SecB-like
Rpdx1_0325	SSF53098	Ribonuclease H-like
Rpdx1_0326	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0327	SSF52972	ITPase-like
Rpdx1_0330	SSF50249	Nucleic acid-binding proteins
Rpdx1_0330	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0330	SSF68912	Rho N-terminal domain-like
Rpdx1_0331	SSF116878	TrmE connector domain
Rpdx1_0331	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0332	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_0333	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_0334	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0335	SSF110849	ParB/Sulfiredoxin
Rpdx1_0337	SSF48019	post-AAA+ oligomerization domain-like
Rpdx1_0337	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0339	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Rpdx1_0339	SSF50677	ValRS/IleRS/LeuRS editing domain
Rpdx1_0339	SSF52374	Nucleotidylyl transferase
Rpdx1_0340	SSF103190	Sensory domain-like
Rpdx1_0340	SSF158472	HAMP domain-like
Rpdx1_0340	SSF55073	Nucleotide cyclase
Rpdx1_0341	SSF51419	PLP-binding barrel
Rpdx1_0342	SSF141523	L,D-transpeptidase catalytic domain-like
Rpdx1_0343	SSF46894	C-terminal effector domain of the bipartite response regulators
Rpdx1_0343	SSF52172	CheY-like
Rpdx1_0344	SSF51206	cAMP-binding domain-like
Rpdx1_0345	SSF56219	DNase I-like
Rpdx1_0346	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_0347	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
Rpdx1_0348	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0348	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0349	SSF53383	PLP-dependent transferases
Rpdx1_0351	SSF81301	Nucleotidyltransferase
Rpdx1_0353	SSF111352	Ammonium transporter
Rpdx1_0354	SSF54913	GlnB-like
Rpdx1_0355	SSF54913	GlnB-like
Rpdx1_0356	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_0357	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_0358	SSF158997	Trm112p-like
Rpdx1_0359	SSF88697	PUA domain-like
Rpdx1_0360	SSF48452	TPR-like
Rpdx1_0360	SSF52833	Thioredoxin-like
Rpdx1_0363	SSF161098	MetI-like
Rpdx1_0364	SSF53850	Periplasmic binding protein-like II
Rpdx1_0365	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0366	SSF52821	Rhodanese/Cell cycle control phosphatase
Rpdx1_0367	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_0367	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_0368	SSF82784	OsmC-like
Rpdx1_0369	SSF46689	Homeodomain-like
Rpdx1_0369	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_0371	SSF111038	YjbQ-like
Rpdx1_0372	SSF51649	RuBisCo, C-terminal domain
Rpdx1_0372	SSF54966	RuBisCO, large subunit, small (N-terminal) domain
Rpdx1_0375	SSF158472	HAMP domain-like
Rpdx1_0376	SSF48452	TPR-like
Rpdx1_0378	SSF69618	HemD-like
Rpdx1_0379	SSF53067	Actin-like ATPase domain
Rpdx1_0380	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Rpdx1_0380	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0381	SSF88697	PUA domain-like
Rpdx1_0382	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_0383	SSF102114	Radical SAM enzymes
Rpdx1_0384	SSF54506	Diaminopimelate epimerase-like
Rpdx1_0385	SSF55136	Probable bacterial effector-binding domain
Rpdx1_0387	SSF56281	Metallo-hydrolase/oxidoreductase
Rpdx1_0388	SSF88723	PIN domain-like
Rpdx1_0389	SSF143120	YefM-like
Rpdx1_0390	SSF47446	Signal peptide-binding domain
Rpdx1_0390	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0391	SSF54565	Ribosomal protein S16
Rpdx1_0392	SSF50346	PRC-barrel domain
Rpdx1_0392	SSF50447	Translation proteins
Rpdx1_0393	SSF75217	alpha/beta knot
Rpdx1_0394	SSF50104	Translation proteins SH3-like domain
Rpdx1_0395	SSF53732	Aconitase iron-sulfur domain
Rpdx1_0399	SSF55486	Metalloproteases ("zincins"), catalytic domain
Rpdx1_0400	SSF52016	LeuD/IlvD-like
Rpdx1_0401	SSF158472	HAMP domain-like
Rpdx1_0401	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_0402	SSF51621	Phosphoenolpyruvate/pyruvate domain
Rpdx1_0403	SSF53056	beta-carbonic anhydrase, cab
Rpdx1_0405	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0405	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Rpdx1_0409	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Rpdx1_0411	SSF103473	MFS general substrate transporter
Rpdx1_0412	SSF56524	Oxidoreductase molybdopterin-binding domain
Rpdx1_0413	SSF81342	Transmembrane di-heme cytochromes
Rpdx1_0414	SSF82153	FAS1 domain
Rpdx1_0415	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_0416	SSF160240	Cation efflux protein cytoplasmic domain-like
Rpdx1_0416	SSF161111	Cation efflux protein transmembrane domain-like
Rpdx1_0417	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
Rpdx1_0418	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
Rpdx1_0419	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
Rpdx1_0419	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_0419	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Rpdx1_0420	SSF46548	alpha-helical ferredoxin
Rpdx1_0420	SSF54292	2Fe-2S ferredoxin-like
Rpdx1_0421	SSF50475	FMN-binding split barrel
Rpdx1_0424	SSF103088	OmpA-like
Rpdx1_0425	SSF141523	L,D-transpeptidase catalytic domain-like
Rpdx1_0426	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_0427	SSF55120	Pseudouridine synthase
Rpdx1_0428	SSF47364	Domain of the SRP/SRP receptor G-proteins
Rpdx1_0428	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0430	SSF81585	PsbU/PolX domain-like
Rpdx1_0431	SSF52833	Thioredoxin-like
Rpdx1_0435	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0436	SSF52016	LeuD/IlvD-like
Rpdx1_0436	SSF53732	Aconitase iron-sulfur domain
Rpdx1_0437	SSF52833	Thioredoxin-like
Rpdx1_0439	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_0442	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0443	SSF52266	SGNH hydrolase
Rpdx1_0444	SSF55144	LigT-like
Rpdx1_0445	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0446	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0446	SSF56327	LDH C-terminal domain-like
Rpdx1_0447	SSF52210	Succinyl-CoA synthetase domains
Rpdx1_0447	SSF56059	Glutathione synthetase ATP-binding domain-like
Rpdx1_0448	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0448	SSF52210	Succinyl-CoA synthetase domains
Rpdx1_0449	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Rpdx1_0450	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
Rpdx1_0450	SSF51230	Single hybrid motif
Rpdx1_0450	SSF52777	CoA-dependent acyltransferases
Rpdx1_0451	SSF161084	MAPEG domain-like
Rpdx1_0452	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0453	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_0453	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Rpdx1_0457	SSF47823	lambda integrase-like, N-terminal domain
Rpdx1_0457	SSF56349	DNA breaking-rejoining enzymes
Rpdx1_0458	SSF161219	CHY zinc finger-like
Rpdx1_0458	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0459	SSF50685	Barwin-like endoglucanases
Rpdx1_0460	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
Rpdx1_0461	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
Rpdx1_0461	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
Rpdx1_0461	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0462	SSF52943	ATP synthase (F1-ATPase), gamma subunit
Rpdx1_0463	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
Rpdx1_0463	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
Rpdx1_0463	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0464	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
Rpdx1_0465	SSF55811	Nudix
Rpdx1_0466	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0468	SSF55811	Nudix
Rpdx1_0469	SSF88713	Glycoside hydrolase/deacetylase
Rpdx1_0470	SSF50156	PDZ domain-like
Rpdx1_0470	SSF52096	ClpP/crotonase
Rpdx1_0471	SSF51261	Duplicated hybrid motif
Rpdx1_0472	SSF75217	alpha/beta knot
Rpdx1_0473	SSF81301	Nucleotidyltransferase
Rpdx1_0474	SSF52374	Nucleotidylyl transferase
Rpdx1_0475	SSF53720	ALDH-like
Rpdx1_0476	SSF47598	Ribbon-helix-helix
Rpdx1_0478	SSF53633	Carbamate kinase-like
Rpdx1_0478	SSF88697	PUA domain-like
Rpdx1_0479	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0479	SSF82051	Obg GTP-binding protein N-terminal domain
Rpdx1_0480	SSF103481	Multidrug resistance efflux transporter EmrE
Rpdx1_0483	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_0484	SSF110324	Ribosomal L27 protein-like
Rpdx1_0485	SSF141091	L21p-like
Rpdx1_0486	SSF53067	Actin-like ATPase domain
Rpdx1_0488	SSF47413	lambda repressor-like DNA-binding domains
Rpdx1_0489	SSF56770	HydA/Nqo6-like
Rpdx1_0490	SSF56762	HydB/Nqo4-like
Rpdx1_0491	SSF56770	HydA/Nqo6-like
Rpdx1_0492	SSF56762	HydB/Nqo4-like
Rpdx1_0493	SSF81342	Transmembrane di-heme cytochromes
Rpdx1_0494	SSF53163	HybD-like
Rpdx1_0496	SSF159127	HupF/HypC-like
Rpdx1_0497	SSF52833	Thioredoxin-like
Rpdx1_0499	SSF57802	Rubredoxin-like
Rpdx1_0501	SSF56762	HydB/Nqo4-like
Rpdx1_0503	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0504	SSF54975	Acylphosphatase/BLUF domain-like
Rpdx1_0504	SSF55821	YrdC/RibB
Rpdx1_0505	SSF159127	HupF/HypC-like
Rpdx1_0507	SSF55326	PurM N-terminal domain-like
Rpdx1_0507	SSF56042	PurM C-terminal domain-like
Rpdx1_0508	SSF46689	Homeodomain-like
Rpdx1_0508	SSF52172	CheY-like
Rpdx1_0508	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0509	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_0509	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_0509	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_0510	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_0511	SSF52172	CheY-like
Rpdx1_0511	SSF52738	Methylesterase CheB, C-terminal domain
Rpdx1_0512	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
Rpdx1_0512	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_0513	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_0514	SSF50341	CheW-like
Rpdx1_0515	SSF50341	CheW-like
Rpdx1_0516	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Rpdx1_0516	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_0516	SSF50341	CheW-like
Rpdx1_0516	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_0517	SSF52172	CheY-like
Rpdx1_0518	SSF52091	SpoIIaa-like
Rpdx1_0519	SSF109604	HD-domain/PDEase-like
Rpdx1_0519	SSF52172	CheY-like
Rpdx1_0521	SSF81442	Cytochrome c oxidase subunit I-like
Rpdx1_0521	SSF81452	Cytochrome c oxidase subunit III-like
Rpdx1_0522	SSF49503	Cupredoxins
Rpdx1_0526	SSF50956	Thermostable phytase (3-phytase)
Rpdx1_0527	SSF53300	vWA-like
Rpdx1_0529	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0531	SSF46565	Chaperone J-domain
Rpdx1_0532	SSF82657	BolA-like
Rpdx1_0533	SSF54631	CBS-domain pair
Rpdx1_0533	SSF56176	FAD-binding/transporter-associated domain-like
Rpdx1_0534	SSF56796	Dehydroquinate synthase-like
Rpdx1_0535	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0537	SSF56349	DNA breaking-rejoining enzymes
Rpdx1_0538	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0539	SSF52096	ClpP/crotonase
Rpdx1_0540	SSF141523	L,D-transpeptidase catalytic domain-like
Rpdx1_0541	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0541	SSF81767	Pre-protein crosslinking domain of SecA
Rpdx1_0541	SSF81886	Helical scaffold and wing domains of SecA
Rpdx1_0542	SSF109998	Triger factor/SurA peptide-binding domain-like
Rpdx1_0542	SSF54534	FKBP-like
Rpdx1_0543	SSF48334	DNA repair protein MutS, domain III
Rpdx1_0543	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0543	SSF53150	DNA repair protein MutS, domain II
Rpdx1_0543	SSF55271	DNA repair protein MutS, domain I
Rpdx1_0544	SSF53901	Thiolase-like
Rpdx1_0545	SSF103473	MFS general substrate transporter
Rpdx1_0546	SSF111369	HlyD-like secretion proteins
Rpdx1_0547	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0548	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0549	SSF103481	Multidrug resistance efflux transporter EmrE
Rpdx1_0552	SSF141868	EAL domain-like
Rpdx1_0552	SSF55073	Nucleotide cyclase
Rpdx1_0553	SSF54975	Acylphosphatase/BLUF domain-like
Rpdx1_0554	SSF48576	Terpenoid synthases
Rpdx1_0555	SSF53955	Lysozyme-like
Rpdx1_0556	SSF57829	Zn-binding ribosomal proteins
Rpdx1_0559	SSF141868	EAL domain-like
Rpdx1_0561	SSF53901	Thiolase-like
Rpdx1_0562	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0563	SSF103481	Multidrug resistance efflux transporter EmrE
Rpdx1_0564	SSF50630	Acid proteases
Rpdx1_0565	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0568	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0569	SSF47598	Ribbon-helix-helix
Rpdx1_0570	SSF103473	MFS general substrate transporter
Rpdx1_0571	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0574	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0577	SSF54427	NTF2-like
Rpdx1_0581	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0581	SSF53850	Periplasmic binding protein-like II
Rpdx1_0582	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_0583	SSF46894	C-terminal effector domain of the bipartite response regulators
Rpdx1_0583	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
Rpdx1_0584	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_0584	SSF54373	FAD-linked reductases, C-terminal domain
Rpdx1_0586	SSF89796	CoA-transferase family III (CaiB/BaiF)
Rpdx1_0588	SSF53850	Periplasmic binding protein-like II
Rpdx1_0589	SSF161098	MetI-like
Rpdx1_0590	SSF161098	MetI-like
Rpdx1_0591	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0591	SSF48008	GntR ligand-binding domain-like
Rpdx1_0592	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_0592	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Rpdx1_0593	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_0594	SSF53720	ALDH-like
Rpdx1_0595	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Rpdx1_0596	SSF55103	FAD-linked oxidases, C-terminal domain
Rpdx1_0596	SSF56176	FAD-binding/transporter-associated domain-like
Rpdx1_0597	SSF55103	FAD-linked oxidases, C-terminal domain
Rpdx1_0597	SSF56176	FAD-binding/transporter-associated domain-like
Rpdx1_0598	SSF54862	4Fe-4S ferredoxins
Rpdx1_0599	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0600	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0601	SSF53850	Periplasmic binding protein-like II
Rpdx1_0602	SSF161098	MetI-like
Rpdx1_0603	SSF161098	MetI-like
Rpdx1_0604	SSF55103	FAD-linked oxidases, C-terminal domain
Rpdx1_0604	SSF56176	FAD-binding/transporter-associated domain-like
Rpdx1_0605	SSF47616	GST C-terminal domain-like
Rpdx1_0605	SSF52833	Thioredoxin-like
Rpdx1_0606	SSF50022	ISP domain
Rpdx1_0607	SSF50022	ISP domain
Rpdx1_0607	SSF55961	Bet v1-like
Rpdx1_0608	SSF54427	NTF2-like
Rpdx1_0609	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_0609	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Rpdx1_0612	SSF52151	FabD/lysophospholipase-like
Rpdx1_0614	SSF47413	lambda repressor-like DNA-binding domains
Rpdx1_0616	SSF56349	DNA breaking-rejoining enzymes
Rpdx1_0617	SSF158442	DsbB-like
Rpdx1_0618	SSF55781	GAF domain-like
Rpdx1_0618	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_0619	SSF52172	CheY-like
Rpdx1_0620	SSF50346	PRC-barrel domain
Rpdx1_0626	SSF53474	alpha/beta-Hydrolases
Rpdx1_0628	SSF51182	RmlC-like cupins
Rpdx1_0629	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Rpdx1_0629	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Rpdx1_0631	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_0632	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0632	SSF53850	Periplasmic binding protein-like II
Rpdx1_0633	SSF118215	Proton glutamate symport protein
Rpdx1_0634	SSF51182	RmlC-like cupins
Rpdx1_0635	SSF51182	RmlC-like cupins
Rpdx1_0636	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_0638	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Rpdx1_0639	SSF56104	SAICAR synthase-like
Rpdx1_0640	SSF51182	RmlC-like cupins
Rpdx1_0642	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_0643	SSF103378	2-methylcitrate dehydratase PrpD
Rpdx1_0646	SSF53474	alpha/beta-Hydrolases
Rpdx1_0648	SSF46689	Homeodomain-like
Rpdx1_0649	SSF56281	Metallo-hydrolase/oxidoreductase
Rpdx1_0650	SSF53300	vWA-like
Rpdx1_0652	SSF52172	CheY-like
Rpdx1_0653	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_0653	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_0654	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0656	SSF53474	alpha/beta-Hydrolases
Rpdx1_0658	SSF53955	Lysozyme-like
Rpdx1_0658	SSF56601	beta-lactamase/transpeptidase-like
Rpdx1_0661	SSF53822	Periplasmic binding protein-like I
Rpdx1_0663	SSF54909	Dimeric alpha+beta barrel
Rpdx1_0664	SSF103190	Sensory domain-like
Rpdx1_0664	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_0664	SSF52172	CheY-like
Rpdx1_0664	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_0664	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_0665	SSF158832	Tex N-terminal region-like
Rpdx1_0665	SSF47781	RuvA domain 2-like
Rpdx1_0665	SSF50249	Nucleic acid-binding proteins
Rpdx1_0665	SSF53098	Ribonuclease H-like
Rpdx1_0668	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0669	SSF46689	Homeodomain-like
Rpdx1_0670	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_0670	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_0671	SSF50156	PDZ domain-like
Rpdx1_0671	SSF52096	ClpP/crotonase
Rpdx1_0672	SSF55021	ACT-like
Rpdx1_0672	SSF81301	Nucleotidyltransferase
Rpdx1_0672	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
Rpdx1_0672	SSF81891	Poly A polymerase C-terminal region-like
Rpdx1_0673	SSF56266	DmpA/ArgJ-like
Rpdx1_0674	SSF55811	Nudix
Rpdx1_0675	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_0677	SSF53271	PRTase-like
Rpdx1_0678	SSF52833	Thioredoxin-like
Rpdx1_0679	SSF56317	Carbon-nitrogen hydrolase
Rpdx1_0681	SSF103481	Multidrug resistance efflux transporter EmrE
Rpdx1_0682	SSF103481	Multidrug resistance efflux transporter EmrE
Rpdx1_0683	SSF56281	Metallo-hydrolase/oxidoreductase
Rpdx1_0684	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_0685	SSF53633	Carbamate kinase-like
Rpdx1_0685	SSF55021	ACT-like
Rpdx1_0686	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
Rpdx1_0686	SSF51621	Phosphoenolpyruvate/pyruvate domain
Rpdx1_0686	SSF52009	Phosphohistidine domain
Rpdx1_0686	SSF55781	GAF domain-like
Rpdx1_0687	SSF75620	Release factor
Rpdx1_0688	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_0690	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_0691	SSF56281	Metallo-hydrolase/oxidoreductase
Rpdx1_0692	SSF51182	RmlC-like cupins
Rpdx1_0693	SSF53613	Ribokinase-like
Rpdx1_0694	SSF55811	Nudix
Rpdx1_0695	SSF54197	HIT-like
Rpdx1_0696	SSF48019	post-AAA+ oligomerization domain-like
Rpdx1_0696	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0697	SSF82607	YbaB-like
Rpdx1_0698	SSF111304	Recombination protein RecR
Rpdx1_0700	SSF103473	MFS general substrate transporter
Rpdx1_0702	SSF56420	Peptide deformylase
Rpdx1_0703	SSF50486	FMT C-terminal domain-like
Rpdx1_0703	SSF53328	Formyltransferase
Rpdx1_0704	SSF55120	Pseudouridine synthase
Rpdx1_0705	SSF53187	Zn-dependent exopeptidases
Rpdx1_0705	SSF55031	Bacterial exopeptidase dimerisation domain
Rpdx1_0706	SSF51161	Trimeric LpxA-like enzymes
Rpdx1_0707	SSF56784	HAD-like
Rpdx1_0708	SSF47090	PGBD-like
Rpdx1_0709	SSF53633	Carbamate kinase-like
Rpdx1_0711	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0713	SSF54211	Ribosomal protein S5 domain 2-like
Rpdx1_0715	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_0716	SSF141571	Pentapeptide repeat-like
Rpdx1_0720	SSF52317	Class I glutamine amidotransferase-like
Rpdx1_0721	SSF53474	alpha/beta-Hydrolases
Rpdx1_0723	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0723	SSF53383	PLP-dependent transferases
Rpdx1_0724	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0724	SSF53850	Periplasmic binding protein-like II
Rpdx1_0725	SSF51182	RmlC-like cupins
Rpdx1_0726	SSF54909	Dimeric alpha+beta barrel
Rpdx1_0727	SSF54427	NTF2-like
Rpdx1_0728	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_0729	SSF46548	alpha-helical ferredoxin
Rpdx1_0729	SSF47240	Ferritin-like
Rpdx1_0729	SSF51971	Nucleotide-binding domain
Rpdx1_0729	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Rpdx1_0729	SSF63380	Riboflavin synthase domain-like
Rpdx1_0730	SSF102114	Radical SAM enzymes
Rpdx1_0731	SSF46689	Homeodomain-like
Rpdx1_0732	SSF111369	HlyD-like secretion proteins
Rpdx1_0733	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0737	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0737	SSF55781	GAF domain-like
Rpdx1_0738	SSF53850	Periplasmic binding protein-like II
Rpdx1_0739	SSF50475	FMN-binding split barrel
Rpdx1_0740	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0741	SSF51338	Composite domain of metallo-dependent hydrolases
Rpdx1_0741	SSF51556	Metallo-dependent hydrolases
Rpdx1_0742	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0743	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0746	SSF159709	PhnH-like
Rpdx1_0748	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0748	SSF64288	Chorismate lyase-like
Rpdx1_0749	SSF161098	MetI-like
Rpdx1_0750	SSF161098	MetI-like
Rpdx1_0751	SSF53850	Periplasmic binding protein-like II
Rpdx1_0752	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0753	SSF51161	Trimeric LpxA-like enzymes
Rpdx1_0754	SSF51338	Composite domain of metallo-dependent hydrolases
Rpdx1_0754	SSF51556	Metallo-dependent hydrolases
Rpdx1_0756	SSF53474	alpha/beta-Hydrolases
Rpdx1_0759	SSF54913	GlnB-like
Rpdx1_0762	SSF49777	PEBP-like
Rpdx1_0763	SSF55469	FMN-dependent nitroreductase-like
Rpdx1_0764	SSF52733	Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
Rpdx1_0766	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0767	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0767	SSF90002	Hypothetical protein YjiA, C-terminal domain
Rpdx1_0769	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0770	SSF52317	Class I glutamine amidotransferase-like
Rpdx1_0770	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0772	SSF53807	"Helical backbone" metal receptor
Rpdx1_0773	SSF53383	PLP-dependent transferases
Rpdx1_0774	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0775	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Rpdx1_0778	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_0780	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0780	SSF53850	Periplasmic binding protein-like II
Rpdx1_0781	SSF52833	Thioredoxin-like
Rpdx1_0782	SSF140490	Nqo1C-terminal domain-like
Rpdx1_0782	SSF142019	Nqo1 FMN-binding domain-like
Rpdx1_0782	SSF142984	Nqo1 middle domain-like
Rpdx1_0782	SSF52833	Thioredoxin-like
Rpdx1_0783	SSF50692	ADC-like
Rpdx1_0783	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Rpdx1_0783	SSF54292	2Fe-2S ferredoxin-like
Rpdx1_0783	SSF54862	4Fe-4S ferredoxins
Rpdx1_0784	SSF53927	Cytidine deaminase-like
Rpdx1_0786	SSF103473	MFS general substrate transporter
Rpdx1_0787	SSF50952	Soluble quinoprotein glucose dehydrogenase
Rpdx1_0788	SSF46626	Cytochrome c
Rpdx1_0789	SSF52317	Class I glutamine amidotransferase-like
Rpdx1_0789	SSF56634	Heme-dependent catalase-like
Rpdx1_0790	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_0791	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0792	SSF53300	vWA-like
Rpdx1_0793	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_0794	SSF57652	HIPIP (high potential iron protein)
Rpdx1_0796	SSF48695	Multiheme cytochromes
Rpdx1_0797	SSF50331	MOP-like
Rpdx1_0797	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0798	SSF161098	MetI-like
Rpdx1_0799	SSF161098	MetI-like
Rpdx1_0800	SSF53850	Periplasmic binding protein-like II
Rpdx1_0801	SSF52402	Adenine nucleotide alpha hydrolases-like
Rpdx1_0802	SSF52402	Adenine nucleotide alpha hydrolases-like
Rpdx1_0803	SSF50447	Translation proteins
Rpdx1_0803	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Rpdx1_0803	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0804	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0805	SSF75304	Amidase signature (AS) enzymes
Rpdx1_0807	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0808	SSF161098	MetI-like
Rpdx1_0809	SSF161098	MetI-like
Rpdx1_0810	SSF53850	Periplasmic binding protein-like II
Rpdx1_0811	SSF53850	Periplasmic binding protein-like II
Rpdx1_0812	SSF47473	EF-hand
Rpdx1_0813	SSF56935	Porins
Rpdx1_0814	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0814	SSF51206	cAMP-binding domain-like
Rpdx1_0816	SSF55073	Nucleotide cyclase
Rpdx1_0816	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_0823	SSF53098	Ribonuclease H-like
Rpdx1_0826	SSF47413	lambda repressor-like DNA-binding domains
Rpdx1_0833	SSF47413	lambda repressor-like DNA-binding domains
Rpdx1_0834	SSF46955	Putative DNA-binding domain
Rpdx1_0837	SSF51306	LexA/Signal peptidase
Rpdx1_0839	SSF53955	Lysozyme-like
Rpdx1_0841	SSF56281	Metallo-hydrolase/oxidoreductase
Rpdx1_0842	SSF46689	Homeodomain-like
Rpdx1_0842	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_0843	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0843	SSF53850	Periplasmic binding protein-like II
Rpdx1_0844	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0846	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0849	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0853	SSF54427	NTF2-like
Rpdx1_0858	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0861	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0862	SSF53041	Resolvase-like
Rpdx1_0863	SSF56349	DNA breaking-rejoining enzymes
Rpdx1_0864	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0867	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0868	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_0869	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0870	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0877	SSF109709	KorB DNA-binding domain-like
Rpdx1_0877	SSF110849	ParB/Sulfiredoxin
Rpdx1_0880	SSF54909	Dimeric alpha+beta barrel
Rpdx1_0881	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0882	SSF55961	Bet v1-like
Rpdx1_0883	SSF53597	Dihydrofolate reductase-like
Rpdx1_0884	SSF46689	Homeodomain-like
Rpdx1_0884	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_0887	SSF47413	lambda repressor-like DNA-binding domains
Rpdx1_0891	SSF46955	Putative DNA-binding domain
Rpdx1_0893	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0894	SSF47598	Ribbon-helix-helix
Rpdx1_0896	SSF51306	LexA/Signal peptidase
Rpdx1_0898	SSF53955	Lysozyme-like
Rpdx1_0900	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Rpdx1_0901	SSF51182	RmlC-like cupins
Rpdx1_0902	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0903	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Rpdx1_0904	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Rpdx1_0905	SSF103473	MFS general substrate transporter
Rpdx1_0906	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0906	SSF53850	Periplasmic binding protein-like II
Rpdx1_0907	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0909	SSF53383	PLP-dependent transferases
Rpdx1_0910	SSF53474	alpha/beta-Hydrolases
Rpdx1_0912	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0913	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0914	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0917	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0921	SSF54427	NTF2-like
Rpdx1_0925	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0925	SSF53850	Periplasmic binding protein-like II
Rpdx1_0926	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0927	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_0928	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_0929	SSF53474	alpha/beta-Hydrolases
Rpdx1_0933	SSF56601	beta-lactamase/transpeptidase-like
Rpdx1_0936	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Rpdx1_0937	SSF141868	EAL domain-like
Rpdx1_0937	SSF55073	Nucleotide cyclase
Rpdx1_0937	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_0940	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_0940	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_0941	SSF46626	Cytochrome c
Rpdx1_0943	SSF141868	EAL domain-like
Rpdx1_0943	SSF55073	Nucleotide cyclase
Rpdx1_0943	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_0944	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0945	SSF48264	Cytochrome P450
Rpdx1_0946	SSF55073	Nucleotide cyclase
Rpdx1_0948	SSF103473	MFS general substrate transporter
Rpdx1_0949	SSF53383	PLP-dependent transferases
Rpdx1_0951	SSF50199	Staphylococcal nuclease
Rpdx1_0952	SSF48239	Terpenoid cyclases/Protein prenyltransferases
Rpdx1_0953	SSF52129	Caspase-like
Rpdx1_0954	SSF51069	Carbonic anhydrase
Rpdx1_0955	SSF51306	LexA/Signal peptidase
Rpdx1_0956	SSF56399	ADP-ribosylation
Rpdx1_0957	SSF51395	FMN-linked oxidoreductases
Rpdx1_0958	SSF56281	Metallo-hydrolase/oxidoreductase
Rpdx1_0959	SSF53056	beta-carbonic anhydrase, cab
Rpdx1_0962	SSF50249	Nucleic acid-binding proteins
Rpdx1_0962	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
Rpdx1_0963	SSF56281	Metallo-hydrolase/oxidoreductase
Rpdx1_0964	SSF56925	OMPA-like
Rpdx1_0965	SSF53822	Periplasmic binding protein-like I
Rpdx1_0966	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_0967	SSF56300	Metallo-dependent phosphatases
Rpdx1_0968	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0968	SSF53850	Periplasmic binding protein-like II
Rpdx1_0969	SSF103481	Multidrug resistance efflux transporter EmrE
Rpdx1_0973	SSF81901	HCP-like
Rpdx1_0974	SSF46689	Homeodomain-like
Rpdx1_0975	SSF54427	NTF2-like
Rpdx1_0976	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_0976	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_0977	SSF53901	Thiolase-like
Rpdx1_0979	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Rpdx1_0979	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_0979	SSF52096	ClpP/crotonase
Rpdx1_0980	SSF47616	GST C-terminal domain-like
Rpdx1_0980	SSF52833	Thioredoxin-like
Rpdx1_0981	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0981	SSF53850	Periplasmic binding protein-like II
Rpdx1_0982	SSF52833	Thioredoxin-like
Rpdx1_0983	SSF47240	Ferritin-like
Rpdx1_0984	SSF56281	Metallo-hydrolase/oxidoreductase
Rpdx1_0985	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0986	SSF55931	Glutamine synthetase/guanido kinase
Rpdx1_0988	SSF51306	LexA/Signal peptidase
Rpdx1_0989	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
Rpdx1_0990	SSF46689	Homeodomain-like
Rpdx1_0992	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_0993	SSF82784	OsmC-like
Rpdx1_0996	SSF49503	Cupredoxins
Rpdx1_0996	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
Rpdx1_0997	SSF81442	Cytochrome c oxidase subunit I-like
Rpdx1_1000	SSF110111	Ctag/Cox11
Rpdx1_1001	SSF81452	Cytochrome c oxidase subunit III-like
Rpdx1_1004	SSF143100	TTHA1013/TTHA0281-like
Rpdx1_1005	SSF54786	YcfA/nrd intein domain
Rpdx1_1006	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Rpdx1_1007	SSF63411	LuxS/MPP-like metallohydrolase
Rpdx1_1008	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_1012	SSF81333	F1F0 ATP synthase subunit C
Rpdx1_1013	SSF81336	F1F0 ATP synthase subunit A
Rpdx1_1015	SSF52833	Thioredoxin-like
Rpdx1_1017	SSF111038	YjbQ-like
Rpdx1_1018	SSF103473	MFS general substrate transporter
Rpdx1_1019	SSF46894	C-terminal effector domain of the bipartite response regulators
Rpdx1_1019	SSF52172	CheY-like
Rpdx1_1020	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_1020	SSF52172	CheY-like
Rpdx1_1020	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_1020	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_1021	SSF53383	PLP-dependent transferases
Rpdx1_1022	SSF56281	Metallo-hydrolase/oxidoreductase
Rpdx1_1023	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_1024	SSF56925	OMPA-like
Rpdx1_1025	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1026	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Rpdx1_1027	SSF53807	"Helical backbone" metal receptor
Rpdx1_1028	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1028	SSF90002	Hypothetical protein YjiA, C-terminal domain
Rpdx1_1029	SSF50998	Quinoprotein alcohol dehydrogenase-like
Rpdx1_1033	SSF54534	FKBP-like
Rpdx1_1034	SSF55298	YjgF-like
Rpdx1_1036	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_1037	SSF50621	Alanine racemase C-terminal domain-like
Rpdx1_1037	SSF51419	PLP-binding barrel
Rpdx1_1039	SSF55486	Metalloproteases ("zincins"), catalytic domain
Rpdx1_1042	SSF53800	Chelatase
Rpdx1_1043	SSF117892	Band 7/SPFH domain
Rpdx1_1045	SSF46689	Homeodomain-like
Rpdx1_1045	SSF55136	Probable bacterial effector-binding domain
Rpdx1_1046	SSF53697	SIS domain
Rpdx1_1049	SSF55073	Nucleotide cyclase
Rpdx1_1050	SSF53448	Nucleotide-diphospho-sugar transferases
Rpdx1_1051	SSF53474	alpha/beta-Hydrolases
Rpdx1_1052	SSF49764	HSP20-like chaperones
Rpdx1_1054	SSF51395	FMN-linked oxidoreductases
Rpdx1_1054	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Rpdx1_1054	SSF69336	Alpha subunit of glutamate synthase, C-terminal domain
Rpdx1_1055	SSF46548	alpha-helical ferredoxin
Rpdx1_1055	SSF51971	Nucleotide-binding domain
Rpdx1_1056	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_1057	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_1058	SSF52266	SGNH hydrolase
Rpdx1_1059	SSF51569	Aldolase
Rpdx1_1060	SSF47090	PGBD-like
Rpdx1_1060	SSF53955	Lysozyme-like
Rpdx1_1063	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Rpdx1_1064	SSF46689	Homeodomain-like
Rpdx1_1065	SSF56655	Carbohydrate phosphatase
Rpdx1_1067	SSF53187	Zn-dependent exopeptidases
Rpdx1_1068	SSF52172	CheY-like
Rpdx1_1069	SSF46689	Homeodomain-like
Rpdx1_1069	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_1070	SSF47741	CO dehydrogenase ISP C-domain like
Rpdx1_1070	SSF54292	2Fe-2S ferredoxin-like
Rpdx1_1071	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
Rpdx1_1071	SSF56176	FAD-binding/transporter-associated domain-like
Rpdx1_1072	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
Rpdx1_1072	SSF56003	Molybdenum cofactor-binding domain
Rpdx1_1074	SSF52218	Flavoproteins
Rpdx1_1075	SSF51182	RmlC-like cupins
Rpdx1_1076	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1076	SSF53850	Periplasmic binding protein-like II
Rpdx1_1078	SSF143456	VC0467-like
Rpdx1_1079	SSF141868	EAL domain-like
Rpdx1_1079	SSF55073	Nucleotide cyclase
Rpdx1_1079	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_1080	SSF50129	GroES-like
Rpdx1_1080	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_1083	SSF143800	L28p-like
Rpdx1_1084	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1084	SSF90123	ABC transporter transmembrane region
Rpdx1_1087	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_1088	SSF103088	OmpA-like
Rpdx1_1091	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_1094	SSF47413	lambda repressor-like DNA-binding domains
Rpdx1_1097	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Rpdx1_1098	SSF143968	UbiD C-terminal domain-like
Rpdx1_1098	SSF50475	FMN-binding split barrel
Rpdx1_1099	SSF55718	SCP-like
Rpdx1_1102	SSF56655	Carbohydrate phosphatase
Rpdx1_1103	SSF81901	HCP-like
Rpdx1_1104	SSF51391	Thiamin phosphate synthase
Rpdx1_1105	SSF51569	Aldolase
Rpdx1_1106	SSF53748	Phosphoglycerate kinase
Rpdx1_1107	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_1107	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Rpdx1_1108	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Rpdx1_1108	SSF52922	TK C-terminal domain-like
Rpdx1_1110	SSF102829	Cell division protein ZapA-like
Rpdx1_1111	SSF50249	Nucleic acid-binding proteins
Rpdx1_1111	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_1113	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_1113	SSF55174	Alpha-L RNA-binding motif
Rpdx1_1114	SSF52309	N-(deoxy)ribosyltransferase-like
Rpdx1_1115	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Rpdx1_1115	SSF52922	TK C-terminal domain-like
Rpdx1_1116	SSF116842	XseB-like
Rpdx1_1117	SSF52768	Arginase/deacetylase
Rpdx1_1118	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
Rpdx1_1118	SSF56300	Metallo-dependent phosphatases
Rpdx1_1119	SSF47175	Cytochromes
Rpdx1_1121	SSF56784	HAD-like
Rpdx1_1121	SSF81653	Calcium ATPase, transduction domain A
Rpdx1_1121	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
Rpdx1_1121	SSF81665	Calcium ATPase, transmembrane domain M
Rpdx1_1123	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_1123	SSF52402	Adenine nucleotide alpha hydrolases-like
Rpdx1_1123	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1123	SSF55781	GAF domain-like
Rpdx1_1123	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_1124	SSF52172	CheY-like
Rpdx1_1125	SSF52096	ClpP/crotonase
Rpdx1_1126	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_1126	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_1127	SSF160467	PH0987 N-terminal domain-like
Rpdx1_1127	SSF50891	Cyclophilin-like
Rpdx1_1127	SSF51230	Single hybrid motif
Rpdx1_1127	SSF51246	Rudiment single hybrid motif
Rpdx1_1127	SSF52440	PreATP-grasp domain
Rpdx1_1127	SSF56059	Glutathione synthetase ATP-binding domain-like
Rpdx1_1130	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1131	SSF161098	MetI-like
Rpdx1_1132	SSF53850	Periplasmic binding protein-like II
Rpdx1_1133	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_1133	SSF52172	CheY-like
Rpdx1_1133	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_1133	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_1134	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1134	SSF55781	GAF domain-like
Rpdx1_1135	SSF50022	ISP domain
Rpdx1_1135	SSF55961	Bet v1-like
Rpdx1_1136	SSF54368	Glutamine synthetase, N-terminal domain
Rpdx1_1136	SSF55931	Glutamine synthetase/guanido kinase
Rpdx1_1137	SSF53822	Periplasmic binding protein-like I
Rpdx1_1140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1141	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1142	SSF52172	CheY-like
Rpdx1_1142	SSF55781	GAF domain-like
Rpdx1_1142	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_1143	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1143	SSF51206	cAMP-binding domain-like
Rpdx1_1144	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1144	SSF51206	cAMP-binding domain-like
Rpdx1_1145	SSF53254	Phosphoglycerate mutase-like
Rpdx1_1147	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_1147	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_1148	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1149	SSF53822	Periplasmic binding protein-like I
Rpdx1_1150	SSF75304	Amidase signature (AS) enzymes
Rpdx1_1152	SSF53822	Periplasmic binding protein-like I
Rpdx1_1154	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1155	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1156	SSF53474	alpha/beta-Hydrolases
Rpdx1_1157	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1158	SSF52821	Rhodanese/Cell cycle control phosphatase
Rpdx1_1159	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_1160	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_1161	SSF52833	Thioredoxin-like
Rpdx1_1163	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
Rpdx1_1163	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
Rpdx1_1165	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_1167	SSF55811	Nudix
Rpdx1_1168	SSF48076	LigA subunit of an aromatic-ring-opening dioxygenase LigAB
Rpdx1_1169	SSF53213	LigB-like
Rpdx1_1170	SSF48264	Cytochrome P450
Rpdx1_1173	SSF54862	4Fe-4S ferredoxins
Rpdx1_1175	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1176	SSF50022	ISP domain
Rpdx1_1177	SSF53146	Nitrogenase accessory factor-like
Rpdx1_1179	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1180	SSF111369	HlyD-like secretion proteins
Rpdx1_1181	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Rpdx1_1181	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Rpdx1_1181	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Rpdx1_1182	SSF52833	Thioredoxin-like
Rpdx1_1184	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Rpdx1_1184	SSF63380	Riboflavin synthase domain-like
Rpdx1_1185	SSF55856	Cytochrome b5-like heme/steroid binding domain
Rpdx1_1186	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_1188	SSF53218	Molybdenum cofactor biosynthesis proteins
Rpdx1_1189	SSF100950	NagB/RpiA/CoA transferase-like
Rpdx1_1190	SSF100950	NagB/RpiA/CoA transferase-like
Rpdx1_1192	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_1194	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1194	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_1195	SSF53448	Nucleotide-diphospho-sugar transferases
Rpdx1_1196	SSF102114	Radical SAM enzymes
Rpdx1_1197	SSF53098	Ribonuclease H-like
Rpdx1_1199	SSF56935	Porins
Rpdx1_1200	SSF52141	Uracil-DNA glycosylase-like
Rpdx1_1201	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_1201	SSF54373	FAD-linked reductases, C-terminal domain
Rpdx1_1201	SSF54862	4Fe-4S ferredoxins
Rpdx1_1202	SSF48452	TPR-like
Rpdx1_1203	SSF54211	Ribosomal protein S5 domain 2-like
Rpdx1_1203	SSF55060	GHMP Kinase, C-terminal domain
Rpdx1_1204	SSF48576	Terpenoid synthases
Rpdx1_1205	SSF54913	GlnB-like
Rpdx1_1206	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_1208	SSF52096	ClpP/crotonase
Rpdx1_1210	SSF55681	Class II aaRS and biotin synthetases
Rpdx1_1211	SSF52980	Restriction endonuclease-like
Rpdx1_1212	SSF109604	HD-domain/PDEase-like
Rpdx1_1216	SSF51621	Phosphoenolpyruvate/pyruvate domain
Rpdx1_1216	SSF52009	Phosphohistidine domain
Rpdx1_1216	SSF56059	Glutathione synthetase ATP-binding domain-like
Rpdx1_1218	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
Rpdx1_1218	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
Rpdx1_1219	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
Rpdx1_1219	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_1219	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Rpdx1_1220	SSF142754	NadA-like
Rpdx1_1221	SSF50129	GroES-like
Rpdx1_1221	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_1223	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1223	SSF53383	PLP-dependent transferases
Rpdx1_1224	SSF50447	Translation proteins
Rpdx1_1224	SSF55186	ThrRS/AlaRS common domain
Rpdx1_1226	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1227	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1229	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1229	SSF55811	Nudix
Rpdx1_1230	SSF52799	(Phosphotyrosine protein) phosphatases II
Rpdx1_1231	SSF109604	HD-domain/PDEase-like
Rpdx1_1232	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1232	SSF53850	Periplasmic binding protein-like II
Rpdx1_1234	SSF48150	DNA-glycosylase
Rpdx1_1235	SSF103025	Folate-binding domain
Rpdx1_1236	SSF51338	Composite domain of metallo-dependent hydrolases
Rpdx1_1236	SSF51556	Metallo-dependent hydrolases
Rpdx1_1240	SSF55811	Nudix
Rpdx1_1242	SSF143081	BB1717-like
Rpdx1_1243	SSF55103	FAD-linked oxidases, C-terminal domain
Rpdx1_1243	SSF56176	FAD-binding/transporter-associated domain-like
Rpdx1_1244	SSF55821	YrdC/RibB
Rpdx1_1245	SSF46689	Homeodomain-like
Rpdx1_1246	SSF103473	MFS general substrate transporter
Rpdx1_1247	SSF51556	Metallo-dependent hydrolases
Rpdx1_1254	SSF53955	Lysozyme-like
Rpdx1_1257	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1257	SSF51206	cAMP-binding domain-like
Rpdx1_1259	SSF69118	AhpD-like
Rpdx1_1260	SSF142695	RibA-like
Rpdx1_1260	SSF55821	YrdC/RibB
Rpdx1_1261	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_1261	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_1262	SSF56281	Metallo-hydrolase/oxidoreductase
Rpdx1_1263	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_1264	SSF75625	YebC-like
Rpdx1_1265	SSF53098	Ribonuclease H-like
Rpdx1_1267	SSF46929	DNA helicase RuvA subunit, C-terminal domain
Rpdx1_1267	SSF47781	RuvA domain 2-like
Rpdx1_1267	SSF50249	Nucleic acid-binding proteins
Rpdx1_1268	SSF53927	Cytidine deaminase-like
Rpdx1_1270	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1270	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1272	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_1273	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_1275	SSF54427	NTF2-like
Rpdx1_1276	SSF46689	Homeodomain-like
Rpdx1_1276	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_1277	SSF54909	Dimeric alpha+beta barrel
Rpdx1_1278	SSF48452	TPR-like
Rpdx1_1278	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Rpdx1_1278	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Rpdx1_1279	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_1282	SSF54909	Dimeric alpha+beta barrel
Rpdx1_1283	SSF46689	Homeodomain-like
Rpdx1_1283	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_1285	SSF69118	AhpD-like
Rpdx1_1286	SSF54427	NTF2-like
Rpdx1_1286	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Rpdx1_1286	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Rpdx1_1290	SSF52964	TolB, N-terminal domain
Rpdx1_1290	SSF69304	Tricorn protease N-terminal domain
Rpdx1_1291	SSF141868	EAL domain-like
Rpdx1_1291	SSF55073	Nucleotide cyclase
Rpdx1_1291	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_1292	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_1293	SSF103088	OmpA-like
Rpdx1_1294	SSF48452	TPR-like
Rpdx1_1295	SSF52402	Adenine nucleotide alpha hydrolases-like
Rpdx1_1296	SSF140990	FtsH protease domain-like
Rpdx1_1296	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1297	SSF55469	FMN-dependent nitroreductase-like
Rpdx1_1300	SSF46689	Homeodomain-like
Rpdx1_1300	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_1301	SSF55103	FAD-linked oxidases, C-terminal domain
Rpdx1_1301	SSF56176	FAD-binding/transporter-associated domain-like
Rpdx1_1302	SSF55103	FAD-linked oxidases, C-terminal domain
Rpdx1_1302	SSF56176	FAD-binding/transporter-associated domain-like
Rpdx1_1303	SSF52402	Adenine nucleotide alpha hydrolases-like
Rpdx1_1303	SSF54862	4Fe-4S ferredoxins
Rpdx1_1305	SSF56935	Porins
Rpdx1_1306	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1306	SSF90123	ABC transporter transmembrane region
Rpdx1_1308	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_1310	SSF48592	GroEL equatorial domain-like
Rpdx1_1310	SSF52029	GroEL apical domain-like
Rpdx1_1310	SSF54849	GroEL-intermediate domain like
Rpdx1_1311	SSF50129	GroES-like
Rpdx1_1313	SSF103473	MFS general substrate transporter
Rpdx1_1314	SSF75708	Chemotaxis phosphatase CheZ
Rpdx1_1315	SSF141523	L,D-transpeptidase catalytic domain-like
Rpdx1_1317	SSF88713	Glycoside hydrolase/deacetylase
Rpdx1_1318	SSF53448	Nucleotide-diphospho-sugar transferases
Rpdx1_1319	SSF53850	Periplasmic binding protein-like II
Rpdx1_1320	SSF55681	Class II aaRS and biotin synthetases
Rpdx1_1321	SSF75217	alpha/beta knot
Rpdx1_1321	SSF88697	PUA domain-like
Rpdx1_1325	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
Rpdx1_1326	SSF56655	Carbohydrate phosphatase
Rpdx1_1329	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1332	SSF51246	Rudiment single hybrid motif
Rpdx1_1332	SSF52440	PreATP-grasp domain
Rpdx1_1332	SSF56059	Glutathione synthetase ATP-binding domain-like
Rpdx1_1333	SSF53474	alpha/beta-Hydrolases
Rpdx1_1334	SSF53927	Cytidine deaminase-like
Rpdx1_1335	SSF55120	Pseudouridine synthase
Rpdx1_1335	SSF55174	Alpha-L RNA-binding motif
Rpdx1_1336	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_1337	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_1338	SSF54690	Molybdopterin synthase subunit MoaE
Rpdx1_1339	SSF54285	MoaD/ThiS
Rpdx1_1341	SSF46600	C-terminal UvrC-binding domain of UvrB
Rpdx1_1341	SSF47781	RuvA domain 2-like
Rpdx1_1341	SSF82771	GIY-YIG endonuclease
Rpdx1_1342	SSF56925	OMPA-like
Rpdx1_1343	SSF50249	Nucleic acid-binding proteins
Rpdx1_1344	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_1345	SSF52172	CheY-like
Rpdx1_1346	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_1347	SSF55331	Tautomerase/MIF
Rpdx1_1348	SSF52954	Class II aaRS ABD-related
Rpdx1_1348	SSF55681	Class II aaRS and biotin synthetases
Rpdx1_1349	SSF53383	PLP-dependent transferases
Rpdx1_1350	SSF141868	EAL domain-like
Rpdx1_1351	SSF56784	HAD-like
Rpdx1_1352	SSF52317	Class I glutamine amidotransferase-like
Rpdx1_1353	SSF52317	Class I glutamine amidotransferase-like
Rpdx1_1355	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1357	SSF55811	Nudix
Rpdx1_1359	SSF81301	Nucleotidyltransferase
Rpdx1_1359	SSF81891	Poly A polymerase C-terminal region-like
Rpdx1_1361	SSF102114	Radical SAM enzymes
Rpdx1_1362	SSF75217	alpha/beta knot
Rpdx1_1363	SSF50022	ISP domain
Rpdx1_1364	SSF46626	Cytochrome c
Rpdx1_1364	SSF81342	Transmembrane di-heme cytochromes
Rpdx1_1364	SSF81496	Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
Rpdx1_1364	SSF81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Rpdx1_1365	SSF53474	alpha/beta-Hydrolases
Rpdx1_1367	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_1368	SSF50475	FMN-binding split barrel
Rpdx1_1370	SSF46565	Chaperone J-domain
Rpdx1_1370	SSF49493	HSP40/DnaJ peptide-binding domain
Rpdx1_1371	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_1372	SSF53254	Phosphoglycerate mutase-like
Rpdx1_1373	SSF103263	Chorismate synthase, AroC
Rpdx1_1374	SSF55073	Nucleotide cyclase
Rpdx1_1375	SSF54736	ClpS-like
Rpdx1_1376	SSF53300	vWA-like
Rpdx1_1379	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1381	SSF53474	alpha/beta-Hydrolases
Rpdx1_1383	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1384	SSF161098	MetI-like
Rpdx1_1385	SSF161098	MetI-like
Rpdx1_1386	SSF53187	Zn-dependent exopeptidases
Rpdx1_1386	SSF55031	Bacterial exopeptidase dimerisation domain
Rpdx1_1387	SSF53850	Periplasmic binding protein-like II
Rpdx1_1389	SSF54631	CBS-domain pair
Rpdx1_1393	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Rpdx1_1393	SSF52922	TK C-terminal domain-like
Rpdx1_1394	SSF58113	Apolipoprotein A-I
Rpdx1_1395	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Rpdx1_1396	SSF54292	2Fe-2S ferredoxin-like
Rpdx1_1397	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_1398	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_1399	SSF81340	Clc chloride channel
Rpdx1_1400	SSF53448	Nucleotide-diphospho-sugar transferases
Rpdx1_1401	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_1404	SSF52266	SGNH hydrolase
Rpdx1_1407	SSF47240	Ferritin-like
Rpdx1_1410	SSF52402	Adenine nucleotide alpha hydrolases-like
Rpdx1_1411	SSF53254	Phosphoglycerate mutase-like
Rpdx1_1412	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_1413	SSF51316	Mss4-like
Rpdx1_1417	SSF117143	Flagellar hook protein flgE
Rpdx1_1418	SSF64518	Phase 1 flagellin
Rpdx1_1419	SSF64518	Phase 1 flagellin
Rpdx1_1420	SSF64518	Phase 1 flagellin
Rpdx1_1421	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_1422	SSF53697	SIS domain
Rpdx1_1423	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_1424	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_1425	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_1426	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Rpdx1_1427	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Rpdx1_1427	SSF52922	TK C-terminal domain-like
Rpdx1_1429	SSF50129	GroES-like
Rpdx1_1429	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_1430	SSF52374	Nucleotidylyl transferase
Rpdx1_1430	SSF53613	Ribokinase-like
Rpdx1_1431	SSF53448	Nucleotide-diphospho-sugar transferases
Rpdx1_1432	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_1433	SSF52467	DHS-like NAD/FAD-binding domain
Rpdx1_1433	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Rpdx1_1434	SSF48452	TPR-like
Rpdx1_1434	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_1435	SSF64518	Phase 1 flagellin
Rpdx1_1443	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
Rpdx1_1443	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Rpdx1_1445	SSF46689	Homeodomain-like
Rpdx1_1445	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_1446	SSF111369	HlyD-like secretion proteins
Rpdx1_1447	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Rpdx1_1447	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Rpdx1_1447	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Rpdx1_1450	SSF117143	Flagellar hook protein flgE
Rpdx1_1451	SSF117143	Flagellar hook protein flgE
Rpdx1_1453	SSF101801	Surface presentation of antigens (SPOA)
Rpdx1_1453	SSF103039	CheC-like
Rpdx1_1457	SSF48452	TPR-like
Rpdx1_1465	SSF160544	EscU C-terminal domain-like
Rpdx1_1466	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_1466	SSF52172	CheY-like
Rpdx1_1466	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_1466	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_1469	SSF54427	NTF2-like
Rpdx1_1470	SSF47616	GST C-terminal domain-like
Rpdx1_1470	SSF52833	Thioredoxin-like
Rpdx1_1471	SSF51316	Mss4-like
Rpdx1_1476	SSF117457	FumA C-terminal domain-like
Rpdx1_1483	SSF82199	SET domain
Rpdx1_1485	SSF47413	lambda repressor-like DNA-binding domains
Rpdx1_1486	SSF52833	Thioredoxin-like
Rpdx1_1487	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_1488	SSF52129	Caspase-like
Rpdx1_1489	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_1492	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1492	SSF51206	cAMP-binding domain-like
Rpdx1_1498	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1498	SSF54752	RecA protein, C-terminal domain
Rpdx1_1499	SSF53383	PLP-dependent transferases
Rpdx1_1500	SSF51230	Single hybrid motif
Rpdx1_1501	SSF101790	Aminomethyltransferase beta-barrel domain
Rpdx1_1501	SSF103025	Folate-binding domain
Rpdx1_1502	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
Rpdx1_1502	SSF50447	Translation proteins
Rpdx1_1502	SSF55186	ThrRS/AlaRS common domain
Rpdx1_1502	SSF55681	Class II aaRS and biotin synthetases
Rpdx1_1503	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_1504	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_1505	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_1508	SSF56935	Porins
Rpdx1_1509	SSF46689	Homeodomain-like
Rpdx1_1510	SSF103481	Multidrug resistance efflux transporter EmrE
Rpdx1_1511	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Rpdx1_1512	SSF52980	Restriction endonuclease-like
Rpdx1_1512	SSF75217	alpha/beta knot
Rpdx1_1514	SSF52141	Uracil-DNA glycosylase-like
Rpdx1_1515	SSF54534	FKBP-like
Rpdx1_1518	SSF51621	Phosphoenolpyruvate/pyruvate domain
Rpdx1_1522	SSF56104	SAICAR synthase-like
Rpdx1_1523	SSF82697	PurS-like
Rpdx1_1525	SSF52317	Class I glutamine amidotransferase-like
Rpdx1_1526	SSF48557	L-aspartase-like
Rpdx1_1528	SSF51366	Ribulose-phoshate binding barrel
Rpdx1_1529	SSF47473	EF-hand
Rpdx1_1530	SSF56266	DmpA/ArgJ-like
Rpdx1_1532	SSF82771	GIY-YIG endonuclease
Rpdx1_1533	SSF53822	Periplasmic binding protein-like I
Rpdx1_1534	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1535	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1539	SSF55961	Bet v1-like
Rpdx1_1540	SSF47741	CO dehydrogenase ISP C-domain like
Rpdx1_1540	SSF54292	2Fe-2S ferredoxin-like
Rpdx1_1541	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
Rpdx1_1541	SSF56176	FAD-binding/transporter-associated domain-like
Rpdx1_1542	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1543	SSF53300	vWA-like
Rpdx1_1546	SSF53218	Molybdenum cofactor biosynthesis proteins
Rpdx1_1546	SSF53448	Nucleotide-diphospho-sugar transferases
Rpdx1_1547	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1547	SSF53850	Periplasmic binding protein-like II
Rpdx1_1548	SSF52096	ClpP/crotonase
Rpdx1_1552	SSF55073	Nucleotide cyclase
Rpdx1_1553	SSF46689	Homeodomain-like
Rpdx1_1553	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_1554	SSF111369	HlyD-like secretion proteins
Rpdx1_1555	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1559	SSF117396	TM1631-like
Rpdx1_1560	SSF53448	Nucleotide-diphospho-sugar transferases
Rpdx1_1562	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_1562	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Rpdx1_1563	SSF53613	Ribokinase-like
Rpdx1_1564	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Rpdx1_1565	SSF141523	L,D-transpeptidase catalytic domain-like
Rpdx1_1566	SSF48264	Cytochrome P450
Rpdx1_1567	SSF46689	Homeodomain-like
Rpdx1_1568	SSF111369	HlyD-like secretion proteins
Rpdx1_1569	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Rpdx1_1569	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Rpdx1_1569	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Rpdx1_1570	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_1570	SSF54373	FAD-linked reductases, C-terminal domain
Rpdx1_1572	SSF53474	alpha/beta-Hydrolases
Rpdx1_1575	SSF46689	Homeodomain-like
Rpdx1_1575	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_1576	SSF47240	Ferritin-like
Rpdx1_1578	SSF47240	Ferritin-like
Rpdx1_1579	SSF117916	Fe-S cluster assembly (FSCA) domain-like
Rpdx1_1580	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Rpdx1_1580	SSF54292	2Fe-2S ferredoxin-like
Rpdx1_1580	SSF63380	Riboflavin synthase domain-like
Rpdx1_1581	SSF52467	DHS-like NAD/FAD-binding domain
Rpdx1_1581	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Rpdx1_1582	SSF56529	FAH
Rpdx1_1583	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Rpdx1_1584	SSF53720	ALDH-like
Rpdx1_1585	SSF55331	Tautomerase/MIF
Rpdx1_1586	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1587	SSF89733	L-sulfolactate dehydrogenase-like
Rpdx1_1589	SSF51621	Phosphoenolpyruvate/pyruvate domain
Rpdx1_1591	SSF54001	Cysteine proteinases
Rpdx1_1592	SSF56059	Glutathione synthetase ATP-binding domain-like
Rpdx1_1593	SSF54001	Cysteine proteinases
Rpdx1_1595	SSF158472	HAMP domain-like
Rpdx1_1595	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_1597	SSF102114	Radical SAM enzymes
Rpdx1_1599	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Rpdx1_1602	SSF48576	Terpenoid synthases
Rpdx1_1603	SSF48576	Terpenoid synthases
Rpdx1_1604	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_1605	SSF48239	Terpenoid cyclases/Protein prenyltransferases
Rpdx1_1606	SSF53167	Purine and uridine phosphorylases
Rpdx1_1608	SSF102114	Radical SAM enzymes
Rpdx1_1610	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Rpdx1_1611	SSF53383	PLP-dependent transferases
Rpdx1_1612	SSF52402	Adenine nucleotide alpha hydrolases-like
Rpdx1_1613	SSF89447	AbrB/MazE/MraZ-like
Rpdx1_1614	SSF88723	PIN domain-like
Rpdx1_1616	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_1618	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_1618	SSF54373	FAD-linked reductases, C-terminal domain
Rpdx1_1619	SSF53187	Zn-dependent exopeptidases
Rpdx1_1619	SSF55031	Bacterial exopeptidase dimerisation domain
Rpdx1_1621	SSF56925	OMPA-like
Rpdx1_1622	SSF143865	CorA soluble domain-like
Rpdx1_1622	SSF144083	Magnesium transport protein CorA, transmembrane region
Rpdx1_1623	SSF47240	Ferritin-like
Rpdx1_1624	SSF53822	Periplasmic binding protein-like I
Rpdx1_1625	SSF53822	Periplasmic binding protein-like I
Rpdx1_1626	SSF53822	Periplasmic binding protein-like I
Rpdx1_1629	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1630	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1631	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1631	SSF55781	GAF domain-like
Rpdx1_1632	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Rpdx1_1632	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_1632	SSF52096	ClpP/crotonase
Rpdx1_1634	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_1635	SSF53901	Thiolase-like
Rpdx1_1636	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_1636	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_1637	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_1637	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_1638	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_1639	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Rpdx1_1639	SSF63380	Riboflavin synthase domain-like
Rpdx1_1640	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
Rpdx1_1640	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
Rpdx1_1641	SSF46458	Globin-like
Rpdx1_1642	SSF46458	Globin-like
Rpdx1_1643	SSF53850	Periplasmic binding protein-like II
Rpdx1_1645	SSF52172	CheY-like
Rpdx1_1646	SSF53067	Actin-like ATPase domain
Rpdx1_1649	SSF47616	GST C-terminal domain-like
Rpdx1_1649	SSF52833	Thioredoxin-like
Rpdx1_1650	SSF47644	Methionine synthase domain
Rpdx1_1650	SSF51717	Dihydropteroate synthetase-like
Rpdx1_1650	SSF52242	Cobalamin (vitamin B12)-binding domain
Rpdx1_1650	SSF56507	Methionine synthase activation domain-like
Rpdx1_1650	SSF82282	Homocysteine S-methyltransferase
Rpdx1_1651	SSF52980	Restriction endonuclease-like
Rpdx1_1652	SSF51730	FAD-linked oxidoreductase
Rpdx1_1653	SSF51679	Bacterial luciferase-like
Rpdx1_1654	SSF53850	Periplasmic binding protein-like II
Rpdx1_1654	SSF55021	ACT-like
Rpdx1_1655	SSF53448	Nucleotide-diphospho-sugar transferases
Rpdx1_1656	SSF46626	Cytochrome c
Rpdx1_1657	SSF53850	Periplasmic binding protein-like II
Rpdx1_1658	SSF53850	Periplasmic binding protein-like II
Rpdx1_1659	SSF161098	MetI-like
Rpdx1_1660	SSF161098	MetI-like
Rpdx1_1661	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1662	SSF55811	Nudix
Rpdx1_1663	SSF50044	SH3-domain
Rpdx1_1663	SSF54001	Cysteine proteinases
Rpdx1_1664	SSF53187	Zn-dependent exopeptidases
Rpdx1_1665	SSF48452	TPR-like
Rpdx1_1668	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1669	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1678	SSF50249	Nucleic acid-binding proteins
Rpdx1_1679	SSF50249	Nucleic acid-binding proteins
Rpdx1_1680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1681	SSF53822	Periplasmic binding protein-like I
Rpdx1_1684	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1685	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1687	SSF54111	Urease, gamma-subunit
Rpdx1_1688	SSF51278	Urease, beta-subunit
Rpdx1_1689	SSF51338	Composite domain of metallo-dependent hydrolases
Rpdx1_1689	SSF51556	Metallo-dependent hydrolases
Rpdx1_1690	SSF54909	Dimeric alpha+beta barrel
Rpdx1_1691	SSF69287	Urease metallochaperone UreE, N-terminal domain
Rpdx1_1691	SSF69737	Urease metallochaperone UreE, C-terminal domain
Rpdx1_1693	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_1694	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
Rpdx1_1695	SSF50129	GroES-like
Rpdx1_1695	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_1696	SSF53448	Nucleotide-diphospho-sugar transferases
Rpdx1_1697	SSF64307	SirA-like
Rpdx1_1700	SSF100939	SPOC domain-like
Rpdx1_1701	SSF50249	Nucleic acid-binding proteins
Rpdx1_1701	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
Rpdx1_1704	SSF51445	(Trans)glycosidases
Rpdx1_1705	SSF51445	(Trans)glycosidases
Rpdx1_1705	SSF81296	E set domains
Rpdx1_1706	SSF51011	Glycosyl hydrolase domain
Rpdx1_1706	SSF51445	(Trans)glycosidases
Rpdx1_1706	SSF81296	E set domains
Rpdx1_1707	SSF51011	Glycosyl hydrolase domain
Rpdx1_1707	SSF51445	(Trans)glycosidases
Rpdx1_1707	SSF81296	E set domains
Rpdx1_1708	SSF51011	Glycosyl hydrolase domain
Rpdx1_1708	SSF51445	(Trans)glycosidases
Rpdx1_1708	SSF56112	Protein kinase-like (PK-like)
Rpdx1_1709	SSF51445	(Trans)glycosidases
Rpdx1_1710	SSF51445	(Trans)glycosidases
Rpdx1_1711	SSF48208	Six-hairpin glycosidases
Rpdx1_1712	SSF56784	HAD-like
Rpdx1_1713	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1714	SSF100950	NagB/RpiA/CoA transferase-like
Rpdx1_1715	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_1715	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Rpdx1_1716	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Rpdx1_1716	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_1717	SSF51569	Aldolase
Rpdx1_1717	SSF53697	SIS domain
Rpdx1_1718	SSF53474	alpha/beta-Hydrolases
Rpdx1_1720	SSF75304	Amidase signature (AS) enzymes
Rpdx1_1721	SSF52833	Thioredoxin-like
Rpdx1_1723	SSF82771	GIY-YIG endonuclease
Rpdx1_1725	SSF63829	Calcium-dependent phosphotriesterase
Rpdx1_1726	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_1728	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Rpdx1_1728	SSF54292	2Fe-2S ferredoxin-like
Rpdx1_1728	SSF63380	Riboflavin synthase domain-like
Rpdx1_1729	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1729	SSF48008	GntR ligand-binding domain-like
Rpdx1_1730	SSF50022	ISP domain
Rpdx1_1730	SSF55961	Bet v1-like
Rpdx1_1731	SSF103032	Hypothetical protein YwqG
Rpdx1_1732	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1734	SSF55073	Nucleotide cyclase
Rpdx1_1734	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_1736	SSF52821	Rhodanese/Cell cycle control phosphatase
Rpdx1_1737	SSF52821	Rhodanese/Cell cycle control phosphatase
Rpdx1_1739	SSF141523	L,D-transpeptidase catalytic domain-like
Rpdx1_1742	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1743	SSF88723	PIN domain-like
Rpdx1_1744	SSF89447	AbrB/MazE/MraZ-like
Rpdx1_1745	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_1747	SSF47090	PGBD-like
Rpdx1_1747	SSF53955	Lysozyme-like
Rpdx1_1751	SSF47240	Ferritin-like
Rpdx1_1753	SSF158472	HAMP domain-like
Rpdx1_1753	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_1755	SSF55136	Probable bacterial effector-binding domain
Rpdx1_1762	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_1762	SSF54373	FAD-linked reductases, C-terminal domain
Rpdx1_1766	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_1768	SSF143422	Transposase IS200-like
Rpdx1_1771	SSF47598	Ribbon-helix-helix
Rpdx1_1772	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_1773	SSF54427	NTF2-like
Rpdx1_1778	SSF51391	Thiamin phosphate synthase
Rpdx1_1779	SSF110399	ThiG-like
Rpdx1_1781	SSF54285	MoaD/ThiS
Rpdx1_1782	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_1782	SSF54373	FAD-linked reductases, C-terminal domain
Rpdx1_1783	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_1783	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_1784	SSF46894	C-terminal effector domain of the bipartite response regulators
Rpdx1_1784	SSF52172	CheY-like
Rpdx1_1786	SSF50346	PRC-barrel domain
Rpdx1_1788	SSF57652	HIPIP (high potential iron protein)
Rpdx1_1789	SSF141523	L,D-transpeptidase catalytic domain-like
Rpdx1_1790	SSF53383	PLP-dependent transferases
Rpdx1_1792	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_1793	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1794	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1796	SSF52833	Thioredoxin-like
Rpdx1_1797	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1798	SSF52788	Phosphotyrosine protein phosphatases I
Rpdx1_1799	SSF52833	Thioredoxin-like
Rpdx1_1801	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_1802	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_1803	SSF102114	Radical SAM enzymes
Rpdx1_1803	SSF52242	Cobalamin (vitamin B12)-binding domain
Rpdx1_1804	SSF56784	HAD-like
Rpdx1_1805	SSF103515	Autotransporter
Rpdx1_1805	SSF51126	Pectin lyase-like
Rpdx1_1807	SSF103190	Sensory domain-like
Rpdx1_1807	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_1809	SSF46689	Homeodomain-like
Rpdx1_1809	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_1810	SSF111369	HlyD-like secretion proteins
Rpdx1_1811	SSF103473	MFS general substrate transporter
Rpdx1_1813	SSF47090	PGBD-like
Rpdx1_1813	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
Rpdx1_1814	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_1814	SSF81799	Putative methyltransferase TM0872, insert domain
Rpdx1_1816	SSF56519	Penicillin binding protein dimerisation domain
Rpdx1_1816	SSF56601	beta-lactamase/transpeptidase-like
Rpdx1_1817	SSF53244	MurD-like peptide ligases, peptide-binding domain
Rpdx1_1817	SSF53623	MurD-like peptide ligases, catalytic domain
Rpdx1_1817	SSF63418	MurE/MurF N-terminal domain
Rpdx1_1818	SSF53244	MurD-like peptide ligases, peptide-binding domain
Rpdx1_1818	SSF53623	MurD-like peptide ligases, catalytic domain
Rpdx1_1818	SSF63418	MurE/MurF N-terminal domain
Rpdx1_1820	SSF51984	MurCD N-terminal domain
Rpdx1_1820	SSF53244	MurD-like peptide ligases, peptide-binding domain
Rpdx1_1820	SSF53623	MurD-like peptide ligases, catalytic domain
Rpdx1_1822	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_1823	SSF51984	MurCD N-terminal domain
Rpdx1_1823	SSF53244	MurD-like peptide ligases, peptide-binding domain
Rpdx1_1823	SSF53623	MurD-like peptide ligases, catalytic domain
Rpdx1_1825	SSF56176	FAD-binding/transporter-associated domain-like
Rpdx1_1825	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
Rpdx1_1828	SSF52440	PreATP-grasp domain
Rpdx1_1828	SSF56059	Glutathione synthetase ATP-binding domain-like
Rpdx1_1831	SSF53067	Actin-like ATPase domain
Rpdx1_1832	SSF52490	Tubulin nucleotide-binding domain-like
Rpdx1_1832	SSF55307	Tubulin C-terminal domain-like
Rpdx1_1833	SSF54211	Ribosomal protein S5 domain 2-like
Rpdx1_1834	SSF48452	TPR-like
Rpdx1_1835	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1836	SSF82771	GIY-YIG endonuclease
Rpdx1_1837	SSF47781	RuvA domain 2-like
Rpdx1_1837	SSF50249	Nucleic acid-binding proteins
Rpdx1_1837	SSF52113	BRCT domain
Rpdx1_1837	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
Rpdx1_1838	SSF103473	MFS general substrate transporter
Rpdx1_1839	SSF53092	Creatinase/prolidase N-terminal domain
Rpdx1_1839	SSF55920	Creatinase/aminopeptidase
Rpdx1_1841	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_1843	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_1844	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_1845	SSF141523	L,D-transpeptidase catalytic domain-like
Rpdx1_1848	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1849	SSF143100	TTHA1013/TTHA0281-like
Rpdx1_1850	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1852	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_1853	SSF55103	FAD-linked oxidases, C-terminal domain
Rpdx1_1853	SSF56176	FAD-binding/transporter-associated domain-like
Rpdx1_1857	SSF48557	L-aspartase-like
Rpdx1_1858	SSF101738	SspB-like
Rpdx1_1863	SSF53850	Periplasmic binding protein-like II
Rpdx1_1864	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
Rpdx1_1866	SSF53597	Dihydrofolate reductase-like
Rpdx1_1867	SSF117892	Band 7/SPFH domain
Rpdx1_1868	SSF117892	Band 7/SPFH domain
Rpdx1_1870	SSF50156	PDZ domain-like
Rpdx1_1870	SSF50494	Trypsin-like serine proteases
Rpdx1_1871	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_1875	SSF89796	CoA-transferase family III (CaiB/BaiF)
Rpdx1_1876	SSF81301	Nucleotidyltransferase
Rpdx1_1877	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
Rpdx1_1879	SSF46689	Homeodomain-like
Rpdx1_1879	SSF53098	Ribonuclease H-like
Rpdx1_1880	SSF56349	DNA breaking-rejoining enzymes
Rpdx1_1881	SSF50249	Nucleic acid-binding proteins
Rpdx1_1883	SSF53041	Resolvase-like
Rpdx1_1889	SSF89447	AbrB/MazE/MraZ-like
Rpdx1_1890	SSF88723	PIN domain-like
Rpdx1_1891	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Rpdx1_1891	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Rpdx1_1891	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Rpdx1_1892	SSF111369	HlyD-like secretion proteins
Rpdx1_1894	SSF56935	Porins
Rpdx1_1895	SSF51197	Clavaminate synthase-like
Rpdx1_1898	SSF74653	TolA/TonB C-terminal domain
Rpdx1_1900	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_1901	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_1902	SSF143975	IlvD/EDD N-terminal domain-like
Rpdx1_1902	SSF52016	LeuD/IlvD-like
Rpdx1_1903	SSF50331	MOP-like
Rpdx1_1903	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1904	SSF53850	Periplasmic binding protein-like II
Rpdx1_1905	SSF160964	MalF N-terminal region-like
Rpdx1_1905	SSF161098	MetI-like
Rpdx1_1906	SSF161098	MetI-like
Rpdx1_1907	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_1908	SSF53901	Thiolase-like
Rpdx1_1909	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_1910	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_1911	SSF89796	CoA-transferase family III (CaiB/BaiF)
Rpdx1_1913	SSF53901	Thiolase-like
Rpdx1_1914	SSF50249	Nucleic acid-binding proteins
Rpdx1_1917	SSF53850	Periplasmic binding protein-like II
Rpdx1_1918	SSF51230	Single hybrid motif
Rpdx1_1919	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1919	SSF55781	GAF domain-like
Rpdx1_1920	SSF52096	ClpP/crotonase
Rpdx1_1921	SSF103473	MFS general substrate transporter
Rpdx1_1922	SSF52096	ClpP/crotonase
Rpdx1_1923	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_1924	SSF46689	Homeodomain-like
Rpdx1_1924	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_1925	SSF53720	ALDH-like
Rpdx1_1927	SSF88723	PIN domain-like
Rpdx1_1928	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_1928	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_1929	SSF52096	ClpP/crotonase
Rpdx1_1930	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Rpdx1_1930	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_1931	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_1932	SSF52096	ClpP/crotonase
Rpdx1_1933	SSF75304	Amidase signature (AS) enzymes
Rpdx1_1934	SSF53187	Zn-dependent exopeptidases
Rpdx1_1934	SSF55031	Bacterial exopeptidase dimerisation domain
Rpdx1_1935	SSF140931	Fic-like
Rpdx1_1936	SSF140931	Fic-like
Rpdx1_1941	SSF52402	Adenine nucleotide alpha hydrolases-like
Rpdx1_1943	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_1943	SSF54373	FAD-linked reductases, C-terminal domain
Rpdx1_1946	SSF53474	alpha/beta-Hydrolases
Rpdx1_1947	SSF51161	Trimeric LpxA-like enzymes
Rpdx1_1951	SSF51161	Trimeric LpxA-like enzymes
Rpdx1_1955	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1961	SSF141371	PilZ domain-like
Rpdx1_1962	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1962	SSF51206	cAMP-binding domain-like
Rpdx1_1964	SSF144091	Rhomboid-like
Rpdx1_1965	SSF54631	CBS-domain pair
Rpdx1_1966	SSF46689	Homeodomain-like
Rpdx1_1966	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_1970	SSF52151	FabD/lysophospholipase-like
Rpdx1_1972	SSF141868	EAL domain-like
Rpdx1_1972	SSF55073	Nucleotide cyclase
Rpdx1_1972	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_1974	SSF55469	FMN-dependent nitroreductase-like
Rpdx1_1977	SSF52954	Class II aaRS ABD-related
Rpdx1_1977	SSF55186	ThrRS/AlaRS common domain
Rpdx1_1977	SSF55681	Class II aaRS and biotin synthetases
Rpdx1_1977	SSF81271	TGS-like
Rpdx1_1978	SSF103473	MFS general substrate transporter
Rpdx1_1980	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_1981	SSF46689	Homeodomain-like
Rpdx1_1985	SSF50249	Nucleic acid-binding proteins
Rpdx1_1989	SSF52096	ClpP/crotonase
Rpdx1_1990	SSF82649	SufE/NifU
Rpdx1_1991	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Rpdx1_1992	SSF141734	HisI-like
Rpdx1_1994	SSF53955	Lysozyme-like
Rpdx1_1995	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_1995	SSF53850	Periplasmic binding protein-like II
Rpdx1_1996	SSF56317	Carbon-nitrogen hydrolase
Rpdx1_1997	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_1998	SSF53850	Periplasmic binding protein-like II
Rpdx1_1999	SSF161098	MetI-like
Rpdx1_2001	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Rpdx1_2002	SSF52172	CheY-like
Rpdx1_2005	SSF111331	NAD kinase/diacylglycerol kinase-like
Rpdx1_2007	SSF56925	OMPA-like
Rpdx1_2012	SSF54975	Acylphosphatase/BLUF domain-like
Rpdx1_2017	SSF46689	Homeodomain-like
Rpdx1_2020	SSF55315	L30e-like
Rpdx1_2020	SSF75217	alpha/beta knot
Rpdx1_2029	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2031	SSF56300	Metallo-dependent phosphatases
Rpdx1_2032	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_2034	SSF53383	PLP-dependent transferases
Rpdx1_2037	SSF53448	Nucleotide-diphospho-sugar transferases
Rpdx1_2038	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_2040	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_2042	SSF51445	(Trans)glycosidases
Rpdx1_2044	SSF47336	ACP-like
Rpdx1_2044	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_2045	SSF47336	ACP-like
Rpdx1_2045	SSF52151	FabD/lysophospholipase-like
Rpdx1_2045	SSF52777	CoA-dependent acyltransferases
Rpdx1_2045	SSF53383	PLP-dependent transferases
Rpdx1_2045	SSF53901	Thiolase-like
Rpdx1_2045	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
Rpdx1_2045	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_2046	SSF52777	CoA-dependent acyltransferases
Rpdx1_2046	SSF53474	alpha/beta-Hydrolases
Rpdx1_2047	SSF53474	alpha/beta-Hydrolases
Rpdx1_2048	SSF56214	4'-phosphopantetheinyl transferase
Rpdx1_2057	SSF47413	lambda repressor-like DNA-binding domains
Rpdx1_2062	SSF51182	RmlC-like cupins
Rpdx1_2062	SSF53448	Nucleotide-diphospho-sugar transferases
Rpdx1_2063	SSF53738	Phosphoglucomutase, first 3 domains
Rpdx1_2063	SSF55957	Phosphoglucomutase, C-terminal domain
Rpdx1_2066	SSF50156	PDZ domain-like
Rpdx1_2066	SSF50494	Trypsin-like serine proteases
Rpdx1_2068	SSF54001	Cysteine proteinases
Rpdx1_2069	SSF51011	Glycosyl hydrolase domain
Rpdx1_2069	SSF51445	(Trans)glycosidases
Rpdx1_2069	SSF81296	E set domains
Rpdx1_2071	SSF47240	Ferritin-like
Rpdx1_2073	SSF140990	FtsH protease domain-like
Rpdx1_2073	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2075	SSF47413	lambda repressor-like DNA-binding domains
Rpdx1_2076	SSF47413	lambda repressor-like DNA-binding domains
Rpdx1_2078	SSF48452	TPR-like
Rpdx1_2080	SSF51156	Insect cysteine-rich antifreeze protein
Rpdx1_2081	SSF51120	beta-Roll
Rpdx1_2082	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2082	SSF90123	ABC transporter transmembrane region
Rpdx1_2085	SSF46894	C-terminal effector domain of the bipartite response regulators
Rpdx1_2085	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
Rpdx1_2086	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_2089	SSF50199	Staphylococcal nuclease
Rpdx1_2091	SSF52172	CheY-like
Rpdx1_2091	SSF53167	Purine and uridine phosphorylases
Rpdx1_2092	SSF52172	CheY-like
Rpdx1_2094	SSF46689	Homeodomain-like
Rpdx1_2095	SSF53098	Ribonuclease H-like
Rpdx1_2098	SSF53474	alpha/beta-Hydrolases
Rpdx1_2112	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Rpdx1_2114	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2116	SSF69572	Activating enzymes of the ubiquitin-like proteins
Rpdx1_2119	SSF52129	Caspase-like
Rpdx1_2119	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2120	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2121	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_2121	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_2122	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_2123	SSF53448	Nucleotide-diphospho-sugar transferases
Rpdx1_2124	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_2125	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_2126	SSF47336	ACP-like
Rpdx1_2126	SSF56784	HAD-like
Rpdx1_2127	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_2128	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_2129	SSF69318	Integrin alpha N-terminal domain
Rpdx1_2131	SSF56349	DNA breaking-rejoining enzymes
Rpdx1_2132	SSF56219	DNase I-like
Rpdx1_2133	SSF52096	ClpP/crotonase
Rpdx1_2134	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_2135	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_2136	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_2137	SSF53901	Thiolase-like
Rpdx1_2138	SSF46689	Homeodomain-like
Rpdx1_2138	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_2139	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_2140	SSF53474	alpha/beta-Hydrolases
Rpdx1_2141	SSF53822	Periplasmic binding protein-like I
Rpdx1_2144	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2145	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2147	SSF46689	Homeodomain-like
Rpdx1_2147	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_2148	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_2148	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_2149	SSF56112	Protein kinase-like (PK-like)
Rpdx1_2150	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_2151	SSF53254	Phosphoglycerate mutase-like
Rpdx1_2152	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_2153	SSF56601	beta-lactamase/transpeptidase-like
Rpdx1_2154	SSF50447	Translation proteins
Rpdx1_2154	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Rpdx1_2154	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2157	SSF56935	Porins
Rpdx1_2159	SSF50104	Translation proteins SH3-like domain
Rpdx1_2159	SSF82679	N-utilization substance G protein NusG, N-terminal domain
Rpdx1_2160	SSF46906	Ribosomal protein L11, C-terminal domain
Rpdx1_2160	SSF54747	Ribosomal L11/L12e N-terminal domain
Rpdx1_2161	SSF56808	Ribosomal protein L1
Rpdx1_2162	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_2162	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Rpdx1_2163	SSF160369	Ribosomal protein L10-like
Rpdx1_2164	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Rpdx1_2164	SSF54736	ClpS-like
Rpdx1_2165	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
Rpdx1_2166	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
Rpdx1_2167	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_2167	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_2167	SSF54373	FAD-linked reductases, C-terminal domain
Rpdx1_2168	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2168	SSF90123	ABC transporter transmembrane region
Rpdx1_2169	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_2170	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Rpdx1_2171	SSF103473	MFS general substrate transporter
Rpdx1_2174	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_2175	SSF46689	Homeodomain-like
Rpdx1_2175	SSF51182	RmlC-like cupins
Rpdx1_2176	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_2178	SSF50249	Nucleic acid-binding proteins
Rpdx1_2179	SSF47973	Ribosomal protein S7
Rpdx1_2180	SSF50447	Translation proteins
Rpdx1_2180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2180	SSF54211	Ribosomal protein S5 domain 2-like
Rpdx1_2180	SSF54980	EF-G C-terminal domain-like
Rpdx1_2181	SSF50447	Translation proteins
Rpdx1_2181	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Rpdx1_2181	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2182	SSF54999	Ribosomal protein S10
Rpdx1_2183	SSF50447	Translation proteins
Rpdx1_2184	SSF52166	Ribosomal protein L4
Rpdx1_2185	SSF54189	Ribosomal proteins S24e, L23 and L15e
Rpdx1_2186	SSF50104	Translation proteins SH3-like domain
Rpdx1_2186	SSF50249	Nucleic acid-binding proteins
Rpdx1_2187	SSF54570	Ribosomal protein S19
Rpdx1_2188	SSF54843	Ribosomal protein L22
Rpdx1_2189	SSF54814	Prokaryotic type KH domain (KH-domain type II)
Rpdx1_2189	SSF54821	Ribosomal protein S3 C-terminal domain
Rpdx1_2190	SSF54686	Ribosomal protein L16p/L10e
Rpdx1_2191	SSF46561	Ribosomal protein L29 (L29p)
Rpdx1_2192	SSF50249	Nucleic acid-binding proteins
Rpdx1_2193	SSF50193	Ribosomal protein L14
Rpdx1_2194	SSF50104	Translation proteins SH3-like domain
Rpdx1_2195	SSF55282	RL5-like
Rpdx1_2196	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Rpdx1_2197	SSF56047	Ribosomal protein S8
Rpdx1_2198	SSF56053	Ribosomal protein L6
Rpdx1_2199	SSF53137	Translational machinery components
Rpdx1_2200	SSF54211	Ribosomal protein S5 domain 2-like
Rpdx1_2200	SSF54768	dsRNA-binding domain-like
Rpdx1_2201	SSF55129	Ribosomal protein L30p/L7e
Rpdx1_2202	SSF52080	Ribosomal proteins L15p and L18e
Rpdx1_2203	SSF103491	Preprotein translocase SecY subunit
Rpdx1_2204	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2205	SSF46946	S13-like H2TH domain
Rpdx1_2206	SSF53137	Translational machinery components
Rpdx1_2207	SSF47789	C-terminal domain of RNA polymerase alpha subunit
Rpdx1_2207	SSF55257	RBP11-like subunits of RNA polymerase
Rpdx1_2207	SSF56553	Insert subdomain of RNA polymerase alpha subunit
Rpdx1_2208	SSF64263	Prokaryotic ribosomal protein L17
Rpdx1_2209	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_2210	SSF50129	GroES-like
Rpdx1_2210	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_2211	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_2212	SSF50156	PDZ domain-like
Rpdx1_2212	SSF50494	Trypsin-like serine proteases
Rpdx1_2214	SSF48019	post-AAA+ oligomerization domain-like
Rpdx1_2214	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2215	SSF141868	EAL domain-like
Rpdx1_2215	SSF55073	Nucleotide cyclase
Rpdx1_2216	SSF111038	YjbQ-like
Rpdx1_2217	SSF53822	Periplasmic binding protein-like I
Rpdx1_2218	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_2218	SSF52172	CheY-like
Rpdx1_2218	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_2218	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_2219	SSF55469	FMN-dependent nitroreductase-like
Rpdx1_2220	SSF48452	TPR-like
Rpdx1_2220	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2221	SSF55120	Pseudouridine synthase
Rpdx1_2221	SSF55174	Alpha-L RNA-binding motif
Rpdx1_2223	SSF160909	ATP12-like
Rpdx1_2225	SSF160544	EscU C-terminal domain-like
Rpdx1_2227	SSF52096	ClpP/crotonase
Rpdx1_2228	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_2229	SSF53474	alpha/beta-Hydrolases
Rpdx1_2231	SSF56112	Protein kinase-like (PK-like)
Rpdx1_2231	SSF81606	PP2C-like
Rpdx1_2236	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Rpdx1_2236	SSF52922	TK C-terminal domain-like
Rpdx1_2236	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
Rpdx1_2237	SSF53901	Thiolase-like
Rpdx1_2238	SSF50249	Nucleic acid-binding proteins
Rpdx1_2239	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_2240	SSF51569	Aldolase
Rpdx1_2241	SSF55811	Nudix
Rpdx1_2242	SSF46626	Cytochrome c
Rpdx1_2242	SSF50998	Quinoprotein alcohol dehydrogenase-like
Rpdx1_2243	SSF158472	HAMP domain-like
Rpdx1_2243	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_2243	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_2245	SSF158472	HAMP domain-like
Rpdx1_2245	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_2247	SSF103481	Multidrug resistance efflux transporter EmrE
Rpdx1_2249	SSF48173	Cryptochrome/photolyase FAD-binding domain
Rpdx1_2249	SSF52425	Cryptochrome/photolyase, N-terminal domain
Rpdx1_2252	SSF51230	Single hybrid motif
Rpdx1_2252	SSF51246	Rudiment single hybrid motif
Rpdx1_2252	SSF52440	PreATP-grasp domain
Rpdx1_2252	SSF56059	Glutathione synthetase ATP-binding domain-like
Rpdx1_2253	SSF51621	Phosphoenolpyruvate/pyruvate domain
Rpdx1_2254	SSF54975	Acylphosphatase/BLUF domain-like
Rpdx1_2255	SSF141868	EAL domain-like
Rpdx1_2255	SSF55073	Nucleotide cyclase
Rpdx1_2255	SSF55781	GAF domain-like
Rpdx1_2255	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_2256	SSF55681	Class II aaRS and biotin synthetases
Rpdx1_2257	SSF101801	Surface presentation of antigens (SPOA)
Rpdx1_2260	SSF88713	Glycoside hydrolase/deacetylase
Rpdx1_2261	SSF88713	Glycoside hydrolase/deacetylase
Rpdx1_2262	SSF158791	MgtE N-terminal domain-like
Rpdx1_2262	SSF161093	MgtE membrane domain-like
Rpdx1_2262	SSF54631	CBS-domain pair
Rpdx1_2263	SSF51430	NAD(P)-linked oxidoreductase
Rpdx1_2265	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_2266	SSF47616	GST C-terminal domain-like
Rpdx1_2266	SSF52833	Thioredoxin-like
Rpdx1_2270	SSF52374	Nucleotidylyl transferase
Rpdx1_2271	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2272	SSF53474	alpha/beta-Hydrolases
Rpdx1_2273	SSF53300	vWA-like
Rpdx1_2274	SSF46565	Chaperone J-domain
Rpdx1_2275	SSF56601	beta-lactamase/transpeptidase-like
Rpdx1_2276	SSF53300	vWA-like
Rpdx1_2277	SSF54736	ClpS-like
Rpdx1_2278	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2278	SSF81923	Double Clp-N motif
Rpdx1_2281	SSF53955	Lysozyme-like
Rpdx1_2284	SSF118196	YaeB-like
Rpdx1_2286	SSF54197	HIT-like
Rpdx1_2287	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_2288	SSF51695	PLC-like phosphodiesterases
Rpdx1_2289	SSF55298	YjgF-like
Rpdx1_2291	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
Rpdx1_2291	SSF56672	DNA/RNA polymerases
Rpdx1_2293	SSF52172	CheY-like
Rpdx1_2294	SSF52172	CheY-like
Rpdx1_2294	SSF55073	Nucleotide cyclase
Rpdx1_2296	SSF47413	lambda repressor-like DNA-binding domains
Rpdx1_2297	SSF57829	Zn-binding ribosomal proteins
Rpdx1_2298	SSF103473	MFS general substrate transporter
Rpdx1_2299	SSF55811	Nudix
Rpdx1_2301	SSF50249	Nucleic acid-binding proteins
Rpdx1_2302	SSF56712	Prokaryotic type I DNA topoisomerase
Rpdx1_2302	SSF57783	Zinc beta-ribbon
Rpdx1_2304	SSF102405	MCP/YpsA-like
Rpdx1_2306	SSF51338	Composite domain of metallo-dependent hydrolases
Rpdx1_2306	SSF51556	Metallo-dependent hydrolases
Rpdx1_2307	SSF53671	Aspartate/ornithine carbamoyltransferase
Rpdx1_2308	SSF52467	DHS-like NAD/FAD-binding domain
Rpdx1_2308	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Rpdx1_2309	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_2309	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_2310	SSF54427	NTF2-like
Rpdx1_2311	SSF53098	Ribonuclease H-like
Rpdx1_2312	SSF102198	Putative cyclase
Rpdx1_2313	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
Rpdx1_2314	SSF141000	Glu-tRNAGln amidotransferase C subunit
Rpdx1_2318	SSF75304	Amidase signature (AS) enzymes
Rpdx1_2319	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_2319	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_2320	SSF52151	FabD/lysophospholipase-like
Rpdx1_2321	SSF55931	Glutamine synthetase/guanido kinase
Rpdx1_2321	SSF89095	GatB/YqeY motif
Rpdx1_2323	SSF81901	HCP-like
Rpdx1_2324	SSF53850	Periplasmic binding protein-like II
Rpdx1_2326	SSF51621	Phosphoenolpyruvate/pyruvate domain
Rpdx1_2329	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2330	SSF103473	MFS general substrate transporter
Rpdx1_2331	SSF103515	Autotransporter
Rpdx1_2331	SSF81296	E set domains
Rpdx1_2332	SSF88874	Receptor-binding domain of short tail fibre protein gp12
Rpdx1_2334	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_2335	SSF53822	Periplasmic binding protein-like I
Rpdx1_2336	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_2337	SSF53271	PRTase-like
Rpdx1_2337	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Rpdx1_2339	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2339	SSF54211	Ribosomal protein S5 domain 2-like
Rpdx1_2340	SSF53146	Nitrogenase accessory factor-like
Rpdx1_2342	SSF50621	Alanine racemase C-terminal domain-like
Rpdx1_2342	SSF51419	PLP-binding barrel
Rpdx1_2343	SSF48024	N-terminal domain of DnaB helicase
Rpdx1_2343	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2344	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_2345	SSF46626	Cytochrome c
Rpdx1_2346	SSF46689	Homeodomain-like
Rpdx1_2346	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_2347	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_2348	SSF55653	Ribosomal protein L9 C-domain
Rpdx1_2348	SSF55658	L9 N-domain-like
Rpdx1_2350	SSF46911	Ribosomal protein S18
Rpdx1_2351	SSF54995	Ribosomal protein S6
Rpdx1_2352	SSF52151	FabD/lysophospholipase-like
Rpdx1_2352	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
Rpdx1_2353	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_2354	SSF47336	ACP-like
Rpdx1_2355	SSF53901	Thiolase-like
Rpdx1_2358	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2360	SSF50129	GroES-like
Rpdx1_2360	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_2361	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_2362	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Rpdx1_2363	SSF109998	Triger factor/SurA peptide-binding domain-like
Rpdx1_2367	SSF52949	Macro domain-like
Rpdx1_2367	SSF53187	Zn-dependent exopeptidases
Rpdx1_2368	SSF102400	DNA polymerase III chi subunit
Rpdx1_2370	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2371	SSF54919	Nucleoside diphosphate kinase, NDK
Rpdx1_2373	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_2373	SSF51206	cAMP-binding domain-like
Rpdx1_2374	SSF50249	Nucleic acid-binding proteins
Rpdx1_2375	SSF53328	Formyltransferase
Rpdx1_2376	SSF55326	PurM N-terminal domain-like
Rpdx1_2376	SSF56042	PurM C-terminal domain-like
Rpdx1_2378	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2379	SSF140356	PPK N-terminal domain-like
Rpdx1_2379	SSF143724	PHP14-like
Rpdx1_2379	SSF56024	Phospholipase D/nuclease
Rpdx1_2380	SSF109604	HD-domain/PDEase-like
Rpdx1_2380	SSF53067	Actin-like ATPase domain
Rpdx1_2382	SSF47819	HRDC-like
Rpdx1_2382	SSF53098	Ribonuclease H-like
Rpdx1_2384	SSF50249	Nucleic acid-binding proteins
Rpdx1_2384	SSF55261	GAD domain-like
Rpdx1_2384	SSF55681	Class II aaRS and biotin synthetases
Rpdx1_2385	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_2385	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Rpdx1_2385	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Rpdx1_2387	SSF53597	Dihydrofolate reductase-like
Rpdx1_2388	SSF88713	Glycoside hydrolase/deacetylase
Rpdx1_2389	SSF141523	L,D-transpeptidase catalytic domain-like
Rpdx1_2394	SSF53187	Zn-dependent exopeptidases
Rpdx1_2394	SSF55031	Bacterial exopeptidase dimerisation domain
Rpdx1_2395	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_2396	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_2399	SSF81901	HCP-like
Rpdx1_2404	SSF55073	Nucleotide cyclase
Rpdx1_2405	SSF46689	Homeodomain-like
Rpdx1_2405	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_2406	SSF111369	HlyD-like secretion proteins
Rpdx1_2407	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Rpdx1_2407	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Rpdx1_2407	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Rpdx1_2408	SSF55931	Glutamine synthetase/guanido kinase
Rpdx1_2409	SSF52402	Adenine nucleotide alpha hydrolases-like
Rpdx1_2409	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Rpdx1_2410	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Rpdx1_2411	SSF52402	Adenine nucleotide alpha hydrolases-like
Rpdx1_2418	SSF53807	"Helical backbone" metal receptor
Rpdx1_2419	SSF53807	"Helical backbone" metal receptor
Rpdx1_2420	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2421	SSF56935	Porins
Rpdx1_2422	SSF53807	"Helical backbone" metal receptor
Rpdx1_2423	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Rpdx1_2424	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2425	SSF52317	Class I glutamine amidotransferase-like
Rpdx1_2426	SSF52317	Class I glutamine amidotransferase-like
Rpdx1_2429	SSF47175	Cytochromes
Rpdx1_2430	SSF81342	Transmembrane di-heme cytochromes
Rpdx1_2431	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_2433	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_2437	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2437	SSF90123	ABC transporter transmembrane region
Rpdx1_2438	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2438	SSF90123	ABC transporter transmembrane region
Rpdx1_2439	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_2439	SSF53850	Periplasmic binding protein-like II
Rpdx1_2440	SSF53383	PLP-dependent transferases
Rpdx1_2441	SSF53720	ALDH-like
Rpdx1_2442	SSF53187	Zn-dependent exopeptidases
Rpdx1_2442	SSF55031	Bacterial exopeptidase dimerisation domain
Rpdx1_2443	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Rpdx1_2444	SSF53850	Periplasmic binding protein-like II
Rpdx1_2445	SSF161098	MetI-like
Rpdx1_2446	SSF161098	MetI-like
Rpdx1_2447	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2448	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Rpdx1_2450	SSF50129	GroES-like
Rpdx1_2450	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_2452	SSF53850	Periplasmic binding protein-like II
Rpdx1_2453	SSF161098	MetI-like
Rpdx1_2454	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2455	SSF53474	alpha/beta-Hydrolases
Rpdx1_2456	SSF55331	Tautomerase/MIF
Rpdx1_2457	SSF55073	Nucleotide cyclase
Rpdx1_2458	SSF51161	Trimeric LpxA-like enzymes
Rpdx1_2459	SSF46689	Homeodomain-like
Rpdx1_2460	SSF53098	Ribonuclease H-like
Rpdx1_2461	SSF52200	Toll/Interleukin receptor TIR domain
Rpdx1_2462	SSF52206	Hypothetical protein MTH538
Rpdx1_2464	SSF51998	PFL-like glycyl radical enzymes
Rpdx1_2464	SSF75625	YebC-like
Rpdx1_2465	SSF103481	Multidrug resistance efflux transporter EmrE
Rpdx1_2466	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_2466	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Rpdx1_2467	SSF75304	Amidase signature (AS) enzymes
Rpdx1_2469	SSF53383	PLP-dependent transferases
Rpdx1_2470	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2471	SSF53383	PLP-dependent transferases
Rpdx1_2472	SSF58113	Apolipoprotein A-I
Rpdx1_2473	SSF46689	Homeodomain-like
Rpdx1_2473	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_2474	SSF54368	Glutamine synthetase, N-terminal domain
Rpdx1_2474	SSF55931	Glutamine synthetase/guanido kinase
Rpdx1_2475	SSF54913	GlnB-like
Rpdx1_2476	SSF53613	Ribokinase-like
Rpdx1_2476	SSF64153	YjeF N-terminal domain-like
Rpdx1_2477	SSF49503	Cupredoxins
Rpdx1_2478	SSF102735	Trigger factor ribosome-binding domain
Rpdx1_2478	SSF109998	Triger factor/SurA peptide-binding domain-like
Rpdx1_2478	SSF54534	FKBP-like
Rpdx1_2479	SSF52096	ClpP/crotonase
Rpdx1_2480	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2480	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Rpdx1_2481	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2481	SSF54211	Ribosomal protein S5 domain 2-like
Rpdx1_2481	SSF88697	PUA domain-like
Rpdx1_2482	SSF141868	EAL domain-like
Rpdx1_2482	SSF55073	Nucleotide cyclase
Rpdx1_2482	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_2483	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Rpdx1_2483	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Rpdx1_2483	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Rpdx1_2484	SSF111369	HlyD-like secretion proteins
Rpdx1_2485	SSF53187	Zn-dependent exopeptidases
Rpdx1_2485	SSF55031	Bacterial exopeptidase dimerisation domain
Rpdx1_2486	SSF47729	IHF-like DNA-binding proteins
Rpdx1_2488	SSF56349	DNA breaking-rejoining enzymes
Rpdx1_2495	SSF47413	lambda repressor-like DNA-binding domains
Rpdx1_2500	SSF47413	lambda repressor-like DNA-binding domains
Rpdx1_2501	SSF47413	lambda repressor-like DNA-binding domains
Rpdx1_2511	SSF82679	N-utilization substance G protein NusG, N-terminal domain
Rpdx1_2512	SSF47823	lambda integrase-like, N-terminal domain
Rpdx1_2512	SSF56349	DNA breaking-rejoining enzymes
Rpdx1_2529	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_2533	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_2534	SSF88874	Receptor-binding domain of short tail fibre protein gp12
Rpdx1_2537	SSF53955	Lysozyme-like
Rpdx1_2552	SSF56770	HydA/Nqo6-like
Rpdx1_2553	SSF143243	Nqo5-like
Rpdx1_2554	SSF56762	HydB/Nqo4-like
Rpdx1_2555	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_2556	SSF52833	Thioredoxin-like
Rpdx1_2558	SSF140490	Nqo1C-terminal domain-like
Rpdx1_2558	SSF142019	Nqo1 FMN-binding domain-like
Rpdx1_2558	SSF142984	Nqo1 middle domain-like
Rpdx1_2559	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Rpdx1_2559	SSF54292	2Fe-2S ferredoxin-like
Rpdx1_2559	SSF54862	4Fe-4S ferredoxins
Rpdx1_2561	SSF54862	4Fe-4S ferredoxins
Rpdx1_2567	SSF50037	C-terminal domain of transcriptional repressors
Rpdx1_2567	SSF55681	Class II aaRS and biotin synthetases
Rpdx1_2568	SSF56281	Metallo-hydrolase/oxidoreductase
Rpdx1_2569	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Rpdx1_2572	SSF110087	DR1885-like metal-binding protein
Rpdx1_2574	SSF81296	E set domains
Rpdx1_2575	SSF52954	Class II aaRS ABD-related
Rpdx1_2575	SSF55681	Class II aaRS and biotin synthetases
Rpdx1_2577	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2581	SSF160975	AF1531-like
Rpdx1_2581	SSF89550	PHP domain-like
Rpdx1_2582	SSF52129	Caspase-like
Rpdx1_2583	SSF52313	Ribosomal protein S2
Rpdx1_2584	SSF46934	UBA-like
Rpdx1_2584	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
Rpdx1_2585	SSF53633	Carbamate kinase-like
Rpdx1_2586	SSF55194	Ribosome recycling factor, RRF
Rpdx1_2587	SSF64005	Undecaprenyl diphosphate synthase
Rpdx1_2589	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_2589	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Rpdx1_2589	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
Rpdx1_2590	SSF50156	PDZ domain-like
Rpdx1_2592	SSF51161	Trimeric LpxA-like enzymes
Rpdx1_2593	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_2594	SSF51161	Trimeric LpxA-like enzymes
Rpdx1_2596	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_2597	SSF48256	Citrate synthase
Rpdx1_2598	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
Rpdx1_2598	SSF52374	Nucleotidylyl transferase
Rpdx1_2599	SSF50715	Ribosomal protein L25-like
Rpdx1_2599	SSF52374	Nucleotidylyl transferase
Rpdx1_2601	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_2601	SSF51306	LexA/Signal peptidase
Rpdx1_2602	SSF53218	Molybdenum cofactor biosynthesis proteins
Rpdx1_2602	SSF63867	MoeA C-terminal domain-like
Rpdx1_2602	SSF63882	MoeA N-terminal region -like
Rpdx1_2604	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_2605	SSF56784	HAD-like
Rpdx1_2606	SSF103088	OmpA-like
Rpdx1_2607	SSF141371	PilZ domain-like
Rpdx1_2608	SSF49764	HSP20-like chaperones
Rpdx1_2610	SSF56784	HAD-like
Rpdx1_2610	SSF81653	Calcium ATPase, transduction domain A
Rpdx1_2610	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
Rpdx1_2610	SSF81665	Calcium ATPase, transmembrane domain M
Rpdx1_2611	SSF55040	Molybdenum cofactor biosynthesis protein C, MoaC
Rpdx1_2612	SSF51366	Ribulose-phoshate binding barrel
Rpdx1_2614	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Rpdx1_2614	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Rpdx1_2615	SSF109998	Triger factor/SurA peptide-binding domain-like
Rpdx1_2615	SSF54534	FKBP-like
Rpdx1_2616	SSF51351	Triosephosphate isomerase (TIM)
Rpdx1_2618	SSF52317	Class I glutamine amidotransferase-like
Rpdx1_2618	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2623	SSF54909	Dimeric alpha+beta barrel
Rpdx1_2624	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Rpdx1_2625	SSF51569	Aldolase
Rpdx1_2626	SSF53448	Nucleotide-diphospho-sugar transferases
Rpdx1_2627	SSF74650	Galactose mutarotase-like
Rpdx1_2627	SSF81296	E set domains
Rpdx1_2628	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Rpdx1_2629	SSF51604	Enolase C-terminal domain-like
Rpdx1_2629	SSF54826	Enolase N-terminal domain-like
Rpdx1_2630	SSF50129	GroES-like
Rpdx1_2630	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_2633	SSF89796	CoA-transferase family III (CaiB/BaiF)
Rpdx1_2634	SSF52218	Flavoproteins
Rpdx1_2636	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Rpdx1_2637	SSF51230	Single hybrid motif
Rpdx1_2637	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Rpdx1_2637	SSF52922	TK C-terminal domain-like
Rpdx1_2639	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
Rpdx1_2639	SSF51230	Single hybrid motif
Rpdx1_2639	SSF52777	CoA-dependent acyltransferases
Rpdx1_2640	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_2640	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Rpdx1_2641	SSF81901	HCP-like
Rpdx1_2642	SSF56219	DNase I-like
Rpdx1_2643	SSF47413	lambda repressor-like DNA-binding domains
Rpdx1_2646	SSF63712	Nicotinic receptor ligand binding domain-like
Rpdx1_2647	SSF103190	Sensory domain-like
Rpdx1_2648	SSF89360	HesB-like domain
Rpdx1_2649	SSF109604	HD-domain/PDEase-like
Rpdx1_2650	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Rpdx1_2650	SSF52374	Nucleotidylyl transferase
Rpdx1_2650	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
Rpdx1_2651	SSF110997	Sporulation related repeat
Rpdx1_2652	SSF51445	(Trans)glycosidases
Rpdx1_2654	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_2658	SSF103515	Autotransporter
Rpdx1_2658	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
Rpdx1_2658	SSF51126	Pectin lyase-like
Rpdx1_2659	SSF46589	tRNA-binding arm
Rpdx1_2659	SSF55681	Class II aaRS and biotin synthetases
Rpdx1_2660	SSF53927	Cytidine deaminase-like
Rpdx1_2661	SSF55797	PR-1-like
Rpdx1_2662	SSF64167	SurE-like
Rpdx1_2663	SSF52172	CheY-like
Rpdx1_2664	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_2665	SSF51261	Duplicated hybrid motif
Rpdx1_2665	SSF54106	LysM domain
Rpdx1_2666	SSF56925	OMPA-like
Rpdx1_2666	SSF69917	OMPT-like
Rpdx1_2667	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2669	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Rpdx1_2670	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Rpdx1_2671	SSF64076	MTH938-like
Rpdx1_2672	SSF48576	Terpenoid synthases
Rpdx1_2673	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_2676	SSF158634	RPA2825-like
Rpdx1_2677	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_2678	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_2680	SSF81324	Voltage-gated potassium channels
Rpdx1_2681	SSF46689	Homeodomain-like
Rpdx1_2684	SSF46689	Homeodomain-like
Rpdx1_2688	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2689	SSF56925	OMPA-like
Rpdx1_2690	SSF50249	Nucleic acid-binding proteins
Rpdx1_2692	SSF54631	CBS-domain pair
Rpdx1_2692	SSF56176	FAD-binding/transporter-associated domain-like
Rpdx1_2693	SSF101386	all-alpha NTP pyrophosphatases
Rpdx1_2694	SSF52402	Adenine nucleotide alpha hydrolases-like
Rpdx1_2695	SSF56601	beta-lactamase/transpeptidase-like
Rpdx1_2696	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_2697	SSF50090	Electron transport accessory proteins
Rpdx1_2698	SSF50090	Electron transport accessory proteins
Rpdx1_2699	SSF56209	Nitrile hydratase alpha chain
Rpdx1_2700	SSF52096	ClpP/crotonase
Rpdx1_2701	SSF54909	Dimeric alpha+beta barrel
Rpdx1_2702	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2705	SSF53613	Ribokinase-like
Rpdx1_2707	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_2707	SSF53383	PLP-dependent transferases
Rpdx1_2708	SSF53383	PLP-dependent transferases
Rpdx1_2709	SSF51419	PLP-binding barrel
Rpdx1_2716	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2717	SSF56300	Metallo-dependent phosphatases
Rpdx1_2719	SSF52218	Flavoproteins
Rpdx1_2722	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_2723	SSF56281	Metallo-hydrolase/oxidoreductase
Rpdx1_2724	SSF51556	Metallo-dependent hydrolases
Rpdx1_2725	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Rpdx1_2725	SSF52374	Nucleotidylyl transferase
Rpdx1_2726	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2727	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2728	SSF56601	beta-lactamase/transpeptidase-like
Rpdx1_2728	SSF69189	Penicillin-binding protein associated domain
Rpdx1_2729	SSF53474	alpha/beta-Hydrolases
Rpdx1_2730	SSF50685	Barwin-like endoglucanases
Rpdx1_2732	SSF54909	Dimeric alpha+beta barrel
Rpdx1_2733	SSF55073	Nucleotide cyclase
Rpdx1_2735	SSF54211	Ribosomal protein S5 domain 2-like
Rpdx1_2736	SSF52161	Ribosomal protein L13
Rpdx1_2737	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_2738	SSF52096	ClpP/crotonase
Rpdx1_2739	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_2740	SSF53383	PLP-dependent transferases
Rpdx1_2743	SSF50129	GroES-like
Rpdx1_2743	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_2744	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_2745	SSF52467	DHS-like NAD/FAD-binding domain
Rpdx1_2745	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Rpdx1_2746	SSF46689	Homeodomain-like
Rpdx1_2746	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_2750	SSF47240	Ferritin-like
Rpdx1_2751	SSF46626	Cytochrome c
Rpdx1_2752	SSF48695	Multiheme cytochromes
Rpdx1_2753	SSF88713	Glycoside hydrolase/deacetylase
Rpdx1_2754	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_2755	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2756	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_2757	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_2761	SSF46955	Putative DNA-binding domain
Rpdx1_2762	SSF47729	IHF-like DNA-binding proteins
Rpdx1_2763	SSF53901	Thiolase-like
Rpdx1_2764	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Rpdx1_2768	SSF53474	alpha/beta-Hydrolases
Rpdx1_2773	SSF55326	PurM N-terminal domain-like
Rpdx1_2773	SSF56042	PurM C-terminal domain-like
Rpdx1_2774	SSF48013	NusB-like
Rpdx1_2775	SSF52121	Lumazine synthase
Rpdx1_2776	SSF63380	Riboflavin synthase domain-like
Rpdx1_2777	SSF53597	Dihydrofolate reductase-like
Rpdx1_2777	SSF53927	Cytidine deaminase-like
Rpdx1_2779	SSF53383	PLP-dependent transferases
Rpdx1_2781	SSF88723	PIN domain-like
Rpdx1_2782	SSF51182	RmlC-like cupins
Rpdx1_2784	SSF47616	GST C-terminal domain-like
Rpdx1_2784	SSF52833	Thioredoxin-like
Rpdx1_2785	SSF46458	Globin-like
Rpdx1_2789	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_2790	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_2792	SSF51569	Aldolase
Rpdx1_2794	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_2795	SSF111369	HlyD-like secretion proteins
Rpdx1_2798	SSF46689	Homeodomain-like
Rpdx1_2798	SSF51182	RmlC-like cupins
Rpdx1_2802	SSF101904	GyrA/ParC C-terminal domain-like
Rpdx1_2802	SSF56719	Type II DNA topoisomerase
Rpdx1_2803	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_2804	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_2805	SSF46689	Homeodomain-like
Rpdx1_2805	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_2806	SSF47616	GST C-terminal domain-like
Rpdx1_2806	SSF52833	Thioredoxin-like
Rpdx1_2807	SSF50249	Nucleic acid-binding proteins
Rpdx1_2807	SSF57863	ArfGap/RecO-like zinc finger
Rpdx1_2809	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2809	SSF54814	Prokaryotic type KH domain (KH-domain type II)
Rpdx1_2810	SSF54768	dsRNA-binding domain-like
Rpdx1_2810	SSF69065	RNase III domain-like
Rpdx1_2811	SSF51306	LexA/Signal peptidase
Rpdx1_2812	SSF56214	4'-phosphopantetheinyl transferase
Rpdx1_2813	SSF63892	Pyridoxine 5'-phosphate synthase
Rpdx1_2814	SSF109604	HD-domain/PDEase-like
Rpdx1_2814	SSF55021	ACT-like
Rpdx1_2814	SSF81271	TGS-like
Rpdx1_2814	SSF81301	Nucleotidyltransferase
Rpdx1_2815	SSF63562	RPB6/omega subunit-like
Rpdx1_2817	SSF52141	Uracil-DNA glycosylase-like
Rpdx1_2818	SSF52833	Thioredoxin-like
Rpdx1_2819	SSF74982	Small protein B (SmpB)
Rpdx1_2820	SSF81330	Gated mechanosensitive channel
Rpdx1_2821	SSF51569	Aldolase
Rpdx1_2822	SSF51182	RmlC-like cupins
Rpdx1_2823	SSF89562	RraA-like
Rpdx1_2824	SSF160467	PH0987 N-terminal domain-like
Rpdx1_2824	SSF50891	Cyclophilin-like
Rpdx1_2825	SSF50891	Cyclophilin-like
Rpdx1_2826	SSF88713	Glycoside hydrolase/deacetylase
Rpdx1_2827	SSF53474	alpha/beta-Hydrolases
Rpdx1_2828	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2829	SSF161098	MetI-like
Rpdx1_2830	SSF53850	Periplasmic binding protein-like II
Rpdx1_2831	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_2831	SSF53850	Periplasmic binding protein-like II
Rpdx1_2832	SSF102114	Radical SAM enzymes
Rpdx1_2833	SSF50129	GroES-like
Rpdx1_2833	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_2836	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_2838	SSF141255	YccV-like
Rpdx1_2840	SSF53850	Periplasmic binding protein-like II
Rpdx1_2841	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_2843	SSF141259	CarD-like
Rpdx1_2843	SSF143517	TRCF domain-like
Rpdx1_2843	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2844	SSF109910	YgfY-like
Rpdx1_2845	SSF50249	Nucleic acid-binding proteins
Rpdx1_2845	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2847	SSF53697	SIS domain
Rpdx1_2847	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Rpdx1_2848	SSF51161	Trimeric LpxA-like enzymes
Rpdx1_2848	SSF53448	Nucleotide-diphospho-sugar transferases
Rpdx1_2851	SSF51445	(Trans)glycosidases
Rpdx1_2853	SSF51445	(Trans)glycosidases
Rpdx1_2853	SSF53448	Nucleotide-diphospho-sugar transferases
Rpdx1_2854	SSF56918	Light-harvesting complex subunits
Rpdx1_2855	SSF56918	Light-harvesting complex subunits
Rpdx1_2857	SSF55298	YjgF-like
Rpdx1_2858	SSF103481	Multidrug resistance efflux transporter EmrE
Rpdx1_2863	SSF54913	GlnB-like
Rpdx1_2864	SSF54913	GlnB-like
Rpdx1_2865	SSF51713	tRNA-guanine transglycosylase
Rpdx1_2866	SSF111337	QueA-like
Rpdx1_2867	SSF50891	Cyclophilin-like
Rpdx1_2869	SSF50891	Cyclophilin-like
Rpdx1_2870	SSF52374	Nucleotidylyl transferase
Rpdx1_2872	SSF101904	GyrA/ParC C-terminal domain-like
Rpdx1_2872	SSF56719	Type II DNA topoisomerase
Rpdx1_2873	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2874	SSF50182	Sm-like ribonucleoproteins
Rpdx1_2875	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
Rpdx1_2876	SSF46689	Homeodomain-like
Rpdx1_2876	SSF52172	CheY-like
Rpdx1_2876	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2877	SSF158472	HAMP domain-like
Rpdx1_2877	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_2877	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_2877	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_2878	SSF46689	Homeodomain-like
Rpdx1_2878	SSF52172	CheY-like
Rpdx1_2878	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2879	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_2879	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_2879	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_2880	SSF51395	FMN-linked oxidoreductases
Rpdx1_2881	SSF53448	Nucleotide-diphospho-sugar transferases
Rpdx1_2881	SSF69765	IpsF-like
Rpdx1_2882	SSF142433	CinA-like
Rpdx1_2883	SSF55961	Bet v1-like
Rpdx1_2884	SSF102114	Radical SAM enzymes
Rpdx1_2885	SSF50486	FMT C-terminal domain-like
Rpdx1_2887	SSF46589	tRNA-binding arm
Rpdx1_2887	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Rpdx1_2887	SSF50677	ValRS/IleRS/LeuRS editing domain
Rpdx1_2887	SSF52374	Nucleotidylyl transferase
Rpdx1_2889	SSF56954	Outer membrane efflux proteins (OEP)
Rpdx1_2890	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_2893	SSF52266	SGNH hydrolase
Rpdx1_2896	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Rpdx1_2896	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Rpdx1_2896	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Rpdx1_2897	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Rpdx1_2897	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Rpdx1_2897	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Rpdx1_2898	SSF111369	HlyD-like secretion proteins
Rpdx1_2899	SSF56954	Outer membrane efflux proteins (OEP)
Rpdx1_2900	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_2902	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_2903	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Rpdx1_2905	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2906	SSF161098	MetI-like
Rpdx1_2907	SSF161098	MetI-like
Rpdx1_2908	SSF53850	Periplasmic binding protein-like II
Rpdx1_2909	SSF53383	PLP-dependent transferases
Rpdx1_2911	SSF53448	Nucleotide-diphospho-sugar transferases
Rpdx1_2912	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
Rpdx1_2914	SSF53955	Lysozyme-like
Rpdx1_2914	SSF56601	beta-lactamase/transpeptidase-like
Rpdx1_2915	SSF48239	Terpenoid cyclases/Protein prenyltransferases
Rpdx1_2922	SSF54534	FKBP-like
Rpdx1_2925	SSF51569	Aldolase
Rpdx1_2926	SSF51230	Single hybrid motif
Rpdx1_2926	SSF51246	Rudiment single hybrid motif
Rpdx1_2926	SSF52440	PreATP-grasp domain
Rpdx1_2926	SSF56059	Glutathione synthetase ATP-binding domain-like
Rpdx1_2927	SSF52096	ClpP/crotonase
Rpdx1_2930	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_2931	SSF56349	DNA breaking-rejoining enzymes
Rpdx1_2932	SSF56349	DNA breaking-rejoining enzymes
Rpdx1_2935	SSF46689	Homeodomain-like
Rpdx1_2935	SSF53098	Ribonuclease H-like
Rpdx1_2941	SSF88874	Receptor-binding domain of short tail fibre protein gp12
Rpdx1_2960	SSF53955	Lysozyme-like
Rpdx1_2968	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Rpdx1_2975	SSF47807	5' to 3' exonuclease, C-terminal subdomain
Rpdx1_2975	SSF88723	PIN domain-like
Rpdx1_2978	SSF53098	Ribonuclease H-like
Rpdx1_2978	SSF56672	DNA/RNA polymerases
Rpdx1_2982	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_2982	SSF56731	DNA primase core
Rpdx1_2982	SSF57783	Zinc beta-ribbon
Rpdx1_2983	SSF54060	His-Me finger endonucleases
Rpdx1_2986	SSF141571	Pentapeptide repeat-like
Rpdx1_2988	SSF52980	Restriction endonuclease-like
Rpdx1_2989	SSF50249	Nucleic acid-binding proteins
Rpdx1_2992	SSF56672	DNA/RNA polymerases
Rpdx1_2994	SSF50249	Nucleic acid-binding proteins
Rpdx1_2995	SSF52467	DHS-like NAD/FAD-binding domain
Rpdx1_2996	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Rpdx1_2997	SSF141371	PilZ domain-like
Rpdx1_3001	SSF102114	Radical SAM enzymes
Rpdx1_3002	SSF55681	Class II aaRS and biotin synthetases
Rpdx1_3003	SSF50104	Translation proteins SH3-like domain
Rpdx1_3003	SSF50249	Nucleic acid-binding proteins
Rpdx1_3004	SSF111331	NAD kinase/diacylglycerol kinase-like
Rpdx1_3005	SSF47090	PGBD-like
Rpdx1_3005	SSF53955	Lysozyme-like
Rpdx1_3008	SSF64182	DHH phosphoesterases
Rpdx1_3009	SSF56784	HAD-like
Rpdx1_3010	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_3011	SSF56655	Carbohydrate phosphatase
Rpdx1_3012	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3012	SSF55021	ACT-like
Rpdx1_3012	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Rpdx1_3013	SSF53383	PLP-dependent transferases
Rpdx1_3015	SSF53474	alpha/beta-Hydrolases
Rpdx1_3016	SSF75304	Amidase signature (AS) enzymes
Rpdx1_3017	SSF53850	Periplasmic binding protein-like II
Rpdx1_3018	SSF161098	MetI-like
Rpdx1_3019	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3020	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_3020	SSF48008	GntR ligand-binding domain-like
Rpdx1_3022	SSF102114	Radical SAM enzymes
Rpdx1_3023	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_3024	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3024	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Rpdx1_3025	SSF50475	FMN-binding split barrel
Rpdx1_3027	SSF53474	alpha/beta-Hydrolases
Rpdx1_3028	SSF56281	Metallo-hydrolase/oxidoreductase
Rpdx1_3030	SSF54211	Ribosomal protein S5 domain 2-like
Rpdx1_3030	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_3030	SSF56719	Type II DNA topoisomerase
Rpdx1_3033	SSF52129	Caspase-like
Rpdx1_3034	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_3035	SSF46689	Homeodomain-like
Rpdx1_3036	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3037	SSF55073	Nucleotide cyclase
Rpdx1_3038	SSF159894	YgaC/TfoX-N like
Rpdx1_3039	SSF55298	YjgF-like
Rpdx1_3040	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_3042	SSF89360	HesB-like domain
Rpdx1_3043	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Rpdx1_3044	SSF117916	Fe-S cluster assembly (FSCA) domain-like
Rpdx1_3045	SSF53383	PLP-dependent transferases
Rpdx1_3046	SSF101960	Stabilizer of iron transporter SufD
Rpdx1_3047	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3048	SSF101960	Stabilizer of iron transporter SufD
Rpdx1_3049	SSF53383	PLP-dependent transferases
Rpdx1_3050	SSF53474	alpha/beta-Hydrolases
Rpdx1_3051	SSF53067	Actin-like ATPase domain
Rpdx1_3052	SSF52374	Nucleotidylyl transferase
Rpdx1_3052	SSF55174	Alpha-L RNA-binding motif
Rpdx1_3053	SSF103473	MFS general substrate transporter
Rpdx1_3054	SSF81342	Transmembrane di-heme cytochromes
Rpdx1_3056	SSF52833	Thioredoxin-like
Rpdx1_3057	SSF51261	Duplicated hybrid motif
Rpdx1_3059	SSF53955	Lysozyme-like
Rpdx1_3059	SSF56601	beta-lactamase/transpeptidase-like
Rpdx1_3060	SSF53187	Zn-dependent exopeptidases
Rpdx1_3061	SSF50249	Nucleic acid-binding proteins
Rpdx1_3062	SSF118215	Proton glutamate symport protein
Rpdx1_3064	SSF53383	PLP-dependent transferases
Rpdx1_3065	SSF48452	TPR-like
Rpdx1_3067	SSF52833	Thioredoxin-like
Rpdx1_3068	SSF52833	Thioredoxin-like
Rpdx1_3069	SSF46689	Homeodomain-like
Rpdx1_3069	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_3070	SSF161111	Cation efflux protein transmembrane domain-like
Rpdx1_3072	SSF52304	Type II 3-dehydroquinate dehydratase
Rpdx1_3073	SSF51230	Single hybrid motif
Rpdx1_3074	SSF51246	Rudiment single hybrid motif
Rpdx1_3074	SSF52440	PreATP-grasp domain
Rpdx1_3074	SSF56059	Glutathione synthetase ATP-binding domain-like
Rpdx1_3075	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_3075	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_3076	SSF52172	CheY-like
Rpdx1_3077	SSF52172	CheY-like
Rpdx1_3077	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_3078	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_3080	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_3082	SSF53474	alpha/beta-Hydrolases
Rpdx1_3083	SSF51445	(Trans)glycosidases
Rpdx1_3084	SSF46689	Homeodomain-like
Rpdx1_3084	SSF52317	Class I glutamine amidotransferase-like
Rpdx1_3085	SSF52317	Class I glutamine amidotransferase-like
Rpdx1_3089	SSF48435	Bacterial muramidases
Rpdx1_3089	SSF53955	Lysozyme-like
Rpdx1_3092	SSF161098	MetI-like
Rpdx1_3093	SSF53850	Periplasmic binding protein-like II
Rpdx1_3094	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3095	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3096	SSF56317	Carbon-nitrogen hydrolase
Rpdx1_3097	SSF141130	Acetamidase/Formamidase-like
Rpdx1_3098	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3099	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3102	SSF53822	Periplasmic binding protein-like I
Rpdx1_3103	SSF52172	CheY-like
Rpdx1_3104	SSF53822	Periplasmic binding protein-like I
Rpdx1_3107	SSF101478	ADP-ribosylglycohydrolase
Rpdx1_3109	SSF46689	Homeodomain-like
Rpdx1_3110	SSF109604	HD-domain/PDEase-like
Rpdx1_3110	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3117	SSF143430	TTP0101/SSO1404-like
Rpdx1_3118	SSF51998	PFL-like glycyl radical enzymes
Rpdx1_3120	SSF102114	Radical SAM enzymes
Rpdx1_3121	SSF46689	Homeodomain-like
Rpdx1_3121	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3121	SSF55781	GAF domain-like
Rpdx1_3122	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3123	SSF53807	"Helical backbone" metal receptor
Rpdx1_3125	SSF53807	"Helical backbone" metal receptor
Rpdx1_3127	SSF110857	Gamma-glutamyl cyclotransferase-like
Rpdx1_3128	SSF50475	FMN-binding split barrel
Rpdx1_3130	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_3131	SSF56954	Outer membrane efflux proteins (OEP)
Rpdx1_3132	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Rpdx1_3132	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Rpdx1_3132	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Rpdx1_3133	SSF111369	HlyD-like secretion proteins
Rpdx1_3135	SSF46894	C-terminal effector domain of the bipartite response regulators
Rpdx1_3135	SSF52172	CheY-like
Rpdx1_3136	SSF158472	HAMP domain-like
Rpdx1_3136	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_3136	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_3137	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_3137	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Rpdx1_3138	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_3138	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Rpdx1_3139	SSF46626	Cytochrome c
Rpdx1_3141	SSF46626	Cytochrome c
Rpdx1_3142	SSF56524	Oxidoreductase molybdopterin-binding domain
Rpdx1_3142	SSF81296	E set domains
Rpdx1_3143	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
Rpdx1_3143	SSF56300	Metallo-dependent phosphatases
Rpdx1_3144	SSF81296	E set domains
Rpdx1_3146	SSF46626	Cytochrome c
Rpdx1_3147	SSF46626	Cytochrome c
Rpdx1_3148	SSF143744	GlcG-like
Rpdx1_3149	SSF52833	Thioredoxin-like
Rpdx1_3151	SSF52833	Thioredoxin-like
Rpdx1_3152	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_3154	SSF75169	DsrEFH-like
Rpdx1_3156	SSF63380	Riboflavin synthase domain-like
Rpdx1_3157	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3158	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Rpdx1_3159	SSF53807	"Helical backbone" metal receptor
Rpdx1_3160	SSF53474	alpha/beta-Hydrolases
Rpdx1_3161	SSF56935	Porins
Rpdx1_3162	SSF56935	Porins
Rpdx1_3163	SSF46689	Homeodomain-like
Rpdx1_3165	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3166	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_3167	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3168	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3169	SSF161098	MetI-like
Rpdx1_3170	SSF161098	MetI-like
Rpdx1_3171	SSF53850	Periplasmic binding protein-like II
Rpdx1_3172	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_3173	SSF50129	GroES-like
Rpdx1_3173	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3174	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Rpdx1_3175	SSF53187	Zn-dependent exopeptidases
Rpdx1_3175	SSF55031	Bacterial exopeptidase dimerisation domain
Rpdx1_3176	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Rpdx1_3177	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_3177	SSF54909	Dimeric alpha+beta barrel
Rpdx1_3178	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_3180	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Rpdx1_3180	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Rpdx1_3183	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_3184	SSF47336	ACP-like
Rpdx1_3185	SSF51658	Xylose isomerase-like
Rpdx1_3186	SSF53807	"Helical backbone" metal receptor
Rpdx1_3187	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Rpdx1_3188	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Rpdx1_3189	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3191	SSF56935	Porins
Rpdx1_3192	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_3193	SSF56935	Porins
Rpdx1_3195	SSF52402	Adenine nucleotide alpha hydrolases-like
Rpdx1_3197	SSF56784	HAD-like
Rpdx1_3197	SSF81653	Calcium ATPase, transduction domain A
Rpdx1_3197	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
Rpdx1_3197	SSF81665	Calcium ATPase, transmembrane domain M
Rpdx1_3208	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Rpdx1_3208	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Rpdx1_3208	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Rpdx1_3209	SSF111369	HlyD-like secretion proteins
Rpdx1_3210	SSF50998	Quinoprotein alcohol dehydrogenase-like
Rpdx1_3211	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_3213	SSF55008	HMA, heavy metal-associated domain
Rpdx1_3217	SSF56784	HAD-like
Rpdx1_3217	SSF81653	Calcium ATPase, transduction domain A
Rpdx1_3220	SSF46689	Homeodomain-like
Rpdx1_3220	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_3222	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_3222	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_3223	SSF55073	Nucleotide cyclase
Rpdx1_3225	SSF56925	OMPA-like
Rpdx1_3226	SSF48452	TPR-like
Rpdx1_3227	SSF55961	Bet v1-like
Rpdx1_3229	SSF50447	Translation proteins
Rpdx1_3229	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3229	SSF54980	EF-G C-terminal domain-like
Rpdx1_3230	SSF103481	Multidrug resistance efflux transporter EmrE
Rpdx1_3232	SSF109755	PhoU-like
Rpdx1_3236	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3237	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3238	SSF52833	Thioredoxin-like
Rpdx1_3239	SSF50800	PK beta-barrel domain-like
Rpdx1_3239	SSF51621	Phosphoenolpyruvate/pyruvate domain
Rpdx1_3240	SSF52833	Thioredoxin-like
Rpdx1_3242	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_3242	SSF54427	NTF2-like
Rpdx1_3243	SSF89447	AbrB/MazE/MraZ-like
Rpdx1_3244	SSF50475	FMN-binding split barrel
Rpdx1_3246	SSF51197	Clavaminate synthase-like
Rpdx1_3247	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3250	SSF46689	Homeodomain-like
Rpdx1_3250	SSF51182	RmlC-like cupins
Rpdx1_3253	SSF46689	Homeodomain-like
Rpdx1_3262	SSF46689	Homeodomain-like
Rpdx1_3263	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_3265	SSF46894	C-terminal effector domain of the bipartite response regulators
Rpdx1_3265	SSF52172	CheY-like
Rpdx1_3266	SSF140804	YidB-like
Rpdx1_3267	SSF81330	Gated mechanosensitive channel
Rpdx1_3269	SSF103190	Sensory domain-like
Rpdx1_3269	SSF158472	HAMP domain-like
Rpdx1_3269	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_3270	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_3271	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_3271	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_3272	SSF141868	EAL domain-like
Rpdx1_3272	SSF55073	Nucleotide cyclase
Rpdx1_3276	SSF54427	NTF2-like
Rpdx1_3280	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3283	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3285	SSF55073	Nucleotide cyclase
Rpdx1_3286	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_3286	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_3288	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_3288	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_3289	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3291	SSF63829	Calcium-dependent phosphotriesterase
Rpdx1_3292	SSF53822	Periplasmic binding protein-like I
Rpdx1_3294	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_3294	SSF48008	GntR ligand-binding domain-like
Rpdx1_3296	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3299	SSF53955	Lysozyme-like
Rpdx1_3300	SSF51306	LexA/Signal peptidase
Rpdx1_3303	SSF46955	Putative DNA-binding domain
Rpdx1_3306	SSF47413	lambda repressor-like DNA-binding domains
Rpdx1_3312	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3312	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_3313	SSF109709	KorB DNA-binding domain-like
Rpdx1_3313	SSF110849	ParB/Sulfiredoxin
Rpdx1_3316	SSF56349	DNA breaking-rejoining enzymes
Rpdx1_3317	SSF52317	Class I glutamine amidotransferase-like
Rpdx1_3317	SSF52402	Adenine nucleotide alpha hydrolases-like
Rpdx1_3317	SSF54810	GMP synthetase C-terminal dimerisation domain
Rpdx1_3318	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_3319	SSF50129	GroES-like
Rpdx1_3319	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3320	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
Rpdx1_3320	SSF54631	CBS-domain pair
Rpdx1_3322	SSF103473	MFS general substrate transporter
Rpdx1_3324	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_3326	SSF53067	Actin-like ATPase domain
Rpdx1_3327	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
Rpdx1_3327	SSF56003	Molybdenum cofactor-binding domain
Rpdx1_3328	SSF53822	Periplasmic binding protein-like I
Rpdx1_3329	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_3331	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3332	SSF51419	PLP-binding barrel
Rpdx1_3333	SSF160996	HI0933 insert domain-like
Rpdx1_3333	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_3334	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3335	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_3336	SSF50129	GroES-like
Rpdx1_3336	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3337	SSF52833	Thioredoxin-like
Rpdx1_3338	SSF47616	GST C-terminal domain-like
Rpdx1_3338	SSF52833	Thioredoxin-like
Rpdx1_3339	SSF51726	UROD/MetE-like
Rpdx1_3341	SSF53271	PRTase-like
Rpdx1_3342	SSF53218	Molybdenum cofactor biosynthesis proteins
Rpdx1_3343	SSF56059	Glutathione synthetase ATP-binding domain-like
Rpdx1_3345	SSF54001	Cysteine proteinases
Rpdx1_3346	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Rpdx1_3347	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_3348	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_3349	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3350	SSF141066	ICP-like
Rpdx1_3351	SSF51182	RmlC-like cupins
Rpdx1_3352	SSF51649	RuBisCo, C-terminal domain
Rpdx1_3352	SSF54966	RuBisCO, large subunit, small (N-terminal) domain
Rpdx1_3355	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3358	SSF50129	GroES-like
Rpdx1_3359	SSF48592	GroEL equatorial domain-like
Rpdx1_3359	SSF52029	GroEL apical domain-like
Rpdx1_3359	SSF54849	GroEL-intermediate domain like
Rpdx1_3360	SSF143011	RelE-like
Rpdx1_3361	SSF47413	lambda repressor-like DNA-binding domains
Rpdx1_3362	SSF47413	lambda repressor-like DNA-binding domains
Rpdx1_3364	SSF101327	YgfB-like
Rpdx1_3364	SSF103642	Sec-C motif
Rpdx1_3365	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_3366	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3370	SSF52833	Thioredoxin-like
Rpdx1_3371	SSF143975	IlvD/EDD N-terminal domain-like
Rpdx1_3371	SSF52016	LeuD/IlvD-like
Rpdx1_3373	SSF53720	ALDH-like
Rpdx1_3374	SSF141868	EAL domain-like
Rpdx1_3374	SSF55073	Nucleotide cyclase
Rpdx1_3374	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_3375	SSF103481	Multidrug resistance efflux transporter EmrE
Rpdx1_3376	SSF51430	NAD(P)-linked oxidoreductase
Rpdx1_3377	SSF49482	Aromatic compound dioxygenase
Rpdx1_3378	SSF56601	beta-lactamase/transpeptidase-like
Rpdx1_3379	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_3380	SSF52096	ClpP/crotonase
Rpdx1_3381	SSF51230	Single hybrid motif
Rpdx1_3381	SSF51246	Rudiment single hybrid motif
Rpdx1_3381	SSF52440	PreATP-grasp domain
Rpdx1_3381	SSF56059	Glutathione synthetase ATP-binding domain-like
Rpdx1_3382	SSF52096	ClpP/crotonase
Rpdx1_3383	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_3385	SSF46689	Homeodomain-like
Rpdx1_3386	SSF47616	GST C-terminal domain-like
Rpdx1_3386	SSF52833	Thioredoxin-like
Rpdx1_3387	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_3387	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_3388	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_3388	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_3389	SSF46626	Cytochrome c
Rpdx1_3390	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_3390	SSF52172	CheY-like
Rpdx1_3390	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_3392	SSF52096	ClpP/crotonase
Rpdx1_3398	SSF74653	TolA/TonB C-terminal domain
Rpdx1_3401	SSF144064	Heme iron utilization protein-like
Rpdx1_3402	SSF54909	Dimeric alpha+beta barrel
Rpdx1_3403	SSF56935	Porins
Rpdx1_3404	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3405	SSF102114	Radical SAM enzymes
Rpdx1_3407	SSF53807	"Helical backbone" metal receptor
Rpdx1_3408	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Rpdx1_3409	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3410	SSF52218	Flavoproteins
Rpdx1_3411	SSF160448	PG1857-like
Rpdx1_3412	SSF47413	lambda repressor-like DNA-binding domains
Rpdx1_3412	SSF55234	Cyanase C-terminal domain
Rpdx1_3413	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3414	SSF161098	MetI-like
Rpdx1_3415	SSF53850	Periplasmic binding protein-like II
Rpdx1_3416	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3416	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_3417	SSF53790	Tetrapyrrole methylase
Rpdx1_3418	SSF52317	Class I glutamine amidotransferase-like
Rpdx1_3418	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3420	SSF52733	Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
Rpdx1_3421	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_3421	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Rpdx1_3422	SSF103501	Respiratory nitrate reductase 1 gamma chain
Rpdx1_3424	SSF63965	Precorrin-8X methylmutase CbiC/CobH
Rpdx1_3425	SSF53790	Tetrapyrrole methylase
Rpdx1_3426	SSF53790	Tetrapyrrole methylase
Rpdx1_3428	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_3428	SSF53790	Tetrapyrrole methylase
Rpdx1_3429	SSF159664	CobE/GbiG C-terminal domain-like
Rpdx1_3430	SSF53790	Tetrapyrrole methylase
Rpdx1_3431	SSF52317	Class I glutamine amidotransferase-like
Rpdx1_3431	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3432	SSF53790	Tetrapyrrole methylase
Rpdx1_3433	SSF53807	"Helical backbone" metal receptor
Rpdx1_3436	SSF64307	SirA-like
Rpdx1_3438	SSF143631	ApbE-like
Rpdx1_3439	SSF160387	NosL/MerB-like
Rpdx1_3441	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3442	SSF51126	Pectin lyase-like
Rpdx1_3443	SSF49503	Cupredoxins
Rpdx1_3443	SSF50974	Nitrous oxide reductase, N-terminal domain
Rpdx1_3444	SSF54862	4Fe-4S ferredoxins
Rpdx1_3445	SSF47240	Ferritin-like
Rpdx1_3449	SSF55811	Nudix
Rpdx1_3450	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Rpdx1_3450	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Rpdx1_3450	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Rpdx1_3451	SSF111369	HlyD-like secretion proteins
Rpdx1_3452	SSF56954	Outer membrane efflux proteins (OEP)
Rpdx1_3454	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_3455	SSF53383	PLP-dependent transferases
Rpdx1_3455	SSF55904	Ornithine decarboxylase C-terminal domain
Rpdx1_3457	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3458	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_3463	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
Rpdx1_3463	SSF51569	Aldolase
Rpdx1_3464	SSF102114	Radical SAM enzymes
Rpdx1_3465	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_3466	SSF47598	Ribbon-helix-helix
Rpdx1_3467	SSF55811	Nudix
Rpdx1_3468	SSF53850	Periplasmic binding protein-like II
Rpdx1_3469	SSF161098	MetI-like
Rpdx1_3471	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3472	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3473	SSF161098	MetI-like
Rpdx1_3473	SSF53850	Periplasmic binding protein-like II
Rpdx1_3474	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3475	SSF53822	Periplasmic binding protein-like I
Rpdx1_3476	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_3476	SSF48008	GntR ligand-binding domain-like
Rpdx1_3477	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Rpdx1_3477	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3479	SSF103481	Multidrug resistance efflux transporter EmrE
Rpdx1_3481	SSF55021	ACT-like
Rpdx1_3482	SSF52467	DHS-like NAD/FAD-binding domain
Rpdx1_3482	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Rpdx1_3483	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3484	SSF56784	HAD-like
Rpdx1_3485	SSF64288	Chorismate lyase-like
Rpdx1_3486	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3487	SSF69118	AhpD-like
Rpdx1_3490	SSF47336	ACP-like
Rpdx1_3491	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_3492	SSF53901	Thiolase-like
Rpdx1_3493	SSF53901	Thiolase-like
Rpdx1_3494	SSF50129	GroES-like
Rpdx1_3494	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3496	SSF102114	Radical SAM enzymes
Rpdx1_3497	SSF53850	Periplasmic binding protein-like II
Rpdx1_3498	SSF53383	PLP-dependent transferases
Rpdx1_3499	SSF52821	Rhodanese/Cell cycle control phosphatase
Rpdx1_3500	SSF103088	OmpA-like
Rpdx1_3504	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3504	SSF90123	ABC transporter transmembrane region
Rpdx1_3505	SSF102405	MCP/YpsA-like
Rpdx1_3506	SSF46626	Cytochrome c
Rpdx1_3507	SSF55103	FAD-linked oxidases, C-terminal domain
Rpdx1_3507	SSF56176	FAD-binding/transporter-associated domain-like
Rpdx1_3508	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Rpdx1_3509	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
Rpdx1_3509	SSF51569	Aldolase
Rpdx1_3510	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_3512	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Rpdx1_3512	SSF52374	Nucleotidylyl transferase
Rpdx1_3515	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_3516	SSF46894	C-terminal effector domain of the bipartite response regulators
Rpdx1_3517	SSF89447	AbrB/MazE/MraZ-like
Rpdx1_3518	SSF88723	PIN domain-like
Rpdx1_3520	SSF52402	Adenine nucleotide alpha hydrolases-like
Rpdx1_3520	SSF56317	Carbon-nitrogen hydrolase
Rpdx1_3522	SSF51569	Aldolase
Rpdx1_3523	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_3523	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Rpdx1_3525	SSF100950	NagB/RpiA/CoA transferase-like
Rpdx1_3525	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
Rpdx1_3526	SSF56784	HAD-like
Rpdx1_3528	SSF102114	Radical SAM enzymes
Rpdx1_3532	SSF117916	Fe-S cluster assembly (FSCA) domain-like
Rpdx1_3532	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3533	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Rpdx1_3533	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3534	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_3534	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_3536	SSF50630	Acid proteases
Rpdx1_3537	SSF51395	FMN-linked oxidoreductases
Rpdx1_3538	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Rpdx1_3538	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Rpdx1_3538	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Rpdx1_3539	SSF111369	HlyD-like secretion proteins
Rpdx1_3540	SSF46689	Homeodomain-like
Rpdx1_3541	SSF55073	Nucleotide cyclase
Rpdx1_3543	SSF52151	FabD/lysophospholipase-like
Rpdx1_3545	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Rpdx1_3545	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Rpdx1_3545	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Rpdx1_3546	SSF111369	HlyD-like secretion proteins
Rpdx1_3547	SSF111369	HlyD-like secretion proteins
Rpdx1_3548	SSF46689	Homeodomain-like
Rpdx1_3548	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_3549	SSF51679	Bacterial luciferase-like
Rpdx1_3550	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3551	SSF50129	GroES-like
Rpdx1_3551	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3552	SSF102114	Radical SAM enzymes
Rpdx1_3554	SSF48613	Heme oxygenase-like
Rpdx1_3555	SSF56281	Metallo-hydrolase/oxidoreductase
Rpdx1_3557	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_3557	SSF48008	GntR ligand-binding domain-like
Rpdx1_3558	SSF89796	CoA-transferase family III (CaiB/BaiF)
Rpdx1_3559	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Rpdx1_3559	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3560	SSF56529	FAH
Rpdx1_3561	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
Rpdx1_3562	SSF50129	GroES-like
Rpdx1_3562	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3563	SSF160240	Cation efflux protein cytoplasmic domain-like
Rpdx1_3563	SSF161111	Cation efflux protein transmembrane domain-like
Rpdx1_3564	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_3564	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_3564	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_3565	SSF103515	Autotransporter
Rpdx1_3565	SSF52743	Subtilisin-like
Rpdx1_3566	SSF46689	Homeodomain-like
Rpdx1_3568	SSF81301	Nucleotidyltransferase
Rpdx1_3568	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
Rpdx1_3569	SSF158472	HAMP domain-like
Rpdx1_3569	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_3569	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_3570	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_3570	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_3571	SSF52172	CheY-like
Rpdx1_3572	SSF50156	PDZ domain-like
Rpdx1_3572	SSF50494	Trypsin-like serine proteases
Rpdx1_3573	SSF47240	Ferritin-like
Rpdx1_3573	SSF54292	2Fe-2S ferredoxin-like
Rpdx1_3574	SSF47240	Ferritin-like
Rpdx1_3575	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3576	SSF56317	Carbon-nitrogen hydrolase
Rpdx1_3579	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3582	SSF82093	Heme chaperone CcmE
Rpdx1_3583	SSF48452	TPR-like
Rpdx1_3586	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_3586	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_3587	SSF46894	C-terminal effector domain of the bipartite response regulators
Rpdx1_3587	SSF52172	CheY-like
Rpdx1_3589	SSF53955	Lysozyme-like
Rpdx1_3590	SSF102114	Radical SAM enzymes
Rpdx1_3592	SSF51445	(Trans)glycosidases
Rpdx1_3593	SSF81342	Transmembrane di-heme cytochromes
Rpdx1_3595	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_3597	SSF51316	Mss4-like
Rpdx1_3598	SSF54001	Cysteine proteinases
Rpdx1_3600	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_3600	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_3601	SSF53901	Thiolase-like
Rpdx1_3602	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3603	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_3604	SSF46689	Homeodomain-like
Rpdx1_3605	SSF46894	C-terminal effector domain of the bipartite response regulators
Rpdx1_3607	SSF64518	Phase 1 flagellin
Rpdx1_3616	SSF50494	Trypsin-like serine proteases
Rpdx1_3620	SSF143100	TTHA1013/TTHA0281-like
Rpdx1_3623	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_3624	SSF52980	Restriction endonuclease-like
Rpdx1_3625	SSF48371	ARM repeat
Rpdx1_3627	SSF56563	Major capsid protein gp5
Rpdx1_3628	SSF50789	Herpes virus serine proteinase, assemblin
Rpdx1_3635	SSF53850	Periplasmic binding protein-like II
Rpdx1_3636	SSF103473	MFS general substrate transporter
Rpdx1_3637	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Rpdx1_3641	SSF56601	beta-lactamase/transpeptidase-like
Rpdx1_3642	SSF56281	Metallo-hydrolase/oxidoreductase
Rpdx1_3643	SSF52743	Subtilisin-like
Rpdx1_3644	SSF52151	FabD/lysophospholipase-like
Rpdx1_3645	SSF56935	Porins
Rpdx1_3648	SSF46689	Homeodomain-like
Rpdx1_3648	SSF53098	Ribonuclease H-like
Rpdx1_3650	SSF53822	Periplasmic binding protein-like I
Rpdx1_3651	SSF54292	2Fe-2S ferredoxin-like
Rpdx1_3652	SSF48264	Cytochrome P450
Rpdx1_3653	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_3656	SSF53955	Lysozyme-like
Rpdx1_3656	SSF56601	beta-lactamase/transpeptidase-like
Rpdx1_3657	SSF160935	VPA0735-like
Rpdx1_3662	SSF88713	Glycoside hydrolase/deacetylase
Rpdx1_3665	SSF47090	PGBD-like
Rpdx1_3666	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_3666	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_3666	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_3668	SSF82649	SufE/NifU
Rpdx1_3670	SSF46689	Homeodomain-like
Rpdx1_3670	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_3671	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3674	SSF53639	AraD/HMP-PK domain-like
Rpdx1_3680	SSF56935	Porins
Rpdx1_3681	SSF53187	Zn-dependent exopeptidases
Rpdx1_3682	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3685	SSF51717	Dihydropteroate synthetase-like
Rpdx1_3686	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Rpdx1_3687	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
Rpdx1_3688	SSF51703	Cobalamin (vitamin B12)-dependent enzymes
Rpdx1_3688	SSF52242	Cobalamin (vitamin B12)-binding domain
Rpdx1_3689	SSF51316	Mss4-like
Rpdx1_3690	SSF51703	Cobalamin (vitamin B12)-dependent enzymes
Rpdx1_3690	SSF52242	Cobalamin (vitamin B12)-binding domain
Rpdx1_3691	SSF143120	YefM-like
Rpdx1_3692	SSF88723	PIN domain-like
Rpdx1_3693	SSF81301	Nucleotidyltransferase
Rpdx1_3696	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3697	SSF53182	Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
Rpdx1_3698	SSF51126	Pectin lyase-like
Rpdx1_3699	SSF56935	Porins
Rpdx1_3701	SSF158472	HAMP domain-like
Rpdx1_3701	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_3704	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Rpdx1_3704	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Rpdx1_3705	SSF55073	Nucleotide cyclase
Rpdx1_3707	SSF56935	Porins
Rpdx1_3708	SSF56935	Porins
Rpdx1_3711	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Rpdx1_3711	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Rpdx1_3713	SSF52096	ClpP/crotonase
Rpdx1_3714	SSF56954	Outer membrane efflux proteins (OEP)
Rpdx1_3716	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Rpdx1_3716	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Rpdx1_3716	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Rpdx1_3717	SSF111369	HlyD-like secretion proteins
Rpdx1_3718	SSF89796	CoA-transferase family III (CaiB/BaiF)
Rpdx1_3719	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_3719	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_3720	SSF46894	C-terminal effector domain of the bipartite response regulators
Rpdx1_3720	SSF52172	CheY-like
Rpdx1_3722	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_3723	SSF56300	Metallo-dependent phosphatases
Rpdx1_3725	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_3726	SSF89550	PHP domain-like
Rpdx1_3727	SSF56672	DNA/RNA polymerases
Rpdx1_3728	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3729	SSF102114	Radical SAM enzymes
Rpdx1_3729	SSF47781	RuvA domain 2-like
Rpdx1_3730	SSF52141	Uracil-DNA glycosylase-like
Rpdx1_3731	SSF53822	Periplasmic binding protein-like I
Rpdx1_3732	SSF46689	Homeodomain-like
Rpdx1_3732	SSF53098	Ribonuclease H-like
Rpdx1_3733	SSF82544	GckA/TtuD-like
Rpdx1_3734	SSF55073	Nucleotide cyclase
Rpdx1_3735	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3738	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_3740	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3741	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3742	SSF55073	Nucleotide cyclase
Rpdx1_3743	SSF53822	Periplasmic binding protein-like I
Rpdx1_3744	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_3745	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_3746	SSF52096	ClpP/crotonase
Rpdx1_3751	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_3751	SSF54373	FAD-linked reductases, C-terminal domain
Rpdx1_3752	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_3753	SSF56529	FAH
Rpdx1_3754	SSF75304	Amidase signature (AS) enzymes
Rpdx1_3755	SSF50249	Nucleic acid-binding proteins
Rpdx1_3756	SSF53901	Thiolase-like
Rpdx1_3757	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3758	SSF103088	OmpA-like
Rpdx1_3759	SSF103481	Multidrug resistance efflux transporter EmrE
Rpdx1_3760	SSF51621	Phosphoenolpyruvate/pyruvate domain
Rpdx1_3763	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_3763	SSF53850	Periplasmic binding protein-like II
Rpdx1_3764	SSF103190	Sensory domain-like
Rpdx1_3764	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_3764	SSF52172	CheY-like
Rpdx1_3764	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_3764	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_3765	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_3766	SSF52096	ClpP/crotonase
Rpdx1_3767	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3768	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_3769	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_3769	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_3770	SSF52096	ClpP/crotonase
Rpdx1_3772	SSF56112	Protein kinase-like (PK-like)
Rpdx1_3773	SSF52096	ClpP/crotonase
Rpdx1_3774	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3775	SSF53901	Thiolase-like
Rpdx1_3776	SSF51658	Xylose isomerase-like
Rpdx1_3779	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3780	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3783	SSF53822	Periplasmic binding protein-like I
Rpdx1_3784	SSF160920	PSTPO5379-like
Rpdx1_3785	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_3785	SSF53850	Periplasmic binding protein-like II
Rpdx1_3786	SSF53187	Zn-dependent exopeptidases
Rpdx1_3786	SSF55031	Bacterial exopeptidase dimerisation domain
Rpdx1_3787	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3787	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Rpdx1_3789	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Rpdx1_3790	SSF53822	Periplasmic binding protein-like I
Rpdx1_3791	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3792	SSF51445	(Trans)glycosidases
Rpdx1_3793	SSF90123	ABC transporter transmembrane region
Rpdx1_3794	SSF75304	Amidase signature (AS) enzymes
Rpdx1_3795	SSF53474	alpha/beta-Hydrolases
Rpdx1_3795	SSF82784	OsmC-like
Rpdx1_3798	SSF53720	ALDH-like
Rpdx1_3798	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_3799	SSF52096	ClpP/crotonase
Rpdx1_3800	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_3801	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_3802	SSF51197	Clavaminate synthase-like
Rpdx1_3803	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_3803	SSF53850	Periplasmic binding protein-like II
Rpdx1_3804	SSF50475	FMN-binding split barrel
Rpdx1_3807	SSF103190	Sensory domain-like
Rpdx1_3807	SSF55073	Nucleotide cyclase
Rpdx1_3810	SSF51206	cAMP-binding domain-like
Rpdx1_3811	SSF52096	ClpP/crotonase
Rpdx1_3813	SSF55469	FMN-dependent nitroreductase-like
Rpdx1_3814	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_3814	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_3815	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_3815	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_3816	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_3816	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_3817	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_3818	SSF52096	ClpP/crotonase
Rpdx1_3819	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3820	SSF46689	Homeodomain-like
Rpdx1_3820	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_3821	SSF53901	Thiolase-like
Rpdx1_3822	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_3824	SSF75304	Amidase signature (AS) enzymes
Rpdx1_3825	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_3825	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_3828	SSF142433	CinA-like
Rpdx1_3829	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
Rpdx1_3829	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
Rpdx1_3830	SSF103473	MFS general substrate transporter
Rpdx1_3835	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_3836	SSF53720	ALDH-like
Rpdx1_3837	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_3837	SSF54373	FAD-linked reductases, C-terminal domain
Rpdx1_3838	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3839	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3840	SSF46894	C-terminal effector domain of the bipartite response regulators
Rpdx1_3840	SSF52172	CheY-like
Rpdx1_3841	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_3841	SSF52172	CheY-like
Rpdx1_3841	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_3842	SSF158472	HAMP domain-like
Rpdx1_3842	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_3843	SSF52172	CheY-like
Rpdx1_3844	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Rpdx1_3846	SSF52402	Adenine nucleotide alpha hydrolases-like
Rpdx1_3846	SSF56112	Protein kinase-like (PK-like)
Rpdx1_3847	SSF56300	Metallo-dependent phosphatases
Rpdx1_3849	SSF102114	Radical SAM enzymes
Rpdx1_3850	SSF111126	Ligand-binding domain in the NO signalling and Golgi transport
Rpdx1_3851	SSF102114	Radical SAM enzymes
Rpdx1_3853	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Rpdx1_3854	SSF46689	Homeodomain-like
Rpdx1_3854	SSF53098	Ribonuclease H-like
Rpdx1_3857	SSF47240	Ferritin-like
Rpdx1_3857	SSF56784	HAD-like
Rpdx1_3857	SSF81653	Calcium ATPase, transduction domain A
Rpdx1_3857	SSF81665	Calcium ATPase, transmembrane domain M
Rpdx1_3859	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Rpdx1_3861	SSF55073	Nucleotide cyclase
Rpdx1_3863	SSF53822	Periplasmic binding protein-like I
Rpdx1_3864	SSF51430	NAD(P)-linked oxidoreductase
Rpdx1_3865	SSF53137	Translational machinery components
Rpdx1_3866	SSF53822	Periplasmic binding protein-like I
Rpdx1_3868	SSF47598	Ribbon-helix-helix
Rpdx1_3869	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3871	SSF111369	HlyD-like secretion proteins
Rpdx1_3872	SSF53474	alpha/beta-Hydrolases
Rpdx1_3875	SSF54001	Cysteine proteinases
Rpdx1_3876	SSF47188	Hemerythrin-like
Rpdx1_3876	SSF55073	Nucleotide cyclase
Rpdx1_3877	SSF46689	Homeodomain-like
Rpdx1_3881	SSF47188	Hemerythrin-like
Rpdx1_3881	SSF55073	Nucleotide cyclase
Rpdx1_3881	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_3882	SSF103473	MFS general substrate transporter
Rpdx1_3886	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Rpdx1_3886	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Rpdx1_3888	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3889	SSF52172	CheY-like
Rpdx1_3890	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
Rpdx1_3890	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_3891	SSF52172	CheY-like
Rpdx1_3891	SSF52738	Methylesterase CheB, C-terminal domain
Rpdx1_3892	SSF52172	CheY-like
Rpdx1_3893	SSF50341	CheW-like
Rpdx1_3894	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Rpdx1_3894	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_3894	SSF50341	CheW-like
Rpdx1_3894	SSF52172	CheY-like
Rpdx1_3894	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_3896	SSF56655	Carbohydrate phosphatase
Rpdx1_3904	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Rpdx1_3905	SSF141523	L,D-transpeptidase catalytic domain-like
Rpdx1_3908	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_3909	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_3909	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_3910	SSF48264	Cytochrome P450
Rpdx1_3911	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_3911	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_3912	SSF89796	CoA-transferase family III (CaiB/BaiF)
Rpdx1_3913	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_3914	SSF52467	DHS-like NAD/FAD-binding domain
Rpdx1_3914	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Rpdx1_3915	SSF56601	beta-lactamase/transpeptidase-like
Rpdx1_3916	SSF52949	Macro domain-like
Rpdx1_3917	SSF52833	Thioredoxin-like
Rpdx1_3918	SSF56436	C-type lectin-like
Rpdx1_3919	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_3921	SSF82657	BolA-like
Rpdx1_3924	SSF55326	PurM N-terminal domain-like
Rpdx1_3924	SSF56042	PurM C-terminal domain-like
Rpdx1_3926	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Rpdx1_3928	SSF53681	Aspartate/glutamate racemase
Rpdx1_3929	SSF51182	RmlC-like cupins
Rpdx1_3930	SSF52777	CoA-dependent acyltransferases
Rpdx1_3933	SSF55174	Alpha-L RNA-binding motif
Rpdx1_3934	SSF53383	PLP-dependent transferases
Rpdx1_3935	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_3939	SSF54292	2Fe-2S ferredoxin-like
Rpdx1_3939	SSF55073	Nucleotide cyclase
Rpdx1_3939	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
Rpdx1_3942	SSF51730	FAD-linked oxidoreductase
Rpdx1_3942	SSF53720	ALDH-like
Rpdx1_3942	SSF81935	N-terminal domain of bifunctional PutA protein
Rpdx1_3943	SSF89796	CoA-transferase family III (CaiB/BaiF)
Rpdx1_3944	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Rpdx1_3944	SSF63380	Riboflavin synthase domain-like
Rpdx1_3946	SSF47616	GST C-terminal domain-like
Rpdx1_3946	SSF52833	Thioredoxin-like
Rpdx1_3947	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_3948	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_3951	SSF140478	LemA-like
Rpdx1_3952	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
Rpdx1_3952	SSF56003	Molybdenum cofactor-binding domain
Rpdx1_3954	SSF51569	Aldolase
Rpdx1_3955	SSF50993	Peptidase/esterase 'gauge' domain
Rpdx1_3955	SSF53474	alpha/beta-Hydrolases
Rpdx1_3956	SSF53383	PLP-dependent transferases
Rpdx1_3957	SSF53474	alpha/beta-Hydrolases
Rpdx1_3958	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3959	SSF55239	RuBisCO, small subunit
Rpdx1_3960	SSF51649	RuBisCo, C-terminal domain
Rpdx1_3960	SSF54966	RuBisCO, large subunit, small (N-terminal) domain
Rpdx1_3961	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Rpdx1_3961	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_3961	SSF52172	CheY-like
Rpdx1_3961	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_3961	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_3962	SSF52172	CheY-like
Rpdx1_3963	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Rpdx1_3963	SSF52172	CheY-like
Rpdx1_3965	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_3965	SSF53850	Periplasmic binding protein-like II
Rpdx1_3966	SSF53383	PLP-dependent transferases
Rpdx1_3968	SSF47240	Ferritin-like
Rpdx1_3972	SSF50346	PRC-barrel domain
Rpdx1_3972	SSF81490	Photosystem II reaction centre subunit H, transmembrane region
Rpdx1_3973	SSF103473	MFS general substrate transporter
Rpdx1_3974	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_3975	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3977	SSF53807	"Helical backbone" metal receptor
Rpdx1_3978	SSF53807	"Helical backbone" metal receptor
Rpdx1_3980	SSF52242	Cobalamin (vitamin B12)-binding domain
Rpdx1_3981	SSF48613	Heme oxygenase-like
Rpdx1_3982	SSF55781	GAF domain-like
Rpdx1_3982	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_3983	SSF46689	Homeodomain-like
Rpdx1_3983	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_3984	SSF46626	Cytochrome c
Rpdx1_3987	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_3988	SSF103473	MFS general substrate transporter
Rpdx1_3990	SSF46689	Homeodomain-like
Rpdx1_3990	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_3991	SSF81483	Bacterial photosystem II reaction centre, L and M subunits
Rpdx1_3992	SSF81483	Bacterial photosystem II reaction centre, L and M subunits
Rpdx1_3993	SSF56918	Light-harvesting complex subunits
Rpdx1_3994	SSF56918	Light-harvesting complex subunits
Rpdx1_3996	SSF53807	"Helical backbone" metal receptor
Rpdx1_3997	SSF53807	"Helical backbone" metal receptor
Rpdx1_3998	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_3999	SSF50129	GroES-like
Rpdx1_3999	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4000	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_4000	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_4001	SSF48576	Terpenoid synthases
Rpdx1_4002	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_4003	SSF159245	AttH-like
Rpdx1_4004	SSF82771	GIY-YIG endonuclease
Rpdx1_4007	SSF102886	Coproporphyrinogen III oxidase
Rpdx1_4008	SSF48576	Terpenoid synthases
Rpdx1_4009	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_4010	SSF53474	alpha/beta-Hydrolases
Rpdx1_4011	SSF53474	alpha/beta-Hydrolases
Rpdx1_4012	SSF51726	UROD/MetE-like
Rpdx1_4013	SSF141371	PilZ domain-like
Rpdx1_4014	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4014	SSF53300	vWA-like
Rpdx1_4015	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4016	SSF53850	Periplasmic binding protein-like II
Rpdx1_4016	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
Rpdx1_4018	SSF53474	alpha/beta-Hydrolases
Rpdx1_4019	SSF49785	Galactose-binding domain-like
Rpdx1_4021	SSF47240	Ferritin-like
Rpdx1_4023	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Rpdx1_4023	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Rpdx1_4023	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Rpdx1_4024	SSF111369	HlyD-like secretion proteins
Rpdx1_4025	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_4028	SSF103473	MFS general substrate transporter
Rpdx1_4029	SSF56918	Light-harvesting complex subunits
Rpdx1_4030	SSF56918	Light-harvesting complex subunits
Rpdx1_4031	SSF55781	GAF domain-like
Rpdx1_4031	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_4031	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_4032	SSF46894	C-terminal effector domain of the bipartite response regulators
Rpdx1_4032	SSF52172	CheY-like
Rpdx1_4033	SSF89796	CoA-transferase family III (CaiB/BaiF)
Rpdx1_4037	SSF53738	Phosphoglucomutase, first 3 domains
Rpdx1_4037	SSF55957	Phosphoglucomutase, C-terminal domain
Rpdx1_4038	SSF53474	alpha/beta-Hydrolases
Rpdx1_4039	SSF52172	CheY-like
Rpdx1_4040	SSF56300	Metallo-dependent phosphatases
Rpdx1_4041	SSF50331	MOP-like
Rpdx1_4041	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4042	SSF161098	MetI-like
Rpdx1_4043	SSF161098	MetI-like
Rpdx1_4044	SSF53850	Periplasmic binding protein-like II
Rpdx1_4048	SSF53850	Periplasmic binding protein-like II
Rpdx1_4049	SSF161098	MetI-like
Rpdx1_4050	SSF161098	MetI-like
Rpdx1_4051	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4053	SSF75304	Amidase signature (AS) enzymes
Rpdx1_4054	SSF54427	NTF2-like
Rpdx1_4055	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_4055	SSF48008	GntR ligand-binding domain-like
Rpdx1_4056	SSF75304	Amidase signature (AS) enzymes
Rpdx1_4057	SSF54631	CBS-domain pair
Rpdx1_4057	SSF81340	Clc chloride channel
Rpdx1_4058	SSF52317	Class I glutamine amidotransferase-like
Rpdx1_4059	SSF143975	IlvD/EDD N-terminal domain-like
Rpdx1_4059	SSF52016	LeuD/IlvD-like
Rpdx1_4060	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4062	SSF53300	vWA-like
Rpdx1_4063	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4064	SSF81442	Cytochrome c oxidase subunit I-like
Rpdx1_4065	SSF46626	Cytochrome c
Rpdx1_4067	SSF81452	Cytochrome c oxidase subunit III-like
Rpdx1_4069	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_4070	SSF51230	Single hybrid motif
Rpdx1_4070	SSF51246	Rudiment single hybrid motif
Rpdx1_4070	SSF52096	ClpP/crotonase
Rpdx1_4070	SSF52440	PreATP-grasp domain
Rpdx1_4070	SSF56059	Glutathione synthetase ATP-binding domain-like
Rpdx1_4071	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_4072	SSF161098	MetI-like
Rpdx1_4073	SSF161098	MetI-like
Rpdx1_4074	SSF53850	Periplasmic binding protein-like II
Rpdx1_4075	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4076	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4077	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_4077	SSF48008	GntR ligand-binding domain-like
Rpdx1_4079	SSF53850	Periplasmic binding protein-like II
Rpdx1_4080	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_4081	SSF53098	Ribonuclease H-like
Rpdx1_4083	SSF53850	Periplasmic binding protein-like II
Rpdx1_4084	SSF161098	MetI-like
Rpdx1_4085	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4085	SSF55021	ACT-like
Rpdx1_4086	SSF51161	Trimeric LpxA-like enzymes
Rpdx1_4087	SSF53383	PLP-dependent transferases
Rpdx1_4091	SSF111369	HlyD-like secretion proteins
Rpdx1_4092	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Rpdx1_4092	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Rpdx1_4092	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Rpdx1_4093	SSF50129	GroES-like
Rpdx1_4093	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4094	SSF47240	Ferritin-like
Rpdx1_4095	SSF52499	Isochorismatase-like hydrolases
Rpdx1_4097	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4098	SSF117396	TM1631-like
Rpdx1_4100	SSF47240	Ferritin-like
Rpdx1_4101	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_4101	SSF51206	cAMP-binding domain-like
Rpdx1_4104	SSF52172	CheY-like
Rpdx1_4105	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4107	SSF53474	alpha/beta-Hydrolases
Rpdx1_4109	SSF47240	Ferritin-like
Rpdx1_4110	SSF52096	ClpP/crotonase
Rpdx1_4111	SSF53474	alpha/beta-Hydrolases
Rpdx1_4112	SSF50129	GroES-like
Rpdx1_4112	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4113	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_4113	SSF51206	cAMP-binding domain-like
Rpdx1_4114	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
Rpdx1_4114	SSF56176	FAD-binding/transporter-associated domain-like
Rpdx1_4115	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
Rpdx1_4115	SSF56003	Molybdenum cofactor-binding domain
Rpdx1_4116	SSF47741	CO dehydrogenase ISP C-domain like
Rpdx1_4116	SSF54292	2Fe-2S ferredoxin-like
Rpdx1_4117	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_4118	SSF53822	Periplasmic binding protein-like I
Rpdx1_4120	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4121	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4122	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_4123	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_4124	SSF54862	4Fe-4S ferredoxins
Rpdx1_4125	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_4126	SSF53067	Actin-like ATPase domain
Rpdx1_4127	SSF53067	Actin-like ATPase domain
Rpdx1_4130	SSF50129	GroES-like
Rpdx1_4130	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4131	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_4132	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4133	SSF52096	ClpP/crotonase
Rpdx1_4134	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_4134	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_4135	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_4136	SSF52096	ClpP/crotonase
Rpdx1_4137	SSF51120	beta-Roll
Rpdx1_4138	SSF49785	Galactose-binding domain-like
Rpdx1_4138	SSF51120	beta-Roll
Rpdx1_4138	SSF51695	PLC-like phosphodiesterases
Rpdx1_4139	SSF100950	NagB/RpiA/CoA transferase-like
Rpdx1_4139	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_4140	SSF141072	CalX-like
Rpdx1_4140	SSF51120	beta-Roll
Rpdx1_4140	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
Rpdx1_4140	SSF56219	DNase I-like
Rpdx1_4140	SSF56300	Metallo-dependent phosphatases
Rpdx1_4141	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4141	SSF90123	ABC transporter transmembrane region
Rpdx1_4143	SSF50199	Staphylococcal nuclease
Rpdx1_4143	SSF50685	Barwin-like endoglucanases
Rpdx1_4145	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_4146	SSF52402	Adenine nucleotide alpha hydrolases-like
Rpdx1_4149	SSF53955	Lysozyme-like
Rpdx1_4151	SSF52317	Class I glutamine amidotransferase-like
Rpdx1_4152	SSF51182	RmlC-like cupins
Rpdx1_4153	SSF53901	Thiolase-like
Rpdx1_4154	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4155	SSF158472	HAMP domain-like
Rpdx1_4155	SSF55073	Nucleotide cyclase
Rpdx1_4156	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_4158	SSF47413	lambda repressor-like DNA-binding domains
Rpdx1_4159	SSF54786	YcfA/nrd intein domain
Rpdx1_4160	SSF143100	TTHA1013/TTHA0281-like
Rpdx1_4161	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Rpdx1_4161	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Rpdx1_4162	SSF56731	DNA primase core
Rpdx1_4162	SSF57783	Zinc beta-ribbon
Rpdx1_4164	SSF110857	Gamma-glutamyl cyclotransferase-like
Rpdx1_4165	SSF53187	Zn-dependent exopeptidases
Rpdx1_4168	SSF89095	GatB/YqeY motif
Rpdx1_4169	SSF53474	alpha/beta-Hydrolases
Rpdx1_4170	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
Rpdx1_4170	SSF52317	Class I glutamine amidotransferase-like
Rpdx1_4171	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_4172	SSF51182	RmlC-like cupins
Rpdx1_4173	SSF47240	Ferritin-like
Rpdx1_4174	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_4175	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4176	SSF54001	Cysteine proteinases
Rpdx1_4178	SSF160272	Shew3726-like
Rpdx1_4180	SSF46689	Homeodomain-like
Rpdx1_4180	SSF52172	CheY-like
Rpdx1_4180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4181	SSF101801	Surface presentation of antigens (SPOA)
Rpdx1_4183	SSF48029	FliG
Rpdx1_4185	SSF48295	TrpR-like
Rpdx1_4187	SSF55103	FAD-linked oxidases, C-terminal domain
Rpdx1_4187	SSF56176	FAD-binding/transporter-associated domain-like
Rpdx1_4188	SSF52402	Adenine nucleotide alpha hydrolases-like
Rpdx1_4189	SSF56784	HAD-like
Rpdx1_4189	SSF81653	Calcium ATPase, transduction domain A
Rpdx1_4189	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
Rpdx1_4189	SSF81665	Calcium ATPase, transmembrane domain M
Rpdx1_4193	SSF141130	Acetamidase/Formamidase-like
Rpdx1_4194	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4195	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4198	SSF53822	Periplasmic binding protein-like I
Rpdx1_4199	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_4199	SSF52172	CheY-like
Rpdx1_4199	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_4200	SSF46894	C-terminal effector domain of the bipartite response regulators
Rpdx1_4200	SSF52172	CheY-like
Rpdx1_4206	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_4207	SSF74653	TolA/TonB C-terminal domain
Rpdx1_4210	SSF52096	ClpP/crotonase
Rpdx1_4211	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_4211	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_4212	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_4212	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_4213	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_4214	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
Rpdx1_4215	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Rpdx1_4216	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Rpdx1_4216	SSF52922	TK C-terminal domain-like
Rpdx1_4217	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
Rpdx1_4217	SSF54862	4Fe-4S ferredoxins
Rpdx1_4218	SSF54862	4Fe-4S ferredoxins
Rpdx1_4221	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4222	SSF52091	SpoIIaa-like
Rpdx1_4223	SSF51604	Enolase C-terminal domain-like
Rpdx1_4223	SSF54826	Enolase N-terminal domain-like
Rpdx1_4224	SSF103473	MFS general substrate transporter
Rpdx1_4226	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Rpdx1_4227	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_4228	SSF56300	Metallo-dependent phosphatases
Rpdx1_4229	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_4230	SSF53613	Ribokinase-like
Rpdx1_4231	SSF54909	Dimeric alpha+beta barrel
Rpdx1_4232	SSF46626	Cytochrome c
Rpdx1_4233	SSF47175	Cytochromes
Rpdx1_4234	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
Rpdx1_4234	SSF56003	Molybdenum cofactor-binding domain
Rpdx1_4236	SSF53067	Actin-like ATPase domain
Rpdx1_4238	SSF53383	PLP-dependent transferases
Rpdx1_4239	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4239	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Rpdx1_4240	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4243	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4244	SSF52374	Nucleotidylyl transferase
Rpdx1_4244	SSF53613	Ribokinase-like
Rpdx1_4245	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4246	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_4247	SSF53697	SIS domain
Rpdx1_4248	SSF56784	HAD-like
Rpdx1_4249	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_4250	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4251	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4251	SSF90123	ABC transporter transmembrane region
Rpdx1_4252	SSF56529	FAH
Rpdx1_4254	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4255	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4255	SSF52980	Restriction endonuclease-like
Rpdx1_4256	SSF55073	Nucleotide cyclase
Rpdx1_4257	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4258	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_4258	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_4261	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Rpdx1_4261	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Rpdx1_4263	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Rpdx1_4264	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Rpdx1_4265	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4266	SSF53807	"Helical backbone" metal receptor
Rpdx1_4267	SSF56935	Porins
Rpdx1_4268	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_4271	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_4271	SSF53850	Periplasmic binding protein-like II
Rpdx1_4272	SSF55331	Tautomerase/MIF
Rpdx1_4273	SSF47598	Ribbon-helix-helix
Rpdx1_4274	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4274	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Rpdx1_4275	SSF55973	S-adenosylmethionine synthetase
Rpdx1_4276	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_4277	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Rpdx1_4277	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4277	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
Rpdx1_4278	SSF53822	Periplasmic binding protein-like I
Rpdx1_4281	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4282	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4283	SSF51726	UROD/MetE-like
Rpdx1_4284	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4285	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4288	SSF53822	Periplasmic binding protein-like I
Rpdx1_4290	SSF53328	Formyltransferase
Rpdx1_4290	SSF55021	ACT-like
Rpdx1_4291	SSF69618	HemD-like
Rpdx1_4292	SSF53822	Periplasmic binding protein-like I
Rpdx1_4295	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4296	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4297	SSF46955	Putative DNA-binding domain
Rpdx1_4298	SSF69118	AhpD-like
Rpdx1_4301	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4302	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_4305	SSF53822	Periplasmic binding protein-like I
Rpdx1_4306	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4307	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_4308	SSF53448	Nucleotide-diphospho-sugar transferases
Rpdx1_4309	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_4311	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4312	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_4313	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_4314	SSF88713	Glycoside hydrolase/deacetylase
Rpdx1_4315	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_4316	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_4317	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4318	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4319	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_4320	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_4321	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_4322	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_4324	SSF51182	RmlC-like cupins
Rpdx1_4325	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4326	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4327	SSF51182	RmlC-like cupins
Rpdx1_4327	SSF53448	Nucleotide-diphospho-sugar transferases
Rpdx1_4328	SSF53738	Phosphoglucomutase, first 3 domains
Rpdx1_4328	SSF55957	Phosphoglucomutase, C-terminal domain
Rpdx1_4331	SSF51316	Mss4-like
Rpdx1_4332	SSF55068	Peptide methionine sulfoxide reductase
Rpdx1_4333	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
Rpdx1_4333	SSF52335	Methylglyoxal synthase-like
Rpdx1_4333	SSF52440	PreATP-grasp domain
Rpdx1_4333	SSF56059	Glutathione synthetase ATP-binding domain-like
Rpdx1_4334	SSF46557	GreA transcript cleavage protein, N-terminal domain
Rpdx1_4334	SSF54534	FKBP-like
Rpdx1_4336	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_4336	SSF54909	Dimeric alpha+beta barrel
Rpdx1_4337	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_4338	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_4338	SSF53850	Periplasmic binding protein-like II
Rpdx1_4339	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4344	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_4344	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_4344	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_4346	SSF88723	PIN domain-like
Rpdx1_4347	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_4347	SSF51206	cAMP-binding domain-like
Rpdx1_4348	SSF140683	SP0561-like
Rpdx1_4349	SSF49503	Cupredoxins
Rpdx1_4350	SSF56436	C-type lectin-like
Rpdx1_4351	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Rpdx1_4351	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Rpdx1_4351	SSF54680	Pyrimidine nucleoside phosphorylase C-terminal domain
Rpdx1_4352	SSF53271	PRTase-like
Rpdx1_4353	SSF56281	Metallo-hydrolase/oxidoreductase
Rpdx1_4355	SSF53850	Periplasmic binding protein-like II
Rpdx1_4356	SSF161098	MetI-like
Rpdx1_4358	SSF53474	alpha/beta-Hydrolases
Rpdx1_4359	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4360	SSF53474	alpha/beta-Hydrolases
Rpdx1_4361	SSF161098	MetI-like
Rpdx1_4362	SSF55298	YjgF-like
Rpdx1_4363	SSF52499	Isochorismatase-like hydrolases
Rpdx1_4364	SSF53850	Periplasmic binding protein-like II
Rpdx1_4365	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_4365	SSF53850	Periplasmic binding protein-like II
Rpdx1_4366	SSF140990	FtsH protease domain-like
Rpdx1_4366	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4367	SSF100950	NagB/RpiA/CoA transferase-like
Rpdx1_4368	SSF100950	NagB/RpiA/CoA transferase-like
Rpdx1_4370	SSF161098	MetI-like
Rpdx1_4371	SSF161098	MetI-like
Rpdx1_4372	SSF50331	MOP-like
Rpdx1_4372	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4373	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_4374	SSF161098	MetI-like
Rpdx1_4375	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4376	SSF53850	Periplasmic binding protein-like II
Rpdx1_4377	SSF50475	FMN-binding split barrel
Rpdx1_4378	SSF56317	Carbon-nitrogen hydrolase
Rpdx1_4379	SSF141868	EAL domain-like
Rpdx1_4379	SSF55073	Nucleotide cyclase
Rpdx1_4379	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_4380	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_4384	SSF55073	Nucleotide cyclase
Rpdx1_4385	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
Rpdx1_4386	SSF51246	Rudiment single hybrid motif
Rpdx1_4386	SSF52440	PreATP-grasp domain
Rpdx1_4386	SSF56059	Glutathione synthetase ATP-binding domain-like
Rpdx1_4389	SSF51182	RmlC-like cupins
Rpdx1_4390	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Rpdx1_4391	SSF52467	DHS-like NAD/FAD-binding domain
Rpdx1_4393	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4393	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Rpdx1_4394	SSF81469	Bacterial aa3 type cytochrome c oxidase subunit IV
Rpdx1_4395	SSF140931	Fic-like
Rpdx1_4396	SSF89447	AbrB/MazE/MraZ-like
Rpdx1_4397	SSF55486	Metalloproteases ("zincins"), catalytic domain
Rpdx1_4399	SSF46689	Homeodomain-like
Rpdx1_4399	SSF52172	CheY-like
Rpdx1_4399	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4400	SSF141523	L,D-transpeptidase catalytic domain-like
Rpdx1_4400	SSF47090	PGBD-like
Rpdx1_4401	SSF55166	Hedgehog/DD-peptidase
Rpdx1_4403	SSF158757	SMc04008-like
Rpdx1_4405	SSF50800	PK beta-barrel domain-like
Rpdx1_4405	SSF51621	Phosphoenolpyruvate/pyruvate domain
Rpdx1_4405	SSF52935	PK C-terminal domain-like
Rpdx1_4406	SSF143100	TTHA1013/TTHA0281-like
Rpdx1_4409	SSF82784	OsmC-like
Rpdx1_4410	SSF48452	TPR-like
Rpdx1_4411	SSF57840	Ribosomal protein L36
Rpdx1_4412	SSF51556	Metallo-dependent hydrolases
Rpdx1_4413	SSF56784	HAD-like
Rpdx1_4414	SSF55826	YbaK/ProRS associated domain
Rpdx1_4419	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_4420	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_4423	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4424	SSF52151	FabD/lysophospholipase-like
Rpdx1_4425	SSF55797	PR-1-like
Rpdx1_4426	SSF54368	Glutamine synthetase, N-terminal domain
Rpdx1_4426	SSF55931	Glutamine synthetase/guanido kinase
Rpdx1_4428	SSF56601	beta-lactamase/transpeptidase-like
Rpdx1_4430	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
Rpdx1_4430	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
Rpdx1_4432	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4432	SSF53790	Tetrapyrrole methylase
Rpdx1_4432	SSF75615	Siroheme synthase middle domains-like
Rpdx1_4433	SSF53850	Periplasmic binding protein-like II
Rpdx1_4434	SSF161098	MetI-like
Rpdx1_4435	SSF161098	MetI-like
Rpdx1_4436	SSF51645	Malate synthase G
Rpdx1_4437	SSF69047	Hypothetical protein YjbJ
Rpdx1_4440	SSF141523	L,D-transpeptidase catalytic domain-like
Rpdx1_4443	SSF52172	CheY-like
Rpdx1_4445	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Rpdx1_4445	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Rpdx1_4447	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4450	SSF50692	ADC-like
Rpdx1_4450	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Rpdx1_4452	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_4452	SSF51206	cAMP-binding domain-like
Rpdx1_4453	SSF46626	Cytochrome c
Rpdx1_4454	SSF159594	XCC0632-like
Rpdx1_4455	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4456	SSF52091	SpoIIaa-like
Rpdx1_4459	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4459	SSF52210	Succinyl-CoA synthetase domains
Rpdx1_4459	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_4459	SSF56059	Glutathione synthetase ATP-binding domain-like
Rpdx1_4460	SSF54631	CBS-domain pair
Rpdx1_4461	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4461	SSF56112	Protein kinase-like (PK-like)
Rpdx1_4462	SSF53474	alpha/beta-Hydrolases
Rpdx1_4463	SSF52402	Adenine nucleotide alpha hydrolases-like
Rpdx1_4464	SSF52402	Adenine nucleotide alpha hydrolases-like
Rpdx1_4465	SSF54631	CBS-domain pair
Rpdx1_4466	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_4466	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_4466	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_4467	SSF46894	C-terminal effector domain of the bipartite response regulators
Rpdx1_4467	SSF52172	CheY-like
Rpdx1_4468	SSF52172	CheY-like
Rpdx1_4469	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_4469	SSF51206	cAMP-binding domain-like
Rpdx1_4470	SSF53383	PLP-dependent transferases
Rpdx1_4476	SSF54862	4Fe-4S ferredoxins
Rpdx1_4478	SSF50692	ADC-like
Rpdx1_4478	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Rpdx1_4478	SSF54292	2Fe-2S ferredoxin-like
Rpdx1_4478	SSF54862	4Fe-4S ferredoxins
Rpdx1_4479	SSF140490	Nqo1C-terminal domain-like
Rpdx1_4479	SSF142019	Nqo1 FMN-binding domain-like
Rpdx1_4479	SSF142984	Nqo1 middle domain-like
Rpdx1_4480	SSF52833	Thioredoxin-like
Rpdx1_4481	SSF143243	Nqo5-like
Rpdx1_4481	SSF56762	HydB/Nqo4-like
Rpdx1_4482	SSF56770	HydA/Nqo6-like
Rpdx1_4484	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4484	SSF90123	ABC transporter transmembrane region
Rpdx1_4485	SSF56601	beta-lactamase/transpeptidase-like
Rpdx1_4486	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_4487	SSF52833	Thioredoxin-like
Rpdx1_4488	SSF53098	Ribonuclease H-like
Rpdx1_4489	SSF56112	Protein kinase-like (PK-like)
Rpdx1_4493	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_4494	SSF143120	YefM-like
Rpdx1_4495	SSF88723	PIN domain-like
Rpdx1_4497	SSF54975	Acylphosphatase/BLUF domain-like
Rpdx1_4498	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_4498	SSF53850	Periplasmic binding protein-like II
Rpdx1_4499	SSF101874	YceI-like
Rpdx1_4500	SSF55469	FMN-dependent nitroreductase-like
Rpdx1_4501	SSF53213	LigB-like
Rpdx1_4502	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_4504	SSF52799	(Phosphotyrosine protein) phosphatases II
Rpdx1_4506	SSF56918	Light-harvesting complex subunits
Rpdx1_4507	SSF56918	Light-harvesting complex subunits
Rpdx1_4510	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4511	SSF141371	PilZ domain-like
Rpdx1_4512	SSF51430	NAD(P)-linked oxidoreductase
Rpdx1_4513	SSF55826	YbaK/ProRS associated domain
Rpdx1_4514	SSF103481	Multidrug resistance efflux transporter EmrE
Rpdx1_4515	SSF54909	Dimeric alpha+beta barrel
Rpdx1_4516	SSF103481	Multidrug resistance efflux transporter EmrE
Rpdx1_4517	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_4518	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_4519	SSF47240	Ferritin-like
Rpdx1_4522	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_4523	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_4524	SSF143548	Serine metabolism enzymes domain
Rpdx1_4524	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4524	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Rpdx1_4524	SSF55021	ACT-like
Rpdx1_4525	SSF53383	PLP-dependent transferases
Rpdx1_4526	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_4527	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_4528	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_4529	SSF47616	GST C-terminal domain-like
Rpdx1_4529	SSF52833	Thioredoxin-like
Rpdx1_4530	SSF56925	OMPA-like
Rpdx1_4531	SSF56925	OMPA-like
Rpdx1_4532	SSF103473	MFS general substrate transporter
Rpdx1_4533	SSF53738	Phosphoglucomutase, first 3 domains
Rpdx1_4533	SSF55957	Phosphoglucomutase, C-terminal domain
Rpdx1_4535	SSF51395	FMN-linked oxidoreductases
Rpdx1_4536	SSF52096	ClpP/crotonase
Rpdx1_4538	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4538	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Rpdx1_4539	SSF52091	SpoIIaa-like
Rpdx1_4540	SSF47413	lambda repressor-like DNA-binding domains
Rpdx1_4541	SSF50447	Translation proteins
Rpdx1_4541	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4541	SSF54211	Ribosomal protein S5 domain 2-like
Rpdx1_4541	SSF54980	EF-G C-terminal domain-like
Rpdx1_4544	SSF53383	PLP-dependent transferases
Rpdx1_4545	SSF47616	GST C-terminal domain-like
Rpdx1_4545	SSF52833	Thioredoxin-like
Rpdx1_4547	SSF50952	Soluble quinoprotein glucose dehydrogenase
Rpdx1_4548	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Rpdx1_4549	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4550	SSF51430	NAD(P)-linked oxidoreductase
Rpdx1_4552	SSF56784	HAD-like
Rpdx1_4553	SSF46689	Homeodomain-like
Rpdx1_4553	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_4554	SSF52096	ClpP/crotonase
Rpdx1_4555	SSF47616	GST C-terminal domain-like
Rpdx1_4555	SSF52833	Thioredoxin-like
Rpdx1_4556	SSF55718	SCP-like
Rpdx1_4556	SSF56281	Metallo-hydrolase/oxidoreductase
Rpdx1_4558	SSF46600	C-terminal UvrC-binding domain of UvrB
Rpdx1_4558	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4559	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_4561	SSF88723	PIN domain-like
Rpdx1_4564	SSF53901	Thiolase-like
Rpdx1_4566	SSF54427	NTF2-like
Rpdx1_4569	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_4570	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_4572	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4572	SSF81271	TGS-like
Rpdx1_4573	SSF53178	Peptidyl-tRNA hydrolase-like
Rpdx1_4574	SSF50715	Ribosomal protein L25-like
Rpdx1_4577	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_4578	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
Rpdx1_4580	SSF53271	PRTase-like
Rpdx1_4581	SSF52121	Lumazine synthase
Rpdx1_4583	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Rpdx1_4583	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4584	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_4584	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_4585	SSF46894	C-terminal effector domain of the bipartite response regulators
Rpdx1_4585	SSF52172	CheY-like
Rpdx1_4586	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_4587	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
Rpdx1_4588	SSF118116	DNA mismatch repair protein MutL
Rpdx1_4588	SSF54211	Ribosomal protein S5 domain 2-like
Rpdx1_4588	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_4589	SSF110916	Peptidyl-tRNA hydrolase domain-like
Rpdx1_4590	SSF63411	LuxS/MPP-like metallohydrolase
Rpdx1_4591	SSF63411	LuxS/MPP-like metallohydrolase
Rpdx1_4594	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Rpdx1_4594	SSF50677	ValRS/IleRS/LeuRS editing domain
Rpdx1_4594	SSF52374	Nucleotidylyl transferase
Rpdx1_4596	SSF51161	Trimeric LpxA-like enzymes
Rpdx1_4597	SSF52374	Nucleotidylyl transferase
Rpdx1_4597	SSF82114	Riboflavin kinase-like
Rpdx1_4598	SSF55895	Ribonuclease Rh-like
Rpdx1_4603	SSF56935	Porins
Rpdx1_4604	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_4605	SSF50182	Sm-like ribonucleoproteins
Rpdx1_4605	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
Rpdx1_4605	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
Rpdx1_4606	SSF55811	Nudix
Rpdx1_4607	SSF56300	Metallo-dependent phosphatases
Rpdx1_4610	SSF51621	Phosphoenolpyruvate/pyruvate domain
Rpdx1_4611	SSF47413	lambda repressor-like DNA-binding domains
Rpdx1_4613	SSF47090	PGBD-like
Rpdx1_4613	SSF53955	Lysozyme-like
Rpdx1_4614	SSF53822	Periplasmic binding protein-like I
Rpdx1_4615	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4617	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4622	SSF51395	FMN-linked oxidoreductases
Rpdx1_4625	SSF161098	MetI-like
Rpdx1_4626	SSF161098	MetI-like
Rpdx1_4627	SSF50331	MOP-like
Rpdx1_4627	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4628	SSF50331	MOP-like
Rpdx1_4628	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4629	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_4630	SSF100950	NagB/RpiA/CoA transferase-like
Rpdx1_4630	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_4631	SSF50475	FMN-binding split barrel
Rpdx1_4632	SSF46689	Homeodomain-like
Rpdx1_4632	SSF48498	Tetracyclin repressor-like, C-terminal domain
Rpdx1_4633	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Rpdx1_4633	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Rpdx1_4633	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Rpdx1_4634	SSF111369	HlyD-like secretion proteins
Rpdx1_4635	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Rpdx1_4635	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_4635	SSF52172	CheY-like
Rpdx1_4635	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_4635	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_4636	SSF69047	Hypothetical protein YjbJ
Rpdx1_4637	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Rpdx1_4638	SSF144266	MPN010-like
Rpdx1_4639	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_4640	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_4640	SSF51206	cAMP-binding domain-like
Rpdx1_4642	SSF56281	Metallo-hydrolase/oxidoreductase
Rpdx1_4643	SSF56529	FAH
Rpdx1_4644	SSF47616	GST C-terminal domain-like
Rpdx1_4644	SSF52833	Thioredoxin-like
Rpdx1_4645	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
Rpdx1_4645	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
Rpdx1_4646	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_4648	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Rpdx1_4649	SSF51261	Duplicated hybrid motif
Rpdx1_4650	SSF63829	Calcium-dependent phosphotriesterase
Rpdx1_4651	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4651	SSF81923	Double Clp-N motif
Rpdx1_4652	SSF50800	PK beta-barrel domain-like
Rpdx1_4653	SSF54001	Cysteine proteinases
Rpdx1_4654	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_4655	SSF53474	alpha/beta-Hydrolases
Rpdx1_4656	SSF48600	Chorismate mutase II
Rpdx1_4657	SSF53383	PLP-dependent transferases
Rpdx1_4658	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Rpdx1_4658	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4659	SSF143865	CorA soluble domain-like
Rpdx1_4659	SSF144083	Magnesium transport protein CorA, transmembrane region
Rpdx1_4660	SSF141523	L,D-transpeptidase catalytic domain-like
Rpdx1_4662	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_4667	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Rpdx1_4667	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Rpdx1_4669	SSF158472	HAMP domain-like
Rpdx1_4669	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_4670	SSF53383	PLP-dependent transferases
Rpdx1_4671	SSF56059	Glutathione synthetase ATP-binding domain-like
Rpdx1_4672	SSF53383	PLP-dependent transferases
Rpdx1_4673	SSF56300	Metallo-dependent phosphatases
Rpdx1_4674	SSF100950	NagB/RpiA/CoA transferase-like
Rpdx1_4678	SSF52821	Rhodanese/Cell cycle control phosphatase
Rpdx1_4681	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Rpdx1_4681	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Rpdx1_4681	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Rpdx1_4682	SSF111369	HlyD-like secretion proteins
Rpdx1_4683	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_4684	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_4685	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_4686	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_4687	SSF48150	DNA-glycosylase
Rpdx1_4687	SSF55811	Nudix
Rpdx1_4689	SSF52833	Thioredoxin-like
Rpdx1_4690	SSF47413	lambda repressor-like DNA-binding domains
Rpdx1_4692	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4692	SSF75553	Smc hinge domain
Rpdx1_4693	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_4694	SSF140478	LemA-like
Rpdx1_4696	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4698	SSF53271	PRTase-like
Rpdx1_4699	SSF52317	Class I glutamine amidotransferase-like
Rpdx1_4699	SSF56322	ADC synthase
Rpdx1_4700	SSF54786	YcfA/nrd intein domain
Rpdx1_4701	SSF143100	TTHA1013/TTHA0281-like
Rpdx1_4702	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_4703	SSF56112	Protein kinase-like (PK-like)
Rpdx1_4705	SSF82057	Prokaryotic SH3-related domain
Rpdx1_4706	SSF56925	OMPA-like
Rpdx1_4708	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_4709	SSF48452	TPR-like
Rpdx1_4710	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4711	SSF102114	Radical SAM enzymes
Rpdx1_4714	SSF53850	Periplasmic binding protein-like II
Rpdx1_4715	SSF103473	MFS general substrate transporter
Rpdx1_4716	SSF52172	CheY-like
Rpdx1_4717	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_4717	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_4718	SSF56300	Metallo-dependent phosphatases
Rpdx1_4719	SSF53850	Periplasmic binding protein-like II
Rpdx1_4720	SSF141868	EAL domain-like
Rpdx1_4720	SSF52172	CheY-like
Rpdx1_4724	SSF55811	Nudix
Rpdx1_4725	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_4726	SSF56784	HAD-like
Rpdx1_4727	SSF52172	CheY-like
Rpdx1_4728	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_4729	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Rpdx1_4730	SSF52972	ITPase-like
Rpdx1_4731	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4732	SSF52788	Phosphotyrosine protein phosphatases I
Rpdx1_4734	SSF53720	ALDH-like
Rpdx1_4736	SSF55205	EPT/RTPC-like
Rpdx1_4740	SSF54427	NTF2-like
Rpdx1_4741	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_4741	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_4742	SSF51621	Phosphoenolpyruvate/pyruvate domain
Rpdx1_4743	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
Rpdx1_4744	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Rpdx1_4744	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4745	SSF50199	Staphylococcal nuclease
Rpdx1_4746	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_4747	SSF55073	Nucleotide cyclase
Rpdx1_4748	SSF53067	Actin-like ATPase domain
Rpdx1_4749	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Rpdx1_4749	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_4750	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4751	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4754	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_4756	SSF50156	PDZ domain-like
Rpdx1_4756	SSF50494	Trypsin-like serine proteases
Rpdx1_4759	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4762	SSF53822	Periplasmic binding protein-like I
Rpdx1_4763	SSF50156	PDZ domain-like
Rpdx1_4763	SSF50494	Trypsin-like serine proteases
Rpdx1_4766	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4768	SSF51445	(Trans)glycosidases
Rpdx1_4771	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_4772	SSF75005	Arabinanase/levansucrase/invertase
Rpdx1_4775	SSF52317	Class I glutamine amidotransferase-like
Rpdx1_4777	SSF51182	RmlC-like cupins
Rpdx1_4779	SSF54862	4Fe-4S ferredoxins
Rpdx1_4780	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_4780	SSF54373	FAD-linked reductases, C-terminal domain
Rpdx1_4781	SSF52402	Adenine nucleotide alpha hydrolases-like
Rpdx1_4781	SSF52467	DHS-like NAD/FAD-binding domain
Rpdx1_4782	SSF52402	Adenine nucleotide alpha hydrolases-like
Rpdx1_4785	SSF51569	Aldolase
Rpdx1_4786	SSF53383	PLP-dependent transferases
Rpdx1_4787	SSF117916	Fe-S cluster assembly (FSCA) domain-like
Rpdx1_4787	SSF82649	SufE/NifU
Rpdx1_4788	SSF89360	HesB-like domain
Rpdx1_4790	SSF54862	4Fe-4S ferredoxins
Rpdx1_4793	SSF53146	Nitrogenase accessory factor-like
Rpdx1_4794	SSF53807	"Helical backbone" metal receptor
Rpdx1_4795	SSF53807	"Helical backbone" metal receptor
Rpdx1_4796	SSF53807	"Helical backbone" metal receptor
Rpdx1_4797	SSF53807	"Helical backbone" metal receptor
Rpdx1_4798	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4801	SSF159203	NifT/FixU-like
Rpdx1_4804	SSF48371	ARM repeat
Rpdx1_4805	SSF48452	TPR-like
Rpdx1_4806	SSF89360	HesB-like domain
Rpdx1_4807	SSF54862	4Fe-4S ferredoxins
Rpdx1_4808	SSF102114	Radical SAM enzymes
Rpdx1_4808	SSF53146	Nitrogenase accessory factor-like
Rpdx1_4809	SSF54862	4Fe-4S ferredoxins
Rpdx1_4810	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4810	SSF55781	GAF domain-like
Rpdx1_4811	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4813	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4814	SSF50037	C-terminal domain of transcriptional repressors
Rpdx1_4816	SSF158472	HAMP domain-like
Rpdx1_4816	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_4819	SSF51649	RuBisCo, C-terminal domain
Rpdx1_4819	SSF54966	RuBisCO, large subunit, small (N-terminal) domain
Rpdx1_4820	SSF51569	Aldolase
Rpdx1_4821	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Rpdx1_4821	SSF52922	TK C-terminal domain-like
Rpdx1_4822	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4823	SSF56655	Carbohydrate phosphatase
Rpdx1_4824	SSF53474	alpha/beta-Hydrolases
Rpdx1_4826	SSF64518	Phase 1 flagellin
Rpdx1_4829	SSF117143	Flagellar hook protein flgE
Rpdx1_4832	SSF101116	Flagellar export chaperone FliS
Rpdx1_4834	SSF64518	Phase 1 flagellin
Rpdx1_4835	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Rpdx1_4835	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Rpdx1_4837	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_4838	SSF56784	HAD-like
Rpdx1_4839	SSF103473	MFS general substrate transporter
Rpdx1_4840	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_4842	SSF47741	CO dehydrogenase ISP C-domain like
Rpdx1_4842	SSF54292	2Fe-2S ferredoxin-like
Rpdx1_4843	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
Rpdx1_4843	SSF56003	Molybdenum cofactor-binding domain
Rpdx1_4844	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
Rpdx1_4844	SSF56176	FAD-binding/transporter-associated domain-like
Rpdx1_4845	SSF89796	CoA-transferase family III (CaiB/BaiF)
Rpdx1_4846	SSF56529	FAH
Rpdx1_4846	SSF63433	Fumarylacetoacetate hydrolase, FAH, N-terminal domain
Rpdx1_4848	SSF47616	GST C-terminal domain-like
Rpdx1_4848	SSF52833	Thioredoxin-like
Rpdx1_4849	SSF51182	RmlC-like cupins
Rpdx1_4850	SSF56281	Metallo-hydrolase/oxidoreductase
Rpdx1_4852	SSF51905	FAD/NAD(P)-binding domain
Rpdx1_4853	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_4854	SSF48452	TPR-like
Rpdx1_4854	SSF52129	Caspase-like
Rpdx1_4855	SSF103088	OmpA-like
Rpdx1_4856	SSF51230	Single hybrid motif
Rpdx1_4857	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Rpdx1_4857	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Rpdx1_4857	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Rpdx1_4861	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
Rpdx1_4861	SSF52374	Nucleotidylyl transferase
Rpdx1_4862	SSF53850	Periplasmic binding protein-like II
Rpdx1_4863	SSF53448	Nucleotide-diphospho-sugar transferases
Rpdx1_4864	SSF52833	Thioredoxin-like
Rpdx1_4866	SSF158472	HAMP domain-like
Rpdx1_4866	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Rpdx1_4868	SSF51395	FMN-linked oxidoreductases
Rpdx1_4869	SSF53850	Periplasmic binding protein-like II
Rpdx1_4870	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_4870	SSF53850	Periplasmic binding protein-like II
Rpdx1_4871	SSF54506	Diaminopimelate epimerase-like
Rpdx1_4872	SSF51556	Metallo-dependent hydrolases
Rpdx1_4873	SSF89562	RraA-like
Rpdx1_4874	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Rpdx1_4874	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4875	SSF51556	Metallo-dependent hydrolases
Rpdx1_4876	SSF48076	LigA subunit of an aromatic-ring-opening dioxygenase LigAB
Rpdx1_4877	SSF53213	LigB-like
Rpdx1_4878	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4878	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Rpdx1_4880	SSF101386	all-alpha NTP pyrophosphatases
Rpdx1_4883	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
Rpdx1_4884	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_4887	SSF46894	C-terminal effector domain of the bipartite response regulators
Rpdx1_4887	SSF48452	TPR-like
Rpdx1_4888	SSF52743	Subtilisin-like
Rpdx1_4890	SSF50331	MOP-like
Rpdx1_4890	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4891	SSF161098	MetI-like
Rpdx1_4892	SSF53850	Periplasmic binding protein-like II
Rpdx1_4893	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_4893	SSF50331	MOP-like
Rpdx1_4894	SSF50331	MOP-like
Rpdx1_4896	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Rpdx1_4896	SSF52922	TK C-terminal domain-like
Rpdx1_4896	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
Rpdx1_4896	SSF54862	4Fe-4S ferredoxins
Rpdx1_4897	SSF46548	alpha-helical ferredoxin
Rpdx1_4897	SSF51971	Nucleotide-binding domain
Rpdx1_4897	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Rpdx1_4897	SSF63380	Riboflavin synthase domain-like
Rpdx1_4899	SSF47807	5' to 3' exonuclease, C-terminal subdomain
Rpdx1_4899	SSF53098	Ribonuclease H-like
Rpdx1_4899	SSF56672	DNA/RNA polymerases
Rpdx1_4899	SSF88723	PIN domain-like
Rpdx1_4900	SSF53271	PRTase-like
Rpdx1_4903	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Rpdx1_4904	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Rpdx1_4905	SSF52768	Arginase/deacetylase
Rpdx1_4906	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4908	SSF110857	Gamma-glutamyl cyclotransferase-like
Rpdx1_4909	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Rpdx1_4912	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4914	SSF52172	CheY-like
Rpdx1_4916	SSF69118	AhpD-like
Rpdx1_4917	SSF50621	Alanine racemase C-terminal domain-like
Rpdx1_4917	SSF51419	PLP-binding barrel
Rpdx1_4919	SSF48557	L-aspartase-like
Rpdx1_4920	SSF52833	Thioredoxin-like
Rpdx1_4921	SSF54909	Dimeric alpha+beta barrel
Rpdx1_4923	SSF52218	Flavoproteins
Rpdx1_4924	SSF46785	"Winged helix" DNA-binding domain
Rpdx1_4924	SSF53850	Periplasmic binding protein-like II
Rpdx1_4925	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Rpdx1_4925	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4926	SSF52402	Adenine nucleotide alpha hydrolases-like
Rpdx1_4926	SSF52467	DHS-like NAD/FAD-binding domain
Rpdx1_4927	SSF52402	Adenine nucleotide alpha hydrolases-like
Rpdx1_4928	SSF89028	Cobalamin adenosyltransferase-like
Rpdx1_4931	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_4931	SSF52172	CheY-like
Rpdx1_4931	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_4932	SSF52374	Nucleotidylyl transferase
Rpdx1_4933	SSF48150	DNA-glycosylase
Rpdx1_4934	SSF47598	Ribbon-helix-helix
Rpdx1_4934	SSF55021	ACT-like
Rpdx1_4935	SSF56935	Porins
Rpdx1_4936	SSF50346	PRC-barrel domain
Rpdx1_4937	SSF51011	Glycosyl hydrolase domain
Rpdx1_4937	SSF51445	(Trans)glycosidases
Rpdx1_4943	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
Rpdx1_4943	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
Rpdx1_4946	SSF50952	Soluble quinoprotein glucose dehydrogenase
Rpdx1_4947	SSF52980	Restriction endonuclease-like
Rpdx1_4948	SSF51283	dUTPase-like
Rpdx1_4949	SSF53383	PLP-dependent transferases
Rpdx1_4950	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_4950	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_4951	SSF46894	C-terminal effector domain of the bipartite response regulators
Rpdx1_4951	SSF52172	CheY-like
Rpdx1_4952	SSF52833	Thioredoxin-like
Rpdx1_4952	SSF74863	Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
Rpdx1_4953	SSF52833	Thioredoxin-like
Rpdx1_4954	SSF141523	L,D-transpeptidase catalytic domain-like
Rpdx1_4955	SSF52266	SGNH hydrolase
Rpdx1_4956	SSF52266	SGNH hydrolase
Rpdx1_4958	SSF110069	ApaG-like
Rpdx1_4960	SSF118352	HSP33 redox switch-like
Rpdx1_4960	SSF64397	Hsp33 domain
Rpdx1_4961	SSF53671	Aspartate/ornithine carbamoyltransferase
Rpdx1_4962	SSF53383	PLP-dependent transferases
Rpdx1_4964	SSF46894	C-terminal effector domain of the bipartite response regulators
Rpdx1_4964	SSF52172	CheY-like
Rpdx1_4965	SSF109755	PhoU-like
Rpdx1_4966	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4967	SSF161098	MetI-like
Rpdx1_4968	SSF161098	MetI-like
Rpdx1_4969	SSF53850	Periplasmic binding protein-like II
Rpdx1_4970	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_4970	SSF55785	PYP-like sensor domain (PAS domain)
Rpdx1_4970	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_4973	SSF103088	OmpA-like
Rpdx1_4974	SSF88713	Glycoside hydrolase/deacetylase
Rpdx1_4975	SSF51735	NAD(P)-binding Rossmann-fold domains
Rpdx1_4976	SSF47413	lambda repressor-like DNA-binding domains
Rpdx1_4976	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4977	SSF53850	Periplasmic binding protein-like II
Rpdx1_4978	SSF158472	HAMP domain-like
Rpdx1_4978	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_4979	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_4979	SSF52172	CheY-like
Rpdx1_4979	SSF55781	GAF domain-like
Rpdx1_4979	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_4980	SSF46894	C-terminal effector domain of the bipartite response regulators
Rpdx1_4980	SSF52172	CheY-like
Rpdx1_4981	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Rpdx1_4981	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Rpdx1_4984	SSF141523	L,D-transpeptidase catalytic domain-like
Rpdx1_4985	SSF53850	Periplasmic binding protein-like II
Rpdx1_4986	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_4986	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_4987	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Rpdx1_4987	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Rpdx1_4988	SSF69118	AhpD-like
Rpdx1_4990	SSF103473	MFS general substrate transporter
Rpdx1_4991	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Rpdx1_4992	SSF56935	Porins
Rpdx1_4995	SSF53822	Periplasmic binding protein-like I
Rpdx1_4996	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_4998	SSF159245	AttH-like
Rpdx1_4999	SSF161084	MAPEG domain-like
Rpdx1_5000	SSF53822	Periplasmic binding protein-like I
Rpdx1_5001	SSF56925	OMPA-like
Rpdx1_5001	SSF69917	OMPT-like
Rpdx1_5002	SSF110942	HSP90 C-terminal domain
Rpdx1_5002	SSF54211	Ribosomal protein S5 domain 2-like
Rpdx1_5002	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_5003	SSF47384	Homodimeric domain of signal transducing histidine kinase
Rpdx1_5003	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Rpdx1_5004	SSF52172	CheY-like
Rpdx1_5007	SSF100950	NagB/RpiA/CoA transferase-like
Rpdx1_5008	SSF53167	Purine and uridine phosphorylases
Rpdx1_5009	SSF56796	Dehydroquinate synthase-like
Rpdx1_5010	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_5011	SSF47819	HRDC-like
Rpdx1_5011	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Rpdx1_5014	SSF56801	Acetyl-CoA synthetase-like
Rpdx1_5015	SSF109604	HD-domain/PDEase-like
Rpdx1_5015	SSF52172	CheY-like
Rpdx1_5017	SSF53474	alpha/beta-Hydrolases
Rpdx1_5019	SSF55068	Peptide methionine sulfoxide reductase
Rpdx1_5021	SSF46992	Ribosomal protein S20