RPK_00010	SSF52833	Thioredoxin-like
RPK_00015	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_00025	SSF51971	Nucleotide-binding domain
RPK_00025	SSF63380	Riboflavin synthase domain-like
RPK_00030	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
RPK_00035	SSF51161	Trimeric LpxA-like enzymes
RPK_00040	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPK_00045	SSF51161	Trimeric LpxA-like enzymes
RPK_00055	SSF52151	FabD/lysophospholipase-like
RPK_00075	SSF51395	FMN-linked oxidoreductases
RPK_00080	SSF88713	Glycoside hydrolase/deacetylase
RPK_00090	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_00095	SSF53807	"Helical backbone" metal receptor
RPK_00100	SSF81301	Nucleotidyltransferase
RPK_00100	SSF81891	Poly A polymerase C-terminal region-like
RPK_00120	SSF103515	Autotransporter
RPK_00135	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_00145	SSF48452	TPR-like
RPK_00160	SSF81333	F1F0 ATP synthase subunit C
RPK_00165	SSF81336	F1F0 ATP synthase subunit A
RPK_00175	SSF52833	Thioredoxin-like
RPK_00180	SSF141259	CarD-like
RPK_00185	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPK_00195	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_00200	SSF48613	Heme oxygenase-like
RPK_00210	SSF53597	Dihydrofolate reductase-like
RPK_00255	SSF52833	Thioredoxin-like
RPK_00260	SSF143456	VC0467-like
RPK_00275	SSF103515	Autotransporter
RPK_00315	SSF51735	NAD(P)-binding Rossmann-fold domains
RPK_00320	SSF51735	NAD(P)-binding Rossmann-fold domains
RPK_00335	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_00335	SSF81923	Double Clp-N motif
RPK_00345	SSF53067	Actin-like ATPase domain
RPK_00355	SSF46894	C-terminal effector domain of the bipartite response regulators
RPK_00365	SSF54995	Ribosomal protein S6
RPK_00370	SSF46911	Ribosomal protein S18
RPK_00375	SSF55653	Ribosomal protein L9 C-domain
RPK_00375	SSF55658	L9 N-domain-like
RPK_00380	SSF52402	Adenine nucleotide alpha hydrolases-like
RPK_00385	SSF140990	FtsH protease domain-like
RPK_00385	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_00390	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPK_00395	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPK_00400	SSF46548	alpha-helical ferredoxin
RPK_00400	SSF54292	2Fe-2S ferredoxin-like
RPK_00410	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPK_00425	SSF50182	Sm-like ribonucleoproteins
RPK_00445	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPK_00460	SSF56420	Peptide deformylase
RPK_00465	SSF103473	MFS general substrate transporter
RPK_00470	SSF103473	MFS general substrate transporter
RPK_00475	SSF54919	Nucleoside diphosphate kinase, NDK
RPK_00480	SSF51905	FAD/NAD(P)-binding domain
RPK_00485	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPK_00490	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_00495	SSF109709	KorB DNA-binding domain-like
RPK_00495	SSF110849	ParB/Sulfiredoxin
RPK_00500	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_00510	SSF51569	Aldolase
RPK_00525	SSF89360	HesB-like domain
RPK_00530	SSF109604	HD-domain/PDEase-like
RPK_00535	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPK_00535	SSF52374	Nucleotidylyl transferase
RPK_00535	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
RPK_00540	SSF110997	Sporulation related repeat
RPK_00545	SSF101904	GyrA/ParC C-terminal domain-like
RPK_00545	SSF56719	Type II DNA topoisomerase
RPK_00555	SSF56935	Porins
RPK_00560	SSF51283	dUTPase-like
RPK_00565	SSF54611	SecB-like
RPK_00570	SSF52172	CheY-like
RPK_00575	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RPK_00585	SSF52467	DHS-like NAD/FAD-binding domain
RPK_00590	SSF56925	OMPA-like
RPK_00595	SSF103481	Multidrug resistance efflux transporter EmrE
RPK_00600	SSF103473	MFS general substrate transporter
RPK_00620	SSF103515	Autotransporter
RPK_00625	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPK_00625	SSF52374	Nucleotidylyl transferase
RPK_00630	SSF52313	Ribosomal protein S2
RPK_00635	SSF46934	UBA-like
RPK_00635	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
RPK_00650	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPK_00660	SSF53383	PLP-dependent transferases
RPK_00670	SSF143120	YefM-like
RPK_00675	SSF48452	TPR-like
RPK_00675	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPK_00690	SSF53271	PRTase-like
RPK_00695	SSF53271	PRTase-like
RPK_00705	SSF50621	Alanine racemase C-terminal domain-like
RPK_00705	SSF51419	PLP-binding barrel
RPK_00715	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_00750	SSF143800	L28p-like
RPK_00755	SSF143800	L28p-like
RPK_00760	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_00765	SSF53633	Carbamate kinase-like
RPK_00775	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_00835	SSF75217	alpha/beta knot
RPK_00840	SSF50104	Translation proteins SH3-like domain
RPK_00850	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPK_00855	SSF140490	Nqo1C-terminal domain-like
RPK_00855	SSF142019	Nqo1 FMN-binding domain-like
RPK_00855	SSF142984	Nqo1 middle domain-like
RPK_00860	SSF51306	LexA/Signal peptidase
RPK_00865	SSF54768	dsRNA-binding domain-like
RPK_00865	SSF69065	RNase III domain-like
RPK_00870	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_00870	SSF54814	Prokaryotic type KH domain (KH-domain type II)
RPK_00875	SSF53098	Ribonuclease H-like
RPK_00880	SSF75217	alpha/beta knot
RPK_00885	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
RPK_00900	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPK_00905	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_00910	SSF117892	Band 7/SPFH domain
RPK_00915	SSF117892	Band 7/SPFH domain
RPK_00920	SSF50156	PDZ domain-like
RPK_00920	SSF50494	Trypsin-like serine proteases
RPK_00925	SSF52821	Rhodanese/Cell cycle control phosphatase
RPK_00930	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
RPK_00935	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
RPK_00940	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
RPK_00940	SSF51905	FAD/NAD(P)-binding domain
RPK_00940	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
RPK_00945	SSF161098	MetI-like
RPK_00950	SSF50249	Nucleic acid-binding proteins
RPK_00955	SSF47973	Ribosomal protein S7
RPK_00960	SSF50447	Translation proteins
RPK_00960	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_00960	SSF54211	Ribosomal protein S5 domain 2-like
RPK_00960	SSF54980	EF-G C-terminal domain-like
RPK_00970	SSF50104	Translation proteins SH3-like domain
RPK_00970	SSF82679	N-utilization substance G protein NusG, N-terminal domain
RPK_00975	SSF46906	Ribosomal protein L11, C-terminal domain
RPK_00975	SSF54747	Ribosomal L11/L12e N-terminal domain
RPK_00980	SSF56808	Ribosomal protein L1
RPK_00985	SSF160369	Ribosomal protein L10-like
RPK_00990	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
RPK_00990	SSF54736	ClpS-like
RPK_00995	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
RPK_01000	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
RPK_01010	SSF52949	Macro domain-like
RPK_01010	SSF53187	Zn-dependent exopeptidases
RPK_01015	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_01025	SSF50249	Nucleic acid-binding proteins
RPK_01025	SSF55261	GAD domain-like
RPK_01025	SSF55681	Class II aaRS and biotin synthetases
RPK_01040	SSF51735	NAD(P)-binding Rossmann-fold domains
RPK_01040	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPK_01045	SSF50475	FMN-binding split barrel
RPK_01050	SSF53850	Periplasmic binding protein-like II
RPK_01055	SSF55931	Glutamine synthetase/guanido kinase
RPK_01055	SSF89095	GatB/YqeY motif
RPK_01060	SSF75304	Amidase signature (AS) enzymes
RPK_01065	SSF141000	Glu-tRNAGln amidotransferase C subunit
RPK_01075	SSF55194	Ribosome recycling factor, RRF
RPK_01080	SSF53633	Carbamate kinase-like
RPK_01090	SSF103473	MFS general substrate transporter
RPK_01115	SSF50156	PDZ domain-like
RPK_01120	SSF48013	NusB-like
RPK_01125	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPK_01130	SSF53474	alpha/beta-Hydrolases
RPK_01140	SSF55961	Bet v1-like
RPK_01150	SSF75217	alpha/beta knot
RPK_01150	SSF88697	PUA domain-like
RPK_01160	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPK_01160	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPK_01160	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPK_01165	SSF47729	IHF-like DNA-binding proteins
RPK_01170	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_01175	SSF47446	Signal peptide-binding domain
RPK_01175	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_01210	SSF102114	Radical SAM enzymes
RPK_01220	SSF48403	Ankyrin repeat
RPK_01240	SSF118215	Proton glutamate symport protein
RPK_01245	SSF54913	GlnB-like
RPK_01250	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RPK_01255	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
RPK_01255	SSF51230	Single hybrid motif
RPK_01255	SSF52777	CoA-dependent acyltransferases
RPK_01265	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPK_01270	SSF55486	Metalloproteases ("zincins"), catalytic domain
RPK_01275	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_01280	SSF48452	TPR-like
RPK_01285	SSF140376	ChaB-like
RPK_01290	SSF140376	ChaB-like
RPK_01295	SSF46565	Chaperone J-domain
RPK_01295	SSF49493	HSP40/DnaJ peptide-binding domain
RPK_01295	SSF57938	DnaJ/Hsp40 cysteine-rich domain
RPK_01300	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
RPK_01300	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
RPK_01300	SSF53067	Actin-like ATPase domain
RPK_01305	SSF50156	PDZ domain-like
RPK_01305	SSF50494	Trypsin-like serine proteases
RPK_01325	SSF48019	post-AAA+ oligomerization domain-like
RPK_01325	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_01330	SSF47240	Ferritin-like
RPK_01335	SSF81452	Cytochrome c oxidase subunit III-like
RPK_01350	SSF51161	Trimeric LpxA-like enzymes
RPK_01420	SSF103515	Autotransporter
RPK_01430	SSF52402	Adenine nucleotide alpha hydrolases-like
RPK_01435	SSF53850	Periplasmic binding protein-like II
RPK_01445	SSF54292	2Fe-2S ferredoxin-like
RPK_01450	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
RPK_01450	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
RPK_01450	SSF53067	Actin-like ATPase domain
RPK_01455	SSF46565	Chaperone J-domain
RPK_01455	SSF47144	HSC20 (HSCB), C-terminal oligomerisation domain
RPK_01460	SSF53098	Ribonuclease H-like
RPK_01465	SSF46600	C-terminal UvrC-binding domain of UvrB
RPK_01465	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_01470	SSF52833	Thioredoxin-like
RPK_01485	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_01485	SSF90123	ABC transporter transmembrane region
RPK_01500	SSF101904	GyrA/ParC C-terminal domain-like
RPK_01500	SSF56719	Type II DNA topoisomerase
RPK_01505	SSF118215	Proton glutamate symport protein
RPK_01510	SSF118215	Proton glutamate symport protein
RPK_01525	SSF140319	IscX-like
RPK_01535	SSF56420	Peptide deformylase
RPK_01540	SSF50486	FMT C-terminal domain-like
RPK_01540	SSF53328	Formyltransferase
RPK_01560	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_01570	SSF111337	QueA-like
RPK_01575	SSF48403	Ankyrin repeat
RPK_01590	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_01590	SSF90123	ABC transporter transmembrane region
RPK_01610	SSF143120	YefM-like
RPK_01615	SSF143011	RelE-like
RPK_01620	SSF53448	Nucleotide-diphospho-sugar transferases
RPK_01625	SSF63411	LuxS/MPP-like metallohydrolase
RPK_01630	SSF56104	SAICAR synthase-like
RPK_01640	SSF52954	Class II aaRS ABD-related
RPK_01640	SSF55186	ThrRS/AlaRS common domain
RPK_01640	SSF55681	Class II aaRS and biotin synthetases
RPK_01640	SSF81271	TGS-like
RPK_01650	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_01655	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_01660	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_01700	SSF56954	Outer membrane efflux proteins (OEP)
RPK_01715	SSF48403	Ankyrin repeat
RPK_01720	SSF54211	Ribosomal protein S5 domain 2-like
RPK_01720	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPK_01720	SSF56719	Type II DNA topoisomerase
RPK_01725	SSF50156	PDZ domain-like
RPK_01725	SSF52096	ClpP/crotonase
RPK_01730	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPK_01730	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPK_01735	SSF48452	TPR-like
RPK_01745	SSF50998	Quinoprotein alcohol dehydrogenase-like
RPK_01750	SSF52161	Ribosomal protein L13
RPK_01755	SSF54211	Ribosomal protein S5 domain 2-like
RPK_01770	SSF55166	Hedgehog/DD-peptidase
RPK_01775	SSF55248	PCD-like
RPK_01790	SSF55811	Nudix
RPK_01795	SSF52172	CheY-like
RPK_01795	SSF55073	Nucleotide cyclase
RPK_01800	SSF50104	Translation proteins SH3-like domain
RPK_01800	SSF50249	Nucleic acid-binding proteins
RPK_01805	SSF56655	Carbohydrate phosphatase
RPK_01825	SSF111369	HlyD-like secretion proteins
RPK_01845	SSF82657	BolA-like
RPK_01850	SSF141868	EAL domain-like
RPK_01855	SSF51984	MurCD N-terminal domain
RPK_01855	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPK_01855	SSF53623	MurD-like peptide ligases, catalytic domain
RPK_01860	SSF56176	FAD-binding/transporter-associated domain-like
RPK_01860	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
RPK_01865	SSF52440	PreATP-grasp domain
RPK_01865	SSF56059	Glutathione synthetase ATP-binding domain-like
RPK_01875	SSF53067	Actin-like ATPase domain
RPK_01885	SSF46626	Cytochrome c
RPK_01895	SSF54211	Ribosomal protein S5 domain 2-like
RPK_01900	SSF103473	MFS general substrate transporter
RPK_01905	SSF50249	Nucleic acid-binding proteins
RPK_01915	SSF55120	Pseudouridine synthase
RPK_01915	SSF55174	Alpha-L RNA-binding motif
RPK_01935	SSF56219	DNase I-like
RPK_01940	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPK_01945	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPK_01945	SSF52922	TK C-terminal domain-like
RPK_01950	SSF50447	Translation proteins
RPK_01950	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_01950	SSF54980	EF-G C-terminal domain-like
RPK_01965	SSF111384	OmpH-like
RPK_01970	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPK_01995	SSF50022	ISP domain
RPK_02000	SSF81342	Transmembrane di-heme cytochromes
RPK_02000	SSF81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
RPK_02010	SSF46626	Cytochrome c
RPK_02010	SSF81496	Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
RPK_02020	SSF49764	HSP20-like chaperones
RPK_02040	SSF75620	Release factor
RPK_02045	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_02045	SSF54980	EF-G C-terminal domain-like
RPK_02080	SSF48371	ARM repeat
RPK_02105	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_02115	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPK_02120	SSF101386	all-alpha NTP pyrophosphatases
RPK_02155	SSF53448	Nucleotide-diphospho-sugar transferases
RPK_02160	SSF75625	YebC-like
RPK_02165	SSF57840	Ribosomal protein L36
RPK_02185	SSF53955	Lysozyme-like
RPK_02205	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPK_02215	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPK_02220	SSF51905	FAD/NAD(P)-binding domain
RPK_02220	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RPK_02225	SSF100950	NagB/RpiA/CoA transferase-like
RPK_02235	SSF47819	HRDC-like
RPK_02235	SSF53098	Ribonuclease H-like
RPK_02245	SSF103025	Folate-binding domain
RPK_02255	SSF48403	Ankyrin repeat
RPK_02270	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPK_02275	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPK_02280	SSF141986	LD-carboxypeptidase A C-terminal domain-like
RPK_02280	SSF52317	Class I glutamine amidotransferase-like
RPK_02285	SSF53850	Periplasmic binding protein-like II
RPK_02285	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
RPK_02315	SSF52374	Nucleotidylyl transferase
RPK_02320	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
RPK_02340	SSF53474	alpha/beta-Hydrolases
RPK_02345	SSF81901	HCP-like
RPK_02355	SSF69618	HemD-like
RPK_02370	SSF103473	MFS general substrate transporter
RPK_02400	SSF48576	Terpenoid synthases
RPK_02405	SSF53092	Creatinase/prolidase N-terminal domain
RPK_02405	SSF55920	Creatinase/aminopeptidase
RPK_02415	SSF89360	HesB-like domain
RPK_02420	SSF82649	SufE/NifU
RPK_02425	SSF53383	PLP-dependent transferases
RPK_02430	SSF53383	PLP-dependent transferases
RPK_02435	SSF46785	"Winged helix" DNA-binding domain
RPK_02480	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPK_02495	SSF51395	FMN-linked oxidoreductases
RPK_02500	SSF52096	ClpP/crotonase
RPK_02505	SSF50249	Nucleic acid-binding proteins
RPK_02510	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_02515	SSF47413	lambda repressor-like DNA-binding domains
RPK_02575	SSF47729	IHF-like DNA-binding proteins
RPK_02580	SSF52096	ClpP/crotonase
RPK_02585	SSF50249	Nucleic acid-binding proteins
RPK_02585	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_02585	SSF68912	Rho N-terminal domain-like
RPK_02590	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPK_02595	SSF64182	DHH phosphoesterases
RPK_02600	SSF75620	Release factor
RPK_02605	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
RPK_02605	SSF51230	Single hybrid motif
RPK_02605	SSF52777	CoA-dependent acyltransferases
RPK_02610	SSF54364	Translation initiation factor IF3, N-terminal domain
RPK_02610	SSF55200	Translation initiation factor IF3, C-terminal domain
RPK_02640	SSF55681	Class II aaRS and biotin synthetases
RPK_02665	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
RPK_02665	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
RPK_02670	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPK_02670	SSF53623	MurD-like peptide ligases, catalytic domain
RPK_02680	SSF52317	Class I glutamine amidotransferase-like
RPK_02685	SSF47616	GST C-terminal domain-like
RPK_02685	SSF52833	Thioredoxin-like
RPK_02690	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPK_02690	SSF52009	Phosphohistidine domain
RPK_02690	SSF56059	Glutathione synthetase ATP-binding domain-like
RPK_02700	SSF53639	AraD/HMP-PK domain-like
RPK_02705	SSF88723	PIN domain-like
RPK_02715	SSF56420	Peptide deformylase
RPK_02720	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
RPK_02725	SSF55931	Glutamine synthetase/guanido kinase
RPK_02735	SSF47413	lambda repressor-like DNA-binding domains
RPK_02750	SSF55120	Pseudouridine synthase
RPK_02755	SSF47060	S15/NS1 RNA-binding domain
RPK_02760	SSF46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
RPK_02760	SSF50249	Nucleic acid-binding proteins
RPK_02760	SSF54211	Ribosomal protein S5 domain 2-like
RPK_02760	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
RPK_02760	SSF55666	Ribonuclease PH domain 2-like
RPK_02765	SSF53697	SIS domain
RPK_02780	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_02790	SSF53738	Phosphoglucomutase, first 3 domains
RPK_02790	SSF55957	Phosphoglucomutase, C-terminal domain
RPK_02800	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_02820	SSF141571	Pentapeptide repeat-like
RPK_02825	SSF47240	Ferritin-like
RPK_02830	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
RPK_02830	SSF51998	PFL-like glycyl radical enzymes
RPK_02880	SSF49354	PapD-like
RPK_02895	SSF51905	FAD/NAD(P)-binding domain
RPK_02900	SSF51735	NAD(P)-binding Rossmann-fold domains
RPK_02900	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RPK_02905	SSF51161	Trimeric LpxA-like enzymes
RPK_02910	SSF69754	Ribosome binding protein Y (YfiA homologue)
RPK_02950	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_02950	SSF54211	Ribosomal protein S5 domain 2-like
RPK_02950	SSF88697	PUA domain-like
RPK_02955	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPK_02980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_02985	SSF53448	Nucleotide-diphospho-sugar transferases
RPK_03000	SSF53720	ALDH-like
RPK_03020	SSF51905	FAD/NAD(P)-binding domain
RPK_03025	SSF53474	alpha/beta-Hydrolases
RPK_03035	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPK_03035	SSF51735	NAD(P)-binding Rossmann-fold domains
RPK_03040	SSF56281	Metallo-hydrolase/oxidoreductase
RPK_03045	SSF111331	NAD kinase/diacylglycerol kinase-like
RPK_03070	SSF111304	Recombination protein RecR
RPK_03085	SSF89919	Ribosome-binding factor A, RbfA
RPK_03100	SSF54427	NTF2-like
RPK_03105	SSF53474	alpha/beta-Hydrolases
RPK_03105	SSF82171	DPP6 N-terminal domain-like
RPK_03110	SSF81342	Transmembrane di-heme cytochromes
RPK_03120	SSF89447	AbrB/MazE/MraZ-like
RPK_03135	SSF52210	Succinyl-CoA synthetase domains
RPK_03135	SSF56059	Glutathione synthetase ATP-binding domain-like
RPK_03140	SSF51735	NAD(P)-binding Rossmann-fold domains
RPK_03140	SSF52210	Succinyl-CoA synthetase domains
RPK_03145	SSF52833	Thioredoxin-like
RPK_03150	SSF74982	Small protein B (SmpB)
RPK_03155	SSF51569	Aldolase
RPK_03160	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
RPK_03165	SSF46894	C-terminal effector domain of the bipartite response regulators
RPK_03165	SSF52172	CheY-like
RPK_03170	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPK_03170	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPK_03175	SSF64005	Undecaprenyl diphosphate synthase
RPK_03190	SSF53098	Ribonuclease H-like
RPK_03195	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPK_03195	SSF50677	ValRS/IleRS/LeuRS editing domain
RPK_03195	SSF52374	Nucleotidylyl transferase
RPK_03215	SSF55979	DNA clamp
RPK_03220	SSF46955	Putative DNA-binding domain
RPK_03220	SSF50249	Nucleic acid-binding proteins
RPK_03220	SSF54991	Anticodon-binding domain of PheRS
RPK_03220	SSF55681	Class II aaRS and biotin synthetases
RPK_03220	SSF56037	PheT/TilS domain
RPK_03225	SSF46589	tRNA-binding arm
RPK_03225	SSF55681	Class II aaRS and biotin synthetases
RPK_03230	SSF102114	Radical SAM enzymes
RPK_03235	SSF54506	Diaminopimelate epimerase-like
RPK_03250	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPK_03290	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPK_03290	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPK_03295	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPK_03300	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPK_03305	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPK_03305	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPK_03330	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPK_03340	SSF51984	MurCD N-terminal domain
RPK_03340	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPK_03340	SSF53623	MurD-like peptide ligases, catalytic domain
RPK_03355	SSF51261	Duplicated hybrid motif
RPK_03360	SSF49503	Cupredoxins
RPK_03360	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
RPK_03365	SSF51161	Trimeric LpxA-like enzymes
RPK_03370	SSF81442	Cytochrome c oxidase subunit I-like
RPK_03375	SSF52317	Class I glutamine amidotransferase-like
RPK_03385	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_03385	SSF52980	Restriction endonuclease-like
RPK_03390	SSF141986	LD-carboxypeptidase A C-terminal domain-like
RPK_03390	SSF52317	Class I glutamine amidotransferase-like
RPK_03400	SSF48435	Bacterial muramidases
RPK_03400	SSF53955	Lysozyme-like
RPK_03405	SSF51283	dUTPase-like
RPK_03410	SSF52096	ClpP/crotonase
RPK_03415	SSF52833	Thioredoxin-like
RPK_03420	SSF49482	Aromatic compound dioxygenase
RPK_03425	SSF54534	FKBP-like
RPK_03430	SSF49503	Cupredoxins
RPK_03450	SSF50685	Barwin-like endoglucanases
RPK_03455	SSF56601	beta-lactamase/transpeptidase-like
RPK_03460	SSF103473	MFS general substrate transporter
RPK_03465	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_03465	SSF90123	ABC transporter transmembrane region
RPK_03470	SSF46785	"Winged helix" DNA-binding domain
RPK_03470	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_03485	SSF46929	DNA helicase RuvA subunit, C-terminal domain
RPK_03485	SSF47781	RuvA domain 2-like
RPK_03485	SSF50249	Nucleic acid-binding proteins
RPK_03495	SSF140931	Fic-like
RPK_03500	SSF52954	Class II aaRS ABD-related
RPK_03500	SSF55681	Class II aaRS and biotin synthetases
RPK_03505	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RPK_03510	SSF81442	Cytochrome c oxidase subunit I-like
RPK_03525	SSF53448	Nucleotide-diphospho-sugar transferases
RPK_03530	SSF52317	Class I glutamine amidotransferase-like
RPK_03530	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_03550	SSF51735	NAD(P)-binding Rossmann-fold domains
RPK_03550	SSF56327	LDH C-terminal domain-like
RPK_03590	SSF103473	MFS general substrate transporter
RPK_03595	SSF89447	AbrB/MazE/MraZ-like
RPK_03600	SSF88723	PIN domain-like
RPK_03615	SSF51735	NAD(P)-binding Rossmann-fold domains
RPK_03615	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RPK_03615	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPK_03625	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
RPK_03625	SSF52374	Nucleotidylyl transferase
RPK_03630	SSF158442	DsbB-like
RPK_03645	SSF48403	Ankyrin repeat
RPK_03655	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_03665	SSF53822	Periplasmic binding protein-like I
RPK_03670	SSF47090	PGBD-like
RPK_03670	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
RPK_03680	SSF56317	Carbon-nitrogen hydrolase
RPK_03685	SSF51735	NAD(P)-binding Rossmann-fold domains
RPK_03700	SSF56349	DNA breaking-rejoining enzymes
RPK_03730	SSF56770	HydA/Nqo6-like
RPK_03735	SSF143243	Nqo5-like
RPK_03740	SSF56762	HydB/Nqo4-like
RPK_03745	SSF52833	Thioredoxin-like
RPK_03760	SSF50486	FMT C-terminal domain-like
RPK_03780	SSF116842	XseB-like
RPK_03790	SSF50346	PRC-barrel domain
RPK_03790	SSF50447	Translation proteins
RPK_03800	SSF48439	Protein prenylyltransferase
RPK_03820	SSF55174	Alpha-L RNA-binding motif
RPK_03835	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPK_03840	SSF53474	alpha/beta-Hydrolases
RPK_03850	SSF111369	HlyD-like secretion proteins
RPK_03855	SSF53448	Nucleotide-diphospho-sugar transferases
RPK_03860	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPK_03865	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPK_03870	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPK_03875	SSF51735	NAD(P)-binding Rossmann-fold domains
RPK_03880	SSF51735	NAD(P)-binding Rossmann-fold domains
RPK_03890	SSF47413	lambda repressor-like DNA-binding domains
RPK_03895	SSF53098	Ribonuclease H-like
RPK_03900	SSF53649	Alkaline phosphatase-like
RPK_03910	SSF117892	Band 7/SPFH domain
RPK_03915	SSF52833	Thioredoxin-like
RPK_03925	SSF102405	MCP/YpsA-like
RPK_03935	SSF56712	Prokaryotic type I DNA topoisomerase
RPK_03935	SSF57783	Zinc beta-ribbon
RPK_03940	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
RPK_03940	SSF52374	Nucleotidylyl transferase
RPK_03975	SSF55387	Frataxin/Nqo15-like
RPK_03990	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPK_04025	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_04030	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPK_04045	SSF54197	HIT-like
RPK_04050	SSF51735	NAD(P)-binding Rossmann-fold domains
RPK_04050	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPK_04055	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_04055	SSF90123	ABC transporter transmembrane region
RPK_04065	SSF103473	MFS general substrate transporter
RPK_04070	SSF109604	HD-domain/PDEase-like
RPK_04075	SSF74653	TolA/TonB C-terminal domain
RPK_04125	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_04130	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_04135	SSF52954	Class II aaRS ABD-related
RPK_04135	SSF55681	Class II aaRS and biotin synthetases
RPK_04145	SSF52402	Adenine nucleotide alpha hydrolases-like
RPK_04150	SSF53448	Nucleotide-diphospho-sugar transferases
RPK_04155	SSF110111	Ctag/Cox11
RPK_04160	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPK_04160	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPK_04165	SSF52964	TolB, N-terminal domain
RPK_04165	SSF69304	Tricorn protease N-terminal domain
RPK_04170	SSF69796	Thymidylate synthase-complementing protein Thy1
RPK_04180	SSF51261	Duplicated hybrid motif
RPK_04185	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
RPK_04190	SSF48334	DNA repair protein MutS, domain III
RPK_04190	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_04190	SSF53150	DNA repair protein MutS, domain II
RPK_04190	SSF55271	DNA repair protein MutS, domain I
RPK_04195	SSF56655	Carbohydrate phosphatase
RPK_04240	SSF53067	Actin-like ATPase domain
RPK_04245	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_04250	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_04265	SSF54427	NTF2-like
RPK_04275	SSF54427	NTF2-like
RPK_04305	SSF88723	PIN domain-like
RPK_04315	SSF50993	Peptidase/esterase 'gauge' domain
RPK_04315	SSF53474	alpha/beta-Hydrolases
RPK_04330	SSF109604	HD-domain/PDEase-like
RPK_04370	SSF51569	Aldolase
RPK_04390	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_04395	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
RPK_04405	SSF48024	N-terminal domain of DnaB helicase
RPK_04405	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_04430	SSF55120	Pseudouridine synthase
RPK_04430	SSF55174	Alpha-L RNA-binding motif
RPK_04435	SSF141571	Pentapeptide repeat-like
RPK_04440	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPK_04445	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_04445	SSF54211	Ribosomal protein S5 domain 2-like
RPK_04455	SSF50249	Nucleic acid-binding proteins
RPK_04455	SSF57863	ArfGap/RecO-like zinc finger
RPK_04465	SSF53067	Actin-like ATPase domain
RPK_04475	SSF50447	Translation proteins
RPK_04475	SSF52156	Initiation factor IF2/eIF5b, domain 3
RPK_04475	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_04480	SSF47794	Rad51 N-terminal domain-like
RPK_04480	SSF50249	Nucleic acid-binding proteins
RPK_04480	SSF54814	Prokaryotic type KH domain (KH-domain type II)
RPK_04480	SSF69705	Transcription factor NusA, N-terminal domain
RPK_04485	SSF74942	YhbC-like, C-terminal domain
RPK_04485	SSF75420	YhbC-like, N-terminal domain
RPK_04500	SSF46785	"Winged helix" DNA-binding domain
RPK_04505	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPK_04505	SSF55174	Alpha-L RNA-binding motif
RPK_04510	SSF52374	Nucleotidylyl transferase
RPK_04510	SSF55174	Alpha-L RNA-binding motif
RPK_04560	SSF52047	RNI-like
RPK_04635	SSF51735	NAD(P)-binding Rossmann-fold domains
RPK_04640	SSF53271	PRTase-like
RPK_04675	SSF51905	FAD/NAD(P)-binding domain
RPK_04685	SSF46689	Homeodomain-like
RPK_04685	SSF52172	CheY-like
RPK_04685	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_04690	SSF141571	Pentapeptide repeat-like
RPK_04700	SSF56519	Penicillin binding protein dimerisation domain
RPK_04700	SSF56601	beta-lactamase/transpeptidase-like
RPK_04710	SSF56519	Penicillin binding protein dimerisation domain
RPK_04710	SSF56601	beta-lactamase/transpeptidase-like
RPK_04720	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPK_04720	SSF81799	Putative methyltransferase TM0872, insert domain
RPK_04725	SSF89447	AbrB/MazE/MraZ-like
RPK_04745	SSF46600	C-terminal UvrC-binding domain of UvrB
RPK_04745	SSF47781	RuvA domain 2-like
RPK_04745	SSF82771	GIY-YIG endonuclease
RPK_04750	SSF110087	DR1885-like metal-binding protein
RPK_04755	SSF48371	ARM repeat
RPK_04760	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
RPK_04775	SSF57884	Ada DNA repair protein, N-terminal domain (N-Ada 10)
RPK_04780	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
RPK_04780	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
RPK_04815	SSF48403	Ankyrin repeat
RPK_04820	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_04820	SSF81767	Pre-protein crosslinking domain of SecA
RPK_04820	SSF81886	Helical scaffold and wing domains of SecA
RPK_04825	SSF54534	FKBP-like
RPK_04830	SSF56214	4'-phosphopantetheinyl transferase
RPK_04835	SSF63562	RPB6/omega subunit-like
RPK_04840	SSF55205	EPT/RTPC-like
RPK_04845	SSF54211	Ribosomal protein S5 domain 2-like
RPK_04845	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPK_04845	SSF56719	Type II DNA topoisomerase
RPK_04850	SSF56784	HAD-like
RPK_04855	SSF158791	MgtE N-terminal domain-like
RPK_04855	SSF161093	MgtE membrane domain-like
RPK_04855	SSF54631	CBS-domain pair
RPK_04865	SSF109604	HD-domain/PDEase-like
RPK_04875	SSF103473	MFS general substrate transporter
RPK_04900	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPK_04905	SSF52833	Thioredoxin-like
RPK_04910	SSF82093	Heme chaperone CcmE
RPK_04915	SSF50324	Inorganic pyrophosphatase
RPK_04940	SSF50249	Nucleic acid-binding proteins
RPK_04940	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_04960	SSF100950	NagB/RpiA/CoA transferase-like
RPK_04965	SSF100950	NagB/RpiA/CoA transferase-like
RPK_04970	SSF52218	Flavoproteins
RPK_04980	SSF101447	Formin homology 2 domain (FH2 domain)
RPK_04990	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPK_04990	SSF53623	MurD-like peptide ligases, catalytic domain
RPK_04990	SSF63418	MurE/MurF N-terminal domain
RPK_04995	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPK_04995	SSF53623	MurD-like peptide ligases, catalytic domain
RPK_04995	SSF63418	MurE/MurF N-terminal domain
RPK_05000	SSF141259	CarD-like
RPK_05000	SSF143517	TRCF domain-like
RPK_05000	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_05005	SSF109910	YgfY-like
RPK_05010	SSF52821	Rhodanese/Cell cycle control phosphatase
RPK_05015	SSF48295	TrpR-like
RPK_05015	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_05055	SSF52151	FabD/lysophospholipase-like
RPK_05080	SSF81301	Nucleotidyltransferase
RPK_05085	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_05085	SSF81271	TGS-like
RPK_05090	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPK_05100	SSF53178	Peptidyl-tRNA hydrolase-like
RPK_05105	SSF50715	Ribosomal protein L25-like
RPK_05110	SSF102114	Radical SAM enzymes
RPK_05115	SSF143034	L35p-like
RPK_05120	SSF74731	Ribosomal protein L20
RPK_05130	SSF54211	Ribosomal protein S5 domain 2-like
RPK_05135	SSF140860	Pseudo ankyrin repeat-like
RPK_05150	SSF143865	CorA soluble domain-like
RPK_05150	SSF144083	Magnesium transport protein CorA, transmembrane region
RPK_05170	SSF56112	Protein kinase-like (PK-like)
RPK_05180	SSF158472	HAMP domain-like
RPK_05180	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPK_05180	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPK_05215	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPK_05215	SSF50677	ValRS/IleRS/LeuRS editing domain
RPK_05215	SSF52374	Nucleotidylyl transferase
RPK_05235	SSF48452	TPR-like
RPK_05245	SSF51230	Single hybrid motif
RPK_05245	SSF51246	Rudiment single hybrid motif
RPK_05245	SSF52440	PreATP-grasp domain
RPK_05245	SSF56059	Glutathione synthetase ATP-binding domain-like
RPK_05250	SSF52096	ClpP/crotonase
RPK_05260	SSF103473	MFS general substrate transporter
RPK_05260	SSF56801	Acetyl-CoA synthetase-like
RPK_05260	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
RPK_05265	SSF159894	YgaC/TfoX-N like
RPK_05270	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RPK_05275	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPK_05280	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
RPK_05280	SSF52374	Nucleotidylyl transferase
RPK_05295	SSF48592	GroEL equatorial domain-like
RPK_05295	SSF52029	GroEL apical domain-like
RPK_05295	SSF54849	GroEL-intermediate domain like
RPK_05300	SSF50129	GroES-like
RPK_05345	SSF54211	Ribosomal protein S5 domain 2-like
RPK_05345	SSF55666	Ribonuclease PH domain 2-like
RPK_05350	SSF51064	Head domain of nucleotide exchange factor GrpE
RPK_05350	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
RPK_05360	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_05400	SSF103473	MFS general substrate transporter
RPK_05405	SSF109604	HD-domain/PDEase-like
RPK_05410	SSF46992	Ribosomal protein S20
RPK_05415	SSF64263	Prokaryotic ribosomal protein L17
RPK_05420	SSF47789	C-terminal domain of RNA polymerase alpha subunit
RPK_05420	SSF55257	RBP11-like subunits of RNA polymerase
RPK_05420	SSF56553	Insert subdomain of RNA polymerase alpha subunit
RPK_05425	SSF53137	Translational machinery components
RPK_05430	SSF46946	S13-like H2TH domain
RPK_05435	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_05435	SSF57774	Microbial and mitochondrial ADK, insert "zinc finger" domain
RPK_05440	SSF103491	Preprotein translocase SecY subunit
RPK_05445	SSF52080	Ribosomal proteins L15p and L18e
RPK_05450	SSF55129	Ribosomal protein L30p/L7e
RPK_05455	SSF54211	Ribosomal protein S5 domain 2-like
RPK_05455	SSF54768	dsRNA-binding domain-like
RPK_05460	SSF53137	Translational machinery components
RPK_05465	SSF56053	Ribosomal protein L6
RPK_05470	SSF56047	Ribosomal protein S8
RPK_05475	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RPK_05480	SSF55282	RL5-like
RPK_05485	SSF50104	Translation proteins SH3-like domain
RPK_05490	SSF50193	Ribosomal protein L14
RPK_05495	SSF50249	Nucleic acid-binding proteins
RPK_05500	SSF46561	Ribosomal protein L29 (L29p)
RPK_05505	SSF54686	Ribosomal protein L16p/L10e
RPK_05510	SSF54814	Prokaryotic type KH domain (KH-domain type II)
RPK_05510	SSF54821	Ribosomal protein S3 C-terminal domain
RPK_05515	SSF54843	Ribosomal protein L22
RPK_05520	SSF54570	Ribosomal protein S19
RPK_05525	SSF50104	Translation proteins SH3-like domain
RPK_05525	SSF50249	Nucleic acid-binding proteins
RPK_05530	SSF54189	Ribosomal proteins S24e, L23 and L15e
RPK_05535	SSF52166	Ribosomal protein L4
RPK_05540	SSF50447	Translation proteins
RPK_05545	SSF54999	Ribosomal protein S10
RPK_05555	SSF50447	Translation proteins
RPK_05555	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
RPK_05555	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_05565	SSF55315	L30e-like
RPK_05565	SSF75217	alpha/beta knot
RPK_05575	SSF48557	L-aspartase-like
RPK_05580	SSF143120	YefM-like
RPK_05585	SSF88723	PIN domain-like
RPK_05590	SSF52490	Tubulin nucleotide-binding domain-like
RPK_05590	SSF55307	Tubulin C-terminal domain-like
RPK_05600	SSF49772	Ecotin, trypsin inhibitor
RPK_05605	SSF110836	Hypothetical protein SAV1430
RPK_05605	SSF117916	Fe-S cluster assembly (FSCA) domain-like
RPK_05610	SSF103473	MFS general substrate transporter
RPK_05615	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_05620	SSF50249	Nucleic acid-binding proteins
RPK_05625	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPK_05630	SSF109998	Triger factor/SurA peptide-binding domain-like
RPK_05660	SSF56219	DNase I-like
RPK_05670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_05675	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_05710	SSF56112	Protein kinase-like (PK-like)
RPK_05715	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPK_05720	SSF46946	S13-like H2TH domain
RPK_05720	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RPK_05720	SSF81624	N-terminal domain of MutM-like DNA repair proteins
RPK_05725	SSF53448	Nucleotide-diphospho-sugar transferases
RPK_05785	SSF51556	Metallo-dependent hydrolases
RPK_05790	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPK_05790	SSF52374	Nucleotidylyl transferase
RPK_05795	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_05800	SSF103473	MFS general substrate transporter
RPK_05825	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPK_05825	SSF50677	ValRS/IleRS/LeuRS editing domain
RPK_05825	SSF52374	Nucleotidylyl transferase
RPK_05855	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPK_05915	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_05915	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RPK_05920	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPK_05925	SSF52402	Adenine nucleotide alpha hydrolases-like
RPK_05930	SSF143100	TTHA1013/TTHA0281-like
RPK_05930	SSF47598	Ribbon-helix-helix
RPK_05935	SSF54786	YcfA/nrd intein domain
RPK_05940	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_05940	SSF90123	ABC transporter transmembrane region
RPK_05950	SSF103473	MFS general substrate transporter
RPK_05960	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_05965	SSF54001	Cysteine proteinases
RPK_05970	SSF54631	CBS-domain pair
RPK_05970	SSF56176	FAD-binding/transporter-associated domain-like
RPK_06010	SSF103515	Autotransporter
RPK_06015	SSF81301	Nucleotidyltransferase
RPK_06020	SSF51445	(Trans)glycosidases
RPK_06025	SSF46955	Putative DNA-binding domain
RPK_06030	SSF47729	IHF-like DNA-binding proteins
RPK_06035	SSF47162	Apolipoprotein
RPK_06040	SSF52833	Thioredoxin-like
RPK_06050	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_06055	SSF51261	Duplicated hybrid motif
RPK_06060	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPK_06065	SSF47781	RuvA domain 2-like
RPK_06065	SSF50249	Nucleic acid-binding proteins
RPK_06065	SSF52113	BRCT domain
RPK_06065	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
RPK_06075	SSF51713	tRNA-guanine transglycosylase
RPK_06080	SSF109604	HD-domain/PDEase-like
RPK_06125	SSF53098	Ribonuclease H-like
RPK_06130	SSF101738	SspB-like
RPK_06140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_06145	SSF53098	Ribonuclease H-like
RPK_06155	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_06170	SSF52151	FabD/lysophospholipase-like
RPK_06170	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
RPK_06245	SSF53474	alpha/beta-Hydrolases
RPK_06255	SSF55811	Nudix
RPK_06270	SSF54631	CBS-domain pair
RPK_06270	SSF56176	FAD-binding/transporter-associated domain-like
RPK_06275	SSF55486	Metalloproteases ("zincins"), catalytic domain
RPK_06280	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
RPK_06290	SSF102114	Radical SAM enzymes
RPK_06295	SSF53383	PLP-dependent transferases
RPK_06300	SSF53474	alpha/beta-Hydrolases
RPK_06305	SSF52833	Thioredoxin-like
RPK_06310	SSF48150	DNA-glycosylase
RPK_06350	SSF53790	Tetrapyrrole methylase
RPK_06355	SSF53822	Periplasmic binding protein-like I
RPK_06365	SSF101307	YutG-like
RPK_06370	SSF141091	L21p-like
RPK_06375	SSF110324	Ribosomal L27 protein-like
RPK_06380	SSF53633	Carbamate kinase-like
RPK_06380	SSF55021	ACT-like
RPK_06385	SSF47413	lambda repressor-like DNA-binding domains
RPK_06390	SSF56281	Metallo-hydrolase/oxidoreductase
RPK_06395	SSF56281	Metallo-hydrolase/oxidoreductase
RPK_06410	SSF103473	MFS general substrate transporter
RPK_06415	SSF102829	Cell division protein ZapA-like
RPK_06430	SSF51735	NAD(P)-binding Rossmann-fold domains
RPK_06430	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RPK_06435	SSF116878	TrmE connector domain
RPK_06435	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_06455	SSF103473	MFS general substrate transporter
RPK_06465	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_06465	SSF54752	RecA protein, C-terminal domain
RPK_06470	SSF51735	NAD(P)-binding Rossmann-fold domains
RPK_06475	SSF47336	ACP-like
RPK_06480	SSF53901	Thiolase-like
RPK_06485	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_06500	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_06505	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_06510	SSF47413	lambda repressor-like DNA-binding domains
RPK_06520	SSF53067	Actin-like ATPase domain
RPK_06530	SSF103088	OmpA-like
RPK_06540	SSF53901	Thiolase-like
RPK_06545	SSF57829	Zn-binding ribosomal proteins
RPK_06555	SSF47364	Domain of the SRP/SRP receptor G-proteins
RPK_06555	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_06560	SSF47807	5' to 3' exonuclease, C-terminal subdomain
RPK_06560	SSF53098	Ribonuclease H-like
RPK_06560	SSF56672	DNA/RNA polymerases
RPK_06560	SSF88723	PIN domain-like
RPK_06575	SSF55973	S-adenosylmethionine synthetase
RPK_06580	SSF55973	S-adenosylmethionine synthetase
RPK_06585	SSF55973	S-adenosylmethionine synthetase
RPK_06605	SSF89550	PHP domain-like
RPK_06610	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPK_06610	SSF51735	NAD(P)-binding Rossmann-fold domains
RPK_06610	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
RPK_06620	SSF103473	MFS general substrate transporter
RPK_06630	SSF46589	tRNA-binding arm
RPK_06630	SSF55681	Class II aaRS and biotin synthetases
RPK_06640	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_06655	SSF56925	OMPA-like
RPK_06660	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPK_06670	SSF47413	lambda repressor-like DNA-binding domains
RPK_06695	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_06700	SSF54862	4Fe-4S ferredoxins
RPK_06710	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
RPK_06710	SSF54292	2Fe-2S ferredoxin-like
RPK_06710	SSF54862	4Fe-4S ferredoxins
RPK_06720	SSF52016	LeuD/IlvD-like
RPK_06720	SSF53732	Aconitase iron-sulfur domain
RPK_06725	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
RPK_06730	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
RPK_06730	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
RPK_06730	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_06735	SSF52943	ATP synthase (F1-ATPase), gamma subunit
RPK_06740	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
RPK_06740	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
RPK_06740	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_06745	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
RPK_06750	SSF51905	FAD/NAD(P)-binding domain
RPK_06750	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RPK_06755	SSF47240	Ferritin-like
RPK_06775	SSF56601	beta-lactamase/transpeptidase-like
RPK_06780	SSF56601	beta-lactamase/transpeptidase-like
RPK_06785	SSF53955	Lysozyme-like
RPK_06785	SSF56601	beta-lactamase/transpeptidase-like
RPK_06790	SSF102114	Radical SAM enzymes
RPK_06835	SSF51735	NAD(P)-binding Rossmann-fold domains
RPK_06840	SSF81301	Nucleotidyltransferase
RPK_06845	SSF82657	BolA-like
RPK_06915	SSF50249	Nucleic acid-binding proteins
RPK_06920	SSF52972	ITPase-like
RPK_06925	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
RPK_06925	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RPK_06930	SSF56349	DNA breaking-rejoining enzymes
RPK_06940	SSF56024	Phospholipase D/nuclease
RPK_06955	SSF143968	UbiD C-terminal domain-like
RPK_06955	SSF50475	FMN-binding split barrel
RPK_06965	SSF103515	Autotransporter
RPK_06980	SSF46785	"Winged helix" DNA-binding domain
RPK_06980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_06990	SSF55920	Creatinase/aminopeptidase
RPK_07015	SSF56925	OMPA-like
RPK_07020	SSF56925	OMPA-like
RPK_07025	SSF54862	4Fe-4S ferredoxins
RPK_07035	SSF53927	Cytidine deaminase-like
RPK_07040	SSF160240	Cation efflux protein cytoplasmic domain-like
RPK_07040	SSF161111	Cation efflux protein transmembrane domain-like
RPK_07050	SSF49777	PEBP-like
RPK_07055	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_07085	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_07090	SSF50249	Nucleic acid-binding proteins
RPK_07095	SSF53474	alpha/beta-Hydrolases
RPK_07110	SSF69786	YggU-like
RPK_07115	SSF110942	HSP90 C-terminal domain
RPK_07115	SSF54211	Ribosomal protein S5 domain 2-like
RPK_07115	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPK_07120	SSF53383	PLP-dependent transferases
RPK_07135	SSF102735	Trigger factor ribosome-binding domain
RPK_07135	SSF109998	Triger factor/SurA peptide-binding domain-like
RPK_07135	SSF54534	FKBP-like
RPK_07140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_07140	SSF82051	Obg GTP-binding protein N-terminal domain
RPK_07145	SSF48256	Citrate synthase
RPK_07155	SSF52141	Uracil-DNA glycosylase-like
RPK_07160	SSF55120	Pseudouridine synthase
RPK_07160	SSF55174	Alpha-L RNA-binding motif
RPK_07175	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPK_07180	SSF55821	YrdC/RibB
RPK_07185	SSF109604	HD-domain/PDEase-like
RPK_07190	SSF55681	Class II aaRS and biotin synthetases
RPK_07195	SSF88723	PIN domain-like
RPK_07200	SSF143120	YefM-like
RPK_07235	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
RPK_07235	SSF50447	Translation proteins
RPK_07235	SSF55186	ThrRS/AlaRS common domain
RPK_07235	SSF55681	Class II aaRS and biotin synthetases
RPK_07240	SSF55120	Pseudouridine synthase
RPK_07245	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPK_07245	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPK_07250	SSF56731	DNA primase core
RPK_07250	SSF57783	Zinc beta-ribbon
RPK_07260	SSF46557	GreA transcript cleavage protein, N-terminal domain
RPK_07260	SSF54534	FKBP-like
RPK_07270	SSF51735	NAD(P)-binding Rossmann-fold domains
RPK_07270	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RPK_07275	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
RPK_07280	SSF48019	post-AAA+ oligomerization domain-like
RPK_07280	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_07285	SSF82607	YbaB-like
RPK_07300	SSF50630	Acid proteases
RPK_07305	SSF56601	beta-lactamase/transpeptidase-like
RPK_07320	SSF56601	beta-lactamase/transpeptidase-like
RPK_07330	SSF143120	YefM-like
RPK_07335	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPK_07340	SSF56281	Metallo-hydrolase/oxidoreductase
RPK_07345	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
RPK_07355	SSF143011	RelE-like
RPK_07365	SSF102400	DNA polymerase III chi subunit
RPK_07375	SSF53187	Zn-dependent exopeptidases
RPK_07375	SSF55031	Bacterial exopeptidase dimerisation domain
RPK_07390	SSF116734	DNA methylase specificity domain
RPK_07440	SSF55681	Class II aaRS and biotin synthetases
RPK_07445	SSF47090	PGBD-like
RPK_07445	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
RPK_07450	SSF54565	Ribosomal protein S16
RPK_07455	SSF57829	Zn-binding ribosomal proteins
RPK_07460	SSF118116	DNA mismatch repair protein MutL
RPK_07460	SSF54211	Ribosomal protein S5 domain 2-like
RPK_07460	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPK_07470	SSF51735	NAD(P)-binding Rossmann-fold domains
RPK_07480	SSF48452	TPR-like
RPK_07485	SSF103473	MFS general substrate transporter
RPK_07490	SSF102886	Coproporphyrinogen III oxidase
RPK_07510	SSF53800	Chelatase
RPK_07515	SSF51726	UROD/MetE-like