RPJ_00010	SSF52833	Thioredoxin-like
RPJ_00015	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_00025	SSF51971	Nucleotide-binding domain
RPJ_00025	SSF63380	Riboflavin synthase domain-like
RPJ_00030	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
RPJ_00035	SSF51161	Trimeric LpxA-like enzymes
RPJ_00040	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPJ_00045	SSF51161	Trimeric LpxA-like enzymes
RPJ_00055	SSF52151	FabD/lysophospholipase-like
RPJ_00080	SSF51395	FMN-linked oxidoreductases
RPJ_00085	SSF88713	Glycoside hydrolase/deacetylase
RPJ_00095	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_00100	SSF53807	"Helical backbone" metal receptor
RPJ_00105	SSF81301	Nucleotidyltransferase
RPJ_00105	SSF81891	Poly A polymerase C-terminal region-like
RPJ_00130	SSF103515	Autotransporter
RPJ_00145	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_00155	SSF48452	TPR-like
RPJ_00170	SSF81333	F1F0 ATP synthase subunit C
RPJ_00175	SSF81336	F1F0 ATP synthase subunit A
RPJ_00185	SSF52833	Thioredoxin-like
RPJ_00190	SSF141259	CarD-like
RPJ_00195	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPJ_00205	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_00210	SSF48613	Heme oxygenase-like
RPJ_00215	SSF53597	Dihydrofolate reductase-like
RPJ_00220	SSF51717	Dihydropteroate synthetase-like
RPJ_00225	SSF51717	Dihydropteroate synthetase-like
RPJ_00225	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
RPJ_00265	SSF52833	Thioredoxin-like
RPJ_00270	SSF143456	VC0467-like
RPJ_00290	SSF103515	Autotransporter
RPJ_00335	SSF51735	NAD(P)-binding Rossmann-fold domains
RPJ_00340	SSF51735	NAD(P)-binding Rossmann-fold domains
RPJ_00370	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_00370	SSF81923	Double Clp-N motif
RPJ_00380	SSF53067	Actin-like ATPase domain
RPJ_00390	SSF46894	C-terminal effector domain of the bipartite response regulators
RPJ_00395	SSF54995	Ribosomal protein S6
RPJ_00400	SSF46911	Ribosomal protein S18
RPJ_00405	SSF55653	Ribosomal protein L9 C-domain
RPJ_00405	SSF55658	L9 N-domain-like
RPJ_00410	SSF52402	Adenine nucleotide alpha hydrolases-like
RPJ_00415	SSF140990	FtsH protease domain-like
RPJ_00415	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_00420	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPJ_00425	SSF46548	alpha-helical ferredoxin
RPJ_00425	SSF54292	2Fe-2S ferredoxin-like
RPJ_00435	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPJ_00450	SSF50182	Sm-like ribonucleoproteins
RPJ_00470	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPJ_00485	SSF56420	Peptide deformylase
RPJ_00490	SSF103473	MFS general substrate transporter
RPJ_00495	SSF103473	MFS general substrate transporter
RPJ_00500	SSF54919	Nucleoside diphosphate kinase, NDK
RPJ_00505	SSF51905	FAD/NAD(P)-binding domain
RPJ_00510	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPJ_00515	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_00520	SSF109709	KorB DNA-binding domain-like
RPJ_00520	SSF110849	ParB/Sulfiredoxin
RPJ_00525	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_00535	SSF51569	Aldolase
RPJ_00555	SSF89360	HesB-like domain
RPJ_00560	SSF109604	HD-domain/PDEase-like
RPJ_00565	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPJ_00565	SSF52374	Nucleotidylyl transferase
RPJ_00565	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
RPJ_00570	SSF110997	Sporulation related repeat
RPJ_00575	SSF101904	GyrA/ParC C-terminal domain-like
RPJ_00575	SSF56719	Type II DNA topoisomerase
RPJ_00585	SSF56935	Porins
RPJ_00590	SSF51283	dUTPase-like
RPJ_00595	SSF54611	SecB-like
RPJ_00600	SSF52172	CheY-like
RPJ_00605	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RPJ_00615	SSF52467	DHS-like NAD/FAD-binding domain
RPJ_00620	SSF56925	OMPA-like
RPJ_00625	SSF103481	Multidrug resistance efflux transporter EmrE
RPJ_00630	SSF103473	MFS general substrate transporter
RPJ_00650	SSF103515	Autotransporter
RPJ_00655	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPJ_00655	SSF52374	Nucleotidylyl transferase
RPJ_00660	SSF52313	Ribosomal protein S2
RPJ_00665	SSF46934	UBA-like
RPJ_00665	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
RPJ_00680	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPJ_00690	SSF53383	PLP-dependent transferases
RPJ_00695	SSF143120	YefM-like
RPJ_00700	SSF48452	TPR-like
RPJ_00700	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPJ_00715	SSF53271	PRTase-like
RPJ_00720	SSF53271	PRTase-like
RPJ_00730	SSF50621	Alanine racemase C-terminal domain-like
RPJ_00730	SSF51419	PLP-binding barrel
RPJ_00740	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_00775	SSF143800	L28p-like
RPJ_00780	SSF143800	L28p-like
RPJ_00785	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_00790	SSF53633	Carbamate kinase-like
RPJ_00800	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_00860	SSF75217	alpha/beta knot
RPJ_00865	SSF50104	Translation proteins SH3-like domain
RPJ_00875	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPJ_00880	SSF140490	Nqo1C-terminal domain-like
RPJ_00880	SSF142019	Nqo1 FMN-binding domain-like
RPJ_00880	SSF142984	Nqo1 middle domain-like
RPJ_00885	SSF51306	LexA/Signal peptidase
RPJ_00890	SSF54768	dsRNA-binding domain-like
RPJ_00890	SSF69065	RNase III domain-like
RPJ_00895	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_00895	SSF54814	Prokaryotic type KH domain (KH-domain type II)
RPJ_00900	SSF53098	Ribonuclease H-like
RPJ_00905	SSF75217	alpha/beta knot
RPJ_00910	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
RPJ_00920	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPJ_00925	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_00930	SSF117892	Band 7/SPFH domain
RPJ_00935	SSF117892	Band 7/SPFH domain
RPJ_00940	SSF50156	PDZ domain-like
RPJ_00940	SSF50494	Trypsin-like serine proteases
RPJ_00945	SSF52821	Rhodanese/Cell cycle control phosphatase
RPJ_00950	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
RPJ_00955	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
RPJ_00960	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
RPJ_00960	SSF51905	FAD/NAD(P)-binding domain
RPJ_00960	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
RPJ_00965	SSF161098	MetI-like
RPJ_00970	SSF50249	Nucleic acid-binding proteins
RPJ_00975	SSF47973	Ribosomal protein S7
RPJ_00980	SSF50447	Translation proteins
RPJ_00980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_00980	SSF54211	Ribosomal protein S5 domain 2-like
RPJ_00980	SSF54980	EF-G C-terminal domain-like
RPJ_00990	SSF50104	Translation proteins SH3-like domain
RPJ_00990	SSF82679	N-utilization substance G protein NusG, N-terminal domain
RPJ_00995	SSF46906	Ribosomal protein L11, C-terminal domain
RPJ_00995	SSF54747	Ribosomal L11/L12e N-terminal domain
RPJ_01000	SSF56808	Ribosomal protein L1
RPJ_01005	SSF160369	Ribosomal protein L10-like
RPJ_01010	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
RPJ_01010	SSF54736	ClpS-like
RPJ_01015	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
RPJ_01020	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
RPJ_01035	SSF52949	Macro domain-like
RPJ_01035	SSF53187	Zn-dependent exopeptidases
RPJ_01040	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_01050	SSF50249	Nucleic acid-binding proteins
RPJ_01050	SSF55261	GAD domain-like
RPJ_01050	SSF55681	Class II aaRS and biotin synthetases
RPJ_01065	SSF51735	NAD(P)-binding Rossmann-fold domains
RPJ_01065	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPJ_01070	SSF50475	FMN-binding split barrel
RPJ_01075	SSF53850	Periplasmic binding protein-like II
RPJ_01080	SSF55931	Glutamine synthetase/guanido kinase
RPJ_01080	SSF89095	GatB/YqeY motif
RPJ_01085	SSF75304	Amidase signature (AS) enzymes
RPJ_01090	SSF141000	Glu-tRNAGln amidotransferase C subunit
RPJ_01100	SSF55194	Ribosome recycling factor, RRF
RPJ_01105	SSF53633	Carbamate kinase-like
RPJ_01115	SSF103473	MFS general substrate transporter
RPJ_01140	SSF50156	PDZ domain-like
RPJ_01145	SSF48013	NusB-like
RPJ_01150	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPJ_01155	SSF53474	alpha/beta-Hydrolases
RPJ_01165	SSF55961	Bet v1-like
RPJ_01175	SSF75217	alpha/beta knot
RPJ_01175	SSF88697	PUA domain-like
RPJ_01185	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPJ_01185	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPJ_01185	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPJ_01190	SSF47729	IHF-like DNA-binding proteins
RPJ_01195	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_01200	SSF47446	Signal peptide-binding domain
RPJ_01200	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_01205	SSF53474	alpha/beta-Hydrolases
RPJ_01230	SSF102114	Radical SAM enzymes
RPJ_01240	SSF48403	Ankyrin repeat
RPJ_01260	SSF118215	Proton glutamate symport protein
RPJ_01265	SSF54913	GlnB-like
RPJ_01270	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RPJ_01275	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
RPJ_01275	SSF51230	Single hybrid motif
RPJ_01275	SSF52777	CoA-dependent acyltransferases
RPJ_01285	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPJ_01290	SSF55486	Metalloproteases ("zincins"), catalytic domain
RPJ_01295	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_01300	SSF48452	TPR-like
RPJ_01305	SSF140376	ChaB-like
RPJ_01310	SSF46565	Chaperone J-domain
RPJ_01310	SSF49493	HSP40/DnaJ peptide-binding domain
RPJ_01310	SSF57938	DnaJ/Hsp40 cysteine-rich domain
RPJ_01315	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
RPJ_01315	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
RPJ_01315	SSF53067	Actin-like ATPase domain
RPJ_01320	SSF50156	PDZ domain-like
RPJ_01320	SSF50494	Trypsin-like serine proteases
RPJ_01340	SSF48019	post-AAA+ oligomerization domain-like
RPJ_01340	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_01345	SSF47240	Ferritin-like
RPJ_01355	SSF81452	Cytochrome c oxidase subunit III-like
RPJ_01370	SSF51161	Trimeric LpxA-like enzymes
RPJ_01380	SSF48452	TPR-like
RPJ_01445	SSF52402	Adenine nucleotide alpha hydrolases-like
RPJ_01450	SSF53850	Periplasmic binding protein-like II
RPJ_01460	SSF54292	2Fe-2S ferredoxin-like
RPJ_01465	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
RPJ_01465	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
RPJ_01465	SSF53067	Actin-like ATPase domain
RPJ_01470	SSF46565	Chaperone J-domain
RPJ_01470	SSF47144	HSC20 (HSCB), C-terminal oligomerisation domain
RPJ_01475	SSF53098	Ribonuclease H-like
RPJ_01480	SSF46600	C-terminal UvrC-binding domain of UvrB
RPJ_01480	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_01485	SSF52833	Thioredoxin-like
RPJ_01500	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_01500	SSF90123	ABC transporter transmembrane region
RPJ_01515	SSF101904	GyrA/ParC C-terminal domain-like
RPJ_01515	SSF56719	Type II DNA topoisomerase
RPJ_01530	SSF118215	Proton glutamate symport protein
RPJ_01535	SSF118215	Proton glutamate symport protein
RPJ_01550	SSF140319	IscX-like
RPJ_01560	SSF56420	Peptide deformylase
RPJ_01565	SSF50486	FMT C-terminal domain-like
RPJ_01565	SSF53328	Formyltransferase
RPJ_01580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_01585	SSF111337	QueA-like
RPJ_01590	SSF48403	Ankyrin repeat
RPJ_01605	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_01605	SSF90123	ABC transporter transmembrane region
RPJ_01625	SSF143120	YefM-like
RPJ_01630	SSF143011	RelE-like
RPJ_01635	SSF53448	Nucleotide-diphospho-sugar transferases
RPJ_01640	SSF63411	LuxS/MPP-like metallohydrolase
RPJ_01645	SSF56104	SAICAR synthase-like
RPJ_01655	SSF52954	Class II aaRS ABD-related
RPJ_01655	SSF55186	ThrRS/AlaRS common domain
RPJ_01655	SSF55681	Class II aaRS and biotin synthetases
RPJ_01655	SSF81271	TGS-like
RPJ_01665	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_01670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_01675	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_01715	SSF56954	Outer membrane efflux proteins (OEP)
RPJ_01730	SSF48403	Ankyrin repeat
RPJ_01735	SSF54211	Ribosomal protein S5 domain 2-like
RPJ_01735	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPJ_01735	SSF56719	Type II DNA topoisomerase
RPJ_01740	SSF50156	PDZ domain-like
RPJ_01740	SSF52096	ClpP/crotonase
RPJ_01745	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPJ_01745	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPJ_01750	SSF48452	TPR-like
RPJ_01760	SSF50998	Quinoprotein alcohol dehydrogenase-like
RPJ_01765	SSF52161	Ribosomal protein L13
RPJ_01770	SSF54211	Ribosomal protein S5 domain 2-like
RPJ_01775	SSF55166	Hedgehog/DD-peptidase
RPJ_01780	SSF55166	Hedgehog/DD-peptidase
RPJ_01785	SSF55248	PCD-like
RPJ_01800	SSF55811	Nudix
RPJ_01805	SSF52172	CheY-like
RPJ_01805	SSF55073	Nucleotide cyclase
RPJ_01810	SSF50104	Translation proteins SH3-like domain
RPJ_01810	SSF50249	Nucleic acid-binding proteins
RPJ_01815	SSF56655	Carbohydrate phosphatase
RPJ_01835	SSF111369	HlyD-like secretion proteins
RPJ_01855	SSF82657	BolA-like
RPJ_01860	SSF141868	EAL domain-like
RPJ_01865	SSF51984	MurCD N-terminal domain
RPJ_01865	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPJ_01865	SSF53623	MurD-like peptide ligases, catalytic domain
RPJ_01870	SSF56176	FAD-binding/transporter-associated domain-like
RPJ_01870	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
RPJ_01875	SSF52440	PreATP-grasp domain
RPJ_01875	SSF56059	Glutathione synthetase ATP-binding domain-like
RPJ_01885	SSF53067	Actin-like ATPase domain
RPJ_01895	SSF46626	Cytochrome c
RPJ_01905	SSF54211	Ribosomal protein S5 domain 2-like
RPJ_01910	SSF103473	MFS general substrate transporter
RPJ_01915	SSF50249	Nucleic acid-binding proteins
RPJ_01925	SSF55120	Pseudouridine synthase
RPJ_01925	SSF55174	Alpha-L RNA-binding motif
RPJ_01945	SSF56219	DNase I-like
RPJ_01950	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPJ_01955	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPJ_01955	SSF52922	TK C-terminal domain-like
RPJ_01960	SSF50447	Translation proteins
RPJ_01960	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_01960	SSF54980	EF-G C-terminal domain-like
RPJ_01980	SSF111384	OmpH-like
RPJ_01985	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPJ_02010	SSF50022	ISP domain
RPJ_02015	SSF81342	Transmembrane di-heme cytochromes
RPJ_02015	SSF81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
RPJ_02025	SSF46626	Cytochrome c
RPJ_02025	SSF81496	Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
RPJ_02035	SSF49764	HSP20-like chaperones
RPJ_02055	SSF75620	Release factor
RPJ_02060	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_02060	SSF54980	EF-G C-terminal domain-like
RPJ_02075	SSF47413	lambda repressor-like DNA-binding domains
RPJ_02100	SSF48371	ARM repeat
RPJ_02115	SSF109604	HD-domain/PDEase-like
RPJ_02120	SSF103473	MFS general substrate transporter
RPJ_02130	SSF50993	Peptidase/esterase 'gauge' domain
RPJ_02130	SSF53474	alpha/beta-Hydrolases
RPJ_02140	SSF88723	PIN domain-like
RPJ_02170	SSF54427	NTF2-like
RPJ_02180	SSF54427	NTF2-like
RPJ_02195	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_02200	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_02205	SSF53067	Actin-like ATPase domain
RPJ_02245	SSF56655	Carbohydrate phosphatase
RPJ_02250	SSF48334	DNA repair protein MutS, domain III
RPJ_02250	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_02250	SSF53150	DNA repair protein MutS, domain II
RPJ_02250	SSF55271	DNA repair protein MutS, domain I
RPJ_02255	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
RPJ_02260	SSF51261	Duplicated hybrid motif
RPJ_02270	SSF69796	Thymidylate synthase-complementing protein Thy1
RPJ_02275	SSF52964	TolB, N-terminal domain
RPJ_02275	SSF69304	Tricorn protease N-terminal domain
RPJ_02280	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPJ_02280	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPJ_02285	SSF110111	Ctag/Cox11
RPJ_02290	SSF53448	Nucleotide-diphospho-sugar transferases
RPJ_02295	SSF52402	Adenine nucleotide alpha hydrolases-like
RPJ_02310	SSF52954	Class II aaRS ABD-related
RPJ_02310	SSF55681	Class II aaRS and biotin synthetases
RPJ_02315	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_02320	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_02370	SSF74653	TolA/TonB C-terminal domain
RPJ_02380	SSF109604	HD-domain/PDEase-like
RPJ_02385	SSF103473	MFS general substrate transporter
RPJ_02395	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_02395	SSF90123	ABC transporter transmembrane region
RPJ_02400	SSF51735	NAD(P)-binding Rossmann-fold domains
RPJ_02400	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPJ_02405	SSF54197	HIT-like
RPJ_02420	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPJ_02425	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_02440	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_02460	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPJ_02475	SSF55387	Frataxin/Nqo15-like
RPJ_02505	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
RPJ_02505	SSF52374	Nucleotidylyl transferase
RPJ_02510	SSF56712	Prokaryotic type I DNA topoisomerase
RPJ_02510	SSF57783	Zinc beta-ribbon
RPJ_02520	SSF102405	MCP/YpsA-like
RPJ_02525	SSF52833	Thioredoxin-like
RPJ_02530	SSF117892	Band 7/SPFH domain
RPJ_02540	SSF53649	Alkaline phosphatase-like
RPJ_02545	SSF53098	Ribonuclease H-like
RPJ_02550	SSF47413	lambda repressor-like DNA-binding domains
RPJ_02560	SSF51735	NAD(P)-binding Rossmann-fold domains
RPJ_02565	SSF51735	NAD(P)-binding Rossmann-fold domains
RPJ_02570	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPJ_02575	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPJ_02580	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPJ_02585	SSF53448	Nucleotide-diphospho-sugar transferases
RPJ_02590	SSF111369	HlyD-like secretion proteins
RPJ_02600	SSF53474	alpha/beta-Hydrolases
RPJ_02605	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPJ_02620	SSF55174	Alpha-L RNA-binding motif
RPJ_02640	SSF48439	Protein prenylyltransferase
RPJ_02650	SSF50346	PRC-barrel domain
RPJ_02650	SSF50447	Translation proteins
RPJ_02660	SSF116842	XseB-like
RPJ_02685	SSF50486	FMT C-terminal domain-like
RPJ_02690	SSF54909	Dimeric alpha+beta barrel
RPJ_02705	SSF52833	Thioredoxin-like
RPJ_02710	SSF56762	HydB/Nqo4-like
RPJ_02715	SSF143243	Nqo5-like
RPJ_02720	SSF56770	HydA/Nqo6-like
RPJ_02750	SSF56349	DNA breaking-rejoining enzymes
RPJ_02765	SSF51735	NAD(P)-binding Rossmann-fold domains
RPJ_02770	SSF56317	Carbon-nitrogen hydrolase
RPJ_02780	SSF47090	PGBD-like
RPJ_02780	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
RPJ_02785	SSF53822	Periplasmic binding protein-like I
RPJ_02795	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_02805	SSF48403	Ankyrin repeat
RPJ_02825	SSF158442	DsbB-like
RPJ_02830	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
RPJ_02830	SSF52374	Nucleotidylyl transferase
RPJ_02840	SSF51735	NAD(P)-binding Rossmann-fold domains
RPJ_02840	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RPJ_02840	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPJ_02855	SSF88723	PIN domain-like
RPJ_02860	SSF89447	AbrB/MazE/MraZ-like
RPJ_02865	SSF103473	MFS general substrate transporter
RPJ_02910	SSF51735	NAD(P)-binding Rossmann-fold domains
RPJ_02910	SSF56327	LDH C-terminal domain-like
RPJ_02935	SSF52317	Class I glutamine amidotransferase-like
RPJ_02935	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_02940	SSF53448	Nucleotide-diphospho-sugar transferases
RPJ_02955	SSF81442	Cytochrome c oxidase subunit I-like
RPJ_02960	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RPJ_02965	SSF52954	Class II aaRS ABD-related
RPJ_02965	SSF55681	Class II aaRS and biotin synthetases
RPJ_02970	SSF140931	Fic-like
RPJ_02980	SSF46929	DNA helicase RuvA subunit, C-terminal domain
RPJ_02980	SSF47781	RuvA domain 2-like
RPJ_02980	SSF50249	Nucleic acid-binding proteins
RPJ_02995	SSF46785	"Winged helix" DNA-binding domain
RPJ_02995	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_03000	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_03000	SSF90123	ABC transporter transmembrane region
RPJ_03005	SSF103473	MFS general substrate transporter
RPJ_03010	SSF56601	beta-lactamase/transpeptidase-like
RPJ_03015	SSF50685	Barwin-like endoglucanases
RPJ_03035	SSF49503	Cupredoxins
RPJ_03040	SSF54534	FKBP-like
RPJ_03045	SSF49482	Aromatic compound dioxygenase
RPJ_03050	SSF52833	Thioredoxin-like
RPJ_03055	SSF52096	ClpP/crotonase
RPJ_03060	SSF51283	dUTPase-like
RPJ_03065	SSF48435	Bacterial muramidases
RPJ_03065	SSF53955	Lysozyme-like
RPJ_03075	SSF141986	LD-carboxypeptidase A C-terminal domain-like
RPJ_03075	SSF52317	Class I glutamine amidotransferase-like
RPJ_03080	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_03080	SSF52980	Restriction endonuclease-like
RPJ_03090	SSF52317	Class I glutamine amidotransferase-like
RPJ_03095	SSF81442	Cytochrome c oxidase subunit I-like
RPJ_03100	SSF51161	Trimeric LpxA-like enzymes
RPJ_03105	SSF49503	Cupredoxins
RPJ_03105	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
RPJ_03110	SSF51261	Duplicated hybrid motif
RPJ_03125	SSF51984	MurCD N-terminal domain
RPJ_03125	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPJ_03125	SSF53623	MurD-like peptide ligases, catalytic domain
RPJ_03135	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPJ_03165	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPJ_03170	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPJ_03170	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPJ_03175	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPJ_03180	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPJ_03185	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPJ_03215	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPJ_03235	SSF54506	Diaminopimelate epimerase-like
RPJ_03240	SSF102114	Radical SAM enzymes
RPJ_03245	SSF46589	tRNA-binding arm
RPJ_03245	SSF55681	Class II aaRS and biotin synthetases
RPJ_03250	SSF46955	Putative DNA-binding domain
RPJ_03250	SSF50249	Nucleic acid-binding proteins
RPJ_03250	SSF54991	Anticodon-binding domain of PheRS
RPJ_03250	SSF55681	Class II aaRS and biotin synthetases
RPJ_03250	SSF56037	PheT/TilS domain
RPJ_03255	SSF55979	DNA clamp
RPJ_03275	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPJ_03275	SSF50677	ValRS/IleRS/LeuRS editing domain
RPJ_03275	SSF52374	Nucleotidylyl transferase
RPJ_03280	SSF53098	Ribonuclease H-like
RPJ_03295	SSF64005	Undecaprenyl diphosphate synthase
RPJ_03300	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPJ_03300	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPJ_03305	SSF46894	C-terminal effector domain of the bipartite response regulators
RPJ_03305	SSF52172	CheY-like
RPJ_03310	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
RPJ_03315	SSF51569	Aldolase
RPJ_03320	SSF74982	Small protein B (SmpB)
RPJ_03325	SSF52833	Thioredoxin-like
RPJ_03330	SSF51735	NAD(P)-binding Rossmann-fold domains
RPJ_03330	SSF52210	Succinyl-CoA synthetase domains
RPJ_03335	SSF52210	Succinyl-CoA synthetase domains
RPJ_03335	SSF56059	Glutathione synthetase ATP-binding domain-like
RPJ_03350	SSF89447	AbrB/MazE/MraZ-like
RPJ_03360	SSF81342	Transmembrane di-heme cytochromes
RPJ_03365	SSF53474	alpha/beta-Hydrolases
RPJ_03365	SSF82171	DPP6 N-terminal domain-like
RPJ_03370	SSF54427	NTF2-like
RPJ_03385	SSF89919	Ribosome-binding factor A, RbfA
RPJ_03400	SSF111304	Recombination protein RecR
RPJ_03430	SSF111331	NAD kinase/diacylglycerol kinase-like
RPJ_03435	SSF56281	Metallo-hydrolase/oxidoreductase
RPJ_03440	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPJ_03440	SSF51735	NAD(P)-binding Rossmann-fold domains
RPJ_03450	SSF53474	alpha/beta-Hydrolases
RPJ_03455	SSF51905	FAD/NAD(P)-binding domain
RPJ_03475	SSF53720	ALDH-like
RPJ_03490	SSF53448	Nucleotide-diphospho-sugar transferases
RPJ_03495	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_03520	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPJ_03525	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_03525	SSF54211	Ribosomal protein S5 domain 2-like
RPJ_03525	SSF88697	PUA domain-like
RPJ_03565	SSF69754	Ribosome binding protein Y (YfiA homologue)
RPJ_03580	SSF51735	NAD(P)-binding Rossmann-fold domains
RPJ_03580	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RPJ_03585	SSF51905	FAD/NAD(P)-binding domain
RPJ_03595	SSF49354	PapD-like
RPJ_03645	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
RPJ_03645	SSF51998	PFL-like glycyl radical enzymes
RPJ_03655	SSF47240	Ferritin-like
RPJ_03660	SSF141571	Pentapeptide repeat-like
RPJ_03680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_03690	SSF53738	Phosphoglucomutase, first 3 domains
RPJ_03690	SSF55957	Phosphoglucomutase, C-terminal domain
RPJ_03695	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_03710	SSF53697	SIS domain
RPJ_03715	SSF46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
RPJ_03715	SSF50249	Nucleic acid-binding proteins
RPJ_03715	SSF54211	Ribosomal protein S5 domain 2-like
RPJ_03715	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
RPJ_03715	SSF55666	Ribonuclease PH domain 2-like
RPJ_03720	SSF47060	S15/NS1 RNA-binding domain
RPJ_03725	SSF55120	Pseudouridine synthase
RPJ_03740	SSF47413	lambda repressor-like DNA-binding domains
RPJ_03750	SSF55931	Glutamine synthetase/guanido kinase
RPJ_03755	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
RPJ_03760	SSF56420	Peptide deformylase
RPJ_03770	SSF88723	PIN domain-like
RPJ_03790	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPJ_03790	SSF52009	Phosphohistidine domain
RPJ_03790	SSF56059	Glutathione synthetase ATP-binding domain-like
RPJ_03795	SSF47616	GST C-terminal domain-like
RPJ_03795	SSF52833	Thioredoxin-like
RPJ_03800	SSF52317	Class I glutamine amidotransferase-like
RPJ_03810	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPJ_03810	SSF53623	MurD-like peptide ligases, catalytic domain
RPJ_03815	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
RPJ_03815	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
RPJ_03840	SSF55681	Class II aaRS and biotin synthetases
RPJ_03870	SSF54364	Translation initiation factor IF3, N-terminal domain
RPJ_03870	SSF55200	Translation initiation factor IF3, C-terminal domain
RPJ_03875	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
RPJ_03875	SSF51230	Single hybrid motif
RPJ_03875	SSF52777	CoA-dependent acyltransferases
RPJ_03880	SSF75620	Release factor
RPJ_03885	SSF64182	DHH phosphoesterases
RPJ_03890	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPJ_03895	SSF50249	Nucleic acid-binding proteins
RPJ_03895	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_03895	SSF68912	Rho N-terminal domain-like
RPJ_03900	SSF52096	ClpP/crotonase
RPJ_03905	SSF47729	IHF-like DNA-binding proteins
RPJ_03960	SSF52374	Nucleotidylyl transferase
RPJ_03965	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
RPJ_03985	SSF53474	alpha/beta-Hydrolases
RPJ_03990	SSF81901	HCP-like
RPJ_04000	SSF69618	HemD-like
RPJ_04015	SSF103473	MFS general substrate transporter
RPJ_04040	SSF48576	Terpenoid synthases
RPJ_04045	SSF53092	Creatinase/prolidase N-terminal domain
RPJ_04045	SSF55920	Creatinase/aminopeptidase
RPJ_04055	SSF54106	LysM domain
RPJ_04065	SSF89360	HesB-like domain
RPJ_04070	SSF82649	SufE/NifU
RPJ_04075	SSF53383	PLP-dependent transferases
RPJ_04080	SSF53383	PLP-dependent transferases
RPJ_04085	SSF46785	"Winged helix" DNA-binding domain
RPJ_04130	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPJ_04145	SSF51395	FMN-linked oxidoreductases
RPJ_04150	SSF52096	ClpP/crotonase
RPJ_04155	SSF50249	Nucleic acid-binding proteins
RPJ_04160	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_04165	SSF47413	lambda repressor-like DNA-binding domains
RPJ_04215	SSF53850	Periplasmic binding protein-like II
RPJ_04215	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
RPJ_04220	SSF141986	LD-carboxypeptidase A C-terminal domain-like
RPJ_04220	SSF52317	Class I glutamine amidotransferase-like
RPJ_04225	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPJ_04230	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPJ_04245	SSF48403	Ankyrin repeat
RPJ_04255	SSF103025	Folate-binding domain
RPJ_04265	SSF47819	HRDC-like
RPJ_04265	SSF53098	Ribonuclease H-like
RPJ_04275	SSF100950	NagB/RpiA/CoA transferase-like
RPJ_04280	SSF51905	FAD/NAD(P)-binding domain
RPJ_04280	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RPJ_04285	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPJ_04295	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPJ_04315	SSF53955	Lysozyme-like
RPJ_04335	SSF57840	Ribosomal protein L36
RPJ_04340	SSF75625	YebC-like
RPJ_04345	SSF53448	Nucleotide-diphospho-sugar transferases
RPJ_04365	SSF101386	all-alpha NTP pyrophosphatases
RPJ_04370	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPJ_04380	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_04420	SSF51569	Aldolase
RPJ_04440	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_04445	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
RPJ_04455	SSF48024	N-terminal domain of DnaB helicase
RPJ_04455	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_04480	SSF55120	Pseudouridine synthase
RPJ_04480	SSF55174	Alpha-L RNA-binding motif
RPJ_04485	SSF141571	Pentapeptide repeat-like
RPJ_04490	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPJ_04495	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_04495	SSF54211	Ribosomal protein S5 domain 2-like
RPJ_04505	SSF50249	Nucleic acid-binding proteins
RPJ_04505	SSF57863	ArfGap/RecO-like zinc finger
RPJ_04515	SSF53067	Actin-like ATPase domain
RPJ_04525	SSF50447	Translation proteins
RPJ_04525	SSF52156	Initiation factor IF2/eIF5b, domain 3
RPJ_04525	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_04530	SSF47794	Rad51 N-terminal domain-like
RPJ_04530	SSF50249	Nucleic acid-binding proteins
RPJ_04530	SSF54814	Prokaryotic type KH domain (KH-domain type II)
RPJ_04530	SSF69705	Transcription factor NusA, N-terminal domain
RPJ_04535	SSF74942	YhbC-like, C-terminal domain
RPJ_04535	SSF75420	YhbC-like, N-terminal domain
RPJ_04550	SSF46785	"Winged helix" DNA-binding domain
RPJ_04555	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPJ_04555	SSF55174	Alpha-L RNA-binding motif
RPJ_04560	SSF52374	Nucleotidylyl transferase
RPJ_04560	SSF55174	Alpha-L RNA-binding motif
RPJ_04690	SSF51735	NAD(P)-binding Rossmann-fold domains
RPJ_04725	SSF51905	FAD/NAD(P)-binding domain
RPJ_04735	SSF46689	Homeodomain-like
RPJ_04735	SSF52172	CheY-like
RPJ_04735	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_04740	SSF141571	Pentapeptide repeat-like
RPJ_04750	SSF56519	Penicillin binding protein dimerisation domain
RPJ_04750	SSF56601	beta-lactamase/transpeptidase-like
RPJ_04760	SSF56519	Penicillin binding protein dimerisation domain
RPJ_04760	SSF56601	beta-lactamase/transpeptidase-like
RPJ_04770	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPJ_04770	SSF81799	Putative methyltransferase TM0872, insert domain
RPJ_04775	SSF89447	AbrB/MazE/MraZ-like
RPJ_04790	SSF46600	C-terminal UvrC-binding domain of UvrB
RPJ_04790	SSF47781	RuvA domain 2-like
RPJ_04790	SSF82771	GIY-YIG endonuclease
RPJ_04795	SSF110087	DR1885-like metal-binding protein
RPJ_04800	SSF48371	ARM repeat
RPJ_04805	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
RPJ_04820	SSF57884	Ada DNA repair protein, N-terminal domain (N-Ada 10)
RPJ_04825	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
RPJ_04825	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
RPJ_04860	SSF48403	Ankyrin repeat
RPJ_04865	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_04865	SSF81767	Pre-protein crosslinking domain of SecA
RPJ_04865	SSF81886	Helical scaffold and wing domains of SecA
RPJ_04870	SSF54534	FKBP-like
RPJ_04875	SSF56214	4'-phosphopantetheinyl transferase
RPJ_04880	SSF63562	RPB6/omega subunit-like
RPJ_04885	SSF55205	EPT/RTPC-like
RPJ_04890	SSF54211	Ribosomal protein S5 domain 2-like
RPJ_04890	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPJ_04890	SSF56719	Type II DNA topoisomerase
RPJ_04895	SSF56784	HAD-like
RPJ_04900	SSF158791	MgtE N-terminal domain-like
RPJ_04900	SSF161093	MgtE membrane domain-like
RPJ_04900	SSF54631	CBS-domain pair
RPJ_04910	SSF109604	HD-domain/PDEase-like
RPJ_04920	SSF103473	MFS general substrate transporter
RPJ_04950	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPJ_04955	SSF52833	Thioredoxin-like
RPJ_04960	SSF82093	Heme chaperone CcmE
RPJ_04965	SSF50324	Inorganic pyrophosphatase
RPJ_04985	SSF50249	Nucleic acid-binding proteins
RPJ_04985	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_05005	SSF100950	NagB/RpiA/CoA transferase-like
RPJ_05010	SSF100950	NagB/RpiA/CoA transferase-like
RPJ_05015	SSF52218	Flavoproteins
RPJ_05020	SSF52218	Flavoproteins
RPJ_05035	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPJ_05035	SSF53623	MurD-like peptide ligases, catalytic domain
RPJ_05035	SSF63418	MurE/MurF N-terminal domain
RPJ_05040	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPJ_05040	SSF53623	MurD-like peptide ligases, catalytic domain
RPJ_05040	SSF63418	MurE/MurF N-terminal domain
RPJ_05045	SSF141259	CarD-like
RPJ_05045	SSF143517	TRCF domain-like
RPJ_05045	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_05050	SSF109910	YgfY-like
RPJ_05055	SSF52821	Rhodanese/Cell cycle control phosphatase
RPJ_05060	SSF48295	TrpR-like
RPJ_05060	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_05095	SSF52151	FabD/lysophospholipase-like
RPJ_05125	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_05125	SSF81271	TGS-like
RPJ_05130	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPJ_05140	SSF53178	Peptidyl-tRNA hydrolase-like
RPJ_05145	SSF50715	Ribosomal protein L25-like
RPJ_05150	SSF102114	Radical SAM enzymes
RPJ_05155	SSF143034	L35p-like
RPJ_05160	SSF74731	Ribosomal protein L20
RPJ_05170	SSF54211	Ribosomal protein S5 domain 2-like
RPJ_05175	SSF140860	Pseudo ankyrin repeat-like
RPJ_05195	SSF143865	CorA soluble domain-like
RPJ_05195	SSF144083	Magnesium transport protein CorA, transmembrane region
RPJ_05220	SSF158472	HAMP domain-like
RPJ_05220	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPJ_05220	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPJ_05250	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPJ_05250	SSF50677	ValRS/IleRS/LeuRS editing domain
RPJ_05250	SSF52374	Nucleotidylyl transferase
RPJ_05265	SSF48452	TPR-like
RPJ_05275	SSF51230	Single hybrid motif
RPJ_05275	SSF51246	Rudiment single hybrid motif
RPJ_05275	SSF52440	PreATP-grasp domain
RPJ_05275	SSF56059	Glutathione synthetase ATP-binding domain-like
RPJ_05280	SSF52096	ClpP/crotonase
RPJ_05290	SSF103473	MFS general substrate transporter
RPJ_05290	SSF56801	Acetyl-CoA synthetase-like
RPJ_05290	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
RPJ_05295	SSF159894	YgaC/TfoX-N like
RPJ_05300	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RPJ_05305	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPJ_05310	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
RPJ_05310	SSF52374	Nucleotidylyl transferase
RPJ_05325	SSF48592	GroEL equatorial domain-like
RPJ_05325	SSF52029	GroEL apical domain-like
RPJ_05325	SSF54849	GroEL-intermediate domain like
RPJ_05330	SSF50129	GroES-like
RPJ_05375	SSF54211	Ribosomal protein S5 domain 2-like
RPJ_05375	SSF55666	Ribonuclease PH domain 2-like
RPJ_05380	SSF51064	Head domain of nucleotide exchange factor GrpE
RPJ_05380	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
RPJ_05390	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_05425	SSF103473	MFS general substrate transporter
RPJ_05430	SSF109604	HD-domain/PDEase-like
RPJ_05435	SSF46992	Ribosomal protein S20
RPJ_05440	SSF64263	Prokaryotic ribosomal protein L17
RPJ_05445	SSF47789	C-terminal domain of RNA polymerase alpha subunit
RPJ_05445	SSF55257	RBP11-like subunits of RNA polymerase
RPJ_05445	SSF56553	Insert subdomain of RNA polymerase alpha subunit
RPJ_05450	SSF53137	Translational machinery components
RPJ_05455	SSF46946	S13-like H2TH domain
RPJ_05460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_05460	SSF57774	Microbial and mitochondrial ADK, insert "zinc finger" domain
RPJ_05465	SSF103491	Preprotein translocase SecY subunit
RPJ_05470	SSF52080	Ribosomal proteins L15p and L18e
RPJ_05475	SSF55129	Ribosomal protein L30p/L7e
RPJ_05480	SSF54211	Ribosomal protein S5 domain 2-like
RPJ_05480	SSF54768	dsRNA-binding domain-like
RPJ_05485	SSF53137	Translational machinery components
RPJ_05490	SSF56053	Ribosomal protein L6
RPJ_05495	SSF56047	Ribosomal protein S8
RPJ_05500	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RPJ_05505	SSF55282	RL5-like
RPJ_05510	SSF50104	Translation proteins SH3-like domain
RPJ_05515	SSF50193	Ribosomal protein L14
RPJ_05520	SSF50249	Nucleic acid-binding proteins
RPJ_05525	SSF46561	Ribosomal protein L29 (L29p)
RPJ_05530	SSF54686	Ribosomal protein L16p/L10e
RPJ_05535	SSF54814	Prokaryotic type KH domain (KH-domain type II)
RPJ_05535	SSF54821	Ribosomal protein S3 C-terminal domain
RPJ_05540	SSF54843	Ribosomal protein L22
RPJ_05545	SSF54570	Ribosomal protein S19
RPJ_05550	SSF50104	Translation proteins SH3-like domain
RPJ_05550	SSF50249	Nucleic acid-binding proteins
RPJ_05555	SSF54189	Ribosomal proteins S24e, L23 and L15e
RPJ_05560	SSF52166	Ribosomal protein L4
RPJ_05565	SSF50447	Translation proteins
RPJ_05570	SSF54999	Ribosomal protein S10
RPJ_05580	SSF50447	Translation proteins
RPJ_05580	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
RPJ_05580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_05585	SSF55315	L30e-like
RPJ_05585	SSF75217	alpha/beta knot
RPJ_05595	SSF48557	L-aspartase-like
RPJ_05600	SSF143120	YefM-like
RPJ_05605	SSF88723	PIN domain-like
RPJ_05610	SSF52490	Tubulin nucleotide-binding domain-like
RPJ_05610	SSF55307	Tubulin C-terminal domain-like
RPJ_05620	SSF49772	Ecotin, trypsin inhibitor
RPJ_05625	SSF110836	Hypothetical protein SAV1430
RPJ_05625	SSF117916	Fe-S cluster assembly (FSCA) domain-like
RPJ_05630	SSF103473	MFS general substrate transporter
RPJ_05635	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_05640	SSF50249	Nucleic acid-binding proteins
RPJ_05645	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPJ_05650	SSF109998	Triger factor/SurA peptide-binding domain-like
RPJ_05665	SSF53850	Periplasmic binding protein-like II
RPJ_05675	SSF56219	DNase I-like
RPJ_05685	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_05690	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_05725	SSF56112	Protein kinase-like (PK-like)
RPJ_05730	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPJ_05735	SSF46946	S13-like H2TH domain
RPJ_05735	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RPJ_05735	SSF81624	N-terminal domain of MutM-like DNA repair proteins
RPJ_05740	SSF53448	Nucleotide-diphospho-sugar transferases
RPJ_05800	SSF51556	Metallo-dependent hydrolases
RPJ_05805	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPJ_05805	SSF52374	Nucleotidylyl transferase
RPJ_05810	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_05815	SSF103473	MFS general substrate transporter
RPJ_05840	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPJ_05840	SSF50677	ValRS/IleRS/LeuRS editing domain
RPJ_05840	SSF52374	Nucleotidylyl transferase
RPJ_05930	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_05930	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RPJ_05935	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPJ_05940	SSF52402	Adenine nucleotide alpha hydrolases-like
RPJ_05945	SSF143100	TTHA1013/TTHA0281-like
RPJ_05945	SSF47598	Ribbon-helix-helix
RPJ_05950	SSF54786	YcfA/nrd intein domain
RPJ_05955	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_05955	SSF90123	ABC transporter transmembrane region
RPJ_05965	SSF103473	MFS general substrate transporter
RPJ_05975	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_05985	SSF54001	Cysteine proteinases
RPJ_05990	SSF54631	CBS-domain pair
RPJ_05990	SSF56176	FAD-binding/transporter-associated domain-like
RPJ_06040	SSF103515	Autotransporter
RPJ_06045	SSF81301	Nucleotidyltransferase
RPJ_06050	SSF51445	(Trans)glycosidases
RPJ_06055	SSF46955	Putative DNA-binding domain
RPJ_06060	SSF47729	IHF-like DNA-binding proteins
RPJ_06065	SSF47162	Apolipoprotein
RPJ_06070	SSF52833	Thioredoxin-like
RPJ_06080	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_06085	SSF51261	Duplicated hybrid motif
RPJ_06090	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPJ_06095	SSF47781	RuvA domain 2-like
RPJ_06095	SSF50249	Nucleic acid-binding proteins
RPJ_06095	SSF52113	BRCT domain
RPJ_06095	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
RPJ_06105	SSF51713	tRNA-guanine transglycosylase
RPJ_06110	SSF109604	HD-domain/PDEase-like
RPJ_06150	SSF53098	Ribonuclease H-like
RPJ_06155	SSF101738	SspB-like
RPJ_06165	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_06170	SSF53098	Ribonuclease H-like
RPJ_06180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_06195	SSF52151	FabD/lysophospholipase-like
RPJ_06195	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
RPJ_06265	SSF53474	alpha/beta-Hydrolases
RPJ_06275	SSF55811	Nudix
RPJ_06285	SSF54631	CBS-domain pair
RPJ_06285	SSF56176	FAD-binding/transporter-associated domain-like
RPJ_06290	SSF55486	Metalloproteases ("zincins"), catalytic domain
RPJ_06295	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
RPJ_06305	SSF102114	Radical SAM enzymes
RPJ_06310	SSF53383	PLP-dependent transferases
RPJ_06315	SSF53474	alpha/beta-Hydrolases
RPJ_06320	SSF52833	Thioredoxin-like
RPJ_06325	SSF48150	DNA-glycosylase
RPJ_06370	SSF53790	Tetrapyrrole methylase
RPJ_06375	SSF53822	Periplasmic binding protein-like I
RPJ_06385	SSF101307	YutG-like
RPJ_06390	SSF141091	L21p-like
RPJ_06395	SSF110324	Ribosomal L27 protein-like
RPJ_06400	SSF53633	Carbamate kinase-like
RPJ_06400	SSF55021	ACT-like
RPJ_06405	SSF47413	lambda repressor-like DNA-binding domains
RPJ_06415	SSF56281	Metallo-hydrolase/oxidoreductase
RPJ_06435	SSF103473	MFS general substrate transporter
RPJ_06440	SSF102829	Cell division protein ZapA-like
RPJ_06455	SSF51735	NAD(P)-binding Rossmann-fold domains
RPJ_06455	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RPJ_06460	SSF116878	TrmE connector domain
RPJ_06460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_06480	SSF103473	MFS general substrate transporter
RPJ_06485	SSF103473	MFS general substrate transporter
RPJ_06490	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_06490	SSF54752	RecA protein, C-terminal domain
RPJ_06495	SSF51735	NAD(P)-binding Rossmann-fold domains
RPJ_06500	SSF47336	ACP-like
RPJ_06505	SSF53901	Thiolase-like
RPJ_06510	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_06525	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_06530	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_06535	SSF47413	lambda repressor-like DNA-binding domains
RPJ_06545	SSF53067	Actin-like ATPase domain
RPJ_06555	SSF103088	OmpA-like
RPJ_06565	SSF53901	Thiolase-like
RPJ_06570	SSF57829	Zn-binding ribosomal proteins
RPJ_06580	SSF47364	Domain of the SRP/SRP receptor G-proteins
RPJ_06580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_06585	SSF47807	5' to 3' exonuclease, C-terminal subdomain
RPJ_06585	SSF53098	Ribonuclease H-like
RPJ_06585	SSF56672	DNA/RNA polymerases
RPJ_06585	SSF88723	PIN domain-like
RPJ_06600	SSF55973	S-adenosylmethionine synthetase
RPJ_06605	SSF55973	S-adenosylmethionine synthetase
RPJ_06610	SSF55973	S-adenosylmethionine synthetase
RPJ_06630	SSF89550	PHP domain-like
RPJ_06635	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPJ_06635	SSF51735	NAD(P)-binding Rossmann-fold domains
RPJ_06635	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
RPJ_06645	SSF103473	MFS general substrate transporter
RPJ_06655	SSF46589	tRNA-binding arm
RPJ_06655	SSF55681	Class II aaRS and biotin synthetases
RPJ_06665	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_06680	SSF56925	OMPA-like
RPJ_06685	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPJ_06695	SSF47413	lambda repressor-like DNA-binding domains
RPJ_06720	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_06725	SSF54862	4Fe-4S ferredoxins
RPJ_06735	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
RPJ_06735	SSF54292	2Fe-2S ferredoxin-like
RPJ_06735	SSF54862	4Fe-4S ferredoxins
RPJ_06745	SSF52016	LeuD/IlvD-like
RPJ_06745	SSF53732	Aconitase iron-sulfur domain
RPJ_06750	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
RPJ_06755	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
RPJ_06755	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
RPJ_06755	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_06760	SSF52943	ATP synthase (F1-ATPase), gamma subunit
RPJ_06765	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
RPJ_06765	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
RPJ_06765	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_06770	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
RPJ_06775	SSF51905	FAD/NAD(P)-binding domain
RPJ_06775	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RPJ_06780	SSF47240	Ferritin-like
RPJ_06800	SSF56601	beta-lactamase/transpeptidase-like
RPJ_06805	SSF56601	beta-lactamase/transpeptidase-like
RPJ_06810	SSF53955	Lysozyme-like
RPJ_06810	SSF56601	beta-lactamase/transpeptidase-like
RPJ_06815	SSF102114	Radical SAM enzymes
RPJ_06860	SSF51735	NAD(P)-binding Rossmann-fold domains
RPJ_06865	SSF81301	Nucleotidyltransferase
RPJ_06870	SSF82657	BolA-like
RPJ_06940	SSF50249	Nucleic acid-binding proteins
RPJ_06945	SSF52972	ITPase-like
RPJ_06950	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
RPJ_06950	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RPJ_06955	SSF56349	DNA breaking-rejoining enzymes
RPJ_06965	SSF56024	Phospholipase D/nuclease
RPJ_06980	SSF143968	UbiD C-terminal domain-like
RPJ_06980	SSF50475	FMN-binding split barrel
RPJ_06990	SSF103515	Autotransporter
RPJ_07010	SSF46785	"Winged helix" DNA-binding domain
RPJ_07010	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_07020	SSF55920	Creatinase/aminopeptidase
RPJ_07045	SSF56925	OMPA-like
RPJ_07050	SSF56925	OMPA-like
RPJ_07055	SSF54862	4Fe-4S ferredoxins
RPJ_07065	SSF53927	Cytidine deaminase-like
RPJ_07070	SSF160240	Cation efflux protein cytoplasmic domain-like
RPJ_07070	SSF161111	Cation efflux protein transmembrane domain-like
RPJ_07080	SSF49777	PEBP-like
RPJ_07085	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_07120	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_07125	SSF50249	Nucleic acid-binding proteins
RPJ_07130	SSF53474	alpha/beta-Hydrolases
RPJ_07140	SSF53955	Lysozyme-like
RPJ_07150	SSF69786	YggU-like
RPJ_07155	SSF110942	HSP90 C-terminal domain
RPJ_07155	SSF54211	Ribosomal protein S5 domain 2-like
RPJ_07155	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPJ_07160	SSF53383	PLP-dependent transferases
RPJ_07175	SSF102735	Trigger factor ribosome-binding domain
RPJ_07175	SSF109998	Triger factor/SurA peptide-binding domain-like
RPJ_07175	SSF54534	FKBP-like
RPJ_07180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_07180	SSF82051	Obg GTP-binding protein N-terminal domain
RPJ_07185	SSF48256	Citrate synthase
RPJ_07195	SSF52141	Uracil-DNA glycosylase-like
RPJ_07200	SSF55120	Pseudouridine synthase
RPJ_07200	SSF55174	Alpha-L RNA-binding motif
RPJ_07215	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPJ_07220	SSF55821	YrdC/RibB
RPJ_07225	SSF109604	HD-domain/PDEase-like
RPJ_07230	SSF55681	Class II aaRS and biotin synthetases
RPJ_07235	SSF88723	PIN domain-like
RPJ_07240	SSF143120	YefM-like
RPJ_07275	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
RPJ_07275	SSF50447	Translation proteins
RPJ_07275	SSF55186	ThrRS/AlaRS common domain
RPJ_07275	SSF55681	Class II aaRS and biotin synthetases
RPJ_07280	SSF55120	Pseudouridine synthase
RPJ_07285	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPJ_07285	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPJ_07290	SSF56731	DNA primase core
RPJ_07290	SSF57783	Zinc beta-ribbon
RPJ_07300	SSF46557	GreA transcript cleavage protein, N-terminal domain
RPJ_07300	SSF54534	FKBP-like
RPJ_07310	SSF51735	NAD(P)-binding Rossmann-fold domains
RPJ_07310	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RPJ_07315	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
RPJ_07320	SSF48019	post-AAA+ oligomerization domain-like
RPJ_07320	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_07325	SSF82607	YbaB-like
RPJ_07340	SSF50630	Acid proteases
RPJ_07345	SSF56601	beta-lactamase/transpeptidase-like
RPJ_07360	SSF56601	beta-lactamase/transpeptidase-like
RPJ_07370	SSF143120	YefM-like
RPJ_07375	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPJ_07380	SSF56281	Metallo-hydrolase/oxidoreductase
RPJ_07385	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
RPJ_07395	SSF143011	RelE-like
RPJ_07405	SSF102400	DNA polymerase III chi subunit
RPJ_07415	SSF53187	Zn-dependent exopeptidases
RPJ_07415	SSF55031	Bacterial exopeptidase dimerisation domain
RPJ_07420	SSF116734	DNA methylase specificity domain
RPJ_07425	SSF116734	DNA methylase specificity domain
RPJ_07430	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPJ_07465	SSF55681	Class II aaRS and biotin synthetases
RPJ_07470	SSF47090	PGBD-like
RPJ_07470	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
RPJ_07475	SSF54565	Ribosomal protein S16
RPJ_07480	SSF57829	Zn-binding ribosomal proteins
RPJ_07485	SSF118116	DNA mismatch repair protein MutL
RPJ_07485	SSF54211	Ribosomal protein S5 domain 2-like
RPJ_07485	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPJ_07495	SSF51735	NAD(P)-binding Rossmann-fold domains
RPJ_07505	SSF48452	TPR-like
RPJ_07510	SSF103473	MFS general substrate transporter
RPJ_07515	SSF102886	Coproporphyrinogen III oxidase
RPJ_07535	SSF53800	Chelatase
RPJ_07540	SSF51726	UROD/MetE-like