Rru_A0051 PWY-4381 fatty acid biosynthesis initiation I Rru_A0051 PWY-5743 3-hydroxypropanoate cycle Rru_A0051 PWY-5744 glyoxylate assimilation Rru_A0051 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Rru_A0051 PWY-6679 jadomycin biosynthesis Rru_A0051 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Rru_A0053 PWY-4381 fatty acid biosynthesis initiation I Rru_A0053 PWY-5743 3-hydroxypropanoate cycle Rru_A0053 PWY-5744 glyoxylate assimilation Rru_A0053 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Rru_A0053 PWY-6679 jadomycin biosynthesis Rru_A0053 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Rru_A0054 PWY-6891 thiazole biosynthesis II (Bacillus) Rru_A0054 PWY-6892 thiazole biosynthesis I (E. coli) Rru_A0054 PWY-7560 methylerythritol phosphate pathway II Rru_A0058 PWY-5152 leucodelphinidin biosynthesis Rru_A0059 PWY-7560 methylerythritol phosphate pathway II Rru_A0062 PWY-6098 diploterol and cycloartenol biosynthesis Rru_A0062 PWY-7072 hopanoid biosynthesis (bacteria) Rru_A0132 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Rru_A0132 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Rru_A0138 PWY-5988 wound-induced proteolysis I Rru_A0138 PWY-6018 seed germination protein turnover Rru_A0141 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Rru_A0141 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Rru_A0142 PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde Rru_A0142 PWY-6309 L-tryptophan degradation XI (mammalian, via kynurenine) Rru_A0154 PWY-2941 L-lysine biosynthesis II Rru_A0154 PWY-2942 L-lysine biosynthesis III Rru_A0154 PWY-5097 L-lysine biosynthesis VI Rru_A0191 PWY-5155 β-alanine biosynthesis III Rru_A0202 PWY-3561 choline biosynthesis III Rru_A0202 PWY-7039 phosphatidate metabolism, as a signaling molecule Rru_A0206 PWY-7376 cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation) Rru_A0207 PWY-7376 cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation) Rru_A0218 PWY-4381 fatty acid biosynthesis initiation I Rru_A0218 PWY-5743 3-hydroxypropanoate cycle Rru_A0218 PWY-5744 glyoxylate assimilation Rru_A0218 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Rru_A0218 PWY-6679 jadomycin biosynthesis Rru_A0218 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Rru_A0221 PWY-1042 glycolysis IV (plant cytosol) Rru_A0221 PWY-5484 glycolysis II (from fructose 6-phosphate) Rru_A0221 PWY-6886 1-butanol autotrophic biosynthesis Rru_A0221 PWY-6901 superpathway of glucose and xylose degradation Rru_A0221 PWY-7003 glycerol degradation to butanol Rru_A0222 PWY-1042 glycolysis IV (plant cytosol) Rru_A0222 PWY-5484 glycolysis II (from fructose 6-phosphate) Rru_A0222 PWY-6901 superpathway of glucose and xylose degradation Rru_A0222 PWY-7003 glycerol degradation to butanol Rru_A0244 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Rru_A0244 PWY-6596 adenosine nucleotides degradation I Rru_A0244 PWY-7221 guanosine ribonucleotides de novo biosynthesis Rru_A0250 PWY-4261 glycerol degradation I Rru_A0253 PWY-5738 GDP-6-deoxy-D-talose biosynthesis Rru_A0253 PWY-5739 GDP-D-perosamine biosynthesis Rru_A0253 PWY-5740 GDP-L-colitose biosynthesis Rru_A0253 PWY-66 GDP-L-fucose biosynthesis I (from GDP-D-mannose) Rru_A0254 PWY-66 GDP-L-fucose biosynthesis I (from GDP-D-mannose) Rru_A0263 PWY-7560 methylerythritol phosphate pathway II Rru_A0271 PWY-5663 tetrahydrobiopterin biosynthesis I Rru_A0271 PWY-5664 tetrahydrobiopterin biosynthesis II Rru_A0271 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Rru_A0271 PWY-6703 preQ0 biosynthesis Rru_A0271 PWY-6983 tetrahydrobiopterin biosynthesis III Rru_A0271 PWY-7442 drosopterin and aurodrosopterin biosynthesis Rru_A0273 PWY-5676 acetyl-CoA fermentation to butanoate II Rru_A0273 PWY-5741 ethylmalonyl-CoA pathway Rru_A0273 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Rru_A0280 PWY-6700 queuosine biosynthesis Rru_A0281 PWY-6700 queuosine biosynthesis Rru_A0289 PWY-5381 pyridine nucleotide cycling (plants) Rru_A0294 PWY-7205 CMP phosphorylation Rru_A0295 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Rru_A0324 PWY-1881 formate oxidation to CO2 Rru_A0324 PWY-5497 purine nucleobases degradation II (anaerobic) Rru_A0324 PWY-6696 oxalate degradation III Rru_A0325 PWY-6823 molybdenum cofactor biosynthesis Rru_A0355 PWY-7221 guanosine ribonucleotides de novo biosynthesis Rru_A0356 PWY-5913 TCA cycle VI (obligate autotrophs) Rru_A0356 PWY-6549 L-glutamine biosynthesis III Rru_A0356 PWY-6728 methylaspartate cycle Rru_A0356 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Rru_A0356 PWY-7124 ethylene biosynthesis V (engineered) Rru_A0356 PWY-7254 TCA cycle VII (acetate-producers) Rru_A0356 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Rru_A0358 PWY-5874 heme degradation Rru_A0358 PWY-5915 phycoerythrobilin biosynthesis I Rru_A0358 PWY-5917 phycocyanobilin biosynthesis Rru_A0358 PWY-7170 phytochromobilin biosynthesis Rru_A0360 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation Rru_A0360 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Rru_A0364 PWY-3781 aerobic respiration I (cytochrome c) Rru_A0364 PWY-6692 Fe(II) oxidation Rru_A0364 PWY-7082 ammonia oxidation IV (autotrophic ammonia oxidizers) Rru_A0364 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Rru_A0373 PWY-6785 hydrogen production VIII Rru_A0374 PWY-4061 glutathione-mediated detoxification I Rru_A0374 PWY-6842 glutathione-mediated detoxification II Rru_A0374 PWY-7112 4-hydroxy-2-nonenal detoxification Rru_A0374 PWY-7533 gliotoxin biosynthesis Rru_A0385 PWY-4041 γ-glutamyl cycle Rru_A0385 PWY-5826 hypoglycin biosynthesis Rru_A0394 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Rru_A0396 PWY-2941 L-lysine biosynthesis II Rru_A0396 PWY-2942 L-lysine biosynthesis III Rru_A0396 PWY-5097 L-lysine biosynthesis VI Rru_A0397 PWY-4983 L-citrulline-nitric oxide cycle Rru_A0397 PWY-4984 urea cycle Rru_A0397 PWY-5 canavanine biosynthesis Rru_A0397 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Rru_A0397 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Rru_A0404 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Rru_A0404 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Rru_A0404 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Rru_A0404 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Rru_A0409 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Rru_A0415 PWY-4381 fatty acid biosynthesis initiation I Rru_A0415 PWY-6799 fatty acid biosynthesis (plant mitochondria) Rru_A0415 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Rru_A0416 PWY-5367 petroselinate biosynthesis Rru_A0416 PWY-5971 palmitate biosynthesis II (bacteria and plants) Rru_A0416 PWY-5973 cis-vaccenate biosynthesis Rru_A0416 PWY-5989 stearate biosynthesis II (bacteria and plants) Rru_A0416 PWY-5994 palmitate biosynthesis I (animals and fungi) Rru_A0416 PWY-6113 superpathway of mycolate biosynthesis Rru_A0416 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Rru_A0416 PWY-6519 8-amino-7-oxononanoate biosynthesis I Rru_A0416 PWY-6951 Rru_A0416|Rru_A0416|REF_jgi:Rru_A0416|GeneID:3833827 Rru_A0416 PWY-7053 docosahexaenoate biosynthesis I (lower eukaryotes) Rru_A0416 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Rru_A0416 PWYG-321 mycolate biosynthesis Rru_A0429 PWY-7221 guanosine ribonucleotides de novo biosynthesis Rru_A0442 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Rru_A0442 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Rru_A0454 PWY-5988 wound-induced proteolysis I Rru_A0454 PWY-6018 seed germination protein turnover Rru_A0463 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Rru_A0466 PWY-2781 cis-zeatin biosynthesis Rru_A0467 PWY-5101 L-isoleucine biosynthesis II Rru_A0467 PWY-5103 L-isoleucine biosynthesis III Rru_A0467 PWY-5104 L-isoleucine biosynthesis IV Rru_A0467 PWY-5938 (R)-acetoin biosynthesis I Rru_A0467 PWY-5939 (R)-acetoin biosynthesis II Rru_A0467 PWY-6389 (S)-acetoin biosynthesis Rru_A0467 PWY-7111 pyruvate fermentation to isobutanol (engineered) Rru_A0468 PWY-5101 L-isoleucine biosynthesis II Rru_A0468 PWY-5103 L-isoleucine biosynthesis III Rru_A0468 PWY-5104 L-isoleucine biosynthesis IV Rru_A0468 PWY-5938 (R)-acetoin biosynthesis I Rru_A0468 PWY-5939 (R)-acetoin biosynthesis II Rru_A0468 PWY-6389 (S)-acetoin biosynthesis Rru_A0468 PWY-7111 pyruvate fermentation to isobutanol (engineered) Rru_A0469 PWY-5101 L-isoleucine biosynthesis II Rru_A0469 PWY-5103 L-isoleucine biosynthesis III Rru_A0469 PWY-5104 L-isoleucine biosynthesis IV Rru_A0469 PWY-7111 pyruvate fermentation to isobutanol (engineered) Rru_A0485 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Rru_A0485 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Rru_A0486 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Rru_A0486 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Rru_A0487 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Rru_A0487 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Rru_A0503 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Rru_A0506 PWY-2661 trehalose biosynthesis V Rru_A0507 PWY-2661 trehalose biosynthesis V Rru_A0514 PWY-5686 UMP biosynthesis Rru_A0517 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Rru_A0517 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Rru_A0517 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Rru_A0518 PWY-6823 molybdenum cofactor biosynthesis Rru_A0526 PWY-7219 adenosine ribonucleotides de novo biosynthesis Rru_A0556 PWY-2201 folate transformations I Rru_A0556 PWY-5497 purine nucleobases degradation II (anaerobic) Rru_A0557 PWY-1722 formate reduction to 5,10-methylenetetrahydrofolate Rru_A0557 PWY-2201 folate transformations I Rru_A0557 PWY-3841 folate transformations II Rru_A0557 PWY-5030 L-histidine degradation III Rru_A0557 PWY-5497 purine nucleobases degradation II (anaerobic) Rru_A0557 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate Rru_A0569 PWY-3461 L-tyrosine biosynthesis II Rru_A0569 PWY-3462 L-phenylalanine biosynthesis II Rru_A0569 PWY-6120 L-tyrosine biosynthesis III Rru_A0569 PWY-6627 salinosporamide A biosynthesis Rru_A0570 PWY-6840 homoglutathione biosynthesis Rru_A0570 PWY-7255 ergothioneine biosynthesis I (bacteria) Rru_A0577 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Rru_A0577 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Rru_A0577 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Rru_A0595 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Rru_A0595 PWY-5723 Rubisco shunt Rru_A0595 PWY-6891 thiazole biosynthesis II (Bacillus) Rru_A0595 PWY-6892 thiazole biosynthesis I (E. coli) Rru_A0595 PWY-6901 superpathway of glucose and xylose degradation Rru_A0595 PWY-7560 methylerythritol phosphate pathway II Rru_A0596 PWY-1042 glycolysis IV (plant cytosol) Rru_A0596 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Rru_A0596 PWY-5484 glycolysis II (from fructose 6-phosphate) Rru_A0596 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Rru_A0596 PWY-7385 1,3-propanediol biosynthesis (engineered) Rru_A0607 PWY-6605 adenine and adenosine salvage II Rru_A0607 PWY-6610 adenine and adenosine salvage IV Rru_A0619 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Rru_A0619 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Rru_A0620 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Rru_A0620 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Rru_A0621 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Rru_A0621 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Rru_A0622 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Rru_A0622 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Rru_A0623 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Rru_A0623 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Rru_A0646 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Rru_A0646 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Rru_A0646 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Rru_A0656 PWY-5737 (5R)-carbapenem carboxylate biosynthesis Rru_A0656 PWY-6853 ethylene biosynthesis II (microbes) Rru_A0656 PWY-6922 L-Nδ-acetylornithine biosynthesis Rru_A0667 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Rru_A0667 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Rru_A0667 PWY-6269 adenosylcobalamin salvage from cobinamide II Rru_A0668 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Rru_A0668 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Rru_A0668 PWY-6269 adenosylcobalamin salvage from cobinamide II Rru_A0670 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Rru_A0670 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Rru_A0670 PWY-6269 adenosylcobalamin salvage from cobinamide II Rru_A0682 PWY-4081 glutathione redox reactions I Rru_A0683 PWY-6164 3-dehydroquinate biosynthesis I Rru_A0684 PWY-5381 pyridine nucleotide cycling (plants) Rru_A0687 PWY-5381 pyridine nucleotide cycling (plants) Rru_A0687 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde Rru_A0688 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Rru_A0695 PWY-5101 L-isoleucine biosynthesis II Rru_A0695 PWY-6871 3-methylbutanol biosynthesis Rru_A0708 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Rru_A0708 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Rru_A0708 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Rru_A0709 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Rru_A0709 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Rru_A0709 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Rru_A0710 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Rru_A0710 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Rru_A0710 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Rru_A0711 PWY-6123 inosine-5'-phosphate biosynthesis I Rru_A0711 PWY-6124 inosine-5'-phosphate biosynthesis II Rru_A0711 PWY-7234 inosine-5'-phosphate biosynthesis III Rru_A0716 PWY-6123 inosine-5'-phosphate biosynthesis I Rru_A0716 PWY-6124 inosine-5'-phosphate biosynthesis II Rru_A0716 PWY-7219 adenosine ribonucleotides de novo biosynthesis Rru_A0716 PWY-7234 inosine-5'-phosphate biosynthesis III Rru_A0742 PWY-5855 ubiquinol-7 biosynthesis (prokaryotic) Rru_A0742 PWY-5856 ubiquinol-9 biosynthesis (prokaryotic) Rru_A0742 PWY-5857 ubiquinol-10 biosynthesis (prokaryotic) Rru_A0742 PWY-5870 ubiquinol-8 biosynthesis (eukaryotic) Rru_A0742 PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) Rru_A0742 PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) Rru_A0742 PWY-5873 ubiquinol-7 biosynthesis (eukaryotic) Rru_A0742 PWY-6708 ubiquinol-8 biosynthesis (prokaryotic) Rru_A0742 PWY-7230 ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic) Rru_A0742 PWY-7233 ubiquinol-6 bypass biosynthesis (eukaryotic) Rru_A0743 PWY-2941 L-lysine biosynthesis II Rru_A0743 PWY-2942 L-lysine biosynthesis III Rru_A0743 PWY-5097 L-lysine biosynthesis VI Rru_A0743 PWY-6559 spermidine biosynthesis II Rru_A0743 PWY-6562 norspermidine biosynthesis Rru_A0743 PWY-7153 grixazone biosynthesis Rru_A0744 PWY-723 alkylnitronates degradation Rru_A0747 PWY-7560 methylerythritol phosphate pathway II Rru_A0749 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Rru_A0766 PWY-6610 adenine and adenosine salvage IV Rru_A0774 PWY-5344 L-homocysteine biosynthesis Rru_A0774 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Rru_A0777 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Rru_A0777 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Rru_A0784 PWY-5344 L-homocysteine biosynthesis Rru_A0784 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Rru_A0792 PWY-6936 seleno-amino acid biosynthesis Rru_A0792 PWY-7274 D-cycloserine biosynthesis Rru_A0909 PWY-5437 L-threonine degradation I Rru_A0909 PWY-7013 L-1,2-propanediol degradation Rru_A0917 PWY-5041 S-adenosyl-L-methionine cycle II Rru_A0917 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis Rru_A0920 PWY-5482 pyruvate fermentation to acetate II Rru_A0920 PWY-5485 pyruvate fermentation to acetate IV Rru_A0920 PWY-5497 purine nucleobases degradation II (anaerobic) Rru_A0947 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Rru_A0947 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Rru_A0948 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Rru_A0948 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Rru_A0949 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Rru_A0949 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Rru_A0950 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Rru_A0950 PWY-6385 peptidoglycan biosynthesis III (mycobacteria) Rru_A0950 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Rru_A0950 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Rru_A0952 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Rru_A0952 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Rru_A0953 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Rru_A0953 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Rru_A0953 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Rru_A0954 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Rru_A0954 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Rru_A0972 PWY-7303 3-dimethylallyl-4-hydroxybenzoate biosynthesis Rru_A0983 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Rru_A0994 PWY-6823 molybdenum cofactor biosynthesis Rru_A1036 PWY-5532 adenosine nucleotides degradation IV Rru_A1037 PWY-7399 methylphosphonate degradation II Rru_A1047 PWY-1042 glycolysis IV (plant cytosol) Rru_A1047 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Rru_A1047 PWY-5484 glycolysis II (from fructose 6-phosphate) Rru_A1047 PWY-7385 1,3-propanediol biosynthesis (engineered) Rru_A1050 PWY-6123 inosine-5'-phosphate biosynthesis I Rru_A1050 PWY-7234 inosine-5'-phosphate biosynthesis III Rru_A1068 PWY-6823 molybdenum cofactor biosynthesis Rru_A1068 PWY-6891 thiazole biosynthesis II (Bacillus) Rru_A1068 PWY-6892 thiazole biosynthesis I (E. coli) Rru_A1068 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis Rru_A1076 PWY-2301 myo-inositol biosynthesis Rru_A1076 PWY-4702 phytate degradation I Rru_A1076 PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation Rru_A1080 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Rru_A1080 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Rru_A1080 PWY-6897 thiamin salvage II Rru_A1080 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Rru_A1080 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Rru_A1080 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) Rru_A1080 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Rru_A1099 PWY-6614 tetrahydrofolate biosynthesis Rru_A1100 PWY-6749 CMP-legionaminate biosynthesis I Rru_A1102 PWY-6910 hydroxymethylpyrimidine salvage Rru_A1102 PWY-7356 thiamin salvage IV (yeast) Rru_A1102 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Rru_A1106 PWY-7219 adenosine ribonucleotides de novo biosynthesis Rru_A1121 PWY-5750 itaconate biosynthesis Rru_A1121 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Rru_A1121 PWY-6146 Methanobacterium thermoautotrophicum biosynthetic metabolism Rru_A1124 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Rru_A1124 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Rru_A1132 PWY-5958 acridone alkaloid biosynthesis Rru_A1132 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Rru_A1132 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Rru_A1141 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Rru_A1142 PWY-1622 formaldehyde assimilation I (serine pathway) Rru_A1142 PWY-181 photorespiration Rru_A1142 PWY-2161 folate polyglutamylation Rru_A1142 PWY-2201 folate transformations I Rru_A1142 PWY-3661 glycine betaine degradation I Rru_A1142 PWY-3661-1 glycine betaine degradation II (mammalian) Rru_A1142 PWY-3841 folate transformations II Rru_A1142 PWY-5497 purine nucleobases degradation II (anaerobic) Rru_A1145 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) Rru_A1145 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Rru_A1146 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Rru_A1146 PWY-7536 2-amino-3-hydroxycyclopent-2-enone biosynthesis Rru_A1183 PWY-2941 L-lysine biosynthesis II Rru_A1183 PWY-5097 L-lysine biosynthesis VI Rru_A1187 PWY-6829 tRNA methylation (yeast) Rru_A1187 PWY-7285 methylwyosine biosynthesis Rru_A1187 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Rru_A1191 PWY-7396 butanol and isobutanol biosynthesis (engineered) Rru_A1192 PWY-3781 aerobic respiration I (cytochrome c) Rru_A1192 PWY-6692 Fe(II) oxidation Rru_A1192 PWY-7082 ammonia oxidation IV (autotrophic ammonia oxidizers) Rru_A1192 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Rru_A1196 PWY-2941 L-lysine biosynthesis II Rru_A1196 PWY-2942 L-lysine biosynthesis III Rru_A1196 PWY-5097 L-lysine biosynthesis VI Rru_A1196 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Rru_A1196 PWY-6559 spermidine biosynthesis II Rru_A1196 PWY-6562 norspermidine biosynthesis Rru_A1196 PWY-7153 grixazone biosynthesis Rru_A1196 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Rru_A1199 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) Rru_A1199 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Rru_A1201 PWY-5741 ethylmalonyl-CoA pathway Rru_A1201 PWY-5744 glyoxylate assimilation Rru_A1201 PWY-6728 methylaspartate cycle Rru_A1204 PWY-3781 aerobic respiration I (cytochrome c) Rru_A1204 PWY-4302 aerobic respiration III (alternative oxidase pathway) Rru_A1204 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Rru_A1204 PWY-5690 TCA cycle II (plants and fungi) Rru_A1204 PWY-6728 methylaspartate cycle Rru_A1204 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Rru_A1204 PWY-7254 TCA cycle VII (acetate-producers) Rru_A1204 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Rru_A1205 PWY-3781 aerobic respiration I (cytochrome c) Rru_A1205 PWY-4302 aerobic respiration III (alternative oxidase pathway) Rru_A1205 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Rru_A1205 PWY-5690 TCA cycle II (plants and fungi) Rru_A1205 PWY-6728 methylaspartate cycle Rru_A1205 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Rru_A1205 PWY-7254 TCA cycle VII (acetate-producers) Rru_A1205 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Rru_A1210 PWY-1622 formaldehyde assimilation I (serine pathway) Rru_A1210 PWY-5392 reductive TCA cycle II Rru_A1210 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Rru_A1210 PWY-5690 TCA cycle II (plants and fungi) Rru_A1210 PWY-5913 TCA cycle VI (obligate autotrophs) Rru_A1210 PWY-6728 methylaspartate cycle Rru_A1210 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Rru_A1210 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Rru_A1210 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Rru_A1211 PWY-5392 reductive TCA cycle II Rru_A1211 PWY-5537 pyruvate fermentation to acetate V Rru_A1211 PWY-5538 pyruvate fermentation to acetate VI Rru_A1211 PWY-5690 TCA cycle II (plants and fungi) Rru_A1211 PWY-5913 TCA cycle VI (obligate autotrophs) Rru_A1211 PWY-6728 methylaspartate cycle Rru_A1211 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Rru_A1211 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Rru_A1212 PWY-5392 reductive TCA cycle II Rru_A1212 PWY-5537 pyruvate fermentation to acetate V Rru_A1212 PWY-5538 pyruvate fermentation to acetate VI Rru_A1212 PWY-5690 TCA cycle II (plants and fungi) Rru_A1212 PWY-5913 TCA cycle VI (obligate autotrophs) Rru_A1212 PWY-6728 methylaspartate cycle Rru_A1212 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Rru_A1212 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Rru_A1213 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA Rru_A1214 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA Rru_A1215 PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA Rru_A1215 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA Rru_A1224 PWY-7219 adenosine ribonucleotides de novo biosynthesis Rru_A1226 PWY-7219 adenosine ribonucleotides de novo biosynthesis Rru_A1234 PWY-1042 glycolysis IV (plant cytosol) Rru_A1234 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Rru_A1234 PWY-5484 glycolysis II (from fructose 6-phosphate) Rru_A1234 PWY-5723 Rubisco shunt Rru_A1234 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Rru_A1234 PWY-6886 1-butanol autotrophic biosynthesis Rru_A1234 PWY-6901 superpathway of glucose and xylose degradation Rru_A1234 PWY-7003 glycerol degradation to butanol Rru_A1234 PWY-7124 ethylene biosynthesis V (engineered) Rru_A1234 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Rru_A1237 PWY-5381 pyridine nucleotide cycling (plants) Rru_A1237 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde Rru_A1252 PWY-381 nitrate reduction II (assimilatory) Rru_A1252 PWY-5675 nitrate reduction V (assimilatory) Rru_A1252 PWY-6549 L-glutamine biosynthesis III Rru_A1252 PWY-6963 ammonia assimilation cycle I Rru_A1252 PWY-6964 ammonia assimilation cycle II Rru_A1253 PWY-381 nitrate reduction II (assimilatory) Rru_A1253 PWY-5675 nitrate reduction V (assimilatory) Rru_A1253 PWY-6549 L-glutamine biosynthesis III Rru_A1253 PWY-6963 ammonia assimilation cycle I Rru_A1253 PWY-6964 ammonia assimilation cycle II Rru_A1267 PWY-4261 glycerol degradation I Rru_A1276 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Rru_A1276 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Rru_A1276 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Rru_A1288 PWY-6823 molybdenum cofactor biosynthesis Rru_A1289 PWY-5491 diethylphosphate degradation Rru_A1299 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Rru_A1299 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Rru_A1301 PWY-5028 L-histidine degradation II Rru_A1301 PWY-5030 L-histidine degradation III Rru_A1303 PWY-5028 L-histidine degradation II Rru_A1303 PWY-5030 L-histidine degradation III Rru_A1304 PWY-5028 L-histidine degradation II Rru_A1304 PWY-5030 L-histidine degradation III Rru_A1309 PWY-1361 benzoyl-CoA degradation I (aerobic) Rru_A1309 PWY-5109 2-methylbutanoate biosynthesis Rru_A1309 PWY-5136 fatty acid β-oxidation II (peroxisome) Rru_A1309 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Rru_A1309 PWY-5177 glutaryl-CoA degradation Rru_A1309 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Rru_A1309 PWY-6435 4-hydroxybenzoate biosynthesis V Rru_A1309 PWY-6583 pyruvate fermentation to butanol I Rru_A1309 PWY-6863 pyruvate fermentation to hexanol Rru_A1309 PWY-6883 pyruvate fermentation to butanol II Rru_A1309 PWY-6944 androstenedione degradation Rru_A1309 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Rru_A1309 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Rru_A1309 PWY-7007 methyl ketone biosynthesis Rru_A1309 PWY-7046 4-coumarate degradation (anaerobic) Rru_A1309 PWY-7094 fatty acid salvage Rru_A1309 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Rru_A1309 PWY-735 jasmonic acid biosynthesis Rru_A1309 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Rru_A1319 PWY-5796 malonate decarboxylase activation Rru_A1320 PWY-6060 malonate degradation II (biotin-dependent) Rru_A1320 PWY-6339 syringate degradation Rru_A1321 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Rru_A1321 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Rru_A1322 PWY-5794 malonate degradation I (biotin-independent) Rru_A1322 PWY-6060 malonate degradation II (biotin-dependent) Rru_A1324 PWY-4381 fatty acid biosynthesis initiation I Rru_A1324 PWY-5743 3-hydroxypropanoate cycle Rru_A1324 PWY-5744 glyoxylate assimilation Rru_A1324 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Rru_A1324 PWY-6060 malonate degradation II (biotin-dependent) Rru_A1324 PWY-6679 jadomycin biosynthesis Rru_A1324 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Rru_A1325 PWY-4381 fatty acid biosynthesis initiation I Rru_A1325 PWY-5743 3-hydroxypropanoate cycle Rru_A1325 PWY-5744 glyoxylate assimilation Rru_A1325 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Rru_A1325 PWY-6060 malonate degradation II (biotin-dependent) Rru_A1325 PWY-6679 jadomycin biosynthesis Rru_A1325 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Rru_A1327 PWY-5796 malonate decarboxylase activation Rru_A1346 PWY-4261 glycerol degradation I Rru_A1349 PWY-4041 γ-glutamyl cycle Rru_A1349 PWY-5826 hypoglycin biosynthesis Rru_A1356 PWY-5506 methanol oxidation to formaldehyde IV Rru_A1357 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Rru_A1357 PWY-5723 Rubisco shunt Rru_A1358 PWY-1042 glycolysis IV (plant cytosol) Rru_A1358 PWY-5484 glycolysis II (from fructose 6-phosphate) Rru_A1358 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Rru_A1358 PWY-7003 glycerol degradation to butanol Rru_A1378 PWY-1281 sulfoacetaldehyde degradation I Rru_A1378 PWY-5482 pyruvate fermentation to acetate II Rru_A1378 PWY-5485 pyruvate fermentation to acetate IV Rru_A1378 PWY-5497 purine nucleobases degradation II (anaerobic) Rru_A1378 PWY-6637 sulfolactate degradation II Rru_A1379 PWY-5482 pyruvate fermentation to acetate II Rru_A1379 PWY-5485 pyruvate fermentation to acetate IV Rru_A1379 PWY-5497 purine nucleobases degradation II (anaerobic) Rru_A1390 PWY-4041 γ-glutamyl cycle Rru_A1410 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Rru_A1410 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Rru_A1427 PWY-5372 carbon tetrachloride degradation II Rru_A1427 PWY-6780 hydrogen production VI Rru_A1432 PWY-5316 nicotine biosynthesis Rru_A1432 PWY-5381 pyridine nucleotide cycling (plants) Rru_A1432 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde Rru_A1432 PWY-7342 superpathway of nicotine biosynthesis Rru_A1433 PWY-5316 nicotine biosynthesis Rru_A1433 PWY-7342 superpathway of nicotine biosynthesis Rru_A1434 PWY-5316 nicotine biosynthesis Rru_A1434 PWY-7342 superpathway of nicotine biosynthesis Rru_A1444 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Rru_A1444 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Rru_A1444 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Rru_A1444 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Rru_A1444 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Rru_A1444 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Rru_A1444 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Rru_A1444 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Rru_A1445 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Rru_A1445 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Rru_A1445 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Rru_A1445 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Rru_A1445 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Rru_A1445 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Rru_A1445 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Rru_A1445 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Rru_A1447 PWY-4621 arsenate detoxification II (glutaredoxin) Rru_A1461 PWY-6871 3-methylbutanol biosynthesis Rru_A1467 PWY-5482 pyruvate fermentation to acetate II Rru_A1467 PWY-5485 pyruvate fermentation to acetate IV Rru_A1467 PWY-5497 purine nucleobases degradation II (anaerobic) Rru_A1468 PWY-1281 sulfoacetaldehyde degradation I Rru_A1468 PWY-5482 pyruvate fermentation to acetate II Rru_A1468 PWY-5485 pyruvate fermentation to acetate IV Rru_A1468 PWY-5497 purine nucleobases degradation II (anaerobic) Rru_A1468 PWY-6637 sulfolactate degradation II Rru_A1493 PWY-7335 UDP-N-acetyl-α-D-mannosaminouronate biosynthesis Rru_A1508 PWY-4261 glycerol degradation I Rru_A1508 PWY-6118 glycerol-3-phosphate shuttle Rru_A1508 PWY-6952 glycerophosphodiester degradation Rru_A1530 PWY-2201 folate transformations I Rru_A1530 PWY-3841 folate transformations II Rru_A1531 PWY-2201 folate transformations I Rru_A1531 PWY-3841 folate transformations II Rru_A1542 PWY-5642 2,4-dinitrotoluene degradation Rru_A1542 PWY-6373 acrylate degradation Rru_A1543 PWY-5381 pyridine nucleotide cycling (plants) Rru_A1547 PWY-6938 NADH repair Rru_A1566 PWY-3781 aerobic respiration I (cytochrome c) Rru_A1566 PWY-4302 aerobic respiration III (alternative oxidase pathway) Rru_A1566 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Rru_A1566 PWY-6692 Fe(II) oxidation Rru_A1567 PWY-3781 aerobic respiration I (cytochrome c) Rru_A1567 PWY-4302 aerobic respiration III (alternative oxidase pathway) Rru_A1567 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Rru_A1567 PWY-6692 Fe(II) oxidation Rru_A1569 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Rru_A1569 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Rru_A1570 PWY-3961 phosphopantothenate biosynthesis II Rru_A1572 PWY-5743 3-hydroxypropanoate cycle Rru_A1572 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Rru_A1572 PWY-6728 methylaspartate cycle Rru_A1572 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Rru_A1592 PWY-7560 methylerythritol phosphate pathway II Rru_A1596 PWY-5971 palmitate biosynthesis II (bacteria and plants) Rru_A1596 PWY-5973 cis-vaccenate biosynthesis Rru_A1596 PWY-5989 stearate biosynthesis II (bacteria and plants) Rru_A1596 PWY-5994 palmitate biosynthesis I (animals and fungi) Rru_A1596 PWY-6113 superpathway of mycolate biosynthesis Rru_A1596 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Rru_A1596 PWY-6519 8-amino-7-oxononanoate biosynthesis I Rru_A1596 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Rru_A1596 PWYG-321 mycolate biosynthesis Rru_A1601 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Rru_A1605 PWY-2622 trehalose biosynthesis IV Rru_A1607 PWY-5941 glycogen degradation II (eukaryotic) Rru_A1607 PWY-6724 starch degradation II Rru_A1607 PWY-6737 starch degradation V Rru_A1607 PWY-7238 sucrose biosynthesis II Rru_A1613 PWY-6936 seleno-amino acid biosynthesis Rru_A1615 PWY-5350 thiosulfate disproportionation III (rhodanese) Rru_A1667 PWY-4381 fatty acid biosynthesis initiation I Rru_A1674 PWY-7560 methylerythritol phosphate pathway II Rru_A1692 PWY-6834 spermidine biosynthesis III Rru_A1703 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Rru_A1703 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Rru_A1703 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Rru_A1703 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Rru_A1703 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Rru_A1703 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Rru_A1704 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Rru_A1704 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Rru_A1718 PWY-5041 S-adenosyl-L-methionine cycle II Rru_A1718 PWY-6151 S-adenosyl-L-methionine cycle I Rru_A1718 PWY-6936 seleno-amino acid biosynthesis Rru_A1718 PWY-702 L-methionine biosynthesis II Rru_A1760 PWY-6854 ethylene biosynthesis III (microbes) Rru_A1769 PWY-5381 pyridine nucleotide cycling (plants) Rru_A1769 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Rru_A1769 PWY-6596 adenosine nucleotides degradation I Rru_A1769 PWY-6606 guanosine nucleotides degradation II Rru_A1769 PWY-6607 guanosine nucleotides degradation I Rru_A1769 PWY-6608 guanosine nucleotides degradation III Rru_A1769 PWY-7185 UTP and CTP dephosphorylation I Rru_A1770 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) Rru_A1782 PWY-6854 ethylene biosynthesis III (microbes) Rru_A1786 PWY-5101 L-isoleucine biosynthesis II Rru_A1786 PWY-5103 L-isoleucine biosynthesis III Rru_A1786 PWY-5104 L-isoleucine biosynthesis IV Rru_A1786 PWY-7111 pyruvate fermentation to isobutanol (engineered) Rru_A1804 PWY-5392 reductive TCA cycle II Rru_A1804 PWY-5537 pyruvate fermentation to acetate V Rru_A1804 PWY-5538 pyruvate fermentation to acetate VI Rru_A1804 PWY-5690 TCA cycle II (plants and fungi) Rru_A1804 PWY-5913 TCA cycle VI (obligate autotrophs) Rru_A1804 PWY-6728 methylaspartate cycle Rru_A1804 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Rru_A1804 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Rru_A1820 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Rru_A1820 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Rru_A1820 PWY-6896 thiamin salvage I Rru_A1820 PWY-6897 thiamin salvage II Rru_A1822 PWY-6167 flavin biosynthesis II (archaea) Rru_A1822 PWY-6168 flavin biosynthesis III (fungi) Rru_A1823 PWY-6167 flavin biosynthesis II (archaea) Rru_A1823 PWY-6168 flavin biosynthesis III (fungi) Rru_A1823 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Rru_A1824 PWY-6167 flavin biosynthesis II (archaea) Rru_A1824 PWY-6168 flavin biosynthesis III (fungi) Rru_A1824 PWY-7219 adenosine ribonucleotides de novo biosynthesis Rru_A1827 PWY-1622 formaldehyde assimilation I (serine pathway) Rru_A1827 PWY-181 photorespiration Rru_A1827 PWY-2161 folate polyglutamylation Rru_A1827 PWY-2201 folate transformations I Rru_A1827 PWY-3661 glycine betaine degradation I Rru_A1827 PWY-3661-1 glycine betaine degradation II (mammalian) Rru_A1827 PWY-3841 folate transformations II Rru_A1827 PWY-5497 purine nucleobases degradation II (anaerobic) Rru_A1832 PWY-5663 tetrahydrobiopterin biosynthesis I Rru_A1832 PWY-5664 tetrahydrobiopterin biosynthesis II Rru_A1832 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Rru_A1832 PWY-6703 preQ0 biosynthesis Rru_A1832 PWY-6983 tetrahydrobiopterin biosynthesis III Rru_A1832 PWY-7442 drosopterin and aurodrosopterin biosynthesis Rru_A1836 PWY-5344 L-homocysteine biosynthesis Rru_A1836 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Rru_A1837 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Rru_A1837 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Rru_A1858 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Rru_A1858 PWY-6148 tetrahydromethanopterin biosynthesis Rru_A1858 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Rru_A1858 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Rru_A1865 PWY-2941 L-lysine biosynthesis II Rru_A1865 PWY-2942 L-lysine biosynthesis III Rru_A1865 PWY-5097 L-lysine biosynthesis VI Rru_A1877 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Rru_A1877 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Rru_A1877 PWY-7382 lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast) Rru_A1878 PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA Rru_A1878 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA Rru_A1885 PWY-1042 glycolysis IV (plant cytosol) Rru_A1885 PWY-1622 formaldehyde assimilation I (serine pathway) Rru_A1885 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Rru_A1885 PWY-5484 glycolysis II (from fructose 6-phosphate) Rru_A1885 PWY-5723 Rubisco shunt Rru_A1885 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Rru_A1885 PWY-6886 1-butanol autotrophic biosynthesis Rru_A1885 PWY-6901 superpathway of glucose and xylose degradation Rru_A1885 PWY-7003 glycerol degradation to butanol Rru_A1885 PWY-7124 ethylene biosynthesis V (engineered) Rru_A1885 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Rru_A1886 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Rru_A1886 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Rru_A1887 PWY-7176 UTP and CTP de novo biosynthesis Rru_A1887 PWY-7177 UTP and CTP dephosphorylation II Rru_A1887 PWY-7185 UTP and CTP dephosphorylation I Rru_A1889 PWY-1042 glycolysis IV (plant cytosol) Rru_A1889 PWY-5484 glycolysis II (from fructose 6-phosphate) Rru_A1889 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Rru_A1889 PWY-7003 glycerol degradation to butanol Rru_A1891 PWY-5958 acridone alkaloid biosynthesis Rru_A1891 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Rru_A1891 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Rru_A1895 PWY-5958 acridone alkaloid biosynthesis Rru_A1895 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Rru_A1895 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Rru_A1928 PWY-6871 3-methylbutanol biosynthesis Rru_A1931 PWY-6683 sulfate reduction III (assimilatory) Rru_A1933 PWY-5194 siroheme biosynthesis Rru_A1933 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Rru_A1940 PWY-5074 mevalonate degradation Rru_A1943 PWY-4381 fatty acid biosynthesis initiation I Rru_A1943 PWY-5743 3-hydroxypropanoate cycle Rru_A1943 PWY-5744 glyoxylate assimilation Rru_A1943 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Rru_A1943 PWY-6679 jadomycin biosynthesis Rru_A1943 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Rru_A1957 PWY-6703 preQ0 biosynthesis Rru_A1959 PWY-6703 preQ0 biosynthesis Rru_A1963 PWY-6123 inosine-5'-phosphate biosynthesis I Rru_A1963 PWY-6124 inosine-5'-phosphate biosynthesis II Rru_A1963 PWY-7219 adenosine ribonucleotides de novo biosynthesis Rru_A1963 PWY-7234 inosine-5'-phosphate biosynthesis III Rru_A1964 PWY-7219 adenosine ribonucleotides de novo biosynthesis Rru_A1970 PWY-7310 D-glucosaminate degradation Rru_A1971 PWY-7077 N-acetyl-D-galactosamine degradation Rru_A1971 PWY-7395 D-galactosamine and N-acetyl-D-galactosamine degradation Rru_A1976 PWY-1341 phenylacetate degradation II (anaerobic) Rru_A1976 PWY-6318 L-phenylalanine degradation IV (mammalian, via side chain) Rru_A1992 PWY-4202 arsenate detoxification I (glutaredoxin) Rru_A1992 PWY-4621 arsenate detoxification II (glutaredoxin) Rru_A1996 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Rru_A1996 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Rru_A1998 PWY-5532 adenosine nucleotides degradation IV Rru_A1998 PWY-5723 Rubisco shunt Rru_A2008 PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis Rru_A2009 PWY-4261 glycerol degradation I Rru_A2010 PWY-6832 2-aminoethylphosphonate degradation II Rru_A2027 PWY-6823 molybdenum cofactor biosynthesis Rru_A2027 PWY-6891 thiazole biosynthesis II (Bacillus) Rru_A2027 PWY-6892 thiazole biosynthesis I (E. coli) Rru_A2027 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis Rru_A2029 PWY-6936 seleno-amino acid biosynthesis Rru_A2029 PWY-7274 D-cycloserine biosynthesis Rru_A2056 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Rru_A2056 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Rru_A2056 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Rru_A2056 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Rru_A2060 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Rru_A2060 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Rru_A2071 PWY-5642 2,4-dinitrotoluene degradation Rru_A2071 PWY-6373 acrylate degradation Rru_A2075 PWY-5344 L-homocysteine biosynthesis Rru_A2075 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Rru_A2079 PWY-381 nitrate reduction II (assimilatory) Rru_A2079 PWY-5675 nitrate reduction V (assimilatory) Rru_A2079 PWY-6549 L-glutamine biosynthesis III Rru_A2079 PWY-6963 ammonia assimilation cycle I Rru_A2079 PWY-6964 ammonia assimilation cycle II Rru_A2086 PWY-381 nitrate reduction II (assimilatory) Rru_A2086 PWY-5675 nitrate reduction V (assimilatory) Rru_A2086 PWY-6549 L-glutamine biosynthesis III Rru_A2086 PWY-6963 ammonia assimilation cycle I Rru_A2086 PWY-6964 ammonia assimilation cycle II Rru_A2115 PWY-6749 CMP-legionaminate biosynthesis I Rru_A2116 PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) Rru_A2117 PWY-3801 sucrose degradation II (sucrose synthase) Rru_A2117 PWY-6527 stachyose degradation Rru_A2117 PWY-6981 chitin biosynthesis Rru_A2117 PWY-7238 sucrose biosynthesis II Rru_A2117 PWY-7343 UDP-glucose biosynthesis Rru_A2129 PWY-5392 reductive TCA cycle II Rru_A2129 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Rru_A2129 PWY-5690 TCA cycle II (plants and fungi) Rru_A2129 PWY-5913 TCA cycle VI (obligate autotrophs) Rru_A2129 PWY-6728 methylaspartate cycle Rru_A2129 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Rru_A2129 PWY-7254 TCA cycle VII (acetate-producers) Rru_A2129 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Rru_A2159 PWY-6167 flavin biosynthesis II (archaea) Rru_A2165 PWY-5269 cardiolipin biosynthesis II Rru_A2165 PWY-5668 cardiolipin biosynthesis I Rru_A2167 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Rru_A2167 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Rru_A2167 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Rru_A2168 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Rru_A2168 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate Rru_A2169 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Rru_A2169 PWY-7176 UTP and CTP de novo biosynthesis Rru_A2169 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Rru_A2169 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Rru_A2169 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Rru_A2169 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Rru_A2169 PWY-7205 CMP phosphorylation Rru_A2169 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Rru_A2169 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Rru_A2169 PWY-7221 guanosine ribonucleotides de novo biosynthesis Rru_A2169 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Rru_A2169 PWY-7224 purine deoxyribonucleosides salvage Rru_A2169 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Rru_A2169 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Rru_A2173 PWY-5988 wound-induced proteolysis I Rru_A2173 PWY-6018 seed germination protein turnover Rru_A2184 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) Rru_A2184 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Rru_A2197 PWY-6167 flavin biosynthesis II (archaea) Rru_A2197 PWY-6168 flavin biosynthesis III (fungi) Rru_A2206 PWY-5392 reductive TCA cycle II Rru_A2206 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Rru_A2206 PWY-5690 TCA cycle II (plants and fungi) Rru_A2206 PWY-5913 TCA cycle VI (obligate autotrophs) Rru_A2206 PWY-6728 methylaspartate cycle Rru_A2206 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Rru_A2206 PWY-7254 TCA cycle VII (acetate-producers) Rru_A2206 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Rru_A2219 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Rru_A2219 PWY-6148 tetrahydromethanopterin biosynthesis Rru_A2219 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Rru_A2219 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Rru_A2221 PWY-5269 cardiolipin biosynthesis II Rru_A2221 PWY-5668 cardiolipin biosynthesis I Rru_A2222 PWY-6823 molybdenum cofactor biosynthesis Rru_A2223 PWY-5057 L-valine degradation II Rru_A2223 PWY-5076 L-leucine degradation III Rru_A2223 PWY-5078 L-isoleucine degradation II Rru_A2223 PWY-5101 L-isoleucine biosynthesis II Rru_A2223 PWY-5103 L-isoleucine biosynthesis III Rru_A2223 PWY-5104 L-isoleucine biosynthesis IV Rru_A2223 PWY-5108 L-isoleucine biosynthesis V Rru_A2242 PWY-1801 formaldehyde oxidation II (glutathione-dependent) Rru_A2244 PWY-5941 glycogen degradation II (eukaryotic) Rru_A2244 PWY-622 starch biosynthesis Rru_A2244 PWY-6731 starch degradation III Rru_A2244 PWY-6737 starch degradation V Rru_A2244 PWY-7238 sucrose biosynthesis II Rru_A2245 PWY-622 starch biosynthesis Rru_A2246 PWY-622 starch biosynthesis Rru_A2255 PWY-7183 pyrimidine nucleobases salvage I Rru_A2269 PWY-3081 L-lysine biosynthesis V Rru_A2269 PWY-6871 3-methylbutanol biosynthesis Rru_A2289 PWY-5278 sulfite oxidation III Rru_A2289 PWY-5340 sulfate activation for sulfonation Rru_A2289 PWY-6683 sulfate reduction III (assimilatory) Rru_A2289 PWY-6932 selenate reduction Rru_A2290 PWY-5278 sulfite oxidation III Rru_A2290 PWY-5340 sulfate activation for sulfonation Rru_A2290 PWY-6683 sulfate reduction III (assimilatory) Rru_A2290 PWY-6932 selenate reduction Rru_A2295 PWY-2661 trehalose biosynthesis V Rru_A2303 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation Rru_A2317 PWY-5750 itaconate biosynthesis Rru_A2317 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Rru_A2317 PWY-6146 Methanobacterium thermoautotrophicum biosynthetic metabolism Rru_A2320 PWY-5747 2-methylcitrate cycle II Rru_A2400 PWY-5532 adenosine nucleotides degradation IV Rru_A2400 PWY-5723 Rubisco shunt Rru_A2402 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Rru_A2402 PWY-5723 Rubisco shunt Rru_A2403 PWY-5484 glycolysis II (from fructose 6-phosphate) Rru_A2404 PWY-5723 Rubisco shunt Rru_A2405 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Rru_A2405 PWY-5723 Rubisco shunt Rru_A2405 PWY-6891 thiazole biosynthesis II (Bacillus) Rru_A2405 PWY-6892 thiazole biosynthesis I (E. coli) Rru_A2405 PWY-6901 superpathway of glucose and xylose degradation Rru_A2405 PWY-7560 methylerythritol phosphate pathway II Rru_A2409 PWY-5484 glycolysis II (from fructose 6-phosphate) Rru_A2421 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Rru_A2421 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Rru_A2424 PWY-4041 γ-glutamyl cycle Rru_A2424 PWY-5826 hypoglycin biosynthesis Rru_A2432 PWY-6891 thiazole biosynthesis II (Bacillus) Rru_A2432 PWY-6892 thiazole biosynthesis I (E. coli) Rru_A2433 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Rru_A2433 PWY-6416 quinate degradation II Rru_A2433 PWY-6707 gallate biosynthesis Rru_A2441 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Rru_A2441 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Rru_A2441 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Rru_A2441 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Rru_A2441 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Rru_A2441 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Rru_A2441 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Rru_A2441 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Rru_A2462 PWY-6840 homoglutathione biosynthesis Rru_A2462 PWY-7255 ergothioneine biosynthesis I (bacteria) Rru_A2465 PWY-1042 glycolysis IV (plant cytosol) Rru_A2465 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Rru_A2465 PWY-5484 glycolysis II (from fructose 6-phosphate) Rru_A2465 PWY-5723 Rubisco shunt Rru_A2465 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Rru_A2465 PWY-6886 1-butanol autotrophic biosynthesis Rru_A2465 PWY-6901 superpathway of glucose and xylose degradation Rru_A2465 PWY-7003 glycerol degradation to butanol Rru_A2465 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Rru_A2465 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Rru_A2466 PWY-5386 methylglyoxal degradation I Rru_A2479 PWY-5743 3-hydroxypropanoate cycle Rru_A2479 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Rru_A2479 PWY-6728 methylaspartate cycle Rru_A2479 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Rru_A2480 PWY-5743 3-hydroxypropanoate cycle Rru_A2480 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Rru_A2480 PWY-6728 methylaspartate cycle Rru_A2480 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Rru_A2486 PWY-2723 trehalose degradation V Rru_A2486 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Rru_A2486 PWY-5661 GDP-glucose biosynthesis Rru_A2486 PWY-7238 sucrose biosynthesis II Rru_A2486 PWY-7385 1,3-propanediol biosynthesis (engineered) Rru_A2489 PWY-5506 methanol oxidation to formaldehyde IV Rru_A2507 PWY-5686 UMP biosynthesis Rru_A2508 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Rru_A2508 PWY-7536 2-amino-3-hydroxycyclopent-2-enone biosynthesis Rru_A2570 PWY-6823 molybdenum cofactor biosynthesis Rru_A2570 PWY-6891 thiazole biosynthesis II (Bacillus) Rru_A2570 PWY-6892 thiazole biosynthesis I (E. coli) Rru_A2570 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis Rru_A2576 PWY-5067 glycogen biosynthesis II (from UDP-D-Glucose) Rru_A2576 PWY-622 starch biosynthesis Rru_A2605 PWY-6478 GDP-D-glycero-α-D-manno-heptose biosynthesis Rru_A2619 PWY-6891 thiazole biosynthesis II (Bacillus) Rru_A2619 PWY-6892 thiazole biosynthesis I (E. coli) Rru_A2619 PWY-7560 methylerythritol phosphate pathway II Rru_A2623 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Rru_A2624 PWY-5971 palmitate biosynthesis II (bacteria and plants) Rru_A2624 PWY-5973 cis-vaccenate biosynthesis Rru_A2624 PWY-5989 stearate biosynthesis II (bacteria and plants) Rru_A2624 PWY-6113 superpathway of mycolate biosynthesis Rru_A2624 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Rru_A2624 PWY-6519 8-amino-7-oxononanoate biosynthesis I Rru_A2624 PWY-7096 triclosan resistance Rru_A2624 PWYG-321 mycolate biosynthesis Rru_A2627 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) Rru_A2627 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Rru_A2651 PWY-5443 aminopropanol phosphate biosynthesis I Rru_A2667 PWY-7219 adenosine ribonucleotides de novo biosynthesis Rru_A2719 PWY-5081 L-tryptophan degradation VIII (to tryptophol) Rru_A2740 PWY-7335 UDP-N-acetyl-α-D-mannosaminouronate biosynthesis Rru_A2751 PWY-6825 phosphatidylcholine biosynthesis V Rru_A2791 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Rru_A2791 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Rru_A2791 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Rru_A2791 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation Rru_A2792 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Rru_A2794 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Rru_A2812 PWY-5964 guanylyl molybdenum cofactor biosynthesis Rru_A2815 PWY-6823 molybdenum cofactor biosynthesis Rru_A2885 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Rru_A2885 PWY-5686 UMP biosynthesis Rru_A2885 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Rru_A2886 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Rru_A2886 PWY-5686 UMP biosynthesis Rru_A2886 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Rru_A2916 PWY-6012 acyl carrier protein metabolism I Rru_A2916 PWY-6012-1 acyl carrier protein metabolism II (mammalian) Rru_A2931 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Rru_A2931 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Rru_A2936 PWY-5686 UMP biosynthesis Rru_A2947 PWY-3801 sucrose degradation II (sucrose synthase) Rru_A2947 PWY-5054 sorbitol biosynthesis I Rru_A2947 PWY-5384 sucrose degradation IV (sucrose phosphorylase) Rru_A2947 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Rru_A2947 PWY-5659 GDP-mannose biosynthesis Rru_A2947 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Rru_A2947 PWY-621 sucrose degradation III (sucrose invertase) Rru_A2947 PWY-622 starch biosynthesis Rru_A2947 PWY-6531 mannitol cycle Rru_A2947 PWY-6981 chitin biosynthesis Rru_A2947 PWY-7238 sucrose biosynthesis II Rru_A2947 PWY-7347 sucrose biosynthesis III Rru_A2947 PWY-7385 1,3-propanediol biosynthesis (engineered) Rru_A2956 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Rru_A2956 PWY-6549 L-glutamine biosynthesis III Rru_A2956 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Rru_A2956 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Rru_A2965 PWY-5523 5,6-dimethylbenzimidazole biosynthesis Rru_A2965 PWY-6167 flavin biosynthesis II (archaea) Rru_A2965 PWY-6168 flavin biosynthesis III (fungi) Rru_A2970 PWY-7376 cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation) Rru_A2974 PWY-101 photosynthesis light reactions Rru_A2974 PWY-6785 hydrogen production VIII Rru_A2975 PWY-101 photosynthesis light reactions Rru_A2975 PWY-6785 hydrogen production VIII Rru_A2978 PWY-5526 bacteriochlorophyll a biosynthesis Rru_A2978 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Rru_A2978 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Rru_A2979 PWY-5526 bacteriochlorophyll a biosynthesis Rru_A2979 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Rru_A2979 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Rru_A2980 PWY-5526 bacteriochlorophyll a biosynthesis Rru_A2992 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Rru_A2996 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Rru_A2997 PWY-1281 sulfoacetaldehyde degradation I Rru_A2997 PWY-5482 pyruvate fermentation to acetate II Rru_A2997 PWY-5485 pyruvate fermentation to acetate IV Rru_A2997 PWY-5497 purine nucleobases degradation II (anaerobic) Rru_A2997 PWY-6637 sulfolactate degradation II Rru_A2998 PWY-5482 pyruvate fermentation to acetate II Rru_A2998 PWY-5485 pyruvate fermentation to acetate IV Rru_A2998 PWY-5497 purine nucleobases degradation II (anaerobic) Rru_A3000 PWY-5480 pyruvate fermentation to ethanol I Rru_A3000 PWY-5485 pyruvate fermentation to acetate IV Rru_A3000 PWY-5493 reductive monocarboxylic acid cycle Rru_A3029 PWY-6749 CMP-legionaminate biosynthesis I Rru_A3030 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Rru_A3031 PWY-181 photorespiration Rru_A3053 PWY-702 L-methionine biosynthesis II Rru_A3062 PWY-5743 3-hydroxypropanoate cycle Rru_A3062 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Rru_A3062 PWY-6728 methylaspartate cycle Rru_A3062 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Rru_A3076 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Rru_A3076 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Rru_A3076 PWY-6268 adenosylcobalamin salvage from cobalamin Rru_A3076 PWY-6269 adenosylcobalamin salvage from cobinamide II Rru_A3079 PWY-1361 benzoyl-CoA degradation I (aerobic) Rru_A3079 PWY-5109 2-methylbutanoate biosynthesis Rru_A3079 PWY-5136 fatty acid β-oxidation II (peroxisome) Rru_A3079 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Rru_A3079 PWY-5177 glutaryl-CoA degradation Rru_A3079 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Rru_A3079 PWY-6435 4-hydroxybenzoate biosynthesis V Rru_A3079 PWY-6583 pyruvate fermentation to butanol I Rru_A3079 PWY-6863 pyruvate fermentation to hexanol Rru_A3079 PWY-6883 pyruvate fermentation to butanol II Rru_A3079 PWY-6944 androstenedione degradation Rru_A3079 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Rru_A3079 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Rru_A3079 PWY-7007 methyl ketone biosynthesis Rru_A3079 PWY-7046 4-coumarate degradation (anaerobic) Rru_A3079 PWY-7094 fatty acid salvage Rru_A3079 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Rru_A3079 PWY-735 jasmonic acid biosynthesis Rru_A3079 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Rru_A3093 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Rru_A3112 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Rru_A3112 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Rru_A3127 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) Rru_A3127 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Rru_A3162 PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) Rru_A3163 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Rru_A3163 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Rru_A3176 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Rru_A3190 PWY-5686 UMP biosynthesis Rru_A3191 PWY-5686 UMP biosynthesis Rru_A3226 PWY-5971 palmitate biosynthesis II (bacteria and plants) Rru_A3226 PWY-5973 cis-vaccenate biosynthesis Rru_A3226 PWY-5989 stearate biosynthesis II (bacteria and plants) Rru_A3226 PWY-6113 superpathway of mycolate biosynthesis Rru_A3226 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Rru_A3226 PWY-6519 8-amino-7-oxononanoate biosynthesis I Rru_A3226 PWY-7096 triclosan resistance Rru_A3226 PWYG-321 mycolate biosynthesis Rru_A3258 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Rru_A3258 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Rru_A3258 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Rru_A3258 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Rru_A3258 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Rru_A3258 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Rru_A3258 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Rru_A3258 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Rru_A3263 PWY-7303 3-dimethylallyl-4-hydroxybenzoate biosynthesis Rru_A3265 PWY-3461 L-tyrosine biosynthesis II Rru_A3265 PWY-3462 L-phenylalanine biosynthesis II Rru_A3265 PWY-6120 L-tyrosine biosynthesis III Rru_A3265 PWY-6627 salinosporamide A biosynthesis Rru_A3266 PWY-5344 L-homocysteine biosynthesis Rru_A3270 PWY-5386 methylglyoxal degradation I Rru_A3276 PWY-4981 L-proline biosynthesis II (from arginine) Rru_A3276 PWY-4984 urea cycle Rru_A3276 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Rru_A3281 PWY-3341 L-proline biosynthesis III Rru_A3281 PWY-4981 L-proline biosynthesis II (from arginine) Rru_A3281 PWY-6344 L-ornithine degradation II (Stickland reaction) Rru_A3289 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Rru_A3289 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Rru_A3289 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Rru_A3302 PWY-5767 Rru_A3302|Rru_A3302|REF_jgi:Rru_A3302|GeneID:3836749 Rru_A3318 PWY-4041 γ-glutamyl cycle Rru_A3318 PWY-5826 hypoglycin biosynthesis Rru_A3321 PWY-6654 phosphopantothenate biosynthesis III Rru_A3331 PWY-3781 aerobic respiration I (cytochrome c) Rru_A3331 PWY-4521 arsenite oxidation I (respiratory) Rru_A3331 PWY-6692 Fe(II) oxidation Rru_A3331 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Rru_A3332 PWY-3781 aerobic respiration I (cytochrome c) Rru_A3332 PWY-4521 arsenite oxidation I (respiratory) Rru_A3332 PWY-6692 Fe(II) oxidation Rru_A3332 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Rru_A3341 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Rru_A3341 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Rru_A3342 PWY-2941 L-lysine biosynthesis II Rru_A3342 PWY-2942 L-lysine biosynthesis III Rru_A3342 PWY-5097 L-lysine biosynthesis VI Rru_A3362 PWY-5194 siroheme biosynthesis Rru_A3362 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Rru_A3367 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Rru_A3367 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Rru_A3367 PWY-6268 adenosylcobalamin salvage from cobalamin Rru_A3367 PWY-6269 adenosylcobalamin salvage from cobinamide II Rru_A3384 PWY-5194 siroheme biosynthesis Rru_A3384 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Rru_A3388 PWY-5839 menaquinol-7 biosynthesis Rru_A3388 PWY-5851 demethylmenaquinol-9 biosynthesis Rru_A3388 PWY-5852 demethylmenaquinol-8 biosynthesis I Rru_A3388 PWY-5853 demethylmenaquinol-6 biosynthesis I Rru_A3388 PWY-5890 menaquinol-10 biosynthesis Rru_A3388 PWY-5891 menaquinol-11 biosynthesis Rru_A3388 PWY-5892 menaquinol-12 biosynthesis Rru_A3388 PWY-5895 menaquinol-13 biosynthesis Rru_A3396 PWY-6157 autoinducer AI-1 biosynthesis Rru_A3405 PWY-1801 formaldehyde oxidation II (glutathione-dependent) Rru_A3405 PWY-3162 L-tryptophan degradation V (side chain pathway) Rru_A3405 PWY-5057 L-valine degradation II Rru_A3405 PWY-5076 L-leucine degradation III Rru_A3405 PWY-5078 L-isoleucine degradation II Rru_A3405 PWY-5079 L-phenylalanine degradation III Rru_A3405 PWY-5082 L-methionine degradation III Rru_A3405 PWY-5480 pyruvate fermentation to ethanol I Rru_A3405 PWY-5486 pyruvate fermentation to ethanol II Rru_A3405 PWY-5751 phenylethanol biosynthesis Rru_A3405 PWY-6028 acetoin degradation Rru_A3405 PWY-6313 serotonin degradation Rru_A3405 PWY-6333 acetaldehyde biosynthesis I Rru_A3405 PWY-6342 noradrenaline and adrenaline degradation Rru_A3405 PWY-6587 pyruvate fermentation to ethanol III Rru_A3405 PWY-6802 salidroside biosynthesis Rru_A3405 PWY-6871 3-methylbutanol biosynthesis Rru_A3405 PWY-7013 L-1,2-propanediol degradation Rru_A3405 PWY-7111 pyruvate fermentation to isobutanol (engineered) Rru_A3405 PWY-7118 chitin degradation to ethanol Rru_A3405 PWY-7396 butanol and isobutanol biosynthesis (engineered) Rru_A3405 PWY-7557 dehydrodiconiferyl alcohol degradation Rru_A3406 PWY-1801 formaldehyde oxidation II (glutathione-dependent) Rru_A3407 PWY-1042 glycolysis IV (plant cytosol) Rru_A3407 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Rru_A3407 PWY-5484 glycolysis II (from fructose 6-phosphate) Rru_A3407 PWY-6531 mannitol cycle Rru_A3407 PWY-7385 1,3-propanediol biosynthesis (engineered) Rru_A3419 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Rru_A3424 PWY-5686 UMP biosynthesis Rru_A3430 PWY-4381 fatty acid biosynthesis initiation I Rru_A3430 PWY-5743 3-hydroxypropanoate cycle Rru_A3430 PWY-5744 glyoxylate assimilation Rru_A3430 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Rru_A3430 PWY-6679 jadomycin biosynthesis Rru_A3430 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Rru_A3431 PWY-2161 folate polyglutamylation Rru_A3439 PWY-101 photosynthesis light reactions Rru_A3439 PWY-7230 ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic) Rru_A3444 PWY-5041 S-adenosyl-L-methionine cycle II Rru_A3461 PWY-4261 glycerol degradation I Rru_A3466 PWY-3341 L-proline biosynthesis III Rru_A3466 PWY-4981 L-proline biosynthesis II (from arginine) Rru_A3466 PWY-6344 L-ornithine degradation II (Stickland reaction) Rru_A3466 PWY-6922 L-Nδ-acetylornithine biosynthesis Rru_A3467 PWY-4981 L-proline biosynthesis II (from arginine) Rru_A3518 PWY-6654 phosphopantothenate biosynthesis III Rru_A3536 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Rru_A3536 PWY-5523 5,6-dimethylbenzimidazole biosynthesis Rru_A3542 PWY-1281 sulfoacetaldehyde degradation I Rru_A3542 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Rru_A3542 PWY-5482 pyruvate fermentation to acetate II Rru_A3542 PWY-5485 pyruvate fermentation to acetate IV Rru_A3542 PWY-5497 purine nucleobases degradation II (anaerobic) Rru_A3542 PWY-6637 sulfolactate degradation II Rru_A3542 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Rru_A3546 PWY-5958 acridone alkaloid biosynthesis Rru_A3546 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Rru_A3546 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Rru_A3567 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Rru_A3567 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Rru_A3568 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Rru_A3568 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Rru_A3571 PWY-5667 CDP-diacylglycerol biosynthesis I Rru_A3571 PWY-5981 CDP-diacylglycerol biosynthesis III Rru_A3575 PWY-6672 cis-genanyl-CoA degradation Rru_A3575 PWY-7118 chitin degradation to ethanol Rru_A3581 PWY-7158 L-phenylalanine degradation V Rru_A3584 PWY-5669 phosphatidylethanolamine biosynthesis I Rru_A3585 PWY-5669 phosphatidylethanolamine biosynthesis I Rru_A3613 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Rru_A3616 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Rru_A3616 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Rru_A3619 PWY-7219 adenosine ribonucleotides de novo biosynthesis Rru_A3633 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Rru_A3633 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Rru_A3633 PWY-6897 thiamin salvage II Rru_A3633 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Rru_A3633 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Rru_A3633 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) Rru_A3633 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Rru_A3634 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Rru_A3637 PWY-6168 flavin biosynthesis III (fungi) Rru_A3637 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Rru_A3640 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation Rru_A3655 PWY-6123 inosine-5'-phosphate biosynthesis I Rru_A3655 PWY-6124 inosine-5'-phosphate biosynthesis II Rru_A3655 PWY-7234 inosine-5'-phosphate biosynthesis III Rru_A3657 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Rru_A3657 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Rru_A3657 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Rru_A3663 PWY-5022 4-aminobutanoate degradation V Rru_A3663 PWY-6728 methylaspartate cycle Rru_A3663 PWY-7126 ethylene biosynthesis IV Rru_A3673 PWY-6339 syringate degradation Rru_A3729 PWY-6167 flavin biosynthesis II (archaea) Rru_A3740 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Rru_A3741 PWY-6164 3-dehydroquinate biosynthesis I Rru_A3751 PWY-4983 L-citrulline-nitric oxide cycle Rru_A3751 PWY-4984 urea cycle Rru_A3751 PWY-5 canavanine biosynthesis Rru_A3751 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Rru_A3751 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Rru_A3762 PWY-6454 vancomycin resistance I Rru_A3762 PWY-6455 vancomycin resistance II Rru_A3776 PWY-5041 S-adenosyl-L-methionine cycle II Rru_A3776 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis Rru_A3787 PWY-723 alkylnitronates degradation Rru_A3794 PWY-6936 seleno-amino acid biosynthesis Rru_A3798 PWY-5839 menaquinol-7 biosynthesis Rru_A3798 PWY-5844 menaquinol-9 biosynthesis Rru_A3798 PWY-5849 menaquinol-6 biosynthesis Rru_A3798 PWY-5890 menaquinol-10 biosynthesis Rru_A3798 PWY-5891 menaquinol-11 biosynthesis Rru_A3798 PWY-5892 menaquinol-12 biosynthesis Rru_A3798 PWY-5895 menaquinol-13 biosynthesis