RPB_0016	PWY-3781	aerobic respiration I (cytochrome c)
RPB_0016	PWY-4521	arsenite oxidation I (respiratory)
RPB_0016	PWY-6692	Fe(II) oxidation
RPB_0016	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPB_0017	PWY-3781	aerobic respiration I (cytochrome c)
RPB_0017	PWY-4521	arsenite oxidation I (respiratory)
RPB_0017	PWY-6692	Fe(II) oxidation
RPB_0017	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPB_0018	PWY-6654	phosphopantothenate biosynthesis III
RPB_0029	PWY-6502	oxidized GTP and dGTP detoxification
RPB_0030	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPB_0069	PWY-5386	methylglyoxal degradation I
RPB_0077	PWY-2941	L-lysine biosynthesis II
RPB_0077	PWY-2942	L-lysine biosynthesis III
RPB_0077	PWY-5097	L-lysine biosynthesis VI
RPB_0077	PWY-6559	spermidine biosynthesis II
RPB_0077	PWY-6562	norspermidine biosynthesis
RPB_0077	PWY-7153	grixazone biosynthesis
RPB_0079	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
RPB_0079	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
RPB_0079	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
RPB_0079	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
RPB_0079	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
RPB_0079	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
RPB_0079	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
RPB_0079	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
RPB_0079	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
RPB_0079	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
RPB_0082	PWY-4041	&gamma;-glutamyl cycle
RPB_0082	PWY-5826	hypoglycin biosynthesis
RPB_0084	PWY-6123	inosine-5'-phosphate biosynthesis I
RPB_0084	PWY-6124	inosine-5'-phosphate biosynthesis II
RPB_0084	PWY-7234	inosine-5'-phosphate biosynthesis III
RPB_0089	PWY-5491	diethylphosphate degradation
RPB_0090	PWY-4983	L-citrulline-nitric oxide cycle
RPB_0090	PWY-4984	urea cycle
RPB_0090	PWY-5	canavanine biosynthesis
RPB_0090	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPB_0090	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPB_0099	PWY-7158	L-phenylalanine degradation V
RPB_0108	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
RPB_0108	PWY-2201	folate transformations I
RPB_0108	PWY-3841	folate transformations II
RPB_0108	PWY-5030	L-histidine degradation III
RPB_0108	PWY-5497	purine nucleobases degradation II (anaerobic)
RPB_0108	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
RPB_0155	PWY-3781	aerobic respiration I (cytochrome c)
RPB_0155	PWY-4521	arsenite oxidation I (respiratory)
RPB_0155	PWY-6692	Fe(II) oxidation
RPB_0155	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPB_0200	PWY-6698	oxalate degradation V
RPB_0218	PWY-6654	phosphopantothenate biosynthesis III
RPB_0220	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPB_0228	PWY-4381	fatty acid biosynthesis initiation I
RPB_0228	PWY-5743	3-hydroxypropanoate cycle
RPB_0228	PWY-5744	glyoxylate assimilation
RPB_0228	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPB_0228	PWY-6679	jadomycin biosynthesis
RPB_0228	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPB_0241	PWY-3781	aerobic respiration I (cytochrome c)
RPB_0241	PWY-4521	arsenite oxidation I (respiratory)
RPB_0241	PWY-6692	Fe(II) oxidation
RPB_0241	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPB_0241	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
RPB_0254	PWY-5381	pyridine nucleotide cycling (plants)
RPB_0254	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
RPB_0265	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPB_0267	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPB_0274	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
RPB_0274	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RPB_0277	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RPB_0278	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RPB_0279	PWY-5392	reductive TCA cycle II
RPB_0279	PWY-5537	pyruvate fermentation to acetate V
RPB_0279	PWY-5538	pyruvate fermentation to acetate VI
RPB_0279	PWY-5690	TCA cycle II (plants and fungi)
RPB_0279	PWY-5913	TCA cycle VI (obligate autotrophs)
RPB_0279	PWY-6728	methylaspartate cycle
RPB_0279	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPB_0279	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPB_0280	PWY-5392	reductive TCA cycle II
RPB_0280	PWY-5537	pyruvate fermentation to acetate V
RPB_0280	PWY-5538	pyruvate fermentation to acetate VI
RPB_0280	PWY-5690	TCA cycle II (plants and fungi)
RPB_0280	PWY-5913	TCA cycle VI (obligate autotrophs)
RPB_0280	PWY-6728	methylaspartate cycle
RPB_0280	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPB_0280	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPB_0281	PWY-1622	formaldehyde assimilation I (serine pathway)
RPB_0281	PWY-5392	reductive TCA cycle II
RPB_0281	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPB_0281	PWY-5690	TCA cycle II (plants and fungi)
RPB_0281	PWY-5913	TCA cycle VI (obligate autotrophs)
RPB_0281	PWY-6728	methylaspartate cycle
RPB_0281	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPB_0281	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPB_0281	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPB_0300	PWY-5532	adenosine nucleotides degradation IV
RPB_0300	PWY-5723	Rubisco shunt
RPB_0306	PWY-5350	thiosulfate disproportionation III (rhodanese)
RPB_0314	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPB_0314	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPB_0316	PWY-5667	CDP-diacylglycerol biosynthesis I
RPB_0316	PWY-5981	CDP-diacylglycerol biosynthesis III
RPB_0319	PWY-6672	<i>cis</i>-genanyl-CoA degradation
RPB_0319	PWY-7118	chitin degradation to ethanol
RPB_0323	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RPB_0323	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RPB_0324	PWY-3781	aerobic respiration I (cytochrome c)
RPB_0324	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RPB_0324	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPB_0324	PWY-5690	TCA cycle II (plants and fungi)
RPB_0324	PWY-6728	methylaspartate cycle
RPB_0324	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPB_0324	PWY-7254	TCA cycle VII (acetate-producers)
RPB_0324	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPB_0325	PWY-3781	aerobic respiration I (cytochrome c)
RPB_0325	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RPB_0325	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPB_0325	PWY-5690	TCA cycle II (plants and fungi)
RPB_0325	PWY-6728	methylaspartate cycle
RPB_0325	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPB_0325	PWY-7254	TCA cycle VII (acetate-producers)
RPB_0325	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPB_0335	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RPB_0338	PWY-2941	L-lysine biosynthesis II
RPB_0338	PWY-2942	L-lysine biosynthesis III
RPB_0338	PWY-5097	L-lysine biosynthesis VI
RPB_0338	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPB_0338	PWY-6559	spermidine biosynthesis II
RPB_0338	PWY-6562	norspermidine biosynthesis
RPB_0338	PWY-7153	grixazone biosynthesis
RPB_0338	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPB_0340	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPB_0340	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPB_0340	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPB_0340	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPB_0350	PWY-6829	tRNA methylation (yeast)
RPB_0350	PWY-7285	methylwyosine biosynthesis
RPB_0350	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
RPB_0359	PWY-2941	L-lysine biosynthesis II
RPB_0359	PWY-5097	L-lysine biosynthesis VI
RPB_0383	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPB_0393	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPB_0411	PWY-3961	phosphopantothenate biosynthesis II
RPB_0417	PWY-6157	autoinducer AI-1 biosynthesis
RPB_0424	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
RPB_0433	PWY-5686	UMP biosynthesis
RPB_0435	PWY-2941	L-lysine biosynthesis II
RPB_0435	PWY-2942	L-lysine biosynthesis III
RPB_0435	PWY-5097	L-lysine biosynthesis VI
RPB_0436	PWY-1042	glycolysis IV (plant cytosol)
RPB_0436	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RPB_0436	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPB_0436	PWY-5723	Rubisco shunt
RPB_0436	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPB_0436	PWY-6886	1-butanol autotrophic biosynthesis
RPB_0436	PWY-6901	superpathway of glucose and xylose degradation
RPB_0436	PWY-7003	glycerol degradation to butanol
RPB_0436	PWY-7124	ethylene biosynthesis V (engineered)
RPB_0436	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RPB_0441	PWY-622	starch biosynthesis
RPB_0442	PWY-622	starch biosynthesis
RPB_0461	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPB_0461	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPB_0476	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPB_0476	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPB_0477	PWY-6936	seleno-amino acid biosynthesis
RPB_0483	PWY-5381	pyridine nucleotide cycling (plants)
RPB_0483	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RPB_0483	PWY-6596	adenosine nucleotides degradation I
RPB_0483	PWY-6606	guanosine nucleotides degradation II
RPB_0483	PWY-6607	guanosine nucleotides degradation I
RPB_0483	PWY-6608	guanosine nucleotides degradation III
RPB_0483	PWY-7185	UTP and CTP dephosphorylation I
RPB_0508	PWY-5676	acetyl-CoA fermentation to butanoate II
RPB_0508	PWY-5741	ethylmalonyl-CoA pathway
RPB_0508	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RPB_0522	PWY-7560	methylerythritol phosphate pathway II
RPB_0525	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPB_0525	PWY-2361	3-oxoadipate degradation
RPB_0525	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
RPB_0532	PWY-4381	fatty acid biosynthesis initiation I
RPB_0532	PWY-5743	3-hydroxypropanoate cycle
RPB_0532	PWY-5744	glyoxylate assimilation
RPB_0532	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPB_0532	PWY-6679	jadomycin biosynthesis
RPB_0532	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPB_0535	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPB_0536	PWY-6164	3-dehydroquinate biosynthesis I
RPB_0541	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
RPB_0543	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
RPB_0564	PWY-2161	folate polyglutamylation
RPB_0569	PWY-6167	flavin biosynthesis II (archaea)
RPB_0607	PWY-6854	ethylene biosynthesis III (microbes)
RPB_0611	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPB_0611	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPB_0611	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPB_0611	PWY-6113	superpathway of mycolate biosynthesis
RPB_0611	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPB_0611	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPB_0611	PWY-7096	triclosan resistance
RPB_0611	PWYG-321	mycolate biosynthesis
RPB_0613	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPB_0613	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPB_0613	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPB_0613	PWY-5994	palmitate biosynthesis I (animals and fungi)
RPB_0613	PWY-6113	superpathway of mycolate biosynthesis
RPB_0613	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPB_0613	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPB_0613	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPB_0613	PWYG-321	mycolate biosynthesis
RPB_0620	PWY-5839	menaquinol-7 biosynthesis
RPB_0620	PWY-5844	menaquinol-9 biosynthesis
RPB_0620	PWY-5849	menaquinol-6 biosynthesis
RPB_0620	PWY-5890	menaquinol-10 biosynthesis
RPB_0620	PWY-5891	menaquinol-11 biosynthesis
RPB_0620	PWY-5892	menaquinol-12 biosynthesis
RPB_0620	PWY-5895	menaquinol-13 biosynthesis
RPB_0623	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RPB_0623	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPB_0623	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPB_0623	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
RPB_0632	PWY-2161	folate polyglutamylation
RPB_0633	PWY-4381	fatty acid biosynthesis initiation I
RPB_0633	PWY-5743	3-hydroxypropanoate cycle
RPB_0633	PWY-5744	glyoxylate assimilation
RPB_0633	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPB_0633	PWY-6679	jadomycin biosynthesis
RPB_0633	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPB_0641	PWY-7205	CMP phosphorylation
RPB_0643	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPB_0670	PWY-5381	pyridine nucleotide cycling (plants)
RPB_0680	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPB_0680	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPB_0691	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPB_0702	PWY-6123	inosine-5'-phosphate biosynthesis I
RPB_0702	PWY-6124	inosine-5'-phosphate biosynthesis II
RPB_0702	PWY-7234	inosine-5'-phosphate biosynthesis III
RPB_0721	PWY-5506	methanol oxidation to formaldehyde IV
RPB_0724	PWY-1881	formate oxidation to CO<sub>2</sub>
RPB_0724	PWY-5497	purine nucleobases degradation II (anaerobic)
RPB_0724	PWY-6696	oxalate degradation III
RPB_0737	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPB_0737	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPB_0737	PWY-6268	adenosylcobalamin salvage from cobalamin
RPB_0737	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPB_0740	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPB_0740	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPB_0740	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPB_0742	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPB_0742	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPB_0742	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPB_0743	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPB_0743	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
RPB_0784	PWY-4981	L-proline biosynthesis II (from arginine)
RPB_0784	PWY-4984	urea cycle
RPB_0784	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPB_0792	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPB_0818	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPB_0818	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPB_0818	PWY-6268	adenosylcobalamin salvage from cobalamin
RPB_0818	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPB_0821	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPB_0821	PWY-5109	2-methylbutanoate biosynthesis
RPB_0821	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RPB_0821	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RPB_0821	PWY-5177	glutaryl-CoA degradation
RPB_0821	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPB_0821	PWY-6435	4-hydroxybenzoate biosynthesis V
RPB_0821	PWY-6583	pyruvate fermentation to butanol I
RPB_0821	PWY-6863	pyruvate fermentation to hexanol
RPB_0821	PWY-6883	pyruvate fermentation to butanol II
RPB_0821	PWY-6944	androstenedione degradation
RPB_0821	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RPB_0821	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RPB_0821	PWY-7007	methyl ketone biosynthesis
RPB_0821	PWY-7046	4-coumarate degradation (anaerobic)
RPB_0821	PWY-7094	fatty acid salvage
RPB_0821	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RPB_0821	PWY-735	jasmonic acid biosynthesis
RPB_0821	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RPB_0827	PWY-4983	L-citrulline-nitric oxide cycle
RPB_0827	PWY-4984	urea cycle
RPB_0827	PWY-5	canavanine biosynthesis
RPB_0827	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPB_0827	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPB_0829	PWY-2941	L-lysine biosynthesis II
RPB_0829	PWY-2942	L-lysine biosynthesis III
RPB_0829	PWY-5097	L-lysine biosynthesis VI
RPB_0842	PWY-31	canavanine degradation
RPB_0842	PWY-4984	urea cycle
RPB_0842	PWY-6305	putrescine biosynthesis IV
RPB_0842	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RPB_0844	PWY-5941	glycogen degradation II (eukaryotic)
RPB_0844	PWY-622	starch biosynthesis
RPB_0844	PWY-6731	starch degradation III
RPB_0844	PWY-6737	starch degradation V
RPB_0844	PWY-7238	sucrose biosynthesis II
RPB_0847	PWY-5686	UMP biosynthesis
RPB_0866	PWY-723	alkylnitronates degradation
RPB_0873	PWY-6216	3-chlorobenzoate degradation II (via protocatechuate)
RPB_0873	PWY-6217	3,4-dichlorobenzoate degradation
RPB_0888	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPB_0940	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPB_0947	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPB_0948	PWY-5723	Rubisco shunt
RPB_0949	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPB_0949	PWY-5723	Rubisco shunt
RPB_0949	PWY-6891	thiazole biosynthesis II (Bacillus)
RPB_0949	PWY-6892	thiazole biosynthesis I (E. coli)
RPB_0949	PWY-6901	superpathway of glucose and xylose degradation
RPB_0949	PWY-7560	methylerythritol phosphate pathway II
RPB_0950	PWY-1042	glycolysis IV (plant cytosol)
RPB_0950	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPB_0950	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPB_0950	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPB_0950	PWY-7385	1,3-propanediol biosynthesis (engineered)
RPB_0951	PWY-5532	adenosine nucleotides degradation IV
RPB_0951	PWY-5723	Rubisco shunt
RPB_0959	PWY-6823	molybdenum cofactor biosynthesis
RPB_0981	PWY-6823	molybdenum cofactor biosynthesis
RPB_0981	PWY-6891	thiazole biosynthesis II (Bacillus)
RPB_0981	PWY-6892	thiazole biosynthesis I (E. coli)
RPB_0981	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RPB_0982	PWY-3081	L-lysine biosynthesis V
RPB_0982	PWY-6871	3-methylbutanol biosynthesis
RPB_0990	PWY-5692	allantoin degradation to glyoxylate II
RPB_0990	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
RPB_1000	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RPB_1000	PWY-5143	long-chain fatty acid activation
RPB_1000	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
RPB_1000	PWY-5885	wax esters biosynthesis II
RPB_1000	PWY-5972	stearate biosynthesis I (animals and fungi)
RPB_1000	PWY-5995	linoleate biosynthesis I (plants)
RPB_1000	PWY-6000	&gamma;-linolenate biosynthesis II (animals)
RPB_1000	PWY-6001	linoleate biosynthesis II (animals)
RPB_1000	PWY-6803	phosphatidylcholine acyl editing
RPB_1000	PWY-6873	long chain fatty acid ester synthesis for microdiesel production
RPB_1000	PWY-6920	6-gingerol analog biosynthesis
RPB_1000	PWY-6951	RPB_1000
RPB_1000	PWY-7033	alkane biosynthesis II
RPB_1000	PWY-7035	(<i>Z</i>)-9-tricosene biosynthesis
RPB_1000	PWY-7049	icosapentaenoate biosynthesis II (metazoa)
RPB_1000	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
RPB_1000	PWY-7094	fatty acid salvage
RPB_1000	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
RPB_1001	PWY-5344	L-homocysteine biosynthesis
RPB_1001	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RPB_1012	PWY-3821	galactose degradation III
RPB_1012	PWY-6317	galactose degradation I (Leloir pathway)
RPB_1012	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RPB_1012	PWY-6527	stachyose degradation
RPB_1012	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
RPB_1012	PWY-7344	UDP-D-galactose biosynthesis
RPB_1025	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPB_1025	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPB_1025	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPB_1025	PWY-6113	superpathway of mycolate biosynthesis
RPB_1025	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPB_1025	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPB_1025	PWY-7096	triclosan resistance
RPB_1025	PWYG-321	mycolate biosynthesis
RPB_1026	PWY-1281	sulfoacetaldehyde degradation I
RPB_1026	PWY-5482	pyruvate fermentation to acetate II
RPB_1026	PWY-5485	pyruvate fermentation to acetate IV
RPB_1026	PWY-5497	purine nucleobases degradation II (anaerobic)
RPB_1026	PWY-6637	sulfolactate degradation II
RPB_1027	PWY-5482	pyruvate fermentation to acetate II
RPB_1027	PWY-5485	pyruvate fermentation to acetate IV
RPB_1027	PWY-5497	purine nucleobases degradation II (anaerobic)
RPB_1034	PWY-5941	glycogen degradation II (eukaryotic)
RPB_1034	PWY-6724	starch degradation II
RPB_1034	PWY-6737	starch degradation V
RPB_1034	PWY-7238	sucrose biosynthesis II
RPB_1042	PWY-5340	sulfate activation for sulfonation
RPB_1056	PWY-5381	pyridine nucleotide cycling (plants)
RPB_1086	PWY-7560	methylerythritol phosphate pathway II
RPB_1099	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPB_1099	PWY-6549	L-glutamine biosynthesis III
RPB_1099	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPB_1099	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPB_1105	PWY-5316	nicotine biosynthesis
RPB_1105	PWY-5381	pyridine nucleotide cycling (plants)
RPB_1105	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
RPB_1105	PWY-7342	superpathway of nicotine biosynthesis
RPB_1106	PWY-5316	nicotine biosynthesis
RPB_1106	PWY-7342	superpathway of nicotine biosynthesis
RPB_1107	PWY-5316	nicotine biosynthesis
RPB_1107	PWY-7342	superpathway of nicotine biosynthesis
RPB_1118	PWY-5686	UMP biosynthesis
RPB_1131	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPB_1131	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPB_1133	PWY-5751	phenylethanol biosynthesis
RPB_1135	PWY-381	nitrate reduction II (assimilatory)
RPB_1135	PWY-5675	nitrate reduction V (assimilatory)
RPB_1135	PWY-6549	L-glutamine biosynthesis III
RPB_1135	PWY-6963	ammonia assimilation cycle I
RPB_1135	PWY-6964	ammonia assimilation cycle II
RPB_1141	PWY-3661	glycine betaine degradation I
RPB_1141	PWY-4722	creatinine degradation II
RPB_1142	PWY-3661	glycine betaine degradation I
RPB_1142	PWY-4722	creatinine degradation II
RPB_1143	PWY-3661	glycine betaine degradation I
RPB_1143	PWY-4722	creatinine degradation II
RPB_1144	PWY-3661	glycine betaine degradation I
RPB_1144	PWY-4722	creatinine degradation II
RPB_1145	PWY-2201	folate transformations I
RPB_1145	PWY-5497	purine nucleobases degradation II (anaerobic)
RPB_1147	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPB_1147	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPB_1155	PWY-5443	aminopropanol phosphate biosynthesis I
RPB_1161	PWY-6167	flavin biosynthesis II (archaea)
RPB_1161	PWY-6168	flavin biosynthesis III (fungi)
RPB_1161	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RPB_1174	PWY-6823	molybdenum cofactor biosynthesis
RPB_1176	PWY-5269	cardiolipin biosynthesis II
RPB_1176	PWY-5668	cardiolipin biosynthesis I
RPB_1198	PWY-6703	preQ<sub>0</sub> biosynthesis
RPB_1200	PWY-3781	aerobic respiration I (cytochrome c)
RPB_1200	PWY-6692	Fe(II) oxidation
RPB_1200	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
RPB_1200	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPB_1205	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RPB_1205	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RPB_1211	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPB_1211	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPB_1211	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPB_1211	PWY-6113	superpathway of mycolate biosynthesis
RPB_1211	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPB_1211	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPB_1211	PWY-7096	triclosan resistance
RPB_1211	PWYG-321	mycolate biosynthesis
RPB_1212	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPB_1237	PWY-1341	phenylacetate degradation II (anaerobic)
RPB_1237	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
RPB_1259	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPB_1259	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPB_1259	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPB_1270	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPB_1270	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPB_1302	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPB_1307	PWY-6749	CMP-legionaminate biosynthesis I
RPB_1330	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPB_1340	PWY-7560	methylerythritol phosphate pathway II
RPB_1341	PWY-702	L-methionine biosynthesis II
RPB_1360	PWY-5344	L-homocysteine biosynthesis
RPB_1360	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RPB_1371	PWY-5392	reductive TCA cycle II
RPB_1371	PWY-5537	pyruvate fermentation to acetate V
RPB_1371	PWY-5538	pyruvate fermentation to acetate VI
RPB_1371	PWY-5690	TCA cycle II (plants and fungi)
RPB_1371	PWY-5913	TCA cycle VI (obligate autotrophs)
RPB_1371	PWY-6728	methylaspartate cycle
RPB_1371	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPB_1371	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPB_1395	PWY-6728	methylaspartate cycle
RPB_1395	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPB_1395	PWY-7118	chitin degradation to ethanol
RPB_1395	PWY-7294	xylose degradation IV
RPB_1395	PWY-7295	L-arabinose degradation IV
RPB_1399	PWY-5194	siroheme biosynthesis
RPB_1399	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RPB_1401	PWY-6683	sulfate reduction III (assimilatory)
RPB_1405	PWY-381	nitrate reduction II (assimilatory)
RPB_1405	PWY-5675	nitrate reduction V (assimilatory)
RPB_1405	PWY-6549	L-glutamine biosynthesis III
RPB_1405	PWY-6963	ammonia assimilation cycle I
RPB_1405	PWY-6964	ammonia assimilation cycle II
RPB_1423	PWY-1042	glycolysis IV (plant cytosol)
RPB_1423	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RPB_1423	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPB_1423	PWY-5723	Rubisco shunt
RPB_1423	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPB_1423	PWY-6886	1-butanol autotrophic biosynthesis
RPB_1423	PWY-6901	superpathway of glucose and xylose degradation
RPB_1423	PWY-7003	glycerol degradation to butanol
RPB_1423	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RPB_1423	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPB_1434	PWY-3781	aerobic respiration I (cytochrome c)
RPB_1434	PWY-4521	arsenite oxidation I (respiratory)
RPB_1434	PWY-6692	Fe(II) oxidation
RPB_1434	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPB_1447	PWY-6123	inosine-5'-phosphate biosynthesis I
RPB_1447	PWY-7234	inosine-5'-phosphate biosynthesis III
RPB_1484	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPB_1502	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPB_1516	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPB_1516	PWY-5686	UMP biosynthesis
RPB_1516	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPB_1523	PWY-6749	CMP-legionaminate biosynthesis I
RPB_1524	PWY-5659	GDP-mannose biosynthesis
RPB_1524	PWY-6073	alginate biosynthesis I (algal)
RPB_1524	PWY-6082	alginate biosynthesis II (bacterial)
RPB_1524	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
RPB_1525	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
RPB_1525	PWY-5739	GDP-D-perosamine biosynthesis
RPB_1525	PWY-5740	GDP-L-colitose biosynthesis
RPB_1525	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
RPB_1526	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
RPB_1528	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
RPB_1536	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RPB_1536	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
RPB_1552	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
RPB_1552	PWY-5739	GDP-D-perosamine biosynthesis
RPB_1552	PWY-5740	GDP-L-colitose biosynthesis
RPB_1552	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
RPB_1562	PWY-3221	dTDP-L-rhamnose biosynthesis II
RPB_1562	PWY-6808	dTDP-D-forosamine biosynthesis
RPB_1562	PWY-6942	dTDP-D-desosamine biosynthesis
RPB_1562	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RPB_1562	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
RPB_1562	PWY-6974	dTDP-L-olivose biosynthesis
RPB_1562	PWY-6976	dTDP-L-mycarose biosynthesis
RPB_1562	PWY-7104	dTDP-L-megosamine biosynthesis
RPB_1562	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
RPB_1562	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
RPB_1562	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
RPB_1562	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
RPB_1562	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
RPB_1562	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
RPB_1562	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
RPB_1562	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
RPB_1565	PWY-3221	dTDP-L-rhamnose biosynthesis II
RPB_1565	PWY-6808	dTDP-D-forosamine biosynthesis
RPB_1565	PWY-6942	dTDP-D-desosamine biosynthesis
RPB_1565	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RPB_1565	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
RPB_1565	PWY-6974	dTDP-L-olivose biosynthesis
RPB_1565	PWY-6976	dTDP-L-mycarose biosynthesis
RPB_1565	PWY-7104	dTDP-L-megosamine biosynthesis
RPB_1565	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
RPB_1565	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
RPB_1565	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
RPB_1565	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
RPB_1565	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
RPB_1565	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
RPB_1565	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
RPB_1565	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
RPB_1576	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPB_1576	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPB_1577	PWY-2201	folate transformations I
RPB_1577	PWY-5497	purine nucleobases degradation II (anaerobic)
RPB_1584	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RPB_1584	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RPB_1584	PWY-6936	seleno-amino acid biosynthesis
RPB_1584	PWY-702	L-methionine biosynthesis II
RPB_1585	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
RPB_1588	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RPB_1588	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
RPB_1589	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RPB_1597	PWY-3821	galactose degradation III
RPB_1597	PWY-6317	galactose degradation I (Leloir pathway)
RPB_1597	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RPB_1597	PWY-6527	stachyose degradation
RPB_1597	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
RPB_1597	PWY-7344	UDP-D-galactose biosynthesis
RPB_1600	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
RPB_1605	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RPB_1605	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RPB_1605	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RPB_1617	PWY-6910	hydroxymethylpyrimidine salvage
RPB_1617	PWY-7356	thiamin salvage IV (yeast)
RPB_1617	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RPB_1642	PWY-1042	glycolysis IV (plant cytosol)
RPB_1642	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPB_1642	PWY-6901	superpathway of glucose and xylose degradation
RPB_1642	PWY-7003	glycerol degradation to butanol
RPB_1677	PWY-6854	ethylene biosynthesis III (microbes)
RPB_1679	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPB_1699	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RPB_1699	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RPB_1726	PWY-6098	diploterol and cycloartenol biosynthesis
RPB_1726	PWY-7072	hopanoid biosynthesis (bacteria)
RPB_1729	PWY-7560	methylerythritol phosphate pathway II
RPB_1733	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
RPB_1733	PWY-7494	choline degradation IV
RPB_1746	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPB_1746	PWY-5109	2-methylbutanoate biosynthesis
RPB_1746	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RPB_1746	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RPB_1746	PWY-5177	glutaryl-CoA degradation
RPB_1746	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPB_1746	PWY-6435	4-hydroxybenzoate biosynthesis V
RPB_1746	PWY-6583	pyruvate fermentation to butanol I
RPB_1746	PWY-6863	pyruvate fermentation to hexanol
RPB_1746	PWY-6883	pyruvate fermentation to butanol II
RPB_1746	PWY-6944	androstenedione degradation
RPB_1746	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RPB_1746	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RPB_1746	PWY-7007	methyl ketone biosynthesis
RPB_1746	PWY-7046	4-coumarate degradation (anaerobic)
RPB_1746	PWY-7094	fatty acid salvage
RPB_1746	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RPB_1746	PWY-735	jasmonic acid biosynthesis
RPB_1746	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RPB_1754	PWY-6683	sulfate reduction III (assimilatory)
RPB_1763	PWY-4261	glycerol degradation I
RPB_1764	PWY-2201	folate transformations I
RPB_1764	PWY-3841	folate transformations II
RPB_1765	PWY-2201	folate transformations I
RPB_1765	PWY-3841	folate transformations II
RPB_1767	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
RPB_1768	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RPB_1768	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
RPB_1777	PWY-5988	wound-induced proteolysis I
RPB_1777	PWY-6018	seed germination protein turnover
RPB_1800	PWY-5704	urea degradation II
RPB_1801	PWY-5704	urea degradation II
RPB_1803	PWY-5704	urea degradation II
RPB_1820	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPB_1827	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPB_1827	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPB_1828	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPB_1828	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPB_1863	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPB_1863	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPB_1863	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPB_1870	PWY-723	alkylnitronates degradation
RPB_1872	PWY-5964	guanylyl molybdenum cofactor biosynthesis
RPB_1879	PWY-2661	trehalose biosynthesis V
RPB_1880	PWY-2661	trehalose biosynthesis V
RPB_1882	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
RPB_1882	PWY-622	starch biosynthesis
RPB_1883	PWY-2622	trehalose biosynthesis IV
RPB_1885	PWY-5941	glycogen degradation II (eukaryotic)
RPB_1885	PWY-6724	starch degradation II
RPB_1885	PWY-6737	starch degradation V
RPB_1885	PWY-7238	sucrose biosynthesis II
RPB_1888	PWY-5530	sorbitol biosynthesis II
RPB_1888	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPB_1889	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RPB_1889	PWY-6855	chitin degradation I (archaea)
RPB_1889	PWY-6906	chitin derivatives degradation
RPB_1890	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RPB_1892	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPB_1892	PWY-3801	sucrose degradation II (sucrose synthase)
RPB_1892	PWY-5054	sorbitol biosynthesis I
RPB_1892	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
RPB_1892	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RPB_1892	PWY-5659	GDP-mannose biosynthesis
RPB_1892	PWY-5723	Rubisco shunt
RPB_1892	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPB_1892	PWY-621	sucrose degradation III (sucrose invertase)
RPB_1892	PWY-622	starch biosynthesis
RPB_1892	PWY-6531	mannitol cycle
RPB_1892	PWY-6981	chitin biosynthesis
RPB_1892	PWY-7238	sucrose biosynthesis II
RPB_1892	PWY-7347	sucrose biosynthesis III
RPB_1892	PWY-7385	1,3-propanediol biosynthesis (engineered)
RPB_1896	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPB_1915	PWY-5350	thiosulfate disproportionation III (rhodanese)
RPB_1954	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
RPB_1955	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RPB_1955	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RPB_1955	PWY-6897	thiamin salvage II
RPB_1955	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RPB_1955	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RPB_1955	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
RPB_1955	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RPB_1956	PWY-6891	thiazole biosynthesis II (Bacillus)
RPB_1956	PWY-6892	thiazole biosynthesis I (E. coli)
RPB_1968	PWY-4202	arsenate detoxification I (glutaredoxin)
RPB_1971	PWY-4202	arsenate detoxification I (glutaredoxin)
RPB_1971	PWY-4621	arsenate detoxification II (glutaredoxin)
RPB_1990	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPB_1990	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPB_1991	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RPB_1991	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RPB_1991	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RPB_1992	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPB_1992	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPB_1994	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RPB_1994	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
RPB_1994	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RPB_1994	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RPB_1996	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPB_1996	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPB_1998	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPB_1998	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPB_2001	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPB_2001	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPB_2026	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPB_2026	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPB_2030	PWY-5392	reductive TCA cycle II
RPB_2030	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPB_2030	PWY-5690	TCA cycle II (plants and fungi)
RPB_2030	PWY-5913	TCA cycle VI (obligate autotrophs)
RPB_2030	PWY-6728	methylaspartate cycle
RPB_2030	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPB_2030	PWY-7254	TCA cycle VII (acetate-producers)
RPB_2030	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPB_2036	PWY-3841	folate transformations II
RPB_2036	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPB_2036	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPB_2036	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RPB_2036	PWY-7199	pyrimidine deoxyribonucleosides salvage
RPB_2036	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RPB_2037	PWY-3841	folate transformations II
RPB_2037	PWY-6614	tetrahydrofolate biosynthesis
RPB_2045	PWY-6834	spermidine biosynthesis III
RPB_2085	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPB_2095	PWY-5101	L-isoleucine biosynthesis II
RPB_2095	PWY-5103	L-isoleucine biosynthesis III
RPB_2095	PWY-5104	L-isoleucine biosynthesis IV
RPB_2095	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPB_2107	PWY-5392	reductive TCA cycle II
RPB_2107	PWY-5537	pyruvate fermentation to acetate V
RPB_2107	PWY-5538	pyruvate fermentation to acetate VI
RPB_2107	PWY-5690	TCA cycle II (plants and fungi)
RPB_2107	PWY-5913	TCA cycle VI (obligate autotrophs)
RPB_2107	PWY-6728	methylaspartate cycle
RPB_2107	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPB_2107	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPB_2117	PWY-5642	2,4-dinitrotoluene degradation
RPB_2117	PWY-6373	acrylate degradation
RPB_2125	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPB_2135	PWY-6936	seleno-amino acid biosynthesis
RPB_2135	PWY-7274	D-cycloserine biosynthesis
RPB_2177	PWY-6857	retinol biosynthesis
RPB_2184	PWY-5663	tetrahydrobiopterin biosynthesis I
RPB_2184	PWY-5664	tetrahydrobiopterin biosynthesis II
RPB_2184	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RPB_2184	PWY-6703	preQ<sub>0</sub> biosynthesis
RPB_2184	PWY-6983	tetrahydrobiopterin biosynthesis III
RPB_2184	PWY-7442	drosopterin and aurodrosopterin biosynthesis
RPB_2196	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RPB_2196	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RPB_2196	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
RPB_2269	PWY-381	nitrate reduction II (assimilatory)
RPB_2269	PWY-5675	nitrate reduction V (assimilatory)
RPB_2269	PWY-6549	L-glutamine biosynthesis III
RPB_2269	PWY-6963	ammonia assimilation cycle I
RPB_2269	PWY-6964	ammonia assimilation cycle II
RPB_2316	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPB_2342	PWY-4381	fatty acid biosynthesis initiation I
RPB_2342	PWY-5743	3-hydroxypropanoate cycle
RPB_2342	PWY-5744	glyoxylate assimilation
RPB_2342	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPB_2342	PWY-6679	jadomycin biosynthesis
RPB_2342	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPB_2368	PWY-6339	syringate degradation
RPB_2371	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RPB_2371	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
RPB_2423	PWY-5686	UMP biosynthesis
RPB_2424	PWY-5686	UMP biosynthesis
RPB_2425	PWY-5081	L-tryptophan degradation VIII (to tryptophol)
RPB_2426	PWY-6454	vancomycin resistance I
RPB_2426	PWY-6455	vancomycin resistance II
RPB_2432	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
RPB_2432	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
RPB_2433	PWY-723	alkylnitronates degradation
RPB_2438	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPB_2445	PWY-6654	phosphopantothenate biosynthesis III
RPB_2452	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPB_2452	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPB_2452	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPB_2452	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RPB_2457	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPB_2466	PWY-4381	fatty acid biosynthesis initiation I
RPB_2466	PWY-6799	fatty acid biosynthesis (plant mitochondria)
RPB_2466	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPB_2467	PWY-5367	petroselinate biosynthesis
RPB_2467	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPB_2467	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPB_2467	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPB_2467	PWY-5994	palmitate biosynthesis I (animals and fungi)
RPB_2467	PWY-6113	superpathway of mycolate biosynthesis
RPB_2467	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPB_2467	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPB_2467	PWY-6951	RPB_2467
RPB_2467	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
RPB_2467	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPB_2467	PWYG-321	mycolate biosynthesis
RPB_2472	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RPB_2481	PWY-5988	wound-induced proteolysis I
RPB_2481	PWY-6018	seed germination protein turnover
RPB_2485	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RPB_2485	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
RPB_2485	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPB_2485	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPB_2485	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
RPB_2485	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RPB_2485	PWY-7205	CMP phosphorylation
RPB_2485	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RPB_2485	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPB_2485	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RPB_2485	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPB_2485	PWY-7224	purine deoxyribonucleosides salvage
RPB_2485	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPB_2485	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RPB_2488	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPB_2488	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
RPB_2489	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPB_2489	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPB_2489	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPB_2490	PWY-5269	cardiolipin biosynthesis II
RPB_2490	PWY-5668	cardiolipin biosynthesis I
RPB_2497	PWY-1281	sulfoacetaldehyde degradation I
RPB_2497	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPB_2497	PWY-5482	pyruvate fermentation to acetate II
RPB_2497	PWY-5485	pyruvate fermentation to acetate IV
RPB_2497	PWY-5497	purine nucleobases degradation II (anaerobic)
RPB_2497	PWY-6637	sulfolactate degradation II
RPB_2497	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPB_2499	PWY-3841	folate transformations II
RPB_2499	PWY-6614	tetrahydrofolate biosynthesis
RPB_2544	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RPB_2544	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPB_2544	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RPB_2544	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RPB_2544	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPB_2544	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPB_2544	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPB_2544	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RPB_2551	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPB_2558	PWY-381	nitrate reduction II (assimilatory)
RPB_2558	PWY-5675	nitrate reduction V (assimilatory)
RPB_2558	PWY-6549	L-glutamine biosynthesis III
RPB_2558	PWY-6963	ammonia assimilation cycle I
RPB_2558	PWY-6964	ammonia assimilation cycle II
RPB_2560	PWY-6938	NADH repair
RPB_2586	PWY-3781	aerobic respiration I (cytochrome c)
RPB_2586	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RPB_2586	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RPB_2586	PWY-6692	Fe(II) oxidation
RPB_2588	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RPB_2588	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
RPB_2590	PWY-5743	3-hydroxypropanoate cycle
RPB_2590	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPB_2590	PWY-6728	methylaspartate cycle
RPB_2590	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPB_2592	PWY-5381	pyridine nucleotide cycling (plants)
RPB_2602	PWY-2941	L-lysine biosynthesis II
RPB_2602	PWY-2942	L-lysine biosynthesis III
RPB_2602	PWY-5097	L-lysine biosynthesis VI
RPB_2610	PWY-6012	acyl carrier protein metabolism I
RPB_2610	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
RPB_2623	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPB_2623	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPB_2634	PWY-1622	formaldehyde assimilation I (serine pathway)
RPB_2634	PWY-181	photorespiration
RPB_2634	PWY-2161	folate polyglutamylation
RPB_2634	PWY-2201	folate transformations I
RPB_2634	PWY-3661	glycine betaine degradation I
RPB_2634	PWY-3661-1	glycine betaine degradation II (mammalian)
RPB_2634	PWY-3841	folate transformations II
RPB_2634	PWY-5497	purine nucleobases degradation II (anaerobic)
RPB_2637	PWY-6167	flavin biosynthesis II (archaea)
RPB_2637	PWY-6168	flavin biosynthesis III (fungi)
RPB_2637	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPB_2638	PWY-6167	flavin biosynthesis II (archaea)
RPB_2638	PWY-6168	flavin biosynthesis III (fungi)
RPB_2640	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RPB_2640	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RPB_2640	PWY-6896	thiamin salvage I
RPB_2640	PWY-6897	thiamin salvage II
RPB_2650	PWY-4381	fatty acid biosynthesis initiation I
RPB_2659	PWY-6655	xanthan biosynthesis
RPB_2659	PWY-6658	acetan biosynthesis
RPB_2667	PWY-5344	L-homocysteine biosynthesis
RPB_2667	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RPB_2678	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RPB_2678	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RPB_2679	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RPB_2679	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPB_2679	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPB_2679	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
RPB_2679	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RPB_2679	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RPB_2704	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
RPB_2704	PWY-581	indole-3-acetate biosynthesis II
RPB_2704	PWY-7308	acrylonitrile degradation I
RPB_2705	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
RPB_2705	PWY-581	indole-3-acetate biosynthesis II
RPB_2705	PWY-7308	acrylonitrile degradation I
RPB_2706	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
RPB_2706	PWY-581	indole-3-acetate biosynthesis II
RPB_2706	PWY-7308	acrylonitrile degradation I
RPB_2709	PWY-6703	preQ<sub>0</sub> biosynthesis
RPB_2739	PWY-5381	pyridine nucleotide cycling (plants)
RPB_2739	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RPB_2739	PWY-6596	adenosine nucleotides degradation I
RPB_2739	PWY-6606	guanosine nucleotides degradation II
RPB_2739	PWY-6607	guanosine nucleotides degradation I
RPB_2739	PWY-6608	guanosine nucleotides degradation III
RPB_2739	PWY-7185	UTP and CTP dephosphorylation I
RPB_2742	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
RPB_2766	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
RPB_2766	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RPB_2778	PWY-1042	glycolysis IV (plant cytosol)
RPB_2778	PWY-1622	formaldehyde assimilation I (serine pathway)
RPB_2778	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RPB_2778	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPB_2778	PWY-5723	Rubisco shunt
RPB_2778	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPB_2778	PWY-6886	1-butanol autotrophic biosynthesis
RPB_2778	PWY-6901	superpathway of glucose and xylose degradation
RPB_2778	PWY-7003	glycerol degradation to butanol
RPB_2778	PWY-7124	ethylene biosynthesis V (engineered)
RPB_2778	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RPB_2779	PWY-6700	queuosine biosynthesis
RPB_2784	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RPB_2784	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
RPB_2790	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
RPB_2790	PWY-7177	UTP and CTP dephosphorylation II
RPB_2790	PWY-7185	UTP and CTP dephosphorylation I
RPB_2795	PWY-1042	glycolysis IV (plant cytosol)
RPB_2795	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPB_2795	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPB_2795	PWY-7003	glycerol degradation to butanol
RPB_2808	PWY-6823	molybdenum cofactor biosynthesis
RPB_2811	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPB_2812	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPB_2818	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPB_2818	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPB_2818	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPB_2818	PWY-5994	palmitate biosynthesis I (animals and fungi)
RPB_2818	PWY-6113	superpathway of mycolate biosynthesis
RPB_2818	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPB_2818	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPB_2818	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPB_2818	PWYG-321	mycolate biosynthesis
RPB_2822	PWY-7560	methylerythritol phosphate pathway II
RPB_2842	PWY-6826	phosphatidylcholine biosynthesis VI
RPB_2854	PWY-6749	CMP-legionaminate biosynthesis I
RPB_2855	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RPB_2869	PWY-6700	queuosine biosynthesis
RPB_2870	PWY-6700	queuosine biosynthesis
RPB_2885	PWY-7560	methylerythritol phosphate pathway II
RPB_2888	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RPB_2888	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
RPB_2888	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
RPB_2913	PWY-6936	seleno-amino acid biosynthesis
RPB_2934	PWY-4381	fatty acid biosynthesis initiation I
RPB_2934	PWY-5743	3-hydroxypropanoate cycle
RPB_2934	PWY-5744	glyoxylate assimilation
RPB_2934	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPB_2934	PWY-6679	jadomycin biosynthesis
RPB_2934	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPB_2963	PWY-7425	2-chloroacrylate degradation I
RPB_2965	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPB_2972	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPB_2972	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPB_2990	PWY-6823	molybdenum cofactor biosynthesis
RPB_2990	PWY-6891	thiazole biosynthesis II (Bacillus)
RPB_2990	PWY-6892	thiazole biosynthesis I (E. coli)
RPB_2990	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RPB_2995	PWY-6823	molybdenum cofactor biosynthesis
RPB_2995	PWY-6891	thiazole biosynthesis II (Bacillus)
RPB_2995	PWY-6892	thiazole biosynthesis I (E. coli)
RPB_2995	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RPB_3018	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPB_3018	PWY-6416	quinate degradation II
RPB_3018	PWY-6707	gallate biosynthesis
RPB_3142	PWY-6748	nitrate reduction VII (denitrification)
RPB_3142	PWY-7084	nitrifier denitrification
RPB_3169	PWY-1042	glycolysis IV (plant cytosol)
RPB_3169	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RPB_3169	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPB_3169	PWY-5723	Rubisco shunt
RPB_3169	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPB_3169	PWY-6886	1-butanol autotrophic biosynthesis
RPB_3169	PWY-6901	superpathway of glucose and xylose degradation
RPB_3169	PWY-7003	glycerol degradation to butanol
RPB_3169	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RPB_3169	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPB_3174	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
RPB_3179	PWY-5194	siroheme biosynthesis
RPB_3179	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RPB_3182	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RPB_3184	PWY-5194	siroheme biosynthesis
RPB_3184	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RPB_3186	PWY-5194	siroheme biosynthesis
RPB_3186	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RPB_3189	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RPB_3193	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RPB_3193	PWY-6596	adenosine nucleotides degradation I
RPB_3193	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RPB_3203	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPB_3210	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RPB_3210	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RPB_3210	PWY-6936	seleno-amino acid biosynthesis
RPB_3210	PWY-702	L-methionine biosynthesis II
RPB_3227	PWY-5532	adenosine nucleotides degradation IV
RPB_3227	PWY-5723	Rubisco shunt
RPB_3247	PWY-5101	L-isoleucine biosynthesis II
RPB_3247	PWY-5103	L-isoleucine biosynthesis III
RPB_3247	PWY-5104	L-isoleucine biosynthesis IV
RPB_3247	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPB_3251	PWY-6891	thiazole biosynthesis II (Bacillus)
RPB_3251	PWY-6892	thiazole biosynthesis I (E. coli)
RPB_3251	PWY-7560	methylerythritol phosphate pathway II
RPB_3260	PWY-4381	fatty acid biosynthesis initiation I
RPB_3260	PWY-5743	3-hydroxypropanoate cycle
RPB_3260	PWY-5744	glyoxylate assimilation
RPB_3260	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPB_3260	PWY-6679	jadomycin biosynthesis
RPB_3260	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPB_3282	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPB_3282	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPB_3282	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPB_3283	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPB_3283	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPB_3283	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPB_3293	PWY-5796	malonate decarboxylase activation
RPB_3295	PWY-6060	malonate degradation II (biotin-dependent)
RPB_3296	PWY-4381	fatty acid biosynthesis initiation I
RPB_3296	PWY-5743	3-hydroxypropanoate cycle
RPB_3296	PWY-5744	glyoxylate assimilation
RPB_3296	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPB_3296	PWY-6060	malonate degradation II (biotin-dependent)
RPB_3296	PWY-6679	jadomycin biosynthesis
RPB_3296	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPB_3298	PWY-5794	malonate degradation I (biotin-independent)
RPB_3298	PWY-6060	malonate degradation II (biotin-dependent)
RPB_3299	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RPB_3299	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
RPB_3300	PWY-6060	malonate degradation II (biotin-dependent)
RPB_3300	PWY-6339	syringate degradation
RPB_3301	PWY-5796	malonate decarboxylase activation
RPB_3320	PWY-6157	autoinducer AI-1 biosynthesis
RPB_3330	PWY-6871	3-methylbutanol biosynthesis
RPB_3331	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RPB_3341	PWY-5101	L-isoleucine biosynthesis II
RPB_3341	PWY-5103	L-isoleucine biosynthesis III
RPB_3341	PWY-5104	L-isoleucine biosynthesis IV
RPB_3341	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPB_3344	PWY-5101	L-isoleucine biosynthesis II
RPB_3344	PWY-5103	L-isoleucine biosynthesis III
RPB_3344	PWY-5104	L-isoleucine biosynthesis IV
RPB_3344	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
RPB_3344	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RPB_3344	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RPB_3344	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPB_3345	PWY-5101	L-isoleucine biosynthesis II
RPB_3345	PWY-5103	L-isoleucine biosynthesis III
RPB_3345	PWY-5104	L-isoleucine biosynthesis IV
RPB_3345	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
RPB_3345	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RPB_3345	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RPB_3345	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPB_3346	PWY-2781	<i>cis</i>-zeatin biosynthesis
RPB_3354	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPB_3354	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPB_3354	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPB_3354	PWY-5994	palmitate biosynthesis I (animals and fungi)
RPB_3354	PWY-6113	superpathway of mycolate biosynthesis
RPB_3354	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPB_3354	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPB_3354	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPB_3354	PWYG-321	mycolate biosynthesis
RPB_3366	PWY-5669	phosphatidylethanolamine biosynthesis I
RPB_3367	PWY-5669	phosphatidylethanolamine biosynthesis I
RPB_3371	PWY-5101	L-isoleucine biosynthesis II
RPB_3371	PWY-6871	3-methylbutanol biosynthesis
RPB_3382	PWY-7039	phosphatidate metabolism, as a signaling molecule
RPB_3383	PWY-6164	3-dehydroquinate biosynthesis I
RPB_3384	PWY-4081	glutathione redox reactions I
RPB_3386	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPB_3386	PWY-5723	Rubisco shunt
RPB_3387	PWY-181	photorespiration
RPB_3389	PWY-6823	molybdenum cofactor biosynthesis
RPB_3418	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RPB_3418	PWY-3162	L-tryptophan degradation V (side chain pathway)
RPB_3418	PWY-5057	L-valine degradation II
RPB_3418	PWY-5076	L-leucine degradation III
RPB_3418	PWY-5078	L-isoleucine degradation II
RPB_3418	PWY-5079	L-phenylalanine degradation III
RPB_3418	PWY-5082	L-methionine degradation III
RPB_3418	PWY-5480	pyruvate fermentation to ethanol I
RPB_3418	PWY-5486	pyruvate fermentation to ethanol II
RPB_3418	PWY-5751	phenylethanol biosynthesis
RPB_3418	PWY-6028	acetoin degradation
RPB_3418	PWY-6313	serotonin degradation
RPB_3418	PWY-6333	acetaldehyde biosynthesis I
RPB_3418	PWY-6342	noradrenaline and adrenaline degradation
RPB_3418	PWY-6587	pyruvate fermentation to ethanol III
RPB_3418	PWY-6802	salidroside biosynthesis
RPB_3418	PWY-6871	3-methylbutanol biosynthesis
RPB_3418	PWY-7013	L-1,2-propanediol degradation
RPB_3418	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPB_3418	PWY-7118	chitin degradation to ethanol
RPB_3418	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RPB_3418	PWY-7557	dehydrodiconiferyl alcohol degradation
RPB_3419	PWY-6823	molybdenum cofactor biosynthesis
RPB_3421	PWY-6420	pyrroloquinoline quinone biosynthesis
RPB_3427	PWY-6695	oxalate degradation II
RPB_3431	PWY-6654	phosphopantothenate biosynthesis III
RPB_3433	PWY-723	alkylnitronates degradation
RPB_3474	PWY-6703	preQ<sub>0</sub> biosynthesis
RPB_3533	PWY-6614	tetrahydrofolate biosynthesis
RPB_3534	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RPB_3534	PWY-6148	tetrahydromethanopterin biosynthesis
RPB_3534	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RPB_3534	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RPB_3535	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RPB_3535	PWY-6148	tetrahydromethanopterin biosynthesis
RPB_3535	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RPB_3535	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RPB_3536	PWY-5743	3-hydroxypropanoate cycle
RPB_3536	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPB_3536	PWY-6728	methylaspartate cycle
RPB_3536	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPB_3537	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RPB_3538	PWY-5743	3-hydroxypropanoate cycle
RPB_3538	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPB_3538	PWY-6728	methylaspartate cycle
RPB_3538	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPB_3583	PWY-6215	4-chlorobenzoate degradation
RPB_3586	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPB_3592	PWY-1622	formaldehyde assimilation I (serine pathway)
RPB_3592	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPB_3592	PWY-5913	TCA cycle VI (obligate autotrophs)
RPB_3592	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPB_3592	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
RPB_3592	PWY-6549	L-glutamine biosynthesis III
RPB_3592	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPB_3592	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPB_3592	PWY-7124	ethylene biosynthesis V (engineered)
RPB_3627	PWY-3121	linamarin degradation
RPB_3627	PWY-5176	coumarin biosynthesis (via 2-coumarate)
RPB_3627	PWY-6002	lotaustralin degradation
RPB_3627	PWY-6788	cellulose degradation II (fungi)
RPB_3627	PWY-7089	taxiphyllin bioactivation
RPB_3627	PWY-7091	linustatin bioactivation
RPB_3627	PWY-7092	neolinustatin bioactivation
RPB_3629	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPB_3634	PWY-1341	phenylacetate degradation II (anaerobic)
RPB_3634	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
RPB_3645	PWY-5451	acetone degradation I (to methylglyoxal)
RPB_3645	PWY-5665	vanillin biosynthesis I
RPB_3645	PWY-6398	melatonin degradation I
RPB_3645	PWY-6992	1,5-anhydrofructose degradation
RPB_3645	PWY-7466	acetone degradation III (to propane-1,2-diol)
RPB_3687	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPB_3689	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPB_3689	PWY-5723	Rubisco shunt
RPB_3693	PWY-6123	inosine-5'-phosphate biosynthesis I
RPB_3693	PWY-6124	inosine-5'-phosphate biosynthesis II
RPB_3693	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPB_3693	PWY-7234	inosine-5'-phosphate biosynthesis III
RPB_3694	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPB_3694	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPB_3713	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPB_3713	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPB_3713	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPB_3716	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPB_3716	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPB_3716	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPB_3718	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPB_3718	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPB_3718	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPB_3719	PWY-6123	inosine-5'-phosphate biosynthesis I
RPB_3719	PWY-6124	inosine-5'-phosphate biosynthesis II
RPB_3719	PWY-7234	inosine-5'-phosphate biosynthesis III
RPB_3732	PWY-5913	TCA cycle VI (obligate autotrophs)
RPB_3732	PWY-6549	L-glutamine biosynthesis III
RPB_3732	PWY-6728	methylaspartate cycle
RPB_3732	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPB_3732	PWY-7124	ethylene biosynthesis V (engineered)
RPB_3732	PWY-7254	TCA cycle VII (acetate-producers)
RPB_3732	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RPB_3762	PWY-5392	reductive TCA cycle II
RPB_3762	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPB_3762	PWY-5690	TCA cycle II (plants and fungi)
RPB_3762	PWY-5913	TCA cycle VI (obligate autotrophs)
RPB_3762	PWY-6728	methylaspartate cycle
RPB_3762	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPB_3762	PWY-7254	TCA cycle VII (acetate-producers)
RPB_3762	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPB_3810	PWY-3221	dTDP-L-rhamnose biosynthesis II
RPB_3810	PWY-6808	dTDP-D-forosamine biosynthesis
RPB_3810	PWY-6942	dTDP-D-desosamine biosynthesis
RPB_3810	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RPB_3810	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
RPB_3810	PWY-6974	dTDP-L-olivose biosynthesis
RPB_3810	PWY-6976	dTDP-L-mycarose biosynthesis
RPB_3810	PWY-7104	dTDP-L-megosamine biosynthesis
RPB_3810	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
RPB_3810	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
RPB_3810	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
RPB_3810	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
RPB_3810	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
RPB_3810	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
RPB_3810	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
RPB_3810	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
RPB_3841	PWY-101	photosynthesis light reactions
RPB_3841	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
RPB_3847	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
RPB_3847	PWY-7494	choline degradation IV
RPB_3888	PWY-6654	phosphopantothenate biosynthesis III
RPB_3911	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPB_3946	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
RPB_3946	PWY-6853	ethylene biosynthesis II (microbes)
RPB_3946	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RPB_3960	PWY-5344	L-homocysteine biosynthesis
RPB_3960	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RPB_3963	PWY-5532	adenosine nucleotides degradation IV
RPB_3963	PWY-5723	Rubisco shunt
RPB_3964	PWY-5532	adenosine nucleotides degradation IV
RPB_3964	PWY-5723	Rubisco shunt
RPB_3969	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPB_3969	PWY-7536	2-amino-3-hydroxycyclopent-2-enone biosynthesis
RPB_3977	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPB_3977	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPB_3978	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPB_3978	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPB_3979	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPB_3979	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPB_3980	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPB_3980	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPB_3981	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPB_3981	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPB_3984	PWY-5874	heme degradation
RPB_3984	PWY-5915	phycoerythrobilin biosynthesis I
RPB_3984	PWY-5917	phycocyanobilin biosynthesis
RPB_3984	PWY-7170	phytochromobilin biosynthesis
RPB_3994	PWY-101	photosynthesis light reactions
RPB_3994	PWY-6785	hydrogen production VIII
RPB_3995	PWY-101	photosynthesis light reactions
RPB_3995	PWY-6785	hydrogen production VIII
RPB_3999	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
RPB_3999	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPB_3999	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPB_4000	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
RPB_4000	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPB_4000	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPB_4001	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
RPB_4009	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPB_4009	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPB_4012	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPB_4012	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPB_4014	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPB_4014	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPB_4016	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPB_4016	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPB_4017	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPB_4017	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPB_4018	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPB_4018	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPB_4039	PWY-2723	trehalose degradation V
RPB_4039	PWY-3801	sucrose degradation II (sucrose synthase)
RPB_4039	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
RPB_4039	PWY-5661	GDP-glucose biosynthesis
RPB_4039	PWY-5661-1	RPB_4039
RPB_4039	PWY-5940	streptomycin biosynthesis
RPB_4039	PWY-5941	glycogen degradation II (eukaryotic)
RPB_4039	PWY-622	starch biosynthesis
RPB_4039	PWY-6731	starch degradation III
RPB_4039	PWY-6737	starch degradation V
RPB_4039	PWY-6749	CMP-legionaminate biosynthesis I
RPB_4039	PWY-7238	sucrose biosynthesis II
RPB_4039	PWY-7343	UDP-glucose biosynthesis
RPB_4054	PWY-5169	cyanurate degradation
RPB_4054	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPB_4057	PWY-5169	cyanurate degradation
RPB_4057	PWY-5703	urea degradation I
RPB_4057	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPB_4062	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
RPB_4062	PWY-7494	choline degradation IV
RPB_4066	PWY-5101	L-isoleucine biosynthesis II
RPB_4066	PWY-5103	L-isoleucine biosynthesis III
RPB_4066	PWY-5104	L-isoleucine biosynthesis IV
RPB_4066	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPB_4081	PWY-5532	adenosine nucleotides degradation IV
RPB_4082	PWY-7399	methylphosphonate degradation II
RPB_4089	PWY-7399	methylphosphonate degradation II
RPB_4092	PWY-7399	methylphosphonate degradation II
RPB_4094	PWY-7399	methylphosphonate degradation II
RPB_4095	PWY-7399	methylphosphonate degradation II
RPB_4096	PWY-5532	adenosine nucleotides degradation IV
RPB_4097	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RPB_4097	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RPB_4123	PWY-4381	fatty acid biosynthesis initiation I
RPB_4142	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPB_4142	PWY-5686	UMP biosynthesis
RPB_4142	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPB_4169	PWY-6167	flavin biosynthesis II (archaea)
RPB_4169	PWY-6168	flavin biosynthesis III (fungi)
RPB_4171	PWY-3341	L-proline biosynthesis III
RPB_4171	PWY-4981	L-proline biosynthesis II (from arginine)
RPB_4171	PWY-6344	L-ornithine degradation II (Stickland reaction)
RPB_4175	PWY-5057	L-valine degradation II
RPB_4175	PWY-5076	L-leucine degradation III
RPB_4175	PWY-5078	L-isoleucine degradation II
RPB_4175	PWY-5101	L-isoleucine biosynthesis II
RPB_4175	PWY-5103	L-isoleucine biosynthesis III
RPB_4175	PWY-5104	L-isoleucine biosynthesis IV
RPB_4175	PWY-5108	L-isoleucine biosynthesis V
RPB_4186	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
RPB_4186	PWY-6167	flavin biosynthesis II (archaea)
RPB_4186	PWY-6168	flavin biosynthesis III (fungi)
RPB_4199	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPB_4217	PWY-4261	glycerol degradation I
RPB_4217	PWY-6118	glycerol-3-phosphate shuttle
RPB_4217	PWY-6952	glycerophosphodiester degradation
RPB_4227	PWY-4041	&gamma;-glutamyl cycle
RPB_4227	PWY-5826	hypoglycin biosynthesis
RPB_4252	PWY-5344	L-homocysteine biosynthesis
RPB_4253	PWY-3461	L-tyrosine biosynthesis II
RPB_4253	PWY-3462	L-phenylalanine biosynthesis II
RPB_4253	PWY-6120	L-tyrosine biosynthesis III
RPB_4253	PWY-6627	salinosporamide A biosynthesis
RPB_4292	PWY-6825	phosphatidylcholine biosynthesis V
RPB_4306	PWY-3781	aerobic respiration I (cytochrome c)
RPB_4306	PWY-6692	Fe(II) oxidation
RPB_4306	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
RPB_4306	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPB_4317	PWY-6605	adenine and adenosine salvage II
RPB_4317	PWY-6610	adenine and adenosine salvage IV
RPB_4318	PWY-5958	acridone alkaloid biosynthesis
RPB_4318	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RPB_4318	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RPB_4343	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RPB_4352	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPB_4352	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPB_4363	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
RPB_4364	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
RPB_4390	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
RPB_4390	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
RPB_4407	PWY-5198	factor 420 biosynthesis
RPB_4408	PWY-5199	factor 420 polyglutamylation
RPB_4422	PWY-5198	factor 420 biosynthesis
RPB_4423	PWY-5198	factor 420 biosynthesis
RPB_4460	PWY-6891	thiazole biosynthesis II (Bacillus)
RPB_4460	PWY-6892	thiazole biosynthesis I (E. coli)
RPB_4460	PWY-7560	methylerythritol phosphate pathway II
RPB_4466	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPB_4466	PWY-5723	Rubisco shunt
RPB_4466	PWY-6891	thiazole biosynthesis II (Bacillus)
RPB_4466	PWY-6892	thiazole biosynthesis I (E. coli)
RPB_4466	PWY-6901	superpathway of glucose and xylose degradation
RPB_4466	PWY-7560	methylerythritol phosphate pathway II
RPB_4467	PWY-1042	glycolysis IV (plant cytosol)
RPB_4467	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPB_4467	PWY-6901	superpathway of glucose and xylose degradation
RPB_4467	PWY-7003	glycerol degradation to butanol
RPB_4468	PWY-1042	glycolysis IV (plant cytosol)
RPB_4468	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPB_4468	PWY-6886	1-butanol autotrophic biosynthesis
RPB_4468	PWY-6901	superpathway of glucose and xylose degradation
RPB_4468	PWY-7003	glycerol degradation to butanol
RPB_4471	PWY-1042	glycolysis IV (plant cytosol)
RPB_4471	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPB_4471	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPB_4471	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPB_4471	PWY-7385	1,3-propanediol biosynthesis (engineered)
RPB_4472	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RPB_4472	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RPB_4472	PWY-6897	thiamin salvage II
RPB_4472	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RPB_4472	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RPB_4472	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
RPB_4472	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RPB_4474	PWY-2301	<i>myo</i>-inositol biosynthesis
RPB_4474	PWY-4702	phytate degradation I
RPB_4474	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
RPB_4506	PWY-6785	hydrogen production VIII
RPB_4525	PWY-2941	L-lysine biosynthesis II
RPB_4525	PWY-2942	L-lysine biosynthesis III
RPB_4525	PWY-5097	L-lysine biosynthesis VI
RPB_4535	PWY-3801	sucrose degradation II (sucrose synthase)
RPB_4535	PWY-6527	stachyose degradation
RPB_4535	PWY-6981	chitin biosynthesis
RPB_4535	PWY-7238	sucrose biosynthesis II
RPB_4535	PWY-7343	UDP-glucose biosynthesis
RPB_4563	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPB_4563	PWY-7536	2-amino-3-hydroxycyclopent-2-enone biosynthesis
RPB_4587	PWY-3781	aerobic respiration I (cytochrome c)
RPB_4587	PWY-4521	arsenite oxidation I (respiratory)
RPB_4587	PWY-6692	Fe(II) oxidation
RPB_4587	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPB_4597	PWY-6840	homoglutathione biosynthesis
RPB_4597	PWY-7255	ergothioneine biosynthesis I (bacteria)
RPB_4604	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPB_4604	PWY-5109	2-methylbutanoate biosynthesis
RPB_4604	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RPB_4604	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RPB_4604	PWY-5177	glutaryl-CoA degradation
RPB_4604	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPB_4604	PWY-6435	4-hydroxybenzoate biosynthesis V
RPB_4604	PWY-6583	pyruvate fermentation to butanol I
RPB_4604	PWY-6863	pyruvate fermentation to hexanol
RPB_4604	PWY-6883	pyruvate fermentation to butanol II
RPB_4604	PWY-6944	androstenedione degradation
RPB_4604	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RPB_4604	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RPB_4604	PWY-7007	methyl ketone biosynthesis
RPB_4604	PWY-7046	4-coumarate degradation (anaerobic)
RPB_4604	PWY-7094	fatty acid salvage
RPB_4604	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RPB_4604	PWY-735	jasmonic acid biosynthesis
RPB_4604	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RPB_4620	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPB_4620	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPB_4620	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPB_4620	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPB_4622	PWY-5686	UMP biosynthesis
RPB_4625	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPB_4625	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPB_4625	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPB_4625	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPB_4629	PWY-6832	2-aminoethylphosphonate degradation II
RPB_4650	PWY-4041	&gamma;-glutamyl cycle
RPB_4650	PWY-5826	hypoglycin biosynthesis
RPB_4653	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPB_4654	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPB_4657	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPB_4677	PWY-5386	methylglyoxal degradation I
RPB_4697	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
RPB_4697	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
