RPN_00015	SSF143968	UbiD C-terminal domain-like
RPN_00015	SSF50475	FMN-binding split barrel
RPN_00030	SSF56024	Phospholipase D/nuclease
RPN_00040	SSF56349	DNA breaking-rejoining enzymes
RPN_00045	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
RPN_00045	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RPN_00050	SSF52972	ITPase-like
RPN_00055	SSF50249	Nucleic acid-binding proteins
RPN_00130	SSF103515	Autotransporter
RPN_00135	SSF82657	BolA-like
RPN_00140	SSF81301	Nucleotidyltransferase
RPN_00145	SSF51735	NAD(P)-binding Rossmann-fold domains
RPN_00185	SSF102114	Radical SAM enzymes
RPN_00190	SSF53955	Lysozyme-like
RPN_00190	SSF56601	beta-lactamase/transpeptidase-like
RPN_00195	SSF56601	beta-lactamase/transpeptidase-like
RPN_00200	SSF56601	beta-lactamase/transpeptidase-like
RPN_00220	SSF47240	Ferritin-like
RPN_00225	SSF51905	FAD/NAD(P)-binding domain
RPN_00225	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RPN_00230	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
RPN_00235	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
RPN_00235	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
RPN_00235	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_00240	SSF52943	ATP synthase (F1-ATPase), gamma subunit
RPN_00245	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
RPN_00245	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
RPN_00245	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_00250	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
RPN_00255	SSF52016	LeuD/IlvD-like
RPN_00255	SSF53732	Aconitase iron-sulfur domain
RPN_00265	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
RPN_00265	SSF54292	2Fe-2S ferredoxin-like
RPN_00265	SSF54862	4Fe-4S ferredoxins
RPN_00275	SSF54862	4Fe-4S ferredoxins
RPN_00280	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_00305	SSF47413	lambda repressor-like DNA-binding domains
RPN_00315	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPN_00320	SSF56925	OMPA-like
RPN_00335	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_00345	SSF46589	tRNA-binding arm
RPN_00345	SSF55681	Class II aaRS and biotin synthetases
RPN_00355	SSF103473	MFS general substrate transporter
RPN_00365	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPN_00365	SSF51735	NAD(P)-binding Rossmann-fold domains
RPN_00365	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
RPN_00370	SSF89550	PHP domain-like
RPN_00390	SSF55973	S-adenosylmethionine synthetase
RPN_00395	SSF55973	S-adenosylmethionine synthetase
RPN_00400	SSF55973	S-adenosylmethionine synthetase
RPN_00405	SSF55973	S-adenosylmethionine synthetase
RPN_00410	SSF47807	5' to 3' exonuclease, C-terminal subdomain
RPN_00410	SSF53098	Ribonuclease H-like
RPN_00410	SSF56672	DNA/RNA polymerases
RPN_00410	SSF88723	PIN domain-like
RPN_00415	SSF47364	Domain of the SRP/SRP receptor G-proteins
RPN_00415	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_00425	SSF57829	Zn-binding ribosomal proteins
RPN_00430	SSF53901	Thiolase-like
RPN_00440	SSF103088	OmpA-like
RPN_00450	SSF53067	Actin-like ATPase domain
RPN_00460	SSF47413	lambda repressor-like DNA-binding domains
RPN_00465	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_00470	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_00485	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_00490	SSF53901	Thiolase-like
RPN_00495	SSF47336	ACP-like
RPN_00500	SSF51735	NAD(P)-binding Rossmann-fold domains
RPN_00505	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_00505	SSF54752	RecA protein, C-terminal domain
RPN_00510	SSF103473	MFS general substrate transporter
RPN_00515	SSF103473	MFS general substrate transporter
RPN_00535	SSF116878	TrmE connector domain
RPN_00535	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_00540	SSF51735	NAD(P)-binding Rossmann-fold domains
RPN_00540	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RPN_00555	SSF102829	Cell division protein ZapA-like
RPN_00560	SSF103473	MFS general substrate transporter
RPN_00580	SSF56281	Metallo-hydrolase/oxidoreductase
RPN_00590	SSF47413	lambda repressor-like DNA-binding domains
RPN_00595	SSF53633	Carbamate kinase-like
RPN_00595	SSF55021	ACT-like
RPN_00600	SSF110324	Ribosomal L27 protein-like
RPN_00605	SSF141091	L21p-like
RPN_00610	SSF101307	YutG-like
RPN_00620	SSF53822	Periplasmic binding protein-like I
RPN_00625	SSF53790	Tetrapyrrole methylase
RPN_00670	SSF48150	DNA-glycosylase
RPN_00675	SSF52833	Thioredoxin-like
RPN_00680	SSF53474	alpha/beta-Hydrolases
RPN_00685	SSF53383	PLP-dependent transferases
RPN_00690	SSF102114	Radical SAM enzymes
RPN_00700	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
RPN_00705	SSF55486	Metalloproteases ("zincins"), catalytic domain
RPN_00710	SSF54631	CBS-domain pair
RPN_00710	SSF56176	FAD-binding/transporter-associated domain-like
RPN_00720	SSF55811	Nudix
RPN_00730	SSF53474	alpha/beta-Hydrolases
RPN_00805	SSF52151	FabD/lysophospholipase-like
RPN_00805	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
RPN_00820	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_00830	SSF53098	Ribonuclease H-like
RPN_00835	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_00845	SSF101738	SspB-like
RPN_00850	SSF53098	Ribonuclease H-like
RPN_00895	SSF109604	HD-domain/PDEase-like
RPN_00900	SSF51713	tRNA-guanine transglycosylase
RPN_00910	SSF47781	RuvA domain 2-like
RPN_00910	SSF50249	Nucleic acid-binding proteins
RPN_00910	SSF52113	BRCT domain
RPN_00910	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
RPN_00915	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPN_00920	SSF51261	Duplicated hybrid motif
RPN_00925	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_00935	SSF52833	Thioredoxin-like
RPN_00940	SSF47162	Apolipoprotein
RPN_00945	SSF47729	IHF-like DNA-binding proteins
RPN_00950	SSF46955	Putative DNA-binding domain
RPN_00955	SSF51445	(Trans)glycosidases
RPN_00960	SSF81301	Nucleotidyltransferase
RPN_00965	SSF103515	Autotransporter
RPN_01010	SSF54631	CBS-domain pair
RPN_01010	SSF56176	FAD-binding/transporter-associated domain-like
RPN_01015	SSF54001	Cysteine proteinases
RPN_01020	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_01030	SSF103473	MFS general substrate transporter
RPN_01040	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_01040	SSF90123	ABC transporter transmembrane region
RPN_01045	SSF54786	YcfA/nrd intein domain
RPN_01050	SSF143100	TTHA1013/TTHA0281-like
RPN_01050	SSF47598	Ribbon-helix-helix
RPN_01055	SSF52402	Adenine nucleotide alpha hydrolases-like
RPN_01060	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPN_01065	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_01065	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RPN_01120	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPN_01150	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPN_01150	SSF50677	ValRS/IleRS/LeuRS editing domain
RPN_01150	SSF52374	Nucleotidylyl transferase
RPN_01175	SSF103473	MFS general substrate transporter
RPN_01180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_01185	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPN_01185	SSF52374	Nucleotidylyl transferase
RPN_01190	SSF51556	Metallo-dependent hydrolases
RPN_01245	SSF53448	Nucleotide-diphospho-sugar transferases
RPN_01250	SSF46946	S13-like H2TH domain
RPN_01250	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RPN_01250	SSF81624	N-terminal domain of MutM-like DNA repair proteins
RPN_01255	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPN_01260	SSF56112	Protein kinase-like (PK-like)
RPN_01295	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_01300	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_01310	SSF56219	DNase I-like
RPN_01340	SSF109998	Triger factor/SurA peptide-binding domain-like
RPN_01345	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPN_01350	SSF50249	Nucleic acid-binding proteins
RPN_01355	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_01360	SSF103473	MFS general substrate transporter
RPN_01365	SSF110836	Hypothetical protein SAV1430
RPN_01365	SSF117916	Fe-S cluster assembly (FSCA) domain-like
RPN_01370	SSF49772	Ecotin, trypsin inhibitor
RPN_01380	SSF52490	Tubulin nucleotide-binding domain-like
RPN_01380	SSF55307	Tubulin C-terminal domain-like
RPN_01385	SSF88723	PIN domain-like
RPN_01390	SSF143120	YefM-like
RPN_01395	SSF48557	L-aspartase-like
RPN_01405	SSF55315	L30e-like
RPN_01405	SSF75217	alpha/beta knot
RPN_01410	SSF50447	Translation proteins
RPN_01410	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
RPN_01410	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_01420	SSF54999	Ribosomal protein S10
RPN_01425	SSF50447	Translation proteins
RPN_01430	SSF52166	Ribosomal protein L4
RPN_01435	SSF54189	Ribosomal proteins S24e, L23 and L15e
RPN_01440	SSF50104	Translation proteins SH3-like domain
RPN_01440	SSF50249	Nucleic acid-binding proteins
RPN_01445	SSF54570	Ribosomal protein S19
RPN_01450	SSF54843	Ribosomal protein L22
RPN_01455	SSF54814	Prokaryotic type KH domain (KH-domain type II)
RPN_01455	SSF54821	Ribosomal protein S3 C-terminal domain
RPN_01460	SSF54686	Ribosomal protein L16p/L10e
RPN_01465	SSF46561	Ribosomal protein L29 (L29p)
RPN_01470	SSF50249	Nucleic acid-binding proteins
RPN_01475	SSF50193	Ribosomal protein L14
RPN_01480	SSF50104	Translation proteins SH3-like domain
RPN_01485	SSF55282	RL5-like
RPN_01490	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RPN_01495	SSF56047	Ribosomal protein S8
RPN_01500	SSF56053	Ribosomal protein L6
RPN_01505	SSF53137	Translational machinery components
RPN_01510	SSF54211	Ribosomal protein S5 domain 2-like
RPN_01510	SSF54768	dsRNA-binding domain-like
RPN_01515	SSF55129	Ribosomal protein L30p/L7e
RPN_01520	SSF52080	Ribosomal proteins L15p and L18e
RPN_01525	SSF103491	Preprotein translocase SecY subunit
RPN_01530	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_01530	SSF57774	Microbial and mitochondrial ADK, insert "zinc finger" domain
RPN_01535	SSF46946	S13-like H2TH domain
RPN_01540	SSF53137	Translational machinery components
RPN_01545	SSF47789	C-terminal domain of RNA polymerase alpha subunit
RPN_01545	SSF55257	RBP11-like subunits of RNA polymerase
RPN_01545	SSF56553	Insert subdomain of RNA polymerase alpha subunit
RPN_01550	SSF64263	Prokaryotic ribosomal protein L17
RPN_01555	SSF46992	Ribosomal protein S20
RPN_01560	SSF109604	HD-domain/PDEase-like
RPN_01565	SSF103473	MFS general substrate transporter
RPN_01605	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_01615	SSF51064	Head domain of nucleotide exchange factor GrpE
RPN_01615	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
RPN_01620	SSF54211	Ribosomal protein S5 domain 2-like
RPN_01620	SSF55666	Ribonuclease PH domain 2-like
RPN_01665	SSF50129	GroES-like
RPN_01670	SSF48592	GroEL equatorial domain-like
RPN_01670	SSF52029	GroEL apical domain-like
RPN_01670	SSF54849	GroEL-intermediate domain like
RPN_01685	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
RPN_01685	SSF52374	Nucleotidylyl transferase
RPN_01690	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPN_01695	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RPN_01700	SSF159894	YgaC/TfoX-N like
RPN_01705	SSF103473	MFS general substrate transporter
RPN_01705	SSF56801	Acetyl-CoA synthetase-like
RPN_01705	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
RPN_01715	SSF52096	ClpP/crotonase
RPN_01720	SSF51230	Single hybrid motif
RPN_01720	SSF51246	Rudiment single hybrid motif
RPN_01720	SSF52440	PreATP-grasp domain
RPN_01720	SSF56059	Glutathione synthetase ATP-binding domain-like
RPN_01730	SSF48452	TPR-like
RPN_01745	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPN_01745	SSF50677	ValRS/IleRS/LeuRS editing domain
RPN_01745	SSF52374	Nucleotidylyl transferase
RPN_01775	SSF158472	HAMP domain-like
RPN_01775	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPN_01775	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPN_01785	SSF56112	Protein kinase-like (PK-like)
RPN_01805	SSF143865	CorA soluble domain-like
RPN_01805	SSF144083	Magnesium transport protein CorA, transmembrane region
RPN_01825	SSF140860	Pseudo ankyrin repeat-like
RPN_01830	SSF54211	Ribosomal protein S5 domain 2-like
RPN_01840	SSF74731	Ribosomal protein L20
RPN_01845	SSF143034	L35p-like
RPN_01850	SSF102114	Radical SAM enzymes
RPN_01855	SSF50715	Ribosomal protein L25-like
RPN_01860	SSF53178	Peptidyl-tRNA hydrolase-like
RPN_01870	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPN_01875	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_01875	SSF81271	TGS-like
RPN_01880	SSF81301	Nucleotidyltransferase
RPN_01905	SSF52151	FabD/lysophospholipase-like
RPN_01940	SSF48295	TrpR-like
RPN_01940	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_01945	SSF52821	Rhodanese/Cell cycle control phosphatase
RPN_01950	SSF109910	YgfY-like
RPN_01955	SSF141259	CarD-like
RPN_01955	SSF143517	TRCF domain-like
RPN_01955	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_01960	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPN_01960	SSF53623	MurD-like peptide ligases, catalytic domain
RPN_01960	SSF63418	MurE/MurF N-terminal domain
RPN_01965	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPN_01965	SSF53623	MurD-like peptide ligases, catalytic domain
RPN_01965	SSF63418	MurE/MurF N-terminal domain
RPN_01980	SSF52218	Flavoproteins
RPN_01985	SSF52218	Flavoproteins
RPN_01990	SSF100950	NagB/RpiA/CoA transferase-like
RPN_01995	SSF100950	NagB/RpiA/CoA transferase-like
RPN_02015	SSF50249	Nucleic acid-binding proteins
RPN_02015	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_02035	SSF50324	Inorganic pyrophosphatase
RPN_02040	SSF82093	Heme chaperone CcmE
RPN_02045	SSF52833	Thioredoxin-like
RPN_02050	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPN_02095	SSF109604	HD-domain/PDEase-like
RPN_02105	SSF158791	MgtE N-terminal domain-like
RPN_02105	SSF161093	MgtE membrane domain-like
RPN_02105	SSF54631	CBS-domain pair
RPN_02110	SSF56784	HAD-like
RPN_02115	SSF54211	Ribosomal protein S5 domain 2-like
RPN_02115	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPN_02115	SSF56719	Type II DNA topoisomerase
RPN_02120	SSF55205	EPT/RTPC-like
RPN_02125	SSF63562	RPB6/omega subunit-like
RPN_02130	SSF56214	4'-phosphopantetheinyl transferase
RPN_02135	SSF54534	FKBP-like
RPN_02140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_02140	SSF81767	Pre-protein crosslinking domain of SecA
RPN_02140	SSF81886	Helical scaffold and wing domains of SecA
RPN_02145	SSF48403	Ankyrin repeat
RPN_02180	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
RPN_02180	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
RPN_02185	SSF57884	Ada DNA repair protein, N-terminal domain (N-Ada 10)
RPN_02200	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
RPN_02205	SSF48371	ARM repeat
RPN_02210	SSF110087	DR1885-like metal-binding protein
RPN_02215	SSF46600	C-terminal UvrC-binding domain of UvrB
RPN_02215	SSF47781	RuvA domain 2-like
RPN_02215	SSF82771	GIY-YIG endonuclease
RPN_02230	SSF89447	AbrB/MazE/MraZ-like
RPN_02235	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPN_02235	SSF81799	Putative methyltransferase TM0872, insert domain
RPN_02245	SSF56519	Penicillin binding protein dimerisation domain
RPN_02245	SSF56601	beta-lactamase/transpeptidase-like
RPN_02255	SSF56519	Penicillin binding protein dimerisation domain
RPN_02255	SSF56601	beta-lactamase/transpeptidase-like
RPN_02265	SSF141571	Pentapeptide repeat-like
RPN_02270	SSF46689	Homeodomain-like
RPN_02270	SSF52172	CheY-like
RPN_02270	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_02280	SSF51905	FAD/NAD(P)-binding domain
RPN_02300	SSF52047	RNI-like
RPN_02355	SSF52374	Nucleotidylyl transferase
RPN_02355	SSF55174	Alpha-L RNA-binding motif
RPN_02360	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPN_02360	SSF55174	Alpha-L RNA-binding motif
RPN_02365	SSF46785	"Winged helix" DNA-binding domain
RPN_02380	SSF74942	YhbC-like, C-terminal domain
RPN_02380	SSF75420	YhbC-like, N-terminal domain
RPN_02385	SSF47794	Rad51 N-terminal domain-like
RPN_02385	SSF50249	Nucleic acid-binding proteins
RPN_02385	SSF54814	Prokaryotic type KH domain (KH-domain type II)
RPN_02385	SSF69705	Transcription factor NusA, N-terminal domain
RPN_02390	SSF50447	Translation proteins
RPN_02390	SSF52156	Initiation factor IF2/eIF5b, domain 3
RPN_02390	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_02400	SSF53067	Actin-like ATPase domain
RPN_02410	SSF50249	Nucleic acid-binding proteins
RPN_02410	SSF57863	ArfGap/RecO-like zinc finger
RPN_02420	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_02420	SSF54211	Ribosomal protein S5 domain 2-like
RPN_02425	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPN_02430	SSF141571	Pentapeptide repeat-like
RPN_02435	SSF55120	Pseudouridine synthase
RPN_02435	SSF55174	Alpha-L RNA-binding motif
RPN_02460	SSF48024	N-terminal domain of DnaB helicase
RPN_02460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_02470	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
RPN_02475	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_02490	SSF51569	Aldolase
RPN_02535	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_02545	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPN_02550	SSF101386	all-alpha NTP pyrophosphatases
RPN_02570	SSF53448	Nucleotide-diphospho-sugar transferases
RPN_02575	SSF75625	YebC-like
RPN_02580	SSF57840	Ribosomal protein L36
RPN_02600	SSF53955	Lysozyme-like
RPN_02620	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPN_02630	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPN_02635	SSF51905	FAD/NAD(P)-binding domain
RPN_02635	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RPN_02640	SSF100950	NagB/RpiA/CoA transferase-like
RPN_02650	SSF47819	HRDC-like
RPN_02650	SSF53098	Ribonuclease H-like
RPN_02660	SSF103025	Folate-binding domain
RPN_02670	SSF48403	Ankyrin repeat
RPN_02685	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPN_02690	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPN_02695	SSF141986	LD-carboxypeptidase A C-terminal domain-like
RPN_02695	SSF52317	Class I glutamine amidotransferase-like
RPN_02700	SSF53850	Periplasmic binding protein-like II
RPN_02700	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
RPN_02735	SSF47413	lambda repressor-like DNA-binding domains
RPN_02740	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_02745	SSF50249	Nucleic acid-binding proteins
RPN_02750	SSF52096	ClpP/crotonase
RPN_02755	SSF51395	FMN-linked oxidoreductases
RPN_02770	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPN_02815	SSF46785	"Winged helix" DNA-binding domain
RPN_02820	SSF53383	PLP-dependent transferases
RPN_02825	SSF53383	PLP-dependent transferases
RPN_02830	SSF82649	SufE/NifU
RPN_02835	SSF89360	HesB-like domain
RPN_02850	SSF53092	Creatinase/prolidase N-terminal domain
RPN_02850	SSF55920	Creatinase/aminopeptidase
RPN_02855	SSF48576	Terpenoid synthases
RPN_02885	SSF103473	MFS general substrate transporter
RPN_02900	SSF69618	HemD-like
RPN_02910	SSF81901	HCP-like
RPN_02915	SSF53474	alpha/beta-Hydrolases
RPN_02930	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
RPN_02935	SSF52374	Nucleotidylyl transferase
RPN_02990	SSF47729	IHF-like DNA-binding proteins
RPN_02995	SSF52096	ClpP/crotonase
RPN_03000	SSF50249	Nucleic acid-binding proteins
RPN_03000	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_03000	SSF68912	Rho N-terminal domain-like
RPN_03005	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPN_03010	SSF64182	DHH phosphoesterases
RPN_03015	SSF75620	Release factor
RPN_03020	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
RPN_03020	SSF51230	Single hybrid motif
RPN_03020	SSF52777	CoA-dependent acyltransferases
RPN_03025	SSF54364	Translation initiation factor IF3, N-terminal domain
RPN_03025	SSF55200	Translation initiation factor IF3, C-terminal domain
RPN_03055	SSF55681	Class II aaRS and biotin synthetases
RPN_03080	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
RPN_03080	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
RPN_03085	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPN_03085	SSF53623	MurD-like peptide ligases, catalytic domain
RPN_03095	SSF52317	Class I glutamine amidotransferase-like
RPN_03100	SSF47616	GST C-terminal domain-like
RPN_03100	SSF52833	Thioredoxin-like
RPN_03105	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPN_03105	SSF52009	Phosphohistidine domain
RPN_03105	SSF56059	Glutathione synthetase ATP-binding domain-like
RPN_03115	SSF53639	AraD/HMP-PK domain-like
RPN_03120	SSF88723	PIN domain-like
RPN_03130	SSF56420	Peptide deformylase
RPN_03135	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
RPN_03140	SSF55931	Glutamine synthetase/guanido kinase
RPN_03150	SSF47413	lambda repressor-like DNA-binding domains
RPN_03165	SSF55120	Pseudouridine synthase
RPN_03170	SSF47060	S15/NS1 RNA-binding domain
RPN_03175	SSF46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
RPN_03175	SSF50249	Nucleic acid-binding proteins
RPN_03175	SSF54211	Ribosomal protein S5 domain 2-like
RPN_03175	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
RPN_03175	SSF55666	Ribonuclease PH domain 2-like
RPN_03180	SSF53697	SIS domain
RPN_03195	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_03200	SSF53738	Phosphoglucomutase, first 3 domains
RPN_03200	SSF55957	Phosphoglucomutase, C-terminal domain
RPN_03210	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_03235	SSF141571	Pentapeptide repeat-like
RPN_03240	SSF47240	Ferritin-like
RPN_03250	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
RPN_03250	SSF51998	PFL-like glycyl radical enzymes
RPN_03300	SSF49354	PapD-like
RPN_03320	SSF51905	FAD/NAD(P)-binding domain
RPN_03325	SSF51735	NAD(P)-binding Rossmann-fold domains
RPN_03325	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RPN_03340	SSF69754	Ribosome binding protein Y (YfiA homologue)
RPN_03380	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_03380	SSF54211	Ribosomal protein S5 domain 2-like
RPN_03380	SSF88697	PUA domain-like
RPN_03385	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPN_03410	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_03415	SSF53448	Nucleotide-diphospho-sugar transferases
RPN_03430	SSF53720	ALDH-like
RPN_03435	SSF51905	FAD/NAD(P)-binding domain
RPN_03440	SSF53474	alpha/beta-Hydrolases
RPN_03450	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPN_03450	SSF51735	NAD(P)-binding Rossmann-fold domains
RPN_03455	SSF56281	Metallo-hydrolase/oxidoreductase
RPN_03460	SSF111331	NAD kinase/diacylglycerol kinase-like
RPN_03490	SSF111304	Recombination protein RecR
RPN_03505	SSF89919	Ribosome-binding factor A, RbfA
RPN_03520	SSF54427	NTF2-like
RPN_03525	SSF53474	alpha/beta-Hydrolases
RPN_03525	SSF82171	DPP6 N-terminal domain-like
RPN_03530	SSF81342	Transmembrane di-heme cytochromes
RPN_03540	SSF89447	AbrB/MazE/MraZ-like
RPN_03555	SSF52210	Succinyl-CoA synthetase domains
RPN_03555	SSF56059	Glutathione synthetase ATP-binding domain-like
RPN_03560	SSF51735	NAD(P)-binding Rossmann-fold domains
RPN_03560	SSF52210	Succinyl-CoA synthetase domains
RPN_03565	SSF52833	Thioredoxin-like
RPN_03570	SSF74982	Small protein B (SmpB)
RPN_03575	SSF51569	Aldolase
RPN_03580	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
RPN_03585	SSF46894	C-terminal effector domain of the bipartite response regulators
RPN_03585	SSF52172	CheY-like
RPN_03590	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPN_03590	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPN_03595	SSF64005	Undecaprenyl diphosphate synthase
RPN_03610	SSF53098	Ribonuclease H-like
RPN_03620	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPN_03620	SSF50677	ValRS/IleRS/LeuRS editing domain
RPN_03620	SSF52374	Nucleotidylyl transferase
RPN_03640	SSF55979	DNA clamp
RPN_03645	SSF46955	Putative DNA-binding domain
RPN_03645	SSF50249	Nucleic acid-binding proteins
RPN_03645	SSF54991	Anticodon-binding domain of PheRS
RPN_03645	SSF55681	Class II aaRS and biotin synthetases
RPN_03645	SSF56037	PheT/TilS domain
RPN_03650	SSF46589	tRNA-binding arm
RPN_03650	SSF55681	Class II aaRS and biotin synthetases
RPN_03655	SSF102114	Radical SAM enzymes
RPN_03660	SSF54506	Diaminopimelate epimerase-like
RPN_03680	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPN_03710	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPN_03715	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPN_03720	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPN_03725	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPN_03725	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPN_03730	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPN_03760	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPN_03770	SSF51984	MurCD N-terminal domain
RPN_03770	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPN_03770	SSF53623	MurD-like peptide ligases, catalytic domain
RPN_03785	SSF51261	Duplicated hybrid motif
RPN_03790	SSF49503	Cupredoxins
RPN_03790	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
RPN_03795	SSF51161	Trimeric LpxA-like enzymes
RPN_03800	SSF81442	Cytochrome c oxidase subunit I-like
RPN_03805	SSF52317	Class I glutamine amidotransferase-like
RPN_03815	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_03815	SSF52980	Restriction endonuclease-like
RPN_03820	SSF141986	LD-carboxypeptidase A C-terminal domain-like
RPN_03820	SSF52317	Class I glutamine amidotransferase-like
RPN_03830	SSF48435	Bacterial muramidases
RPN_03830	SSF53955	Lysozyme-like
RPN_03835	SSF51283	dUTPase-like
RPN_03840	SSF52096	ClpP/crotonase
RPN_03845	SSF52833	Thioredoxin-like
RPN_03850	SSF49482	Aromatic compound dioxygenase
RPN_03855	SSF54534	FKBP-like
RPN_03860	SSF49503	Cupredoxins
RPN_03880	SSF50685	Barwin-like endoglucanases
RPN_03885	SSF56601	beta-lactamase/transpeptidase-like
RPN_03890	SSF103473	MFS general substrate transporter
RPN_03895	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_03895	SSF90123	ABC transporter transmembrane region
RPN_03900	SSF46785	"Winged helix" DNA-binding domain
RPN_03900	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_03915	SSF46929	DNA helicase RuvA subunit, C-terminal domain
RPN_03915	SSF47781	RuvA domain 2-like
RPN_03915	SSF50249	Nucleic acid-binding proteins
RPN_03925	SSF140931	Fic-like
RPN_03930	SSF52954	Class II aaRS ABD-related
RPN_03930	SSF55681	Class II aaRS and biotin synthetases
RPN_03935	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RPN_03940	SSF81442	Cytochrome c oxidase subunit I-like
RPN_03955	SSF53448	Nucleotide-diphospho-sugar transferases
RPN_03960	SSF52317	Class I glutamine amidotransferase-like
RPN_03960	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_03980	SSF51735	NAD(P)-binding Rossmann-fold domains
RPN_03980	SSF56327	LDH C-terminal domain-like
RPN_04025	SSF103473	MFS general substrate transporter
RPN_04030	SSF89447	AbrB/MazE/MraZ-like
RPN_04035	SSF88723	PIN domain-like
RPN_04050	SSF51735	NAD(P)-binding Rossmann-fold domains
RPN_04050	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RPN_04050	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPN_04060	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
RPN_04060	SSF52374	Nucleotidylyl transferase
RPN_04065	SSF158442	DsbB-like
RPN_04080	SSF48403	Ankyrin repeat
RPN_04090	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_04100	SSF53822	Periplasmic binding protein-like I
RPN_04105	SSF47090	PGBD-like
RPN_04105	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
RPN_04115	SSF56317	Carbon-nitrogen hydrolase
RPN_04120	SSF51735	NAD(P)-binding Rossmann-fold domains
RPN_04135	SSF56349	DNA breaking-rejoining enzymes
RPN_04170	SSF56770	HydA/Nqo6-like
RPN_04175	SSF143243	Nqo5-like
RPN_04180	SSF56762	HydB/Nqo4-like
RPN_04185	SSF52833	Thioredoxin-like
RPN_04200	SSF54909	Dimeric alpha+beta barrel
RPN_04205	SSF50486	FMT C-terminal domain-like
RPN_04225	SSF116842	XseB-like
RPN_04235	SSF50346	PRC-barrel domain
RPN_04235	SSF50447	Translation proteins
RPN_04245	SSF48439	Protein prenylyltransferase
RPN_04265	SSF55174	Alpha-L RNA-binding motif
RPN_04285	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPN_04290	SSF53474	alpha/beta-Hydrolases
RPN_04300	SSF111369	HlyD-like secretion proteins
RPN_04305	SSF53448	Nucleotide-diphospho-sugar transferases
RPN_04310	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPN_04315	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPN_04320	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPN_04325	SSF51735	NAD(P)-binding Rossmann-fold domains
RPN_04330	SSF51735	NAD(P)-binding Rossmann-fold domains
RPN_04340	SSF47413	lambda repressor-like DNA-binding domains
RPN_04345	SSF53098	Ribonuclease H-like
RPN_04350	SSF53649	Alkaline phosphatase-like
RPN_04360	SSF117892	Band 7/SPFH domain
RPN_04365	SSF52833	Thioredoxin-like
RPN_04370	SSF102405	MCP/YpsA-like
RPN_04380	SSF56712	Prokaryotic type I DNA topoisomerase
RPN_04380	SSF57783	Zinc beta-ribbon
RPN_04385	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
RPN_04385	SSF52374	Nucleotidylyl transferase
RPN_04415	SSF55387	Frataxin/Nqo15-like
RPN_04430	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPN_04450	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_04465	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_04470	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPN_04485	SSF54197	HIT-like
RPN_04490	SSF51735	NAD(P)-binding Rossmann-fold domains
RPN_04490	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPN_04495	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_04495	SSF90123	ABC transporter transmembrane region
RPN_04505	SSF103473	MFS general substrate transporter
RPN_04510	SSF109604	HD-domain/PDEase-like
RPN_04520	SSF74653	TolA/TonB C-terminal domain
RPN_04570	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_04575	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_04580	SSF52954	Class II aaRS ABD-related
RPN_04580	SSF55681	Class II aaRS and biotin synthetases
RPN_04595	SSF52402	Adenine nucleotide alpha hydrolases-like
RPN_04600	SSF53448	Nucleotide-diphospho-sugar transferases
RPN_04605	SSF110111	Ctag/Cox11
RPN_04610	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPN_04610	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPN_04615	SSF52964	TolB, N-terminal domain
RPN_04615	SSF69304	Tricorn protease N-terminal domain
RPN_04620	SSF69796	Thymidylate synthase-complementing protein Thy1
RPN_04630	SSF51261	Duplicated hybrid motif
RPN_04635	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
RPN_04640	SSF48334	DNA repair protein MutS, domain III
RPN_04640	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_04640	SSF53150	DNA repair protein MutS, domain II
RPN_04640	SSF55271	DNA repair protein MutS, domain I
RPN_04645	SSF56655	Carbohydrate phosphatase
RPN_04685	SSF53067	Actin-like ATPase domain
RPN_04690	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_04695	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_04710	SSF54427	NTF2-like
RPN_04720	SSF54427	NTF2-like
RPN_04750	SSF88723	PIN domain-like
RPN_04760	SSF50993	Peptidase/esterase 'gauge' domain
RPN_04760	SSF53474	alpha/beta-Hydrolases
RPN_04770	SSF103473	MFS general substrate transporter
RPN_04775	SSF109604	HD-domain/PDEase-like
RPN_04790	SSF48371	ARM repeat
RPN_04815	SSF47413	lambda repressor-like DNA-binding domains
RPN_04830	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_04830	SSF54980	EF-G C-terminal domain-like
RPN_04835	SSF75620	Release factor
RPN_04855	SSF49764	HSP20-like chaperones
RPN_04865	SSF46626	Cytochrome c
RPN_04865	SSF81496	Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
RPN_04875	SSF81342	Transmembrane di-heme cytochromes
RPN_04875	SSF81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
RPN_04880	SSF50022	ISP domain
RPN_04905	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPN_04910	SSF111384	OmpH-like
RPN_04930	SSF50447	Translation proteins
RPN_04930	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_04930	SSF54980	EF-G C-terminal domain-like
RPN_04935	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPN_04935	SSF52922	TK C-terminal domain-like
RPN_04940	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPN_04945	SSF56219	DNase I-like
RPN_04965	SSF55120	Pseudouridine synthase
RPN_04965	SSF55174	Alpha-L RNA-binding motif
RPN_04975	SSF50249	Nucleic acid-binding proteins
RPN_04980	SSF103473	MFS general substrate transporter
RPN_04985	SSF54211	Ribosomal protein S5 domain 2-like
RPN_04995	SSF46626	Cytochrome c
RPN_05005	SSF53067	Actin-like ATPase domain
RPN_05015	SSF52440	PreATP-grasp domain
RPN_05015	SSF56059	Glutathione synthetase ATP-binding domain-like
RPN_05020	SSF56176	FAD-binding/transporter-associated domain-like
RPN_05020	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
RPN_05025	SSF51984	MurCD N-terminal domain
RPN_05025	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPN_05025	SSF53623	MurD-like peptide ligases, catalytic domain
RPN_05030	SSF141868	EAL domain-like
RPN_05035	SSF82657	BolA-like
RPN_05055	SSF111369	HlyD-like secretion proteins
RPN_05075	SSF56655	Carbohydrate phosphatase
RPN_05080	SSF50104	Translation proteins SH3-like domain
RPN_05080	SSF50249	Nucleic acid-binding proteins
RPN_05085	SSF52172	CheY-like
RPN_05085	SSF55073	Nucleotide cyclase
RPN_05090	SSF55811	Nudix
RPN_05105	SSF55248	PCD-like
RPN_05110	SSF55166	Hedgehog/DD-peptidase
RPN_05115	SSF55166	Hedgehog/DD-peptidase
RPN_05120	SSF54211	Ribosomal protein S5 domain 2-like
RPN_05125	SSF52161	Ribosomal protein L13
RPN_05130	SSF50998	Quinoprotein alcohol dehydrogenase-like
RPN_05140	SSF48452	TPR-like
RPN_05145	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPN_05145	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPN_05150	SSF50156	PDZ domain-like
RPN_05150	SSF52096	ClpP/crotonase
RPN_05155	SSF54211	Ribosomal protein S5 domain 2-like
RPN_05155	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPN_05155	SSF56719	Type II DNA topoisomerase
RPN_05160	SSF48403	Ankyrin repeat
RPN_05175	SSF56954	Outer membrane efflux proteins (OEP)
RPN_05215	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_05220	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_05225	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_05235	SSF52954	Class II aaRS ABD-related
RPN_05235	SSF55186	ThrRS/AlaRS common domain
RPN_05235	SSF55681	Class II aaRS and biotin synthetases
RPN_05235	SSF81271	TGS-like
RPN_05245	SSF56104	SAICAR synthase-like
RPN_05250	SSF63411	LuxS/MPP-like metallohydrolase
RPN_05255	SSF53448	Nucleotide-diphospho-sugar transferases
RPN_05260	SSF143011	RelE-like
RPN_05265	SSF143120	YefM-like
RPN_05285	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_05285	SSF90123	ABC transporter transmembrane region
RPN_05300	SSF48403	Ankyrin repeat
RPN_05305	SSF111337	QueA-like
RPN_05310	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_05325	SSF50486	FMT C-terminal domain-like
RPN_05325	SSF53328	Formyltransferase
RPN_05330	SSF56420	Peptide deformylase
RPN_05340	SSF140319	IscX-like
RPN_05355	SSF118215	Proton glutamate symport protein
RPN_05360	SSF118215	Proton glutamate symport protein
RPN_05370	SSF101904	GyrA/ParC C-terminal domain-like
RPN_05370	SSF56719	Type II DNA topoisomerase
RPN_05385	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_05385	SSF90123	ABC transporter transmembrane region
RPN_05400	SSF52833	Thioredoxin-like
RPN_05405	SSF46600	C-terminal UvrC-binding domain of UvrB
RPN_05405	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_05410	SSF53098	Ribonuclease H-like
RPN_05415	SSF46565	Chaperone J-domain
RPN_05415	SSF47144	HSC20 (HSCB), C-terminal oligomerisation domain
RPN_05420	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
RPN_05420	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
RPN_05420	SSF53067	Actin-like ATPase domain
RPN_05425	SSF54292	2Fe-2S ferredoxin-like
RPN_05435	SSF53850	Periplasmic binding protein-like II
RPN_05440	SSF52402	Adenine nucleotide alpha hydrolases-like
RPN_05510	SSF48452	TPR-like
RPN_05520	SSF51161	Trimeric LpxA-like enzymes
RPN_05535	SSF81452	Cytochrome c oxidase subunit III-like
RPN_05545	SSF47240	Ferritin-like
RPN_05550	SSF48019	post-AAA+ oligomerization domain-like
RPN_05550	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_05570	SSF50156	PDZ domain-like
RPN_05570	SSF50494	Trypsin-like serine proteases
RPN_05575	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
RPN_05575	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
RPN_05575	SSF53067	Actin-like ATPase domain
RPN_05580	SSF46565	Chaperone J-domain
RPN_05580	SSF49493	HSP40/DnaJ peptide-binding domain
RPN_05580	SSF57938	DnaJ/Hsp40 cysteine-rich domain
RPN_05585	SSF140376	ChaB-like
RPN_05590	SSF140376	ChaB-like
RPN_05595	SSF48452	TPR-like
RPN_05600	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_05605	SSF55486	Metalloproteases ("zincins"), catalytic domain
RPN_05610	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPN_05620	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
RPN_05620	SSF51230	Single hybrid motif
RPN_05620	SSF52777	CoA-dependent acyltransferases
RPN_05625	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RPN_05630	SSF54913	GlnB-like
RPN_05635	SSF118215	Proton glutamate symport protein
RPN_05655	SSF48403	Ankyrin repeat
RPN_05665	SSF102114	Radical SAM enzymes
RPN_05670	SSF50993	Peptidase/esterase 'gauge' domain
RPN_05685	SSF53474	alpha/beta-Hydrolases
RPN_05690	SSF47446	Signal peptide-binding domain
RPN_05690	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_05695	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_05700	SSF47729	IHF-like DNA-binding proteins
RPN_05705	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPN_05705	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPN_05705	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPN_05715	SSF75217	alpha/beta knot
RPN_05715	SSF88697	PUA domain-like
RPN_05725	SSF55961	Bet v1-like
RPN_05735	SSF53474	alpha/beta-Hydrolases
RPN_05740	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPN_05745	SSF48013	NusB-like
RPN_05750	SSF50156	PDZ domain-like
RPN_05775	SSF103473	MFS general substrate transporter
RPN_05785	SSF53633	Carbamate kinase-like
RPN_05790	SSF55194	Ribosome recycling factor, RRF
RPN_05800	SSF141000	Glu-tRNAGln amidotransferase C subunit
RPN_05805	SSF75304	Amidase signature (AS) enzymes
RPN_05810	SSF55931	Glutamine synthetase/guanido kinase
RPN_05810	SSF89095	GatB/YqeY motif
RPN_05815	SSF53850	Periplasmic binding protein-like II
RPN_05820	SSF50475	FMN-binding split barrel
RPN_05825	SSF51735	NAD(P)-binding Rossmann-fold domains
RPN_05825	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPN_05840	SSF50249	Nucleic acid-binding proteins
RPN_05840	SSF55261	GAD domain-like
RPN_05840	SSF55681	Class II aaRS and biotin synthetases
RPN_05850	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_05855	SSF52949	Macro domain-like
RPN_05855	SSF53187	Zn-dependent exopeptidases
RPN_05865	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
RPN_05870	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
RPN_05875	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
RPN_05875	SSF54736	ClpS-like
RPN_05880	SSF160369	Ribosomal protein L10-like
RPN_05885	SSF56808	Ribosomal protein L1
RPN_05890	SSF46906	Ribosomal protein L11, C-terminal domain
RPN_05890	SSF54747	Ribosomal L11/L12e N-terminal domain
RPN_05895	SSF50104	Translation proteins SH3-like domain
RPN_05895	SSF82679	N-utilization substance G protein NusG, N-terminal domain
RPN_05905	SSF50447	Translation proteins
RPN_05905	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_05905	SSF54211	Ribosomal protein S5 domain 2-like
RPN_05905	SSF54980	EF-G C-terminal domain-like
RPN_05910	SSF47973	Ribosomal protein S7
RPN_05915	SSF50249	Nucleic acid-binding proteins
RPN_05920	SSF161098	MetI-like
RPN_05925	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
RPN_05925	SSF51905	FAD/NAD(P)-binding domain
RPN_05925	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
RPN_05930	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
RPN_05940	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
RPN_05945	SSF52821	Rhodanese/Cell cycle control phosphatase
RPN_05950	SSF50156	PDZ domain-like
RPN_05950	SSF50494	Trypsin-like serine proteases
RPN_05955	SSF117892	Band 7/SPFH domain
RPN_05960	SSF117892	Band 7/SPFH domain
RPN_05965	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_05970	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPN_05980	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
RPN_05985	SSF75217	alpha/beta knot
RPN_05990	SSF53098	Ribonuclease H-like
RPN_05995	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_05995	SSF54814	Prokaryotic type KH domain (KH-domain type II)
RPN_06000	SSF54768	dsRNA-binding domain-like
RPN_06000	SSF69065	RNase III domain-like
RPN_06005	SSF51306	LexA/Signal peptidase
RPN_06010	SSF140490	Nqo1C-terminal domain-like
RPN_06010	SSF142019	Nqo1 FMN-binding domain-like
RPN_06010	SSF142984	Nqo1 middle domain-like
RPN_06015	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPN_06025	SSF50104	Translation proteins SH3-like domain
RPN_06030	SSF75217	alpha/beta knot
RPN_06090	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_06100	SSF53633	Carbamate kinase-like
RPN_06105	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_06110	SSF143800	L28p-like
RPN_06115	SSF143800	L28p-like
RPN_06150	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_06160	SSF50621	Alanine racemase C-terminal domain-like
RPN_06160	SSF51419	PLP-binding barrel
RPN_06170	SSF53271	PRTase-like
RPN_06175	SSF53271	PRTase-like
RPN_06190	SSF48452	TPR-like
RPN_06190	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPN_06195	SSF143120	YefM-like
RPN_06205	SSF53383	PLP-dependent transferases
RPN_06215	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPN_06230	SSF46934	UBA-like
RPN_06230	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
RPN_06235	SSF52313	Ribosomal protein S2
RPN_06240	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPN_06240	SSF52374	Nucleotidylyl transferase
RPN_06245	SSF103515	Autotransporter
RPN_06265	SSF103473	MFS general substrate transporter
RPN_06270	SSF103481	Multidrug resistance efflux transporter EmrE
RPN_06275	SSF56925	OMPA-like
RPN_06280	SSF52467	DHS-like NAD/FAD-binding domain
RPN_06290	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RPN_06295	SSF52172	CheY-like
RPN_06300	SSF54611	SecB-like
RPN_06305	SSF51283	dUTPase-like
RPN_06310	SSF56935	Porins
RPN_06325	SSF101904	GyrA/ParC C-terminal domain-like
RPN_06325	SSF56719	Type II DNA topoisomerase
RPN_06330	SSF110997	Sporulation related repeat
RPN_06335	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPN_06335	SSF52374	Nucleotidylyl transferase
RPN_06335	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
RPN_06340	SSF109604	HD-domain/PDEase-like
RPN_06345	SSF89360	HesB-like domain
RPN_06360	SSF51569	Aldolase
RPN_06370	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_06375	SSF109709	KorB DNA-binding domain-like
RPN_06375	SSF110849	ParB/Sulfiredoxin
RPN_06380	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_06385	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPN_06390	SSF51905	FAD/NAD(P)-binding domain
RPN_06395	SSF54919	Nucleoside diphosphate kinase, NDK
RPN_06400	SSF103473	MFS general substrate transporter
RPN_06405	SSF103473	MFS general substrate transporter
RPN_06410	SSF56420	Peptide deformylase
RPN_06425	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPN_06445	SSF50182	Sm-like ribonucleoproteins
RPN_06460	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPN_06470	SSF46548	alpha-helical ferredoxin
RPN_06470	SSF54292	2Fe-2S ferredoxin-like
RPN_06475	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPN_06480	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPN_06485	SSF140990	FtsH protease domain-like
RPN_06485	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_06490	SSF52402	Adenine nucleotide alpha hydrolases-like
RPN_06495	SSF55653	Ribosomal protein L9 C-domain
RPN_06495	SSF55658	L9 N-domain-like
RPN_06500	SSF46911	Ribosomal protein S18
RPN_06505	SSF54995	Ribosomal protein S6
RPN_06510	SSF46894	C-terminal effector domain of the bipartite response regulators
RPN_06520	SSF53067	Actin-like ATPase domain
RPN_06530	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_06530	SSF81923	Double Clp-N motif
RPN_06560	SSF51735	NAD(P)-binding Rossmann-fold domains
RPN_06565	SSF51735	NAD(P)-binding Rossmann-fold domains
RPN_06610	SSF103515	Autotransporter
RPN_06625	SSF143456	VC0467-like
RPN_06630	SSF52833	Thioredoxin-like
RPN_06665	SSF51717	Dihydropteroate synthetase-like
RPN_06665	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
RPN_06675	SSF53597	Dihydrofolate reductase-like
RPN_06680	SSF48613	Heme oxygenase-like
RPN_06685	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_06695	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPN_06700	SSF141259	CarD-like
RPN_06705	SSF52833	Thioredoxin-like
RPN_06715	SSF81336	F1F0 ATP synthase subunit A
RPN_06720	SSF81333	F1F0 ATP synthase subunit C
RPN_06735	SSF48452	TPR-like
RPN_06745	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_06760	SSF103515	Autotransporter
RPN_06780	SSF81301	Nucleotidyltransferase
RPN_06780	SSF81891	Poly A polymerase C-terminal region-like
RPN_06785	SSF53807	"Helical backbone" metal receptor
RPN_06790	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_06800	SSF88713	Glycoside hydrolase/deacetylase
RPN_06805	SSF51395	FMN-linked oxidoreductases
RPN_06830	SSF52151	FabD/lysophospholipase-like
RPN_06840	SSF51161	Trimeric LpxA-like enzymes
RPN_06845	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPN_06850	SSF51161	Trimeric LpxA-like enzymes
RPN_06855	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
RPN_06860	SSF51971	Nucleotide-binding domain
RPN_06860	SSF63380	Riboflavin synthase domain-like
RPN_06870	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_06875	SSF52833	Thioredoxin-like
RPN_06885	SSF51726	UROD/MetE-like
RPN_06890	SSF53800	Chelatase
RPN_06910	SSF102886	Coproporphyrinogen III oxidase
RPN_06915	SSF103473	MFS general substrate transporter
RPN_06920	SSF48452	TPR-like
RPN_06930	SSF51735	NAD(P)-binding Rossmann-fold domains
RPN_06935	SSF118116	DNA mismatch repair protein MutL
RPN_06935	SSF54211	Ribosomal protein S5 domain 2-like
RPN_06935	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPN_06940	SSF57829	Zn-binding ribosomal proteins
RPN_06945	SSF54565	Ribosomal protein S16
RPN_06950	SSF47090	PGBD-like
RPN_06950	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
RPN_06955	SSF55681	Class II aaRS and biotin synthetases
RPN_06995	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPN_07000	SSF116734	DNA methylase specificity domain
RPN_07005	SSF116734	DNA methylase specificity domain
RPN_07010	SSF53187	Zn-dependent exopeptidases
RPN_07010	SSF55031	Bacterial exopeptidase dimerisation domain
RPN_07020	SSF102400	DNA polymerase III chi subunit
RPN_07030	SSF143011	RelE-like
RPN_07040	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
RPN_07045	SSF56281	Metallo-hydrolase/oxidoreductase
RPN_07050	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_07055	SSF143120	YefM-like
RPN_07065	SSF56601	beta-lactamase/transpeptidase-like
RPN_07080	SSF56601	beta-lactamase/transpeptidase-like
RPN_07085	SSF50630	Acid proteases
RPN_07090	SSF82607	YbaB-like
RPN_07095	SSF48019	post-AAA+ oligomerization domain-like
RPN_07095	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_07100	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
RPN_07105	SSF51735	NAD(P)-binding Rossmann-fold domains
RPN_07105	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RPN_07115	SSF46557	GreA transcript cleavage protein, N-terminal domain
RPN_07115	SSF54534	FKBP-like
RPN_07125	SSF56731	DNA primase core
RPN_07125	SSF57783	Zinc beta-ribbon
RPN_07130	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPN_07130	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPN_07135	SSF55120	Pseudouridine synthase
RPN_07140	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
RPN_07140	SSF50447	Translation proteins
RPN_07140	SSF55186	ThrRS/AlaRS common domain
RPN_07140	SSF55681	Class II aaRS and biotin synthetases
RPN_07175	SSF143120	YefM-like
RPN_07180	SSF88723	PIN domain-like
RPN_07185	SSF55681	Class II aaRS and biotin synthetases
RPN_07190	SSF109604	HD-domain/PDEase-like
RPN_07195	SSF55821	YrdC/RibB
RPN_07200	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPN_07215	SSF55120	Pseudouridine synthase
RPN_07215	SSF55174	Alpha-L RNA-binding motif
RPN_07220	SSF52141	Uracil-DNA glycosylase-like
RPN_07230	SSF48256	Citrate synthase
RPN_07235	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_07235	SSF82051	Obg GTP-binding protein N-terminal domain
RPN_07240	SSF102735	Trigger factor ribosome-binding domain
RPN_07240	SSF109998	Triger factor/SurA peptide-binding domain-like
RPN_07240	SSF54534	FKBP-like
RPN_07255	SSF53383	PLP-dependent transferases
RPN_07260	SSF110942	HSP90 C-terminal domain
RPN_07260	SSF54211	Ribosomal protein S5 domain 2-like
RPN_07260	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPN_07265	SSF69786	YggU-like
RPN_07275	SSF53955	Lysozyme-like
RPN_07285	SSF53474	alpha/beta-Hydrolases
RPN_07290	SSF50249	Nucleic acid-binding proteins
RPN_07295	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_07325	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_07330	SSF49777	PEBP-like
RPN_07340	SSF160240	Cation efflux protein cytoplasmic domain-like
RPN_07340	SSF161111	Cation efflux protein transmembrane domain-like
RPN_07345	SSF53927	Cytidine deaminase-like
RPN_07355	SSF54862	4Fe-4S ferredoxins
RPN_07360	SSF56925	OMPA-like
RPN_07365	SSF56925	OMPA-like
RPN_07390	SSF55920	Creatinase/aminopeptidase
RPN_07400	SSF46785	"Winged helix" DNA-binding domain
RPN_07400	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPN_07420	SSF103515	Autotransporter