RO1_00470	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RO1_00480	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RO1_00770	PWY-4261	glycerol degradation I
RO1_01130	PWY-1281	sulfoacetaldehyde degradation I
RO1_01130	PWY-5482	pyruvate fermentation to acetate II
RO1_01130	PWY-5485	pyruvate fermentation to acetate IV
RO1_01130	PWY-5497	purine nucleobases degradation II (anaerobic)
RO1_01130	PWY-6637	sulfolactate degradation II
RO1_01150	PWY-7205	CMP phosphorylation
RO1_01220	PWY-1042	glycolysis IV (plant cytosol)
RO1_01220	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RO1_01220	PWY-5484	glycolysis II (from fructose 6-phosphate)
RO1_01220	PWY-7385	1,3-propanediol biosynthesis (engineered)
RO1_01550	PWY-6891	thiazole biosynthesis II (Bacillus)
RO1_01550	PWY-6892	thiazole biosynthesis I (E. coli)
RO1_01550	PWY-7560	methylerythritol phosphate pathway II
RO1_01670	PWY-4041	&gamma;-glutamyl cycle
RO1_02100	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RO1_02400	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RO1_02400	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RO1_02400	PWY-6897	thiamin salvage II
RO1_02400	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RO1_02400	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RO1_02400	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
RO1_02400	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RO1_02410	PWY-6897	thiamin salvage II
RO1_02410	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
RO1_02410	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RO1_02430	PWY-5686	UMP biosynthesis
RO1_02500	PWY-1081	homogalacturonan degradation
RO1_02500	PWY-7246	pectin degradation II
RO1_02500	PWY-7248	pectin degradation III
RO1_02850	PWY-6502	oxidized GTP and dGTP detoxification
RO1_02930	PWY-1042	glycolysis IV (plant cytosol)
RO1_02930	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RO1_02930	PWY-5484	glycolysis II (from fructose 6-phosphate)
RO1_02930	PWY-5723	Rubisco shunt
RO1_02930	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RO1_02930	PWY-6886	1-butanol autotrophic biosynthesis
RO1_02930	PWY-6901	superpathway of glucose and xylose degradation
RO1_02930	PWY-7003	glycerol degradation to butanol
RO1_02930	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RO1_02930	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RO1_03430	PWY-2721	trehalose degradation III
RO1_03430	PWY-2722	trehalose degradation IV
RO1_03430	PWY-6317	galactose degradation I (Leloir pathway)
RO1_03430	PWY-7459	kojibiose degradation
RO1_03590	PWY-7205	CMP phosphorylation
RO1_03740	PWY-5057	L-valine degradation II
RO1_03740	PWY-5076	L-leucine degradation III
RO1_03740	PWY-5078	L-isoleucine degradation II
RO1_03740	PWY-5101	L-isoleucine biosynthesis II
RO1_03740	PWY-5103	L-isoleucine biosynthesis III
RO1_03740	PWY-5104	L-isoleucine biosynthesis IV
RO1_03740	PWY-5108	L-isoleucine biosynthesis V
RO1_03820	PWY-5941	glycogen degradation II (eukaryotic)
RO1_03820	PWY-622	starch biosynthesis
RO1_03820	PWY-6731	starch degradation III
RO1_03820	PWY-6737	starch degradation V
RO1_03820	PWY-7238	sucrose biosynthesis II
RO1_03930	PWY-2941	L-lysine biosynthesis II
RO1_03930	PWY-2942	L-lysine biosynthesis III
RO1_03930	PWY-5097	L-lysine biosynthesis VI
RO1_04060	PWY-1622	formaldehyde assimilation I (serine pathway)
RO1_04060	PWY-181	photorespiration
RO1_04060	PWY-2161	folate polyglutamylation
RO1_04060	PWY-2201	folate transformations I
RO1_04060	PWY-3661	glycine betaine degradation I
RO1_04060	PWY-3661-1	glycine betaine degradation II (mammalian)
RO1_04060	PWY-3841	folate transformations II
RO1_04060	PWY-5497	purine nucleobases degradation II (anaerobic)
RO1_04120	PWY-1042	glycolysis IV (plant cytosol)
RO1_04120	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RO1_04120	PWY-5484	glycolysis II (from fructose 6-phosphate)
RO1_04120	PWY-6531	mannitol cycle
RO1_04120	PWY-7385	1,3-propanediol biosynthesis (engineered)
RO1_05000	PWY-5381	pyridine nucleotide cycling (plants)
RO1_05130	PWY-381	nitrate reduction II (assimilatory)
RO1_05130	PWY-5675	nitrate reduction V (assimilatory)
RO1_05130	PWY-6549	L-glutamine biosynthesis III
RO1_05130	PWY-6963	ammonia assimilation cycle I
RO1_05130	PWY-6964	ammonia assimilation cycle II
RO1_05150	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RO1_05170	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RO1_05180	PWY-6700	queuosine biosynthesis
RO1_05270	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RO1_05280	PWY-5101	L-isoleucine biosynthesis II
RO1_05280	PWY-5103	L-isoleucine biosynthesis III
RO1_05280	PWY-5104	L-isoleucine biosynthesis IV
RO1_05280	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RO1_05290	PWY-5101	L-isoleucine biosynthesis II
RO1_05290	PWY-5103	L-isoleucine biosynthesis III
RO1_05290	PWY-5104	L-isoleucine biosynthesis IV
RO1_05290	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
RO1_05290	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RO1_05290	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RO1_05290	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RO1_05550	PWY-2941	L-lysine biosynthesis II
RO1_05550	PWY-2942	L-lysine biosynthesis III
RO1_05550	PWY-5097	L-lysine biosynthesis VI
RO1_05560	PWY-2941	L-lysine biosynthesis II
RO1_05560	PWY-2942	L-lysine biosynthesis III
RO1_05560	PWY-5097	L-lysine biosynthesis VI
RO1_05570	PWY-5484	glycolysis II (from fructose 6-phosphate)
RO1_05640	PWY-43	putrescine biosynthesis II
RO1_05650	PWY-43	putrescine biosynthesis II
RO1_06150	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RO1_06210	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RO1_06310	PWY-4983	L-citrulline-nitric oxide cycle
RO1_06310	PWY-4984	urea cycle
RO1_06310	PWY-5	canavanine biosynthesis
RO1_06310	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RO1_06310	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RO1_06320	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RO1_06320	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RO1_06340	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RO1_06350	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RO1_06350	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RO1_07120	PWY-6807	xyloglucan degradation II (exoglucanase)
RO1_07430	PWY-6823	molybdenum cofactor biosynthesis
RO1_07430	PWY-6891	thiazole biosynthesis II (Bacillus)
RO1_07430	PWY-6892	thiazole biosynthesis I (E. coli)
RO1_07430	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RO1_07600	PWY-7310	D-glucosaminate degradation
RO1_07640	PWY-1281	sulfoacetaldehyde degradation I
RO1_07640	PWY-5482	pyruvate fermentation to acetate II
RO1_07640	PWY-5485	pyruvate fermentation to acetate IV
RO1_07640	PWY-5497	purine nucleobases degradation II (anaerobic)
RO1_07640	PWY-6637	sulfolactate degradation II
RO1_07670	PWY-2941	L-lysine biosynthesis II
RO1_07670	PWY-5097	L-lysine biosynthesis VI
RO1_07840	PWY-5198	factor 420 biosynthesis
RO1_07840	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RO1_07850	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RO1_07940	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RO1_07940	PWY-6549	L-glutamine biosynthesis III
RO1_07940	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RO1_07940	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RO1_08350	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RO1_08370	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RO1_08390	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RO1_08710	PWY-6807	xyloglucan degradation II (exoglucanase)
RO1_09160	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RO1_09360	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RO1_09840	PWY-7560	methylerythritol phosphate pathway II
RO1_09900	PWY-3461	L-tyrosine biosynthesis II
RO1_09900	PWY-3462	L-phenylalanine biosynthesis II
RO1_09900	PWY-6120	L-tyrosine biosynthesis III
RO1_09900	PWY-6627	salinosporamide A biosynthesis
RO1_09900	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
RO1_10050	PWY-723	alkylnitronates degradation
RO1_10190	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
RO1_10190	PWY-6167	flavin biosynthesis II (archaea)
RO1_10190	PWY-6168	flavin biosynthesis III (fungi)
RO1_10380	PWY-6012	acyl carrier protein metabolism I
RO1_10380	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
RO1_10400	PWY-2201	folate transformations I
RO1_10400	PWY-3841	folate transformations II
RO1_10530	PWY-6910	hydroxymethylpyrimidine salvage
RO1_10530	PWY-7356	thiamin salvage IV (yeast)
RO1_10530	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RO1_10620	PWY-6807	xyloglucan degradation II (exoglucanase)
RO1_10650	PWY-6527	stachyose degradation
RO1_10690	PWY-5958	acridone alkaloid biosynthesis
RO1_10690	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RO1_10690	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RO1_10700	PWY-5958	acridone alkaloid biosynthesis
RO1_10700	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RO1_10700	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RO1_10860	PWY-5941	glycogen degradation II (eukaryotic)
RO1_10860	PWY-6724	starch degradation II
RO1_10860	PWY-6737	starch degradation V
RO1_10860	PWY-7238	sucrose biosynthesis II
RO1_10910	PWY-4202	arsenate detoxification I (glutaredoxin)
RO1_10910	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RO1_10910	PWY-6608	guanosine nucleotides degradation III
RO1_10910	PWY-6609	adenine and adenosine salvage III
RO1_10910	PWY-6611	adenine and adenosine salvage V
RO1_10910	PWY-6620	guanine and guanosine salvage
RO1_10910	PWY-6627	salinosporamide A biosynthesis
RO1_10910	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
RO1_10910	PWY-7179	purine deoxyribonucleosides degradation I
RO1_10910	PWY-7179-1	purine deoxyribonucleosides degradation
RO1_11110	PWY-101	photosynthesis light reactions
RO1_11110	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
RO1_11300	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RO1_11510	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RO1_11510	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RO1_11510	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RO1_11520	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RO1_11520	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RO1_11620	PWY-2941	L-lysine biosynthesis II
RO1_11620	PWY-5097	L-lysine biosynthesis VI
RO1_12100	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
RO1_12250	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RO1_12250	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
RO1_12250	PWY-6164	3-dehydroquinate biosynthesis I
RO1_12260	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RO1_12260	PWY-6416	quinate degradation II
RO1_12260	PWY-6707	gallate biosynthesis
RO1_12300	PWY-5481	pyruvate fermentation to lactate
RO1_12300	PWY-6901	superpathway of glucose and xylose degradation
RO1_12460	PWY-6891	thiazole biosynthesis II (Bacillus)
RO1_12460	PWY-6892	thiazole biosynthesis I (E. coli)
RO1_12460	PWY-7560	methylerythritol phosphate pathway II
RO1_12480	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RO1_12480	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RO1_12480	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
RO1_12500	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RO1_12500	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RO1_12500	PWY-6268	adenosylcobalamin salvage from cobalamin
RO1_12500	PWY-6269	adenosylcobalamin salvage from cobinamide II
RO1_12540	PWY-622	starch biosynthesis
RO1_12620	PWY-7193	pyrimidine ribonucleosides salvage I
RO1_12670	PWY-6892	thiazole biosynthesis I (E. coli)
RO1_12670	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RO1_12680	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RO1_12680	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RO1_12680	PWY-6897	thiamin salvage II
RO1_12680	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RO1_12680	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RO1_12680	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
RO1_12680	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RO1_12720	PWY-6936	seleno-amino acid biosynthesis
RO1_12810	PWY-6807	xyloglucan degradation II (exoglucanase)
RO1_12860	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RO1_12860	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RO1_12860	PWY-6269	adenosylcobalamin salvage from cobinamide II
RO1_12870	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RO1_12870	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RO1_12870	PWY-6269	adenosylcobalamin salvage from cobinamide II
RO1_12880	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RO1_12880	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RO1_12880	PWY-6269	adenosylcobalamin salvage from cobinamide II
RO1_12890	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RO1_12890	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RO1_12890	PWY-6269	adenosylcobalamin salvage from cobinamide II
RO1_12970	PWY-4983	L-citrulline-nitric oxide cycle
RO1_12970	PWY-4984	urea cycle
RO1_12970	PWY-5	canavanine biosynthesis
RO1_12970	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RO1_12970	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RO1_12980	PWY-2941	L-lysine biosynthesis II
RO1_12980	PWY-2942	L-lysine biosynthesis III
RO1_12980	PWY-5097	L-lysine biosynthesis VI
RO1_12980	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RO1_12980	PWY-6559	spermidine biosynthesis II
RO1_12980	PWY-6562	norspermidine biosynthesis
RO1_12980	PWY-7153	grixazone biosynthesis
RO1_12980	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RO1_13020	PWY-3221	dTDP-L-rhamnose biosynthesis II
RO1_13020	PWY-6808	dTDP-D-forosamine biosynthesis
RO1_13020	PWY-6942	dTDP-D-desosamine biosynthesis
RO1_13020	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RO1_13020	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
RO1_13020	PWY-6974	dTDP-L-olivose biosynthesis
RO1_13020	PWY-6976	dTDP-L-mycarose biosynthesis
RO1_13020	PWY-7104	dTDP-L-megosamine biosynthesis
RO1_13020	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
RO1_13020	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
RO1_13020	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
RO1_13020	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
RO1_13020	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
RO1_13020	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
RO1_13020	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
RO1_13020	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
RO1_13140	PWY-5101	L-isoleucine biosynthesis II
RO1_13140	PWY-5103	L-isoleucine biosynthesis III
RO1_13140	PWY-5104	L-isoleucine biosynthesis IV
RO1_13140	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
RO1_13140	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RO1_13140	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RO1_13140	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RO1_13150	PWY-5101	L-isoleucine biosynthesis II
RO1_13150	PWY-5103	L-isoleucine biosynthesis III
RO1_13150	PWY-5104	L-isoleucine biosynthesis IV
RO1_13150	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RO1_13480	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
RO1_13490	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
RO1_13490	PWY-7248	pectin degradation III
RO1_13870	PWY-5316	nicotine biosynthesis
RO1_13870	PWY-7342	superpathway of nicotine biosynthesis
RO1_13890	PWY-5316	nicotine biosynthesis
RO1_13890	PWY-5381	pyridine nucleotide cycling (plants)
RO1_13890	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
RO1_13890	PWY-7342	superpathway of nicotine biosynthesis
RO1_13930	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RO1_13960	PWY-5269	cardiolipin biosynthesis II
RO1_13960	PWY-5668	cardiolipin biosynthesis I
RO1_14280	PWY-5381	pyridine nucleotide cycling (plants)
RO1_14280	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
RO1_14400	PWY-7205	CMP phosphorylation
RO1_14430	PWY-6164	3-dehydroquinate biosynthesis I
RO1_14460	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RO1_14630	PWY-2781	<i>cis</i>-zeatin biosynthesis
RO1_14650	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RO1_14760	PWY-7181	pyrimidine deoxyribonucleosides degradation
RO1_14910	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
RO1_14910	PWY-2161	folate polyglutamylation
RO1_14910	PWY-2201	folate transformations I
RO1_14910	PWY-3841	folate transformations II
RO1_14950	PWY-622	starch biosynthesis
RO1_14990	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RO1_15000	PWY-6938	NADH repair
RO1_15030	PWY-5913	TCA cycle VI (obligate autotrophs)
RO1_15030	PWY-6549	L-glutamine biosynthesis III
RO1_15030	PWY-6728	methylaspartate cycle
RO1_15030	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RO1_15030	PWY-7124	ethylene biosynthesis V (engineered)
RO1_15030	PWY-7254	TCA cycle VII (acetate-producers)
RO1_15030	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RO1_15120	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
RO1_15220	PWY-6700	queuosine biosynthesis
RO1_15280	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RO1_15280	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RO1_15310	PWY-6556	pyrimidine ribonucleosides salvage II
RO1_15310	PWY-7181	pyrimidine deoxyribonucleosides degradation
RO1_15310	PWY-7193	pyrimidine ribonucleosides salvage I
RO1_15310	PWY-7199	pyrimidine deoxyribonucleosides salvage
RO1_15560	PWY-7560	methylerythritol phosphate pathway II
RO1_15570	PWY-7205	CMP phosphorylation
RO1_15620	PWY-6339	syringate degradation
RO1_15640	PWY-6339	syringate degradation
RO1_15650	PWY-4381	fatty acid biosynthesis initiation I
RO1_15650	PWY-5743	3-hydroxypropanoate cycle
RO1_15650	PWY-5744	glyoxylate assimilation
RO1_15650	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RO1_15650	PWY-6679	jadomycin biosynthesis
RO1_15650	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RO1_15660	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RO1_15660	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RO1_15700	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RO1_15700	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RO1_16510	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RO1_16510	PWY-5686	UMP biosynthesis
RO1_16510	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RO1_16520	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RO1_16520	PWY-5686	UMP biosynthesis
RO1_16520	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RO1_16580	PWY-1361	benzoyl-CoA degradation I (aerobic)
RO1_16580	PWY-5109	2-methylbutanoate biosynthesis
RO1_16580	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RO1_16580	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RO1_16580	PWY-5177	glutaryl-CoA degradation
RO1_16580	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RO1_16580	PWY-6435	4-hydroxybenzoate biosynthesis V
RO1_16580	PWY-6583	pyruvate fermentation to butanol I
RO1_16580	PWY-6863	pyruvate fermentation to hexanol
RO1_16580	PWY-6883	pyruvate fermentation to butanol II
RO1_16580	PWY-6944	androstenedione degradation
RO1_16580	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RO1_16580	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RO1_16580	PWY-7007	methyl ketone biosynthesis
RO1_16580	PWY-7046	4-coumarate degradation (anaerobic)
RO1_16580	PWY-7094	fatty acid salvage
RO1_16580	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RO1_16580	PWY-735	jasmonic acid biosynthesis
RO1_16580	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RO1_16840	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RO1_17140	PWY-3841	folate transformations II
RO1_17140	PWY-6614	tetrahydrofolate biosynthesis
RO1_17160	PWY-5101	L-isoleucine biosynthesis II
RO1_17160	PWY-5103	L-isoleucine biosynthesis III
RO1_17160	PWY-5104	L-isoleucine biosynthesis IV
RO1_17160	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
RO1_17160	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RO1_17160	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RO1_17160	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RO1_17170	PWY-5101	L-isoleucine biosynthesis II
RO1_17170	PWY-5103	L-isoleucine biosynthesis III
RO1_17170	PWY-5104	L-isoleucine biosynthesis IV
RO1_17170	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
RO1_17170	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RO1_17170	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RO1_17170	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RO1_17310	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RO1_17310	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
RO1_17310	PWY-7242	D-fructuronate degradation
RO1_17310	PWY-7310	D-glucosaminate degradation
RO1_17450	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
RO1_17580	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RO1_17690	PWY-6123	inosine-5'-phosphate biosynthesis I
RO1_17690	PWY-7234	inosine-5'-phosphate biosynthesis III
RO1_17710	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RO1_17710	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
RO1_17720	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RO1_17720	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RO1_17720	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RO1_17860	PWY-6749	CMP-legionaminate biosynthesis I
RO1_17930	PWY-6610	adenine and adenosine salvage IV
RO1_18010	PWY-6749	CMP-legionaminate biosynthesis I
RO1_18030	PWY-6527	stachyose degradation
RO1_18080	PWY-7456	mannan degradation
RO1_18090	PWY-7456	mannan degradation
RO1_18130	PWY-3121	linamarin degradation
RO1_18130	PWY-3861	mannitol degradation II
RO1_18130	PWY-3881	mannitol biosynthesis
RO1_18130	PWY-5176	coumarin biosynthesis (via 2-coumarate)
RO1_18130	PWY-5659	GDP-mannose biosynthesis
RO1_18130	PWY-6002	lotaustralin degradation
RO1_18130	PWY-6788	cellulose degradation II (fungi)
RO1_18130	PWY-7089	taxiphyllin bioactivation
RO1_18130	PWY-7091	linustatin bioactivation
RO1_18130	PWY-7092	neolinustatin bioactivation
RO1_18130	PWY-7456	mannan degradation
RO1_18130	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
RO1_18160	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
RO1_18160	PWY-2201	folate transformations I
RO1_18160	PWY-3841	folate transformations II
RO1_18160	PWY-5030	L-histidine degradation III
RO1_18160	PWY-5497	purine nucleobases degradation II (anaerobic)
RO1_18160	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
RO1_18170	PWY-5030	L-histidine degradation III
RO1_18170	PWY-5497	purine nucleobases degradation II (anaerobic)
RO1_19340	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RO1_19410	PWY-5101	L-isoleucine biosynthesis II
RO1_19410	PWY-5103	L-isoleucine biosynthesis III
RO1_19410	PWY-5104	L-isoleucine biosynthesis IV
RO1_19410	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RO1_19430	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RO1_19430	PWY-6855	chitin degradation I (archaea)
RO1_19430	PWY-6906	chitin derivatives degradation
RO1_19460	PWY-3801	sucrose degradation II (sucrose synthase)
RO1_19460	PWY-5054	sorbitol biosynthesis I
RO1_19460	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
RO1_19460	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RO1_19460	PWY-5659	GDP-mannose biosynthesis
RO1_19460	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RO1_19460	PWY-621	sucrose degradation III (sucrose invertase)
RO1_19460	PWY-622	starch biosynthesis
RO1_19460	PWY-6531	mannitol cycle
RO1_19460	PWY-6981	chitin biosynthesis
RO1_19460	PWY-7238	sucrose biosynthesis II
RO1_19460	PWY-7347	sucrose biosynthesis III
RO1_19460	PWY-7385	1,3-propanediol biosynthesis (engineered)
RO1_19880	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RO1_19880	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
RO1_19910	PWY-5757	fosfomycin biosynthesis
RO1_19910	PWY-6322	phosphinothricin tripeptide biosynthesis
RO1_19910	PWY-6682	dehydrophos biosynthesis
RO1_19910	PWY-6839	2-aminoethylphosphonate biosynthesis
RO1_19910	PWY-7419	FR-900098 and FR-33289 antibiotics biosynthesis
RO1_19910	PWY-7510	rhizocticin A and B biosynthesis
RO1_20320	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
RO1_20550	PWY-7205	CMP phosphorylation
RO1_20720	PWY-6788	cellulose degradation II (fungi)
RO1_20930	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
RO1_20930	PWY-5739	GDP-D-perosamine biosynthesis
RO1_20930	PWY-5740	GDP-L-colitose biosynthesis
RO1_20930	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
RO1_20950	PWY-5659	GDP-mannose biosynthesis
RO1_20950	PWY-6073	alginate biosynthesis I (algal)
RO1_20950	PWY-6082	alginate biosynthesis II (bacterial)
RO1_20950	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
RO1_20990	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
RO1_21040	PWY-6655	xanthan biosynthesis
RO1_21040	PWY-6658	acetan biosynthesis
RO1_21160	PWY-7560	methylerythritol phosphate pathway II
RO1_21240	PWY-3341	L-proline biosynthesis III
RO1_21240	PWY-4981	L-proline biosynthesis II (from arginine)
RO1_21240	PWY-6344	L-ornithine degradation II (Stickland reaction)
RO1_21540	PWY-5941	glycogen degradation II (eukaryotic)
RO1_21540	PWY-622	starch biosynthesis
RO1_21540	PWY-6731	starch degradation III
RO1_21540	PWY-6737	starch degradation V
RO1_21540	PWY-7238	sucrose biosynthesis II
RO1_21630	PWY-7533	gliotoxin biosynthesis
RO1_21800	PWY-5686	UMP biosynthesis
RO1_22020	PWY-6807	xyloglucan degradation II (exoglucanase)
RO1_22090	PWY-6807	xyloglucan degradation II (exoglucanase)
RO1_22110	PWY-6807	xyloglucan degradation II (exoglucanase)
RO1_22250	PWY-6527	stachyose degradation
RO1_22410	PWY-7560	methylerythritol phosphate pathway II
RO1_22440	PWY-6936	seleno-amino acid biosynthesis
RO1_22440	PWY-7274	D-cycloserine biosynthesis
RO1_22500	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
RO1_22640	PWY-6123	inosine-5'-phosphate biosynthesis I
RO1_22640	PWY-6124	inosine-5'-phosphate biosynthesis II
RO1_22640	PWY-7234	inosine-5'-phosphate biosynthesis III
RO1_22650	PWY-6123	inosine-5'-phosphate biosynthesis I
RO1_22650	PWY-6124	inosine-5'-phosphate biosynthesis II
RO1_22650	PWY-7234	inosine-5'-phosphate biosynthesis III
RO1_22690	PWY-5482	pyruvate fermentation to acetate II
RO1_22690	PWY-5485	pyruvate fermentation to acetate IV
RO1_22690	PWY-5497	purine nucleobases degradation II (anaerobic)
RO1_22890	PWY-6829	tRNA methylation (yeast)
RO1_22890	PWY-7285	methylwyosine biosynthesis
RO1_22890	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
RO1_22920	PWY-5097	L-lysine biosynthesis VI
RO1_22970	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RO1_22970	PWY-6153	autoinducer AI-2 biosynthesis I
RO1_22970	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
RO1_22980	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RO1_22980	PWY-6153	autoinducer AI-2 biosynthesis I
RO1_22980	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
RO1_23260	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RO1_23460	PWY-5667	CDP-diacylglycerol biosynthesis I
RO1_23460	PWY-5981	CDP-diacylglycerol biosynthesis III
RO1_24580	PWY-6654	phosphopantothenate biosynthesis III
RO1_24600	PWY-5155	&beta;-alanine biosynthesis III
RO1_24860	PWY-381	nitrate reduction II (assimilatory)
RO1_24860	PWY-5675	nitrate reduction V (assimilatory)
RO1_24860	PWY-6549	L-glutamine biosynthesis III
RO1_24860	PWY-6963	ammonia assimilation cycle I
RO1_24860	PWY-6964	ammonia assimilation cycle II
RO1_24870	PWY-1042	glycolysis IV (plant cytosol)
RO1_24870	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RO1_24870	PWY-5484	glycolysis II (from fructose 6-phosphate)
RO1_24870	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RO1_24870	PWY-7385	1,3-propanediol biosynthesis (engineered)
RO1_24880	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RO1_24880	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RO1_24880	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
RO1_24920	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RO1_24920	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RO1_24970	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
RO1_24970	PWY-7177	UTP and CTP dephosphorylation II
RO1_24970	PWY-7185	UTP and CTP dephosphorylation I
RO1_25070	PWY-5941	glycogen degradation II (eukaryotic)
RO1_25070	PWY-6724	starch degradation II
RO1_25070	PWY-6737	starch degradation V
RO1_25070	PWY-7238	sucrose biosynthesis II
RO1_25150	PWY-5941	glycogen degradation II (eukaryotic)
RO1_25150	PWY-6724	starch degradation II
RO1_25150	PWY-6737	starch degradation V
RO1_25150	PWY-7238	sucrose biosynthesis II
RO1_25680	PWY-842	starch degradation I
RO1_25700	PWY-1042	glycolysis IV (plant cytosol)
RO1_25700	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RO1_25700	PWY-5484	glycolysis II (from fructose 6-phosphate)
RO1_25700	PWY-7385	1,3-propanediol biosynthesis (engineered)
RO1_25890	PWY-7310	D-glucosaminate degradation
RO1_26120	PWY-6349	CDP-archaeol biosynthesis
RO1_26250	PWY-2301	<i>myo</i>-inositol biosynthesis
RO1_26250	PWY-4702	phytate degradation I
RO1_26250	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
RO1_26290	PWY-6807	xyloglucan degradation II (exoglucanase)
RO1_26360	PWY-6788	cellulose degradation II (fungi)
RO1_26480	PWY-6807	xyloglucan degradation II (exoglucanase)
RO1_26510	PWY-3821	galactose degradation III
RO1_26510	PWY-6317	galactose degradation I (Leloir pathway)
RO1_26510	PWY-6527	stachyose degradation
RO1_26520	PWY-6317	galactose degradation I (Leloir pathway)
RO1_26520	PWY-6527	stachyose degradation
RO1_27040	PWY-6832	2-aminoethylphosphonate degradation II
RO1_27110	PWY-2161	folate polyglutamylation
RO1_27160	PWY-1042	glycolysis IV (plant cytosol)
RO1_27160	PWY-1622	formaldehyde assimilation I (serine pathway)
RO1_27160	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RO1_27160	PWY-5484	glycolysis II (from fructose 6-phosphate)
RO1_27160	PWY-5723	Rubisco shunt
RO1_27160	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RO1_27160	PWY-6886	1-butanol autotrophic biosynthesis
RO1_27160	PWY-6901	superpathway of glucose and xylose degradation
RO1_27160	PWY-7003	glycerol degradation to butanol
RO1_27160	PWY-7124	ethylene biosynthesis V (engineered)
RO1_27160	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RO1_27260	PWY-4261	glycerol degradation I
RO1_27270	PWY-5694	allantoin degradation to glyoxylate I
RO1_27270	PWY-5705	allantoin degradation to glyoxylate III
RO1_27430	PWY-1042	glycolysis IV (plant cytosol)
RO1_27430	PWY-5484	glycolysis II (from fructose 6-phosphate)
RO1_27430	PWY-6901	superpathway of glucose and xylose degradation
RO1_27430	PWY-7003	glycerol degradation to butanol
RO1_27440	PWY-1042	glycolysis IV (plant cytosol)
RO1_27440	PWY-5484	glycolysis II (from fructose 6-phosphate)
RO1_27440	PWY-6886	1-butanol autotrophic biosynthesis
RO1_27440	PWY-6901	superpathway of glucose and xylose degradation
RO1_27440	PWY-7003	glycerol degradation to butanol
RO1_27450	PWY-1042	glycolysis IV (plant cytosol)
RO1_27450	PWY-5484	glycolysis II (from fructose 6-phosphate)
RO1_27450	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RO1_27450	PWY-7003	glycerol degradation to butanol
RO1_27480	PWY-1042	glycolysis IV (plant cytosol)
RO1_27480	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RO1_27480	PWY-5484	glycolysis II (from fructose 6-phosphate)
RO1_27480	PWY-5723	Rubisco shunt
RO1_27480	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RO1_27480	PWY-6886	1-butanol autotrophic biosynthesis
RO1_27480	PWY-6901	superpathway of glucose and xylose degradation
RO1_27480	PWY-7003	glycerol degradation to butanol
RO1_27480	PWY-7124	ethylene biosynthesis V (engineered)
RO1_27480	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RO1_27500	PWY-6123	inosine-5'-phosphate biosynthesis I
RO1_27500	PWY-6124	inosine-5'-phosphate biosynthesis II
RO1_27500	PWY-7234	inosine-5'-phosphate biosynthesis III
RO1_27510	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RO1_27510	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RO1_27510	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RO1_27510	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RO1_27520	PWY-6123	inosine-5'-phosphate biosynthesis I
RO1_27520	PWY-6124	inosine-5'-phosphate biosynthesis II
RO1_27520	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RO1_27520	PWY-7234	inosine-5'-phosphate biosynthesis III
RO1_27570	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RO1_27570	PWY-5723	Rubisco shunt
RO1_27580	PWY-6891	thiazole biosynthesis II (Bacillus)
RO1_27580	PWY-6892	thiazole biosynthesis I (E. coli)
RO1_27580	PWY-7560	methylerythritol phosphate pathway II
RO1_27610	PWY-2723	trehalose degradation V
RO1_27610	PWY-6317	galactose degradation I (Leloir pathway)
RO1_27610	PWY-6737	starch degradation V
RO1_28130	PWY-6807	xyloglucan degradation II (exoglucanase)
RO1_28140	PWY-6807	xyloglucan degradation II (exoglucanase)
RO1_28480	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RO1_28480	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RO1_30270	PWY-6825	phosphatidylcholine biosynthesis V
RO1_30980	PWY-5169	cyanurate degradation
RO1_30980	PWY-5703	urea degradation I
RO1_30990	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RO1_31190	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
RO1_31240	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
RO1_31250	PWY-621	sucrose degradation III (sucrose invertase)
RO1_31280	PWY-6527	stachyose degradation
RO1_31390	PWY-2723	trehalose degradation V
RO1_31390	PWY-6317	galactose degradation I (Leloir pathway)
RO1_31390	PWY-6737	starch degradation V
RO1_31420	PWY-7183	pyrimidine nucleobases salvage I
RO1_31430	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RO1_31510	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RO1_31530	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RO1_31620	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
RO1_31620	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
RO1_31630	PWY-7310	D-glucosaminate degradation
RO1_31700	PWY-5381	pyridine nucleotide cycling (plants)
RO1_31700	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RO1_31700	PWY-6596	adenosine nucleotides degradation I
RO1_31700	PWY-6606	guanosine nucleotides degradation II
RO1_31700	PWY-6607	guanosine nucleotides degradation I
RO1_31700	PWY-6608	guanosine nucleotides degradation III
RO1_31700	PWY-7185	UTP and CTP dephosphorylation I
RO1_31890	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
RO1_31890	PWY-622	starch biosynthesis
RO1_32160	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RO1_32160	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
RO1_32160	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RO1_32160	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RO1_32190	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RO1_32190	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
RO1_32190	PWY-6164	3-dehydroquinate biosynthesis I
RO1_32910	PWY-4981	L-proline biosynthesis II (from arginine)
RO1_32910	PWY-4984	urea cycle
RO1_32910	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RO1_32930	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RO1_32930	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
RO1_32950	PWY-3961	phosphopantothenate biosynthesis II
RO1_33720	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RO1_33720	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RO1_33880	PWY-5269	cardiolipin biosynthesis II
RO1_33880	PWY-5668	cardiolipin biosynthesis I
RO1_34360	PWY-6167	flavin biosynthesis II (archaea)
RO1_34450	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RO1_34450	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RO1_34450	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RO1_34450	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RO1_34450	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RO1_34450	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RO1_34450	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RO1_34450	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RO1_34690	PWY-6749	CMP-legionaminate biosynthesis I
RO1_34750	PWY-3221	dTDP-L-rhamnose biosynthesis II
RO1_34750	PWY-6808	dTDP-D-forosamine biosynthesis
RO1_34750	PWY-6942	dTDP-D-desosamine biosynthesis
RO1_34750	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RO1_34750	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
RO1_34750	PWY-6974	dTDP-L-olivose biosynthesis
RO1_34750	PWY-6976	dTDP-L-mycarose biosynthesis
RO1_34750	PWY-7104	dTDP-L-megosamine biosynthesis
RO1_34750	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
RO1_34750	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
RO1_34750	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
RO1_34750	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
RO1_34750	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
RO1_34750	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
RO1_34750	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
RO1_34750	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
RO1_34760	PWY-3221	dTDP-L-rhamnose biosynthesis II
RO1_34760	PWY-6808	dTDP-D-forosamine biosynthesis
RO1_34760	PWY-6942	dTDP-D-desosamine biosynthesis
RO1_34760	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RO1_34760	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
RO1_34760	PWY-6974	dTDP-L-olivose biosynthesis
RO1_34760	PWY-6976	dTDP-L-mycarose biosynthesis
RO1_34760	PWY-7104	dTDP-L-megosamine biosynthesis
RO1_34760	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
RO1_34760	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
RO1_34760	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
RO1_34760	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
RO1_34760	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
RO1_34760	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
RO1_34760	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
RO1_34760	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
RO1_35420	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RO1_35420	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
RO1_36030	PWY-6807	xyloglucan degradation II (exoglucanase)
RO1_36100	PWY-7205	CMP phosphorylation
RO1_36140	PWY-5344	L-homocysteine biosynthesis
RO1_36140	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RO1_36490	PWY-1042	glycolysis IV (plant cytosol)
RO1_36490	PWY-1622	formaldehyde assimilation I (serine pathway)
RO1_36490	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RO1_36490	PWY-5484	glycolysis II (from fructose 6-phosphate)
RO1_36490	PWY-5723	Rubisco shunt
RO1_36490	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RO1_36490	PWY-6886	1-butanol autotrophic biosynthesis
RO1_36490	PWY-6901	superpathway of glucose and xylose degradation
RO1_36490	PWY-7003	glycerol degradation to butanol
RO1_36490	PWY-7124	ethylene biosynthesis V (engineered)
RO1_36490	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RO1_36530	PWY-7205	CMP phosphorylation
RO1_36720	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RO1_36720	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RO1_36730	PWY-622	starch biosynthesis
RO1_36740	PWY-622	starch biosynthesis
RO1_36810	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RO1_36830	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RO1_36830	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RO1_36870	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RO1_36870	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
RO1_37000	PWY-6749	CMP-legionaminate biosynthesis I
RO1_37200	PWY-5278	sulfite oxidation III
RO1_37200	PWY-5340	sulfate activation for sulfonation
RO1_37200	PWY-6683	sulfate reduction III (assimilatory)
RO1_37200	PWY-6932	selenate reduction
RO1_37210	PWY-5278	sulfite oxidation III
RO1_37210	PWY-5340	sulfate activation for sulfonation
RO1_37210	PWY-6683	sulfate reduction III (assimilatory)
RO1_37210	PWY-6932	selenate reduction
RO1_38100	PWY-5480	pyruvate fermentation to ethanol I
RO1_38100	PWY-5485	pyruvate fermentation to acetate IV
RO1_38100	PWY-5493	reductive monocarboxylic acid cycle
RO1_38160	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RO1_38160	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RO1_38170	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RO1_38170	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RO1_38180	PWY-5667	CDP-diacylglycerol biosynthesis I
RO1_38180	PWY-5981	CDP-diacylglycerol biosynthesis III
RO1_38180	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
RO1_38180	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
RO1_38260	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RO1_38260	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
RO1_38260	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RO1_38260	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RO1_38400	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RO1_38450	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RO1_38470	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RO1_38470	PWY-6416	quinate degradation II
RO1_38470	PWY-6707	gallate biosynthesis
RO1_38530	PWY-3461	L-tyrosine biosynthesis II
RO1_38530	PWY-3462	L-phenylalanine biosynthesis II
RO1_38530	PWY-6120	L-tyrosine biosynthesis III
RO1_38530	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RO1_38530	PWY-6627	salinosporamide A biosynthesis
RO1_38600	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
RO1_38600	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RO1_38810	PWY-7560	methylerythritol phosphate pathway II
RO1_39010	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RO1_39080	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RO1_39080	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RO1_39080	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RO1_39340	PWY-5686	UMP biosynthesis
RO1_39460	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RO1_39460	PWY-5723	Rubisco shunt
RO1_39470	PWY-6898	thiamin salvage III
RO1_39470	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RO1_39470	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RO1_39640	PWY-6807	xyloglucan degradation II (exoglucanase)
RO1_39820	PWY-5381	pyridine nucleotide cycling (plants)
RO1_40000	PWY-6936	seleno-amino acid biosynthesis
RO1_41050	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RO1_41120	PWY-7456	mannan degradation
RO1_41420	PWY-6902	chitin degradation II
RO1_41480	PWY-2723	trehalose degradation V
RO1_41480	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RO1_41480	PWY-5661	GDP-glucose biosynthesis
RO1_41480	PWY-7238	sucrose biosynthesis II
RO1_41480	PWY-7385	1,3-propanediol biosynthesis (engineered)
RO1_41520	PWY-5194	siroheme biosynthesis
RO1_41520	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RO1_41650	PWY-7205	CMP phosphorylation
RO1_41700	PWY-6683	sulfate reduction III (assimilatory)
RO1_41790	PWY-723	alkylnitronates degradation
RO1_41800	PWY-4381	fatty acid biosynthesis initiation I
RO1_41800	PWY-6799	fatty acid biosynthesis (plant mitochondria)
RO1_41800	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RO1_41810	PWY-5367	petroselinate biosynthesis
RO1_41810	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RO1_41810	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RO1_41810	PWY-5989	stearate biosynthesis II (bacteria and plants)
RO1_41810	PWY-5994	palmitate biosynthesis I (animals and fungi)
RO1_41810	PWY-6113	superpathway of mycolate biosynthesis
RO1_41810	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RO1_41810	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RO1_41810	PWY-6951	RO1_41810|RO1_41810|YP_007780131.1|GeneID:15182343
RO1_41810	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
RO1_41810	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RO1_41810	PWYG-321	mycolate biosynthesis
RO1_41840	PWY-4381	fatty acid biosynthesis initiation I
RO1_41840	PWY-5743	3-hydroxypropanoate cycle
RO1_41840	PWY-5744	glyoxylate assimilation
RO1_41840	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RO1_41840	PWY-6679	jadomycin biosynthesis
RO1_41840	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RO1_41850	PWY-4381	fatty acid biosynthesis initiation I
RO1_41870	PWY-5481	pyruvate fermentation to lactate
RO1_41870	PWY-6901	superpathway of glucose and xylose degradation
RO1_42230	PWY-6871	3-methylbutanol biosynthesis
RO1_42280	PWY-6823	molybdenum cofactor biosynthesis
RO1_42280	PWY-6891	thiazole biosynthesis II (Bacillus)
RO1_42280	PWY-6892	thiazole biosynthesis I (E. coli)
RO1_42280	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RO1_42300	PWY-5344	L-homocysteine biosynthesis
RO1_42300	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RO1_42310	PWY-6936	seleno-amino acid biosynthesis
RO1_42400	PWY-6167	flavin biosynthesis II (archaea)
RO1_42400	PWY-6168	flavin biosynthesis III (fungi)
RO1_42400	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RO1_42410	PWY-6167	flavin biosynthesis II (archaea)
RO1_42410	PWY-6168	flavin biosynthesis III (fungi)
RO1_42530	PWY-6823	molybdenum cofactor biosynthesis
RO1_42530	PWY-6891	thiazole biosynthesis II (Bacillus)
RO1_42530	PWY-6892	thiazole biosynthesis I (E. coli)
RO1_42530	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RO1_42540	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
RO1_42580	PWY-6823	molybdenum cofactor biosynthesis
