RIA_0016	PWY-2941	L-lysine biosynthesis II
RIA_0016	PWY-2942	L-lysine biosynthesis III
RIA_0016	PWY-5097	L-lysine biosynthesis VI
RIA_0024	PWY-5691	urate degradation to allantoin I
RIA_0024	PWY-7394	urate degradation to allantoin II
RIA_0050	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RIA_0050	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RIA_0058	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RIA_0058	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RIA_0062	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RIA_0062	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RIA_0066	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RIA_0067	PWY-6599	guanine and guanosine salvage II
RIA_0067	PWY-6609	adenine and adenosine salvage III
RIA_0067	PWY-6610	adenine and adenosine salvage IV
RIA_0067	PWY-6620	guanine and guanosine salvage
RIA_0070	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
RIA_0081	PWY-1361	benzoyl-CoA degradation I (aerobic)
RIA_0081	PWY-5109	2-methylbutanoate biosynthesis
RIA_0081	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RIA_0081	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RIA_0081	PWY-5177	glutaryl-CoA degradation
RIA_0081	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RIA_0081	PWY-6435	4-hydroxybenzoate biosynthesis V
RIA_0081	PWY-6583	pyruvate fermentation to butanol I
RIA_0081	PWY-6863	pyruvate fermentation to hexanol
RIA_0081	PWY-6883	pyruvate fermentation to butanol II
RIA_0081	PWY-6944	androstenedione degradation
RIA_0081	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RIA_0081	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RIA_0081	PWY-7007	methyl ketone biosynthesis
RIA_0081	PWY-7046	4-coumarate degradation (anaerobic)
RIA_0081	PWY-7094	fatty acid salvage
RIA_0081	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RIA_0081	PWY-735	jasmonic acid biosynthesis
RIA_0081	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RIA_0084	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RIA_0084	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RIA_0084	PWY-5989	stearate biosynthesis II (bacteria and plants)
RIA_0084	PWY-6113	superpathway of mycolate biosynthesis
RIA_0084	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RIA_0084	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RIA_0084	PWY-7096	triclosan resistance
RIA_0084	PWYG-321	mycolate biosynthesis
RIA_0085	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RIA_0085	PWY-5723	Rubisco shunt
RIA_0089	PWY-4381	fatty acid biosynthesis initiation I
RIA_0091	PWY-5839	menaquinol-7 biosynthesis
RIA_0091	PWY-5844	menaquinol-9 biosynthesis
RIA_0091	PWY-5849	menaquinol-6 biosynthesis
RIA_0091	PWY-5890	menaquinol-10 biosynthesis
RIA_0091	PWY-5891	menaquinol-11 biosynthesis
RIA_0091	PWY-5892	menaquinol-12 biosynthesis
RIA_0091	PWY-5895	menaquinol-13 biosynthesis
RIA_0123	PWY-2941	L-lysine biosynthesis II
RIA_0123	PWY-2942	L-lysine biosynthesis III
RIA_0123	PWY-5097	L-lysine biosynthesis VI
RIA_0266	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RIA_0266	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
RIA_0284	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RIA_0384	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RIA_0388	PWY-2201	folate transformations I
RIA_0388	PWY-3841	folate transformations II
RIA_0389	PWY-2201	folate transformations I
RIA_0389	PWY-3841	folate transformations II
RIA_0393	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
RIA_0393	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RIA_0395	PWY-6164	3-dehydroquinate biosynthesis I
RIA_0435	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
RIA_0442	PWY-5491	diethylphosphate degradation
RIA_0465	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RIA_0475	PWY-5057	L-valine degradation II
RIA_0475	PWY-5076	L-leucine degradation III
RIA_0475	PWY-5078	L-isoleucine degradation II
RIA_0475	PWY-5101	L-isoleucine biosynthesis II
RIA_0475	PWY-5103	L-isoleucine biosynthesis III
RIA_0475	PWY-5104	L-isoleucine biosynthesis IV
RIA_0475	PWY-5108	L-isoleucine biosynthesis V
RIA_0476	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RIA_0476	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
RIA_0476	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RIA_0476	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RIA_0476	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
RIA_0476	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RIA_0476	PWY-7205	CMP phosphorylation
RIA_0476	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RIA_0476	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RIA_0476	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RIA_0476	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RIA_0476	PWY-7224	purine deoxyribonucleosides salvage
RIA_0476	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RIA_0476	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RIA_0478	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RIA_0479	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
RIA_0479	PWY-6167	flavin biosynthesis II (archaea)
RIA_0479	PWY-6168	flavin biosynthesis III (fungi)
RIA_0482	PWY-40	putrescine biosynthesis I
RIA_0482	PWY-6305	putrescine biosynthesis IV
RIA_0485	PWY-6898	thiamin salvage III
RIA_0485	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RIA_0485	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RIA_0486	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RIA_0486	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RIA_0486	PWY-6268	adenosylcobalamin salvage from cobalamin
RIA_0486	PWY-6269	adenosylcobalamin salvage from cobinamide II
RIA_0489	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
RIA_0489	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
RIA_0489	PWY-5901	2,3-dihydroxybenzoate biosynthesis
RIA_0489	PWY-6406	salicylate biosynthesis I
RIA_0519	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RIA_0519	PWY-6153	autoinducer AI-2 biosynthesis I
RIA_0519	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
RIA_0527	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RIA_0543	PWY-6749	CMP-legionaminate biosynthesis I
RIA_0545	PWY-622	starch biosynthesis
RIA_0557	PWY-6936	seleno-amino acid biosynthesis
RIA_0601	PWY-5667	CDP-diacylglycerol biosynthesis I
RIA_0601	PWY-5981	CDP-diacylglycerol biosynthesis III
RIA_0609	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RIA_0609	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RIA_0618	PWY-5392	reductive TCA cycle II
RIA_0618	PWY-5537	pyruvate fermentation to acetate V
RIA_0618	PWY-5538	pyruvate fermentation to acetate VI
RIA_0618	PWY-5690	TCA cycle II (plants and fungi)
RIA_0618	PWY-5913	TCA cycle VI (obligate autotrophs)
RIA_0618	PWY-6728	methylaspartate cycle
RIA_0618	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RIA_0618	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RIA_0620	PWY-6174	mevalonate pathway II (archaea)
RIA_0620	PWY-7391	isoprene biosynthesis II (engineered)
RIA_0620	PWY-7524	mevalonate pathway III (archaea)
RIA_0620	PWY-922	mevalonate pathway I
RIA_0622	PWY-6167	flavin biosynthesis II (archaea)
RIA_0622	PWY-6168	flavin biosynthesis III (fungi)
RIA_0622	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RIA_0638	PWY-2723	trehalose degradation V
RIA_0638	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RIA_0638	PWY-5661	GDP-glucose biosynthesis
RIA_0638	PWY-7238	sucrose biosynthesis II
RIA_0638	PWY-7385	1,3-propanediol biosynthesis (engineered)
RIA_0670	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RIA_0670	PWY-6148	tetrahydromethanopterin biosynthesis
RIA_0670	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RIA_0670	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RIA_0671	PWY-5316	nicotine biosynthesis
RIA_0671	PWY-7342	superpathway of nicotine biosynthesis
RIA_0672	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RIA_0695	PWY-5686	UMP biosynthesis
RIA_0708	PWY-6654	phosphopantothenate biosynthesis III
RIA_0712	PWY-3781	aerobic respiration I (cytochrome c)
RIA_0712	PWY-4521	arsenite oxidation I (respiratory)
RIA_0712	PWY-6692	Fe(II) oxidation
RIA_0712	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RIA_0728	PWY-4702	phytate degradation I
RIA_0731	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RIA_0734	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RIA_0734	PWY-6596	adenosine nucleotides degradation I
RIA_0734	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RIA_0738	PWY-1281	sulfoacetaldehyde degradation I
RIA_0738	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RIA_0738	PWY-5482	pyruvate fermentation to acetate II
RIA_0738	PWY-5485	pyruvate fermentation to acetate IV
RIA_0738	PWY-5497	purine nucleobases degradation II (anaerobic)
RIA_0738	PWY-6637	sulfolactate degradation II
RIA_0738	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RIA_0753	PWY-6168	flavin biosynthesis III (fungi)
RIA_0753	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RIA_0774	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RIA_0774	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
RIA_0775	PWY-5663	tetrahydrobiopterin biosynthesis I
RIA_0775	PWY-5664	tetrahydrobiopterin biosynthesis II
RIA_0775	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RIA_0775	PWY-6703	preQ<sub>0</sub> biosynthesis
RIA_0775	PWY-6983	tetrahydrobiopterin biosynthesis III
RIA_0775	PWY-7442	drosopterin and aurodrosopterin biosynthesis
RIA_0783	PWY-6854	ethylene biosynthesis III (microbes)
RIA_0784	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RIA_0784	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
RIA_0786	PWY-5506	methanol oxidation to formaldehyde IV
RIA_0789	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RIA_0826	PWY-5381	pyridine nucleotide cycling (plants)
RIA_0833	PWY-6823	molybdenum cofactor biosynthesis
RIA_0833	PWY-6891	thiazole biosynthesis II (Bacillus)
RIA_0833	PWY-6892	thiazole biosynthesis I (E. coli)
RIA_0833	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RIA_0848	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RIA_0849	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RIA_0849	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RIA_0850	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RIA_0850	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RIA_0851	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RIA_0851	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RIA_0892	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RIA_0892	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RIA_0892	PWY-6896	thiamin salvage I
RIA_0892	PWY-6897	thiamin salvage II
RIA_0894	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RIA_0907	PWY-4381	fatty acid biosynthesis initiation I
RIA_0907	PWY-6799	fatty acid biosynthesis (plant mitochondria)
RIA_0907	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RIA_0917	PWY-2161	folate polyglutamylation
RIA_0945	PWY-381	nitrate reduction II (assimilatory)
RIA_0945	PWY-5675	nitrate reduction V (assimilatory)
RIA_0945	PWY-6549	L-glutamine biosynthesis III
RIA_0945	PWY-6963	ammonia assimilation cycle I
RIA_0945	PWY-6964	ammonia assimilation cycle II
RIA_0995	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RIA_0995	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
RIA_0997	PWY-6700	queuosine biosynthesis
RIA_1004	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RIA_1004	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RIA_1004	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RIA_1016	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RIA_1016	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RIA_1022	PWY-6167	flavin biosynthesis II (archaea)
RIA_1022	PWY-6168	flavin biosynthesis III (fungi)
RIA_1024	PWY-6605	adenine and adenosine salvage II
RIA_1024	PWY-6610	adenine and adenosine salvage IV
RIA_1041	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RIA_1041	PWY-6416	quinate degradation II
RIA_1041	PWY-6707	gallate biosynthesis
RIA_1047	PWY-5381	pyridine nucleotide cycling (plants)
RIA_1047	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RIA_1047	PWY-6596	adenosine nucleotides degradation I
RIA_1047	PWY-6606	guanosine nucleotides degradation II
RIA_1047	PWY-6607	guanosine nucleotides degradation I
RIA_1047	PWY-6608	guanosine nucleotides degradation III
RIA_1047	PWY-7185	UTP and CTP dephosphorylation I
RIA_1062	PWY-5367	petroselinate biosynthesis
RIA_1062	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RIA_1062	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RIA_1062	PWY-5989	stearate biosynthesis II (bacteria and plants)
RIA_1062	PWY-5994	palmitate biosynthesis I (animals and fungi)
RIA_1062	PWY-6113	superpathway of mycolate biosynthesis
RIA_1062	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RIA_1062	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RIA_1062	PWY-6951	RIA_1062
RIA_1062	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
RIA_1062	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RIA_1062	PWYG-321	mycolate biosynthesis
RIA_1065	PWY-7199	pyrimidine deoxyribonucleosides salvage
RIA_1067	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RIA_1071	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RIA_1071	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RIA_1077	PWY-2781	<i>cis</i>-zeatin biosynthesis
RIA_1078	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RIA_1078	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RIA_1084	PWY-3961	phosphopantothenate biosynthesis II
RIA_1089	PWY-5691	urate degradation to allantoin I
RIA_1089	PWY-7394	urate degradation to allantoin II
RIA_1111	PWY-5958	acridone alkaloid biosynthesis
RIA_1111	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RIA_1111	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RIA_1116	PWY-6749	CMP-legionaminate biosynthesis I
RIA_1121	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RIA_1121	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RIA_1130	PWY-6610	adenine and adenosine salvage IV
RIA_1132	PWY-1042	glycolysis IV (plant cytosol)
RIA_1132	PWY-5484	glycolysis II (from fructose 6-phosphate)
RIA_1132	PWY-6886	1-butanol autotrophic biosynthesis
RIA_1132	PWY-6901	superpathway of glucose and xylose degradation
RIA_1132	PWY-7003	glycerol degradation to butanol
RIA_1135	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
RIA_1135	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
RIA_1136	PWY-6854	ethylene biosynthesis III (microbes)
RIA_1149	PWY-2941	L-lysine biosynthesis II
RIA_1149	PWY-2942	L-lysine biosynthesis III
RIA_1149	PWY-5097	L-lysine biosynthesis VI
RIA_1149	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RIA_1149	PWY-6559	spermidine biosynthesis II
RIA_1149	PWY-6562	norspermidine biosynthesis
RIA_1149	PWY-7153	grixazone biosynthesis
RIA_1149	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RIA_1156	PWY-5669	phosphatidylethanolamine biosynthesis I
RIA_1186	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RIA_1186	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RIA_1186	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RIA_1187	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RIA_1187	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RIA_1189	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RIA_1189	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
RIA_1189	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RIA_1189	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RIA_1190	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RIA_1190	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RIA_1210	PWY-2941	L-lysine biosynthesis II
RIA_1210	PWY-2942	L-lysine biosynthesis III
RIA_1210	PWY-5097	L-lysine biosynthesis VI
RIA_1212	PWY-4981	L-proline biosynthesis II (from arginine)
RIA_1231	PWY-6167	flavin biosynthesis II (archaea)
RIA_1231	PWY-6168	flavin biosynthesis III (fungi)
RIA_1231	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RIA_1237	PWY-3341	L-proline biosynthesis III
RIA_1237	PWY-4981	L-proline biosynthesis II (from arginine)
RIA_1237	PWY-6344	L-ornithine degradation II (Stickland reaction)
RIA_1237	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RIA_1243	PWY-5659	GDP-mannose biosynthesis
RIA_1243	PWY-6073	alginate biosynthesis I (algal)
RIA_1243	PWY-6082	alginate biosynthesis II (bacterial)
RIA_1243	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
RIA_1257	PWY-1042	glycolysis IV (plant cytosol)
RIA_1257	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RIA_1257	PWY-5484	glycolysis II (from fructose 6-phosphate)
RIA_1257	PWY-5723	Rubisco shunt
RIA_1257	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RIA_1257	PWY-6886	1-butanol autotrophic biosynthesis
RIA_1257	PWY-6901	superpathway of glucose and xylose degradation
RIA_1257	PWY-7003	glycerol degradation to butanol
RIA_1257	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RIA_1257	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RIA_1276	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
RIA_1301	PWY-5674	nitrate reduction IV (dissimilatory)
RIA_1310	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RIA_1310	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RIA_1310	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
RIA_1311	PWY-1042	glycolysis IV (plant cytosol)
RIA_1311	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RIA_1311	PWY-5484	glycolysis II (from fructose 6-phosphate)
RIA_1311	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RIA_1311	PWY-7385	1,3-propanediol biosynthesis (engineered)
RIA_1312	PWY-4381	fatty acid biosynthesis initiation I
RIA_1312	PWY-5743	3-hydroxypropanoate cycle
RIA_1312	PWY-5744	glyoxylate assimilation
RIA_1312	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RIA_1312	PWY-6679	jadomycin biosynthesis
RIA_1312	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RIA_1318	PWY-5704	urea degradation II
RIA_1319	PWY-5704	urea degradation II
RIA_1320	PWY-5704	urea degradation II
RIA_1332	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RIA_1332	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
RIA_1361	PWY-4981	L-proline biosynthesis II (from arginine)
RIA_1365	PWY-1042	glycolysis IV (plant cytosol)
RIA_1365	PWY-1622	formaldehyde assimilation I (serine pathway)
RIA_1365	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RIA_1365	PWY-5484	glycolysis II (from fructose 6-phosphate)
RIA_1365	PWY-5723	Rubisco shunt
RIA_1365	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RIA_1365	PWY-6886	1-butanol autotrophic biosynthesis
RIA_1365	PWY-6901	superpathway of glucose and xylose degradation
RIA_1365	PWY-7003	glycerol degradation to butanol
RIA_1365	PWY-7124	ethylene biosynthesis V (engineered)
RIA_1365	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RIA_1374	PWY-5381	pyridine nucleotide cycling (plants)
RIA_1374	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
RIA_1378	PWY-5686	UMP biosynthesis
RIA_1386	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RIA_1386	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RIA_1386	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RIA_1386	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RIA_1396	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RIA_1397	PWY-4381	fatty acid biosynthesis initiation I
RIA_1397	PWY-5743	3-hydroxypropanoate cycle
RIA_1397	PWY-5744	glyoxylate assimilation
RIA_1397	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RIA_1397	PWY-6679	jadomycin biosynthesis
RIA_1397	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RIA_1421	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RIA_1421	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RIA_1421	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RIA_1421	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RIA_1421	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RIA_1421	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RIA_1421	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RIA_1421	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RIA_1422	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RIA_1422	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RIA_1422	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RIA_1422	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RIA_1422	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RIA_1422	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RIA_1422	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RIA_1422	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RIA_1452	PWY-101	photosynthesis light reactions
RIA_1452	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
RIA_1454	PWY-723	alkylnitronates degradation
RIA_1462	PWY-4381	fatty acid biosynthesis initiation I
RIA_1462	PWY-5743	3-hydroxypropanoate cycle
RIA_1462	PWY-5744	glyoxylate assimilation
RIA_1462	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RIA_1462	PWY-6679	jadomycin biosynthesis
RIA_1462	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RIA_1466	PWY-3781	aerobic respiration I (cytochrome c)
RIA_1466	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RIA_1466	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RIA_1466	PWY-5690	TCA cycle II (plants and fungi)
RIA_1466	PWY-6728	methylaspartate cycle
RIA_1466	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RIA_1466	PWY-7254	TCA cycle VII (acetate-producers)
RIA_1466	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RIA_1467	PWY-3781	aerobic respiration I (cytochrome c)
RIA_1467	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RIA_1467	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RIA_1467	PWY-5690	TCA cycle II (plants and fungi)
RIA_1467	PWY-6728	methylaspartate cycle
RIA_1467	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RIA_1467	PWY-7254	TCA cycle VII (acetate-producers)
RIA_1467	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RIA_1470	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
RIA_1470	PWY-7177	UTP and CTP dephosphorylation II
RIA_1470	PWY-7185	UTP and CTP dephosphorylation I
RIA_1481	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RIA_1482	PWY-901	methylglyoxal degradation II
RIA_1484	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
RIA_1484	PWY-2201	folate transformations I
RIA_1484	PWY-3841	folate transformations II
RIA_1484	PWY-5030	L-histidine degradation III
RIA_1484	PWY-5497	purine nucleobases degradation II (anaerobic)
RIA_1484	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
RIA_1485	PWY-3801	sucrose degradation II (sucrose synthase)
RIA_1485	PWY-5054	sorbitol biosynthesis I
RIA_1485	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
RIA_1485	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RIA_1485	PWY-5659	GDP-mannose biosynthesis
RIA_1485	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RIA_1485	PWY-621	sucrose degradation III (sucrose invertase)
RIA_1485	PWY-622	starch biosynthesis
RIA_1485	PWY-6531	mannitol cycle
RIA_1485	PWY-6981	chitin biosynthesis
RIA_1485	PWY-7238	sucrose biosynthesis II
RIA_1485	PWY-7347	sucrose biosynthesis III
RIA_1485	PWY-7385	1,3-propanediol biosynthesis (engineered)
RIA_1486	PWY-1622	formaldehyde assimilation I (serine pathway)
RIA_1486	PWY-181	photorespiration
RIA_1486	PWY-2161	folate polyglutamylation
RIA_1486	PWY-2201	folate transformations I
RIA_1486	PWY-3661	glycine betaine degradation I
RIA_1486	PWY-3661-1	glycine betaine degradation II (mammalian)
RIA_1486	PWY-3841	folate transformations II
RIA_1486	PWY-5497	purine nucleobases degradation II (anaerobic)
RIA_1509	PWY-3221	dTDP-L-rhamnose biosynthesis II
RIA_1509	PWY-6808	dTDP-D-forosamine biosynthesis
RIA_1509	PWY-6942	dTDP-D-desosamine biosynthesis
RIA_1509	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RIA_1509	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
RIA_1509	PWY-6974	dTDP-L-olivose biosynthesis
RIA_1509	PWY-6976	dTDP-L-mycarose biosynthesis
RIA_1509	PWY-7104	dTDP-L-megosamine biosynthesis
RIA_1509	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
RIA_1509	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
RIA_1509	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
RIA_1509	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
RIA_1509	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
RIA_1509	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
RIA_1509	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
RIA_1509	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
RIA_1510	PWY-3221	dTDP-L-rhamnose biosynthesis II
RIA_1510	PWY-6808	dTDP-D-forosamine biosynthesis
RIA_1510	PWY-6942	dTDP-D-desosamine biosynthesis
RIA_1510	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RIA_1510	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
RIA_1510	PWY-6974	dTDP-L-olivose biosynthesis
RIA_1510	PWY-6976	dTDP-L-mycarose biosynthesis
RIA_1510	PWY-7104	dTDP-L-megosamine biosynthesis
RIA_1510	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
RIA_1510	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
RIA_1510	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
RIA_1510	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
RIA_1510	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
RIA_1510	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
RIA_1510	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
RIA_1510	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
RIA_1512	PWY-3841	folate transformations II
RIA_1512	PWY-6614	tetrahydrofolate biosynthesis
RIA_1551	PWY-6853	ethylene biosynthesis II (microbes)
RIA_1566	PWY-6749	CMP-legionaminate biosynthesis I
RIA_1569	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RIA_1569	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
RIA_1573	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RIA_1573	PWY-5723	Rubisco shunt
RIA_1584	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
RIA_1584	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RIA_1590	PWY-4202	arsenate detoxification I (glutaredoxin)
RIA_1590	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RIA_1590	PWY-6608	guanosine nucleotides degradation III
RIA_1590	PWY-6609	adenine and adenosine salvage III
RIA_1590	PWY-6611	adenine and adenosine salvage V
RIA_1590	PWY-6620	guanine and guanosine salvage
RIA_1590	PWY-6627	salinosporamide A biosynthesis
RIA_1590	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
RIA_1590	PWY-7179	purine deoxyribonucleosides degradation I
RIA_1590	PWY-7179-1	purine deoxyribonucleosides degradation
RIA_1604	PWY-6123	inosine-5'-phosphate biosynthesis I
RIA_1604	PWY-7234	inosine-5'-phosphate biosynthesis III
RIA_1607	PWY-7391	isoprene biosynthesis II (engineered)
RIA_1607	PWY-922	mevalonate pathway I
RIA_1621	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RIA_1621	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RIA_1622	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RIA_1622	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RIA_1625	PWY-1622	formaldehyde assimilation I (serine pathway)
RIA_1625	PWY-5392	reductive TCA cycle II
RIA_1625	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RIA_1625	PWY-5690	TCA cycle II (plants and fungi)
RIA_1625	PWY-5913	TCA cycle VI (obligate autotrophs)
RIA_1625	PWY-6728	methylaspartate cycle
RIA_1625	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RIA_1625	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RIA_1625	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RIA_1634	PWY-2941	L-lysine biosynthesis II
RIA_1634	PWY-2942	L-lysine biosynthesis III
RIA_1634	PWY-5097	L-lysine biosynthesis VI
RIA_1634	PWY-6559	spermidine biosynthesis II
RIA_1634	PWY-6562	norspermidine biosynthesis
RIA_1634	PWY-7153	grixazone biosynthesis
RIA_1635	PWY-5484	glycolysis II (from fructose 6-phosphate)
RIA_1639	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RIA_1639	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RIA_1639	PWY-5989	stearate biosynthesis II (bacteria and plants)
RIA_1639	PWY-5994	palmitate biosynthesis I (animals and fungi)
RIA_1639	PWY-6113	superpathway of mycolate biosynthesis
RIA_1639	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RIA_1639	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RIA_1639	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RIA_1639	PWYG-321	mycolate biosynthesis
RIA_1643	PWY-5392	reductive TCA cycle II
RIA_1643	PWY-5537	pyruvate fermentation to acetate V
RIA_1643	PWY-5538	pyruvate fermentation to acetate VI
RIA_1643	PWY-5690	TCA cycle II (plants and fungi)
RIA_1643	PWY-5913	TCA cycle VI (obligate autotrophs)
RIA_1643	PWY-6728	methylaspartate cycle
RIA_1643	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RIA_1643	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RIA_1646	PWY-3841	folate transformations II
RIA_1646	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RIA_1646	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RIA_1646	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RIA_1646	PWY-7199	pyrimidine deoxyribonucleosides salvage
RIA_1646	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RIA_1658	PWY-1042	glycolysis IV (plant cytosol)
RIA_1658	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RIA_1658	PWY-5484	glycolysis II (from fructose 6-phosphate)
RIA_1658	PWY-7385	1,3-propanediol biosynthesis (engineered)
RIA_1659	PWY-1042	glycolysis IV (plant cytosol)
RIA_1659	PWY-5484	glycolysis II (from fructose 6-phosphate)
RIA_1659	PWY-6901	superpathway of glucose and xylose degradation
RIA_1659	PWY-7003	glycerol degradation to butanol
RIA_1679	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RIA_1679	PWY-6148	tetrahydromethanopterin biosynthesis
RIA_1679	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RIA_1679	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RIA_1715	PWY-5491	diethylphosphate degradation
RIA_1721	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RIA_1721	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
RIA_1721	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
RIA_1727	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RIA_1731	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RIA_1731	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RIA_1734	PWY-5155	&beta;-alanine biosynthesis III
RIA_1737	PWY-7205	CMP phosphorylation
RIA_1738	PWY-6614	tetrahydrofolate biosynthesis
RIA_1749	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RIA_1749	PWY-3461	L-tyrosine biosynthesis II
RIA_1749	PWY-3462	L-phenylalanine biosynthesis II
RIA_1749	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
RIA_1749	PWY-6120	L-tyrosine biosynthesis III
RIA_1749	PWY-6627	salinosporamide A biosynthesis
RIA_1754	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RIA_1754	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RIA_1754	PWY-6936	seleno-amino acid biosynthesis
RIA_1754	PWY-702	L-methionine biosynthesis II
RIA_1758	PWY-6012	acyl carrier protein metabolism I
RIA_1758	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
RIA_1772	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RIA_1783	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RIA_1783	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RIA_1783	PWY-6897	thiamin salvage II
RIA_1783	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RIA_1783	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RIA_1783	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
RIA_1783	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RIA_1789	PWY-6823	molybdenum cofactor biosynthesis
RIA_1789	PWY-6891	thiazole biosynthesis II (Bacillus)
RIA_1789	PWY-6892	thiazole biosynthesis I (E. coli)
RIA_1789	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RIA_1804	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RIA_1804	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RIA_1819	PWY-6700	queuosine biosynthesis
RIA_1826	PWY-5686	UMP biosynthesis
RIA_1827	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RIA_1827	PWY-5686	UMP biosynthesis
RIA_1827	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RIA_1830	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RIA_1830	PWY-5686	UMP biosynthesis
RIA_1830	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RIA_1840	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RIA_1841	PWY-2941	L-lysine biosynthesis II
RIA_1841	PWY-5097	L-lysine biosynthesis VI
RIA_1859	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RIA_1864	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RIA_1865	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RIA_1867	PWY-6829	tRNA methylation (yeast)
RIA_1867	PWY-7285	methylwyosine biosynthesis
RIA_1867	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
RIA_1875	PWY-5663	tetrahydrobiopterin biosynthesis I
RIA_1875	PWY-5664	tetrahydrobiopterin biosynthesis II
RIA_1875	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RIA_1875	PWY-6703	preQ<sub>0</sub> biosynthesis
RIA_1875	PWY-6983	tetrahydrobiopterin biosynthesis III
RIA_1875	PWY-7442	drosopterin and aurodrosopterin biosynthesis
RIA_1885	PWY-6123	inosine-5'-phosphate biosynthesis I
RIA_1885	PWY-6124	inosine-5'-phosphate biosynthesis II
RIA_1885	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RIA_1885	PWY-7234	inosine-5'-phosphate biosynthesis III
RIA_1893	PWY-3821	galactose degradation III
RIA_1893	PWY-6317	galactose degradation I (Leloir pathway)
RIA_1893	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RIA_1893	PWY-6527	stachyose degradation
RIA_1893	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
RIA_1893	PWY-7344	UDP-D-galactose biosynthesis
RIA_1910	PWY-5691	urate degradation to allantoin I
RIA_1910	PWY-7394	urate degradation to allantoin II
RIA_1913	PWY-5691	urate degradation to allantoin I
RIA_1913	PWY-7394	urate degradation to allantoin II
RIA_1919	PWY-6891	thiazole biosynthesis II (Bacillus)
RIA_1919	PWY-6892	thiazole biosynthesis I (E. coli)
RIA_1919	PWY-7560	methylerythritol phosphate pathway II
RIA_1925	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
RIA_1939	PWY-6556	pyrimidine ribonucleosides salvage II
RIA_1939	PWY-7181	pyrimidine deoxyribonucleosides degradation
RIA_1939	PWY-7193	pyrimidine ribonucleosides salvage I
RIA_1939	PWY-7199	pyrimidine deoxyribonucleosides salvage
RIA_1953	PWY-1622	formaldehyde assimilation I (serine pathway)
RIA_1953	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RIA_1953	PWY-5913	TCA cycle VI (obligate autotrophs)
RIA_1953	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RIA_1953	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
RIA_1953	PWY-6549	L-glutamine biosynthesis III
RIA_1953	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RIA_1953	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RIA_1953	PWY-7124	ethylene biosynthesis V (engineered)
RIA_1987	PWY-5839	menaquinol-7 biosynthesis
RIA_1987	PWY-5851	demethylmenaquinol-9 biosynthesis
RIA_1987	PWY-5852	demethylmenaquinol-8 biosynthesis I
RIA_1987	PWY-5853	demethylmenaquinol-6 biosynthesis I
RIA_1987	PWY-5890	menaquinol-10 biosynthesis
RIA_1987	PWY-5891	menaquinol-11 biosynthesis
RIA_1987	PWY-5892	menaquinol-12 biosynthesis
RIA_1987	PWY-5895	menaquinol-13 biosynthesis
RIA_1988	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
RIA_1988	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
RIA_1997	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RIA_1997	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
RIA_1998	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RIA_1998	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RIA_1998	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
RIA_2004	PWY-6123	inosine-5'-phosphate biosynthesis I
RIA_2004	PWY-6124	inosine-5'-phosphate biosynthesis II
RIA_2004	PWY-7234	inosine-5'-phosphate biosynthesis III
RIA_2020	PWY-1042	glycolysis IV (plant cytosol)
RIA_2020	PWY-5484	glycolysis II (from fructose 6-phosphate)
RIA_2020	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RIA_2020	PWY-7003	glycerol degradation to butanol
RIA_2026	PWY-7193	pyrimidine ribonucleosides salvage I
RIA_2032	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RIA_2037	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RIA_2037	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RIA_2037	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RIA_2037	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RIA_2038	PWY-6123	inosine-5'-phosphate biosynthesis I
RIA_2038	PWY-6124	inosine-5'-phosphate biosynthesis II
RIA_2038	PWY-7234	inosine-5'-phosphate biosynthesis III
RIA_2041	PWY-1361	benzoyl-CoA degradation I (aerobic)
RIA_2041	PWY-5109	2-methylbutanoate biosynthesis
RIA_2041	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RIA_2041	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RIA_2041	PWY-5177	glutaryl-CoA degradation
RIA_2041	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RIA_2041	PWY-6435	4-hydroxybenzoate biosynthesis V
RIA_2041	PWY-6583	pyruvate fermentation to butanol I
RIA_2041	PWY-6863	pyruvate fermentation to hexanol
RIA_2041	PWY-6883	pyruvate fermentation to butanol II
RIA_2041	PWY-6944	androstenedione degradation
RIA_2041	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RIA_2041	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RIA_2041	PWY-7007	methyl ketone biosynthesis
RIA_2041	PWY-7046	4-coumarate degradation (anaerobic)
RIA_2041	PWY-7094	fatty acid salvage
RIA_2041	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RIA_2041	PWY-735	jasmonic acid biosynthesis
RIA_2041	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RIA_2049	PWY-5958	acridone alkaloid biosynthesis
RIA_2049	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RIA_2049	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RIA_2050	PWY-5958	acridone alkaloid biosynthesis
RIA_2050	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RIA_2050	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RIA_2060	PWY-4041	&gamma;-glutamyl cycle
RIA_2060	PWY-5826	hypoglycin biosynthesis
RIA_2074	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
RIA_2074	PWY-2161	folate polyglutamylation
RIA_2074	PWY-2201	folate transformations I
RIA_2074	PWY-3841	folate transformations II
RIA_2091	PWY-5913	TCA cycle VI (obligate autotrophs)
RIA_2091	PWY-6549	L-glutamine biosynthesis III
RIA_2091	PWY-6728	methylaspartate cycle
RIA_2091	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RIA_2091	PWY-7124	ethylene biosynthesis V (engineered)
RIA_2091	PWY-7254	TCA cycle VII (acetate-producers)
RIA_2091	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RIA_2100	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RIA_2100	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
RIA_2101	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RIA_2101	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RIA_2101	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RIA_2105	PWY-5686	UMP biosynthesis
RIA_2131	PWY-1042	glycolysis IV (plant cytosol)
RIA_2131	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RIA_2131	PWY-5484	glycolysis II (from fructose 6-phosphate)
RIA_2131	PWY-5723	Rubisco shunt
RIA_2131	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RIA_2131	PWY-6886	1-butanol autotrophic biosynthesis
RIA_2131	PWY-6901	superpathway of glucose and xylose degradation
RIA_2131	PWY-7003	glycerol degradation to butanol
RIA_2131	PWY-7124	ethylene biosynthesis V (engineered)
RIA_2131	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RIA_2133	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
RIA_2133	PWY-6174	mevalonate pathway II (archaea)
RIA_2133	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
RIA_2133	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
RIA_2133	PWY-7102	bisabolene biosynthesis
RIA_2133	PWY-7391	isoprene biosynthesis II (engineered)
RIA_2133	PWY-7524	mevalonate pathway III (archaea)
RIA_2133	PWY-7560	methylerythritol phosphate pathway II
RIA_2133	PWY-922	mevalonate pathway I
RIA_2142	PWY-282	cuticular wax biosynthesis
RIA_2149	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RIA_2150	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RIA_2150	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RIA_2150	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
