Rxyl_0012	PWY-3781	aerobic respiration I (cytochrome c)
Rxyl_0012	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Rxyl_0012	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Rxyl_0012	PWY-5690	TCA cycle II (plants and fungi)
Rxyl_0012	PWY-6728	methylaspartate cycle
Rxyl_0012	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Rxyl_0012	PWY-7254	TCA cycle VII (acetate-producers)
Rxyl_0012	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Rxyl_0030	PWY-6840	homoglutathione biosynthesis
Rxyl_0030	PWY-7255	ergothioneine biosynthesis I (bacteria)
Rxyl_0048	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Rxyl_0048	PWY-5723	Rubisco shunt
Rxyl_0049	PWY-6891	thiazole biosynthesis II (Bacillus)
Rxyl_0049	PWY-6892	thiazole biosynthesis I (E. coli)
Rxyl_0049	PWY-7560	methylerythritol phosphate pathway II
Rxyl_0051	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Rxyl_0053	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Rxyl_0053	PWY-6855	chitin degradation I (archaea)
Rxyl_0053	PWY-6906	chitin derivatives degradation
Rxyl_0056	PWY-3162	L-tryptophan degradation V (side chain pathway)
Rxyl_0056	PWY-5057	L-valine degradation II
Rxyl_0056	PWY-5076	L-leucine degradation III
Rxyl_0056	PWY-5078	L-isoleucine degradation II
Rxyl_0056	PWY-5079	L-phenylalanine degradation III
Rxyl_0056	PWY-5082	L-methionine degradation III
Rxyl_0056	PWY-5480	pyruvate fermentation to ethanol I
Rxyl_0056	PWY-5486	pyruvate fermentation to ethanol II
Rxyl_0056	PWY-5751	phenylethanol biosynthesis
Rxyl_0056	PWY-6028	acetoin degradation
Rxyl_0056	PWY-6313	serotonin degradation
Rxyl_0056	PWY-6333	acetaldehyde biosynthesis I
Rxyl_0056	PWY-6342	noradrenaline and adrenaline degradation
Rxyl_0056	PWY-6587	pyruvate fermentation to ethanol III
Rxyl_0056	PWY-6802	salidroside biosynthesis
Rxyl_0056	PWY-6871	3-methylbutanol biosynthesis
Rxyl_0056	PWY-7013	L-1,2-propanediol degradation
Rxyl_0056	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Rxyl_0056	PWY-7118	chitin degradation to ethanol
Rxyl_0056	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Rxyl_0056	PWY-7557	dehydrodiconiferyl alcohol degradation
Rxyl_0058	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Rxyl_0058	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Rxyl_0075	PWY-2941	L-lysine biosynthesis II
Rxyl_0075	PWY-2942	L-lysine biosynthesis III
Rxyl_0075	PWY-5097	L-lysine biosynthesis VI
Rxyl_0079	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Rxyl_0079	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Rxyl_0079	PWY-7242	D-fructuronate degradation
Rxyl_0079	PWY-7310	D-glucosaminate degradation
Rxyl_0082	PWY-5303	thiosulfate oxidation II (via tetrathionate)
Rxyl_0083	PWY-6523	nitrite-dependent anaerobic methane oxidation
Rxyl_0083	PWY-6748	nitrate reduction VII (denitrification)
Rxyl_0083	PWY-7084	nitrifier denitrification
Rxyl_0095	PWY-2941	L-lysine biosynthesis II
Rxyl_0095	PWY-5097	L-lysine biosynthesis VI
Rxyl_0096	PWY-2941	L-lysine biosynthesis II
Rxyl_0096	PWY-2942	L-lysine biosynthesis III
Rxyl_0096	PWY-5097	L-lysine biosynthesis VI
Rxyl_0097	PWY-2941	L-lysine biosynthesis II
Rxyl_0097	PWY-2942	L-lysine biosynthesis III
Rxyl_0097	PWY-5097	L-lysine biosynthesis VI
Rxyl_0098	PWY-2941	L-lysine biosynthesis II
Rxyl_0098	PWY-2942	L-lysine biosynthesis III
Rxyl_0098	PWY-5097	L-lysine biosynthesis VI
Rxyl_0098	PWY-6559	spermidine biosynthesis II
Rxyl_0098	PWY-6562	norspermidine biosynthesis
Rxyl_0098	PWY-7153	grixazone biosynthesis
Rxyl_0105	PWY-5316	nicotine biosynthesis
Rxyl_0105	PWY-7342	superpathway of nicotine biosynthesis
Rxyl_0106	PWY-5316	nicotine biosynthesis
Rxyl_0106	PWY-5381	pyridine nucleotide cycling (plants)
Rxyl_0106	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Rxyl_0106	PWY-7342	superpathway of nicotine biosynthesis
Rxyl_0109	PWY-6823	molybdenum cofactor biosynthesis
Rxyl_0109	PWY-6891	thiazole biosynthesis II (Bacillus)
Rxyl_0109	PWY-6892	thiazole biosynthesis I (E. coli)
Rxyl_0109	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Rxyl_0166	PWY-6823	molybdenum cofactor biosynthesis
Rxyl_0166	PWY-6891	thiazole biosynthesis II (Bacillus)
Rxyl_0166	PWY-6892	thiazole biosynthesis I (E. coli)
Rxyl_0166	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Rxyl_0182	PWY-5659	GDP-mannose biosynthesis
Rxyl_0182	PWY-6073	alginate biosynthesis I (algal)
Rxyl_0182	PWY-6082	alginate biosynthesis II (bacterial)
Rxyl_0182	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Rxyl_0199	PWY-5419	catechol degradation to 2-oxopent-4-enoate II
Rxyl_0199	PWY-5641	2-nitrotoluene degradation
Rxyl_0212	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Rxyl_0212	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Rxyl_0212	PWY-6268	adenosylcobalamin salvage from cobalamin
Rxyl_0212	PWY-6269	adenosylcobalamin salvage from cobinamide II
Rxyl_0228	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Rxyl_0236	PWY-4381	fatty acid biosynthesis initiation I
Rxyl_0236	PWY-5743	3-hydroxypropanoate cycle
Rxyl_0236	PWY-5744	glyoxylate assimilation
Rxyl_0236	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Rxyl_0236	PWY-6679	jadomycin biosynthesis
Rxyl_0236	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Rxyl_0238	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Rxyl_0251	PWY-5941	glycogen degradation II (eukaryotic)
Rxyl_0251	PWY-6724	starch degradation II
Rxyl_0251	PWY-6737	starch degradation V
Rxyl_0251	PWY-7238	sucrose biosynthesis II
Rxyl_0253	PWY-6123	inosine-5'-phosphate biosynthesis I
Rxyl_0253	PWY-7234	inosine-5'-phosphate biosynthesis III
Rxyl_0272	PWY-6826	phosphatidylcholine biosynthesis VI
Rxyl_0288	PWY-5669	phosphatidylethanolamine biosynthesis I
Rxyl_0289	PWY-5669	phosphatidylethanolamine biosynthesis I
Rxyl_0295	PWY-4041	&gamma;-glutamyl cycle
Rxyl_0295	PWY-5826	hypoglycin biosynthesis
Rxyl_0301	PWY-5941	glycogen degradation II (eukaryotic)
Rxyl_0301	PWY-622	starch biosynthesis
Rxyl_0301	PWY-6731	starch degradation III
Rxyl_0301	PWY-6737	starch degradation V
Rxyl_0301	PWY-7238	sucrose biosynthesis II
Rxyl_0315	PWY-2622	trehalose biosynthesis IV
Rxyl_0316	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Rxyl_0316	PWY-622	starch biosynthesis
Rxyl_0318	PWY-2661	trehalose biosynthesis V
Rxyl_0319	PWY-2661	trehalose biosynthesis V
Rxyl_0321	PWY-5839	menaquinol-7 biosynthesis
Rxyl_0321	PWY-5844	menaquinol-9 biosynthesis
Rxyl_0321	PWY-5849	menaquinol-6 biosynthesis
Rxyl_0321	PWY-5890	menaquinol-10 biosynthesis
Rxyl_0321	PWY-5891	menaquinol-11 biosynthesis
Rxyl_0321	PWY-5892	menaquinol-12 biosynthesis
Rxyl_0321	PWY-5895	menaquinol-13 biosynthesis
Rxyl_0352	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Rxyl_0352	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Rxyl_0367	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Rxyl_0367	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Rxyl_0377	PWY-6610	adenine and adenosine salvage IV
Rxyl_0381	PWY-6167	flavin biosynthesis II (archaea)
Rxyl_0381	PWY-6168	flavin biosynthesis III (fungi)
Rxyl_0381	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Rxyl_0382	PWY-6654	phosphopantothenate biosynthesis III
Rxyl_0400	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
Rxyl_0400	PWY-6174	mevalonate pathway II (archaea)
Rxyl_0400	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
Rxyl_0400	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
Rxyl_0400	PWY-7102	bisabolene biosynthesis
Rxyl_0400	PWY-7391	isoprene biosynthesis II (engineered)
Rxyl_0400	PWY-7524	mevalonate pathway III (archaea)
Rxyl_0400	PWY-7560	methylerythritol phosphate pathway II
Rxyl_0400	PWY-922	mevalonate pathway I
Rxyl_0402	PWY-4261	glycerol degradation I
Rxyl_0412	PWY-6409	pyoverdine I biosynthesis
Rxyl_0412	PWY-6562	norspermidine biosynthesis
Rxyl_0412	PWY-761	rhizobactin 1021 biosynthesis
Rxyl_0426	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Rxyl_0426	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Rxyl_0431	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Rxyl_0431	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Rxyl_0436	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Rxyl_0436	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Rxyl_0441	PWY-5941	glycogen degradation II (eukaryotic)
Rxyl_0441	PWY-6724	starch degradation II
Rxyl_0441	PWY-6737	starch degradation V
Rxyl_0441	PWY-7238	sucrose biosynthesis II
Rxyl_0450	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Rxyl_0450	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Rxyl_0459	PWY-6167	flavin biosynthesis II (archaea)
Rxyl_0468	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Rxyl_0469	PWY-1622	formaldehyde assimilation I (serine pathway)
Rxyl_0469	PWY-181	photorespiration
Rxyl_0469	PWY-2161	folate polyglutamylation
Rxyl_0469	PWY-2201	folate transformations I
Rxyl_0469	PWY-3661	glycine betaine degradation I
Rxyl_0469	PWY-3661-1	glycine betaine degradation II (mammalian)
Rxyl_0469	PWY-3841	folate transformations II
Rxyl_0469	PWY-5497	purine nucleobases degradation II (anaerobic)
Rxyl_0490	PWY-6019	pseudouridine degradation
Rxyl_0508	PWY-7425	2-chloroacrylate degradation I
Rxyl_0524	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Rxyl_0524	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Rxyl_0537	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Rxyl_0567	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
Rxyl_0567	PWY-5739	GDP-D-perosamine biosynthesis
Rxyl_0567	PWY-5740	GDP-L-colitose biosynthesis
Rxyl_0567	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Rxyl_0568	PWY-3821	galactose degradation III
Rxyl_0568	PWY-6317	galactose degradation I (Leloir pathway)
Rxyl_0568	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Rxyl_0568	PWY-6527	stachyose degradation
Rxyl_0568	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Rxyl_0568	PWY-7344	UDP-D-galactose biosynthesis
Rxyl_0576	PWY-5028	L-histidine degradation II
Rxyl_0576	PWY-5030	L-histidine degradation III
Rxyl_0583	PWY-5028	L-histidine degradation II
Rxyl_0583	PWY-5030	L-histidine degradation III
Rxyl_0585	PWY-5028	L-histidine degradation II
Rxyl_0585	PWY-5030	L-histidine degradation III
Rxyl_0604	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Rxyl_0604	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Rxyl_0607	PWY-7181	pyrimidine deoxyribonucleosides degradation
Rxyl_0610	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Rxyl_0612	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Rxyl_0612	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Rxyl_0637	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Rxyl_0637	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Rxyl_0637	PWY-6268	adenosylcobalamin salvage from cobalamin
Rxyl_0637	PWY-6269	adenosylcobalamin salvage from cobinamide II
Rxyl_0640	PWY-5194	siroheme biosynthesis
Rxyl_0640	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Rxyl_0641	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Rxyl_0642	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Rxyl_0643	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Rxyl_0646	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Rxyl_0647	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Rxyl_0647	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Rxyl_0647	PWY-6269	adenosylcobalamin salvage from cobinamide II
Rxyl_0648	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Rxyl_0648	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Rxyl_0648	PWY-6269	adenosylcobalamin salvage from cobinamide II
Rxyl_0652	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Rxyl_0652	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Rxyl_0652	PWY-6269	adenosylcobalamin salvage from cobinamide II
Rxyl_0658	PWY-6906	chitin derivatives degradation
Rxyl_0658	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Rxyl_0658	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Rxyl_0680	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Rxyl_0680	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Rxyl_0688	PWY-2301	<i>myo</i>-inositol biosynthesis
Rxyl_0688	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
Rxyl_0688	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
Rxyl_0688	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
Rxyl_0688	PWY-6664	di-myo-inositol phosphate biosynthesis
Rxyl_0727	PWY-3461	L-tyrosine biosynthesis II
Rxyl_0727	PWY-3462	L-phenylalanine biosynthesis II
Rxyl_0727	PWY-6120	L-tyrosine biosynthesis III
Rxyl_0727	PWY-6627	salinosporamide A biosynthesis
Rxyl_0728	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Rxyl_0728	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Rxyl_0728	PWY-6164	3-dehydroquinate biosynthesis I
Rxyl_0733	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Rxyl_0733	PWY-5723	Rubisco shunt
Rxyl_0742	PWY-7533	gliotoxin biosynthesis
Rxyl_0746	PWY-6936	seleno-amino acid biosynthesis
Rxyl_0761	PWY-5958	acridone alkaloid biosynthesis
Rxyl_0761	PWY-6543	4-aminobenzoate biosynthesis
Rxyl_0761	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Rxyl_0761	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Rxyl_0761	PWY-6722	candicidin biosynthesis
Rxyl_0765	PWY-2201	folate transformations I
Rxyl_0765	PWY-3841	folate transformations II
Rxyl_0766	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Rxyl_0766	PWY-2161	folate polyglutamylation
Rxyl_0766	PWY-2201	folate transformations I
Rxyl_0766	PWY-3841	folate transformations II
Rxyl_0799	PWY-6749	CMP-legionaminate biosynthesis I
Rxyl_0801	PWY-6012	acyl carrier protein metabolism I
Rxyl_0801	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Rxyl_0802	PWY-6938	NADH repair
Rxyl_0804	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Rxyl_0816	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Rxyl_0826	PWY-1281	sulfoacetaldehyde degradation I
Rxyl_0826	PWY-5482	pyruvate fermentation to acetate II
Rxyl_0826	PWY-5485	pyruvate fermentation to acetate IV
Rxyl_0826	PWY-5497	purine nucleobases degradation II (anaerobic)
Rxyl_0826	PWY-6637	sulfolactate degradation II
Rxyl_0827	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Rxyl_0827	PWY-2201	folate transformations I
Rxyl_0827	PWY-3841	folate transformations II
Rxyl_0827	PWY-5030	L-histidine degradation III
Rxyl_0827	PWY-5497	purine nucleobases degradation II (anaerobic)
Rxyl_0827	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Rxyl_0830	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Rxyl_0833	PWY-4261	glycerol degradation I
Rxyl_0835	PWY-5101	L-isoleucine biosynthesis II
Rxyl_0835	PWY-5103	L-isoleucine biosynthesis III
Rxyl_0835	PWY-5104	L-isoleucine biosynthesis IV
Rxyl_0835	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Rxyl_0836	PWY-6832	2-aminoethylphosphonate degradation II
Rxyl_0841	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Rxyl_0841	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Rxyl_0841	PWY-6936	seleno-amino acid biosynthesis
Rxyl_0841	PWY-702	L-methionine biosynthesis II
Rxyl_0842	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Rxyl_0842	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Rxyl_0842	PWY-6936	seleno-amino acid biosynthesis
Rxyl_0842	PWY-702	L-methionine biosynthesis II
Rxyl_0843	PWY-2201	folate transformations I
Rxyl_0843	PWY-3841	folate transformations II
Rxyl_0853	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Rxyl_0853	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Rxyl_0853	PWY-5989	stearate biosynthesis II (bacteria and plants)
Rxyl_0853	PWY-6113	superpathway of mycolate biosynthesis
Rxyl_0853	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Rxyl_0853	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Rxyl_0853	PWY-7096	triclosan resistance
Rxyl_0853	PWYG-321	mycolate biosynthesis
Rxyl_0856	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Rxyl_0856	PWY-7118	chitin degradation to ethanol
Rxyl_0893	PWY-7560	methylerythritol phosphate pathway II
Rxyl_0894	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Rxyl_0912	PWY-1042	glycolysis IV (plant cytosol)
Rxyl_0912	PWY-1622	formaldehyde assimilation I (serine pathway)
Rxyl_0912	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Rxyl_0912	PWY-5484	glycolysis II (from fructose 6-phosphate)
Rxyl_0912	PWY-5723	Rubisco shunt
Rxyl_0912	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Rxyl_0912	PWY-6886	1-butanol autotrophic biosynthesis
Rxyl_0912	PWY-6901	superpathway of glucose and xylose degradation
Rxyl_0912	PWY-7003	glycerol degradation to butanol
Rxyl_0912	PWY-7124	ethylene biosynthesis V (engineered)
Rxyl_0912	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Rxyl_0913	PWY-1042	glycolysis IV (plant cytosol)
Rxyl_0913	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Rxyl_0913	PWY-5484	glycolysis II (from fructose 6-phosphate)
Rxyl_0913	PWY-5723	Rubisco shunt
Rxyl_0913	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Rxyl_0913	PWY-6886	1-butanol autotrophic biosynthesis
Rxyl_0913	PWY-6901	superpathway of glucose and xylose degradation
Rxyl_0913	PWY-7003	glycerol degradation to butanol
Rxyl_0913	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Rxyl_0913	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Rxyl_0923	PWY-6832	2-aminoethylphosphonate degradation II
Rxyl_0933	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Rxyl_0933	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Rxyl_0933	PWY-6936	seleno-amino acid biosynthesis
Rxyl_0933	PWY-702	L-methionine biosynthesis II
Rxyl_0958	PWY-5198	factor 420 biosynthesis
Rxyl_0959	PWY-5198	factor 420 biosynthesis
Rxyl_0960	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Rxyl_0960	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Rxyl_0960	PWY-6164	3-dehydroquinate biosynthesis I
Rxyl_0961	PWY-5199	factor 420 polyglutamylation
Rxyl_0963	PWY-6683	sulfate reduction III (assimilatory)
Rxyl_0966	PWY-5278	sulfite oxidation III
Rxyl_0966	PWY-5340	sulfate activation for sulfonation
Rxyl_0966	PWY-6683	sulfate reduction III (assimilatory)
Rxyl_0966	PWY-6932	selenate reduction
Rxyl_0967	PWY-5340	sulfate activation for sulfonation
Rxyl_0969	PWY-5386	methylglyoxal degradation I
Rxyl_0973	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Rxyl_0973	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Rxyl_0975	PWY-5198	factor 420 biosynthesis
Rxyl_0976	PWY-5350	thiosulfate disproportionation III (rhodanese)
Rxyl_0979	PWY-4983	L-citrulline-nitric oxide cycle
Rxyl_0979	PWY-4984	urea cycle
Rxyl_0979	PWY-5	canavanine biosynthesis
Rxyl_0979	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Rxyl_0979	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Rxyl_0990	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Rxyl_0991	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Rxyl_0991	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Rxyl_0991	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Rxyl_0992	PWY-6123	inosine-5'-phosphate biosynthesis I
Rxyl_0992	PWY-6124	inosine-5'-phosphate biosynthesis II
Rxyl_0992	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Rxyl_0992	PWY-7234	inosine-5'-phosphate biosynthesis III
Rxyl_0993	PWY-6123	inosine-5'-phosphate biosynthesis I
Rxyl_0993	PWY-6124	inosine-5'-phosphate biosynthesis II
Rxyl_0993	PWY-7234	inosine-5'-phosphate biosynthesis III
Rxyl_0994	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Rxyl_0994	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Rxyl_0994	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Rxyl_0995	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Rxyl_0995	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Rxyl_0995	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Rxyl_0996	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Rxyl_0996	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Rxyl_0996	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Rxyl_0997	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Rxyl_0997	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Rxyl_0997	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Rxyl_0997	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Rxyl_0998	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Rxyl_0998	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Rxyl_0998	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Rxyl_0999	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Rxyl_0999	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Rxyl_1000	PWY-6123	inosine-5'-phosphate biosynthesis I
Rxyl_1000	PWY-6124	inosine-5'-phosphate biosynthesis II
Rxyl_1000	PWY-7234	inosine-5'-phosphate biosynthesis III
Rxyl_1019	PWY-6823	molybdenum cofactor biosynthesis
Rxyl_1031	PWY-381	nitrate reduction II (assimilatory)
Rxyl_1031	PWY-5675	nitrate reduction V (assimilatory)
Rxyl_1031	PWY-6549	L-glutamine biosynthesis III
Rxyl_1031	PWY-6963	ammonia assimilation cycle I
Rxyl_1031	PWY-6964	ammonia assimilation cycle II
Rxyl_1034	PWY-5451	acetone degradation I (to methylglyoxal)
Rxyl_1034	PWY-6588	pyruvate fermentation to acetone
Rxyl_1034	PWY-6876	isopropanol biosynthesis
Rxyl_1034	PWY-7466	acetone degradation III (to propane-1,2-diol)
Rxyl_1050	PWY-6785	hydrogen production VIII
Rxyl_1056	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Rxyl_1056	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Rxyl_1061	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Rxyl_1063	PWY-4261	glycerol degradation I
Rxyl_1069	PWY-4261	glycerol degradation I
Rxyl_1069	PWY-6118	glycerol-3-phosphate shuttle
Rxyl_1069	PWY-6952	glycerophosphodiester degradation
Rxyl_1084	PWY-5135	xanthohumol biosynthesis
Rxyl_1084	PWY-6316	aromatic polyketides biosynthesis
Rxyl_1084	PWY-6787	flavonoid biosynthesis (in equisetum)
Rxyl_1084	PWY-7397	naringenin biosynthesis (engineered)
Rxyl_1086	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Rxyl_1089	PWY-5344	L-homocysteine biosynthesis
Rxyl_1090	PWY-2941	L-lysine biosynthesis II
Rxyl_1090	PWY-2942	L-lysine biosynthesis III
Rxyl_1090	PWY-5097	L-lysine biosynthesis VI
Rxyl_1090	PWY-6559	spermidine biosynthesis II
Rxyl_1090	PWY-6562	norspermidine biosynthesis
Rxyl_1090	PWY-7153	grixazone biosynthesis
Rxyl_1092	PWY-2941	L-lysine biosynthesis II
Rxyl_1092	PWY-2942	L-lysine biosynthesis III
Rxyl_1092	PWY-5097	L-lysine biosynthesis VI
Rxyl_1092	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Rxyl_1092	PWY-6559	spermidine biosynthesis II
Rxyl_1092	PWY-6562	norspermidine biosynthesis
Rxyl_1092	PWY-7153	grixazone biosynthesis
Rxyl_1092	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Rxyl_1124	PWY-5988	wound-induced proteolysis I
Rxyl_1124	PWY-6018	seed germination protein turnover
Rxyl_1125	PWY-381	nitrate reduction II (assimilatory)
Rxyl_1125	PWY-5675	nitrate reduction V (assimilatory)
Rxyl_1125	PWY-6549	L-glutamine biosynthesis III
Rxyl_1125	PWY-6963	ammonia assimilation cycle I
Rxyl_1125	PWY-6964	ammonia assimilation cycle II
Rxyl_1127	PWY-6840	homoglutathione biosynthesis
Rxyl_1127	PWY-7255	ergothioneine biosynthesis I (bacteria)
Rxyl_1130	PWY-5796	malonate decarboxylase activation
Rxyl_1131	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Rxyl_1134	PWY-6749	CMP-legionaminate biosynthesis I
Rxyl_1171	PWY-5663	tetrahydrobiopterin biosynthesis I
Rxyl_1171	PWY-5664	tetrahydrobiopterin biosynthesis II
Rxyl_1171	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Rxyl_1171	PWY-6703	preQ<sub>0</sub> biosynthesis
Rxyl_1171	PWY-6983	tetrahydrobiopterin biosynthesis III
Rxyl_1171	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Rxyl_1184	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Rxyl_1184	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Rxyl_1213	PWY-2301	<i>myo</i>-inositol biosynthesis
Rxyl_1213	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
Rxyl_1213	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
Rxyl_1213	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
Rxyl_1213	PWY-6664	di-myo-inositol phosphate biosynthesis
Rxyl_1218	PWY-5269	cardiolipin biosynthesis II
Rxyl_1218	PWY-5668	cardiolipin biosynthesis I
Rxyl_1236	PWY-3821	galactose degradation III
Rxyl_1236	PWY-6317	galactose degradation I (Leloir pathway)
Rxyl_1236	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Rxyl_1236	PWY-6527	stachyose degradation
Rxyl_1236	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Rxyl_1236	PWY-7344	UDP-D-galactose biosynthesis
Rxyl_1244	PWY-3461	L-tyrosine biosynthesis II
Rxyl_1244	PWY-3462	L-phenylalanine biosynthesis II
Rxyl_1244	PWY-6120	L-tyrosine biosynthesis III
Rxyl_1244	PWY-6627	salinosporamide A biosynthesis
Rxyl_1244	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Rxyl_1267	PWY-5381	pyridine nucleotide cycling (plants)
Rxyl_1269	PWY-4041	&gamma;-glutamyl cycle
Rxyl_1269	PWY-5826	hypoglycin biosynthesis
Rxyl_1270	PWY-31	canavanine degradation
Rxyl_1270	PWY-4984	urea cycle
Rxyl_1270	PWY-6305	putrescine biosynthesis IV
Rxyl_1270	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Rxyl_1275	PWY-5392	reductive TCA cycle II
Rxyl_1275	PWY-5537	pyruvate fermentation to acetate V
Rxyl_1275	PWY-5538	pyruvate fermentation to acetate VI
Rxyl_1275	PWY-5690	TCA cycle II (plants and fungi)
Rxyl_1275	PWY-5913	TCA cycle VI (obligate autotrophs)
Rxyl_1275	PWY-6728	methylaspartate cycle
Rxyl_1275	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Rxyl_1275	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Rxyl_1276	PWY-5392	reductive TCA cycle II
Rxyl_1276	PWY-5537	pyruvate fermentation to acetate V
Rxyl_1276	PWY-5538	pyruvate fermentation to acetate VI
Rxyl_1276	PWY-5690	TCA cycle II (plants and fungi)
Rxyl_1276	PWY-5913	TCA cycle VI (obligate autotrophs)
Rxyl_1276	PWY-6728	methylaspartate cycle
Rxyl_1276	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Rxyl_1276	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Rxyl_1282	PWY-5743	3-hydroxypropanoate cycle
Rxyl_1282	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Rxyl_1282	PWY-6728	methylaspartate cycle
Rxyl_1282	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Rxyl_1283	PWY-5743	3-hydroxypropanoate cycle
Rxyl_1283	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Rxyl_1283	PWY-6728	methylaspartate cycle
Rxyl_1283	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Rxyl_1290	PWY-1622	formaldehyde assimilation I (serine pathway)
Rxyl_1290	PWY-5392	reductive TCA cycle II
Rxyl_1290	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Rxyl_1290	PWY-5690	TCA cycle II (plants and fungi)
Rxyl_1290	PWY-5913	TCA cycle VI (obligate autotrophs)
Rxyl_1290	PWY-6728	methylaspartate cycle
Rxyl_1290	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Rxyl_1290	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Rxyl_1290	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Rxyl_1316	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
Rxyl_1317	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
Rxyl_1326	PWY-5101	L-isoleucine biosynthesis II
Rxyl_1326	PWY-5103	L-isoleucine biosynthesis III
Rxyl_1326	PWY-5104	L-isoleucine biosynthesis IV
Rxyl_1326	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Rxyl_1327	PWY-5386	methylglyoxal degradation I
Rxyl_1329	PWY-6700	queuosine biosynthesis
Rxyl_1330	PWY-6700	queuosine biosynthesis
Rxyl_1350	PWY-6840	homoglutathione biosynthesis
Rxyl_1350	PWY-7255	ergothioneine biosynthesis I (bacteria)
Rxyl_1353	PWY-6823	molybdenum cofactor biosynthesis
Rxyl_1353	PWY-6891	thiazole biosynthesis II (Bacillus)
Rxyl_1353	PWY-6892	thiazole biosynthesis I (E. coli)
Rxyl_1353	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Rxyl_1362	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Rxyl_1363	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Rxyl_1363	PWY-5723	Rubisco shunt
Rxyl_1365	PWY-6167	flavin biosynthesis II (archaea)
Rxyl_1365	PWY-6168	flavin biosynthesis III (fungi)
Rxyl_1365	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Rxyl_1366	PWY-6167	flavin biosynthesis II (archaea)
Rxyl_1366	PWY-6168	flavin biosynthesis III (fungi)
Rxyl_1366	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Rxyl_1367	PWY-6167	flavin biosynthesis II (archaea)
Rxyl_1367	PWY-6168	flavin biosynthesis III (fungi)
Rxyl_1378	PWY-4381	fatty acid biosynthesis initiation I
Rxyl_1380	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Rxyl_1380	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Rxyl_1380	PWY-5989	stearate biosynthesis II (bacteria and plants)
Rxyl_1380	PWY-5994	palmitate biosynthesis I (animals and fungi)
Rxyl_1380	PWY-6113	superpathway of mycolate biosynthesis
Rxyl_1380	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Rxyl_1380	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Rxyl_1380	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Rxyl_1380	PWYG-321	mycolate biosynthesis
Rxyl_1381	PWY-5367	petroselinate biosynthesis
Rxyl_1381	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Rxyl_1381	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Rxyl_1381	PWY-5989	stearate biosynthesis II (bacteria and plants)
Rxyl_1381	PWY-5994	palmitate biosynthesis I (animals and fungi)
Rxyl_1381	PWY-6113	superpathway of mycolate biosynthesis
Rxyl_1381	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Rxyl_1381	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Rxyl_1381	PWY-6951	Rxyl_1381
Rxyl_1381	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Rxyl_1381	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Rxyl_1381	PWYG-321	mycolate biosynthesis
Rxyl_1391	PWY-6829	tRNA methylation (yeast)
Rxyl_1391	PWY-7285	methylwyosine biosynthesis
Rxyl_1391	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Rxyl_1404	PWY-7560	methylerythritol phosphate pathway II
Rxyl_1406	PWY-7560	methylerythritol phosphate pathway II
Rxyl_1416	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Rxyl_1416	PWY-6167	flavin biosynthesis II (archaea)
Rxyl_1416	PWY-6168	flavin biosynthesis III (fungi)
Rxyl_1428	PWY-2781	<i>cis</i>-zeatin biosynthesis
Rxyl_1432	PWY-6605	adenine and adenosine salvage II
Rxyl_1432	PWY-6610	adenine and adenosine salvage IV
Rxyl_1436	PWY-6749	CMP-legionaminate biosynthesis I
Rxyl_1437	PWY-5269	cardiolipin biosynthesis II
Rxyl_1437	PWY-5668	cardiolipin biosynthesis I
Rxyl_1440	PWY-7205	CMP phosphorylation
Rxyl_1441	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Rxyl_1448	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Rxyl_1448	PWY-7177	UTP and CTP dephosphorylation II
Rxyl_1448	PWY-7185	UTP and CTP dephosphorylation I
Rxyl_1452	PWY-6898	thiamin salvage III
Rxyl_1452	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Rxyl_1452	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Rxyl_1454	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Rxyl_1454	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Rxyl_1454	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Rxyl_1459	PWY-6164	3-dehydroquinate biosynthesis I
Rxyl_1460	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Rxyl_1461	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Rxyl_1470	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Rxyl_1470	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Rxyl_1473	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Rxyl_1477	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Rxyl_1477	PWY-5686	UMP biosynthesis
Rxyl_1477	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Rxyl_1478	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Rxyl_1478	PWY-5686	UMP biosynthesis
Rxyl_1478	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Rxyl_1479	PWY-5686	UMP biosynthesis
Rxyl_1480	PWY-5686	UMP biosynthesis
Rxyl_1481	PWY-7183	pyrimidine nucleobases salvage I
Rxyl_1485	PWY-3341	L-proline biosynthesis III
Rxyl_1485	PWY-4981	L-proline biosynthesis II (from arginine)
Rxyl_1485	PWY-6344	L-ornithine degradation II (Stickland reaction)
Rxyl_1487	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Rxyl_1492	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Rxyl_1492	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Rxyl_1493	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Rxyl_1493	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Rxyl_1493	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Rxyl_1493	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Rxyl_1495	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Rxyl_1495	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Rxyl_1496	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Rxyl_1496	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Rxyl_1496	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Rxyl_1497	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Rxyl_1497	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Rxyl_1505	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Rxyl_1507	PWY-6556	pyrimidine ribonucleosides salvage II
Rxyl_1507	PWY-7181	pyrimidine deoxyribonucleosides degradation
Rxyl_1507	PWY-7193	pyrimidine ribonucleosides salvage I
Rxyl_1507	PWY-7199	pyrimidine deoxyribonucleosides salvage
Rxyl_1508	PWY-7039	phosphatidate metabolism, as a signaling molecule
Rxyl_1522	PWY-5381	pyridine nucleotide cycling (plants)
Rxyl_1522	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Rxyl_1532	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Rxyl_1532	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Rxyl_1532	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Rxyl_1532	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Rxyl_1532	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Rxyl_1532	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Rxyl_1532	PWY-7205	CMP phosphorylation
Rxyl_1532	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Rxyl_1532	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Rxyl_1532	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Rxyl_1532	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Rxyl_1532	PWY-7224	purine deoxyribonucleosides salvage
Rxyl_1532	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Rxyl_1532	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Rxyl_1534	PWY-2161	folate polyglutamylation
Rxyl_1545	PWY-2301	<i>myo</i>-inositol biosynthesis
Rxyl_1545	PWY-4702	phytate degradation I
Rxyl_1545	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Rxyl_1564	PWY-6215	4-chlorobenzoate degradation
Rxyl_1566	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Rxyl_1566	PWY-2201	folate transformations I
Rxyl_1566	PWY-3841	folate transformations II
Rxyl_1566	PWY-5030	L-histidine degradation III
Rxyl_1566	PWY-5497	purine nucleobases degradation II (anaerobic)
Rxyl_1566	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Rxyl_1567	PWY-5030	L-histidine degradation III
Rxyl_1567	PWY-5497	purine nucleobases degradation II (anaerobic)
Rxyl_1568	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Rxyl_1568	PWY-2161	folate polyglutamylation
Rxyl_1568	PWY-2201	folate transformations I
Rxyl_1568	PWY-3841	folate transformations II
Rxyl_1576	PWY-2201	folate transformations I
Rxyl_1576	PWY-3841	folate transformations II
Rxyl_1578	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Rxyl_1579	PWY-6123	inosine-5'-phosphate biosynthesis I
Rxyl_1579	PWY-6124	inosine-5'-phosphate biosynthesis II
Rxyl_1579	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Rxyl_1579	PWY-7234	inosine-5'-phosphate biosynthesis III
Rxyl_1586	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Rxyl_1586	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Rxyl_1586	PWY-6936	seleno-amino acid biosynthesis
Rxyl_1586	PWY-702	L-methionine biosynthesis II
Rxyl_1588	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Rxyl_1588	PWY-6416	quinate degradation II
Rxyl_1588	PWY-6707	gallate biosynthesis
Rxyl_1602	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Rxyl_1602	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Rxyl_1619	PWY-5350	thiosulfate disproportionation III (rhodanese)
Rxyl_1636	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Rxyl_1636	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Rxyl_1638	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Rxyl_1640	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Rxyl_1647	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Rxyl_1648	PWY-7183	pyrimidine nucleobases salvage I
Rxyl_1649	PWY-1622	formaldehyde assimilation I (serine pathway)
Rxyl_1649	PWY-181	photorespiration
Rxyl_1649	PWY-2161	folate polyglutamylation
Rxyl_1649	PWY-2201	folate transformations I
Rxyl_1649	PWY-3661	glycine betaine degradation I
Rxyl_1649	PWY-3661-1	glycine betaine degradation II (mammalian)
Rxyl_1649	PWY-3841	folate transformations II
Rxyl_1649	PWY-5497	purine nucleobases degradation II (anaerobic)
Rxyl_1655	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Rxyl_1656	PWY-5484	glycolysis II (from fructose 6-phosphate)
Rxyl_1673	PWY-7425	2-chloroacrylate degradation I
Rxyl_1675	PWY-4261	glycerol degradation I
Rxyl_1689	PWY-3941	&beta;-alanine biosynthesis II
Rxyl_1689	PWY-5104	L-isoleucine biosynthesis IV
Rxyl_1689	PWY-5747	2-methylcitrate cycle II
Rxyl_1701	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Rxyl_1703	PWY-4381	fatty acid biosynthesis initiation I
Rxyl_1703	PWY-5743	3-hydroxypropanoate cycle
Rxyl_1703	PWY-5744	glyoxylate assimilation
Rxyl_1703	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Rxyl_1703	PWY-6679	jadomycin biosynthesis
Rxyl_1703	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Rxyl_1716	PWY-5642	2,4-dinitrotoluene degradation
Rxyl_1716	PWY-6373	acrylate degradation
Rxyl_1717	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Rxyl_1723	PWY-5940	streptomycin biosynthesis
Rxyl_1723	PWY-7237	<i>myo</i>-, <i>chiro</i>- and <i>scillo</i>-inositol degradation
Rxyl_1723	PWY-7241	<I>myo</I>-inositol degradation II
Rxyl_1731	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Rxyl_1731	PWY-6855	chitin degradation I (archaea)
Rxyl_1731	PWY-6906	chitin derivatives degradation
Rxyl_1733	PWY-7310	D-glucosaminate degradation
Rxyl_1744	PWY-6610	adenine and adenosine salvage IV
Rxyl_1761	PWY-1361	benzoyl-CoA degradation I (aerobic)
Rxyl_1761	PWY-5109	2-methylbutanoate biosynthesis
Rxyl_1761	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Rxyl_1761	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Rxyl_1761	PWY-5177	glutaryl-CoA degradation
Rxyl_1761	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Rxyl_1761	PWY-6435	4-hydroxybenzoate biosynthesis V
Rxyl_1761	PWY-6583	pyruvate fermentation to butanol I
Rxyl_1761	PWY-6863	pyruvate fermentation to hexanol
Rxyl_1761	PWY-6883	pyruvate fermentation to butanol II
Rxyl_1761	PWY-6944	androstenedione degradation
Rxyl_1761	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Rxyl_1761	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Rxyl_1761	PWY-7007	methyl ketone biosynthesis
Rxyl_1761	PWY-7046	4-coumarate degradation (anaerobic)
Rxyl_1761	PWY-7094	fatty acid salvage
Rxyl_1761	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Rxyl_1761	PWY-735	jasmonic acid biosynthesis
Rxyl_1761	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Rxyl_1780	PWY-6168	flavin biosynthesis III (fungi)
Rxyl_1780	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Rxyl_1846	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Rxyl_1846	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Rxyl_1869	PWY-5743	3-hydroxypropanoate cycle
Rxyl_1869	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Rxyl_1869	PWY-6728	methylaspartate cycle
Rxyl_1869	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Rxyl_1870	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Rxyl_1870	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Rxyl_1878	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Rxyl_1949	PWY-6854	ethylene biosynthesis III (microbes)
Rxyl_1959	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Rxyl_1962	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Rxyl_1962	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Rxyl_1962	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Rxyl_1962	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Rxyl_1962	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Rxyl_1962	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Rxyl_1967	PWY-5839	menaquinol-7 biosynthesis
Rxyl_1967	PWY-5851	demethylmenaquinol-9 biosynthesis
Rxyl_1967	PWY-5852	demethylmenaquinol-8 biosynthesis I
Rxyl_1967	PWY-5853	demethylmenaquinol-6 biosynthesis I
Rxyl_1967	PWY-5890	menaquinol-10 biosynthesis
Rxyl_1967	PWY-5891	menaquinol-11 biosynthesis
Rxyl_1967	PWY-5892	menaquinol-12 biosynthesis
Rxyl_1967	PWY-5895	menaquinol-13 biosynthesis
Rxyl_1973	PWY-5839	menaquinol-7 biosynthesis
Rxyl_1973	PWY-5844	menaquinol-9 biosynthesis
Rxyl_1973	PWY-5849	menaquinol-6 biosynthesis
Rxyl_1973	PWY-5890	menaquinol-10 biosynthesis
Rxyl_1973	PWY-5891	menaquinol-11 biosynthesis
Rxyl_1973	PWY-5892	menaquinol-12 biosynthesis
Rxyl_1973	PWY-5895	menaquinol-13 biosynthesis
Rxyl_1975	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Rxyl_1976	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Rxyl_1976	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Rxyl_1977	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Rxyl_1977	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Rxyl_1977	PWY-5194	siroheme biosynthesis
Rxyl_1977	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Rxyl_1978	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Rxyl_1978	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Rxyl_1979	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Rxyl_1980	PWY-5194	siroheme biosynthesis
Rxyl_1980	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Rxyl_1998	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Rxyl_2003	PWY-1042	glycolysis IV (plant cytosol)
Rxyl_2003	PWY-5484	glycolysis II (from fructose 6-phosphate)
Rxyl_2003	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Rxyl_2003	PWY-7003	glycerol degradation to butanol
Rxyl_2004	PWY-1042	glycolysis IV (plant cytosol)
Rxyl_2004	PWY-5484	glycolysis II (from fructose 6-phosphate)
Rxyl_2004	PWY-6886	1-butanol autotrophic biosynthesis
Rxyl_2004	PWY-6901	superpathway of glucose and xylose degradation
Rxyl_2004	PWY-7003	glycerol degradation to butanol
Rxyl_2005	PWY-1042	glycolysis IV (plant cytosol)
Rxyl_2005	PWY-5484	glycolysis II (from fructose 6-phosphate)
Rxyl_2005	PWY-6901	superpathway of glucose and xylose degradation
Rxyl_2005	PWY-7003	glycerol degradation to butanol
Rxyl_2008	PWY-4061	glutathione-mediated detoxification I
Rxyl_2008	PWY-6842	glutathione-mediated detoxification II
Rxyl_2008	PWY-7112	4-hydroxy-2-nonenal detoxification
Rxyl_2008	PWY-7533	gliotoxin biosynthesis
Rxyl_2041	PWY-5750	itaconate biosynthesis
Rxyl_2041	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Rxyl_2041	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Rxyl_2043	PWY-7158	L-phenylalanine degradation V
Rxyl_2046	PWY-3121	linamarin degradation
Rxyl_2046	PWY-5176	coumarin biosynthesis (via 2-coumarate)
Rxyl_2046	PWY-6002	lotaustralin degradation
Rxyl_2046	PWY-6788	cellulose degradation II (fungi)
Rxyl_2046	PWY-7089	taxiphyllin bioactivation
Rxyl_2046	PWY-7091	linustatin bioactivation
Rxyl_2046	PWY-7092	neolinustatin bioactivation
Rxyl_2057	PWY-1361	benzoyl-CoA degradation I (aerobic)
Rxyl_2057	PWY-5109	2-methylbutanoate biosynthesis
Rxyl_2057	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Rxyl_2057	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Rxyl_2057	PWY-5177	glutaryl-CoA degradation
Rxyl_2057	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Rxyl_2057	PWY-6435	4-hydroxybenzoate biosynthesis V
Rxyl_2057	PWY-6583	pyruvate fermentation to butanol I
Rxyl_2057	PWY-6863	pyruvate fermentation to hexanol
Rxyl_2057	PWY-6883	pyruvate fermentation to butanol II
Rxyl_2057	PWY-6944	androstenedione degradation
Rxyl_2057	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Rxyl_2057	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Rxyl_2057	PWY-7007	methyl ketone biosynthesis
Rxyl_2057	PWY-7046	4-coumarate degradation (anaerobic)
Rxyl_2057	PWY-7094	fatty acid salvage
Rxyl_2057	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Rxyl_2057	PWY-735	jasmonic acid biosynthesis
Rxyl_2057	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Rxyl_2063	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Rxyl_2064	PWY-6728	methylaspartate cycle
Rxyl_2064	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Rxyl_2064	PWY-7118	chitin degradation to ethanol
Rxyl_2064	PWY-7294	xylose degradation IV
Rxyl_2064	PWY-7295	L-arabinose degradation IV
Rxyl_2082	PWY-1042	glycolysis IV (plant cytosol)
Rxyl_2082	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Rxyl_2082	PWY-5484	glycolysis II (from fructose 6-phosphate)
Rxyl_2082	PWY-7385	1,3-propanediol biosynthesis (engineered)
Rxyl_2087	PWY-4381	fatty acid biosynthesis initiation I
Rxyl_2087	PWY-5743	3-hydroxypropanoate cycle
Rxyl_2087	PWY-5744	glyoxylate assimilation
Rxyl_2087	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Rxyl_2087	PWY-6679	jadomycin biosynthesis
Rxyl_2087	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Rxyl_2088	PWY-4381	fatty acid biosynthesis initiation I
Rxyl_2088	PWY-5743	3-hydroxypropanoate cycle
Rxyl_2088	PWY-5744	glyoxylate assimilation
Rxyl_2088	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Rxyl_2088	PWY-6679	jadomycin biosynthesis
Rxyl_2088	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Rxyl_2096	PWY-5958	acridone alkaloid biosynthesis
Rxyl_2096	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Rxyl_2096	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Rxyl_2115	PWY-5958	acridone alkaloid biosynthesis
Rxyl_2115	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Rxyl_2115	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Rxyl_2119	PWY-6749	CMP-legionaminate biosynthesis I
Rxyl_2134	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Rxyl_2174	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Rxyl_2175	PWY-7560	methylerythritol phosphate pathway II
Rxyl_2176	PWY-7560	methylerythritol phosphate pathway II
Rxyl_2180	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Rxyl_2182	PWY-3961	phosphopantothenate biosynthesis II
Rxyl_2183	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Rxyl_2183	PWY-6148	tetrahydromethanopterin biosynthesis
Rxyl_2183	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Rxyl_2183	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Rxyl_2184	PWY-6614	tetrahydrofolate biosynthesis
Rxyl_2186	PWY-6599	guanine and guanosine salvage II
Rxyl_2186	PWY-6609	adenine and adenosine salvage III
Rxyl_2186	PWY-6610	adenine and adenosine salvage IV
Rxyl_2186	PWY-6620	guanine and guanosine salvage
Rxyl_2200	PWY-5386	methylglyoxal degradation I
Rxyl_2212	PWY-7560	methylerythritol phosphate pathway II
Rxyl_2245	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Rxyl_2245	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Rxyl_2272	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Rxyl_2272	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Rxyl_2289	PWY-6857	retinol biosynthesis
Rxyl_2297	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Rxyl_2297	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Rxyl_2298	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Rxyl_2298	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Rxyl_2300	PWY-5686	UMP biosynthesis
Rxyl_2302	PWY-5686	UMP biosynthesis
Rxyl_2311	PWY-5381	pyridine nucleotide cycling (plants)
Rxyl_2311	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Rxyl_2311	PWY-6596	adenosine nucleotides degradation I
Rxyl_2311	PWY-6606	guanosine nucleotides degradation II
Rxyl_2311	PWY-6607	guanosine nucleotides degradation I
Rxyl_2311	PWY-6608	guanosine nucleotides degradation III
Rxyl_2311	PWY-7185	UTP and CTP dephosphorylation I
Rxyl_2313	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
Rxyl_2313	PWY-581	indole-3-acetate biosynthesis II
Rxyl_2313	PWY-7308	acrylonitrile degradation I
Rxyl_2314	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
Rxyl_2314	PWY-581	indole-3-acetate biosynthesis II
Rxyl_2314	PWY-7308	acrylonitrile degradation I
Rxyl_2315	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
Rxyl_2315	PWY-581	indole-3-acetate biosynthesis II
Rxyl_2315	PWY-7308	acrylonitrile degradation I
Rxyl_2326	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Rxyl_2329	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Rxyl_2329	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Rxyl_2336	PWY-1361	benzoyl-CoA degradation I (aerobic)
Rxyl_2336	PWY-5109	2-methylbutanoate biosynthesis
Rxyl_2336	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Rxyl_2336	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Rxyl_2336	PWY-5177	glutaryl-CoA degradation
Rxyl_2336	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Rxyl_2336	PWY-6435	4-hydroxybenzoate biosynthesis V
Rxyl_2336	PWY-6583	pyruvate fermentation to butanol I
Rxyl_2336	PWY-6863	pyruvate fermentation to hexanol
Rxyl_2336	PWY-6883	pyruvate fermentation to butanol II
Rxyl_2336	PWY-6944	androstenedione degradation
Rxyl_2336	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Rxyl_2336	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Rxyl_2336	PWY-7007	methyl ketone biosynthesis
Rxyl_2336	PWY-7046	4-coumarate degradation (anaerobic)
Rxyl_2336	PWY-7094	fatty acid salvage
Rxyl_2336	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Rxyl_2336	PWY-735	jasmonic acid biosynthesis
Rxyl_2336	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Rxyl_2345	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Rxyl_2352	PWY-5350	thiosulfate disproportionation III (rhodanese)
Rxyl_2353	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Rxyl_2353	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Rxyl_2353	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Rxyl_2353	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Rxyl_2355	PWY-5340	sulfate activation for sulfonation
Rxyl_2364	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Rxyl_2364	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Rxyl_2372	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Rxyl_2372	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Rxyl_2375	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Rxyl_2375	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Rxyl_2395	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Rxyl_2395	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Rxyl_2395	PWY-6897	thiamin salvage II
Rxyl_2395	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Rxyl_2395	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Rxyl_2395	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Rxyl_2395	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Rxyl_2396	PWY-6891	thiazole biosynthesis II (Bacillus)
Rxyl_2396	PWY-6892	thiazole biosynthesis I (E. coli)
Rxyl_2400	PWY-5747	2-methylcitrate cycle II
Rxyl_2406	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Rxyl_2406	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Rxyl_2406	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Rxyl_2407	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Rxyl_2407	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Rxyl_2432	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Rxyl_2453	PWY-1361	benzoyl-CoA degradation I (aerobic)
Rxyl_2453	PWY-5109	2-methylbutanoate biosynthesis
Rxyl_2453	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Rxyl_2453	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Rxyl_2453	PWY-5177	glutaryl-CoA degradation
Rxyl_2453	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Rxyl_2453	PWY-6435	4-hydroxybenzoate biosynthesis V
Rxyl_2453	PWY-6583	pyruvate fermentation to butanol I
Rxyl_2453	PWY-6863	pyruvate fermentation to hexanol
Rxyl_2453	PWY-6883	pyruvate fermentation to butanol II
Rxyl_2453	PWY-6944	androstenedione degradation
Rxyl_2453	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Rxyl_2453	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Rxyl_2453	PWY-7007	methyl ketone biosynthesis
Rxyl_2453	PWY-7046	4-coumarate degradation (anaerobic)
Rxyl_2453	PWY-7094	fatty acid salvage
Rxyl_2453	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Rxyl_2453	PWY-735	jasmonic acid biosynthesis
Rxyl_2453	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Rxyl_2466	PWY-4381	fatty acid biosynthesis initiation I
Rxyl_2466	PWY-5743	3-hydroxypropanoate cycle
Rxyl_2466	PWY-5744	glyoxylate assimilation
Rxyl_2466	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Rxyl_2466	PWY-6679	jadomycin biosynthesis
Rxyl_2466	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Rxyl_2481	PWY-5743	3-hydroxypropanoate cycle
Rxyl_2481	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Rxyl_2481	PWY-6728	methylaspartate cycle
Rxyl_2481	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Rxyl_2495	PWY-3661	glycine betaine degradation I
Rxyl_2495	PWY-4722	creatinine degradation II
Rxyl_2498	PWY-381	nitrate reduction II (assimilatory)
Rxyl_2498	PWY-5675	nitrate reduction V (assimilatory)
Rxyl_2498	PWY-6549	L-glutamine biosynthesis III
Rxyl_2498	PWY-6963	ammonia assimilation cycle I
Rxyl_2498	PWY-6964	ammonia assimilation cycle II
Rxyl_2517	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Rxyl_2517	PWY-2201	folate transformations I
Rxyl_2517	PWY-3841	folate transformations II
Rxyl_2517	PWY-5030	L-histidine degradation III
Rxyl_2517	PWY-5497	purine nucleobases degradation II (anaerobic)
Rxyl_2517	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Rxyl_2518	PWY-5030	L-histidine degradation III
Rxyl_2518	PWY-5497	purine nucleobases degradation II (anaerobic)
Rxyl_2519	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Rxyl_2519	PWY-2161	folate polyglutamylation
Rxyl_2519	PWY-2201	folate transformations I
Rxyl_2519	PWY-3841	folate transformations II
Rxyl_2529	PWY-5022	4-aminobutanoate degradation V
Rxyl_2529	PWY-6728	methylaspartate cycle
Rxyl_2529	PWY-7126	ethylene biosynthesis IV
Rxyl_2534	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Rxyl_2535	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Rxyl_2541	PWY-1042	glycolysis IV (plant cytosol)
Rxyl_2541	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Rxyl_2541	PWY-5484	glycolysis II (from fructose 6-phosphate)
Rxyl_2541	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Rxyl_2541	PWY-7385	1,3-propanediol biosynthesis (engineered)
Rxyl_2544	PWY-5392	reductive TCA cycle II
Rxyl_2544	PWY-5537	pyruvate fermentation to acetate V
Rxyl_2544	PWY-5538	pyruvate fermentation to acetate VI
Rxyl_2544	PWY-5690	TCA cycle II (plants and fungi)
Rxyl_2544	PWY-5913	TCA cycle VI (obligate autotrophs)
Rxyl_2544	PWY-6728	methylaspartate cycle
Rxyl_2544	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Rxyl_2544	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Rxyl_2547	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Rxyl_2547	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Rxyl_2548	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Rxyl_2548	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Rxyl_2548	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Rxyl_2549	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Rxyl_2549	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Rxyl_2553	PWY-6823	molybdenum cofactor biosynthesis
Rxyl_2579	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Rxyl_2579	PWY-6148	tetrahydromethanopterin biosynthesis
Rxyl_2579	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Rxyl_2579	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Rxyl_2588	PWY-1042	glycolysis IV (plant cytosol)
Rxyl_2588	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Rxyl_2588	PWY-5484	glycolysis II (from fructose 6-phosphate)
Rxyl_2588	PWY-7385	1,3-propanediol biosynthesis (engineered)
Rxyl_2593	PWY-5663	tetrahydrobiopterin biosynthesis I
Rxyl_2593	PWY-5664	tetrahydrobiopterin biosynthesis II
Rxyl_2593	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Rxyl_2593	PWY-6703	preQ<sub>0</sub> biosynthesis
Rxyl_2593	PWY-6983	tetrahydrobiopterin biosynthesis III
Rxyl_2593	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Rxyl_2595	PWY-3861	mannitol degradation II
Rxyl_2595	PWY-3881	mannitol biosynthesis
Rxyl_2595	PWY-5659	GDP-mannose biosynthesis
Rxyl_2595	PWY-7456	mannan degradation
Rxyl_2595	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Rxyl_2609	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Rxyl_2609	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Rxyl_2617	PWY-6700	queuosine biosynthesis
Rxyl_2622	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Rxyl_2622	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Rxyl_2622	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Rxyl_2622	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Rxyl_2626	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Rxyl_2633	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Rxyl_2643	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Rxyl_2643	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Rxyl_2646	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Rxyl_2646	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Rxyl_2677	PWY-3801	sucrose degradation II (sucrose synthase)
Rxyl_2677	PWY-5054	sorbitol biosynthesis I
Rxyl_2677	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Rxyl_2677	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Rxyl_2677	PWY-5659	GDP-mannose biosynthesis
Rxyl_2677	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Rxyl_2677	PWY-621	sucrose degradation III (sucrose invertase)
Rxyl_2677	PWY-622	starch biosynthesis
Rxyl_2677	PWY-6531	mannitol cycle
Rxyl_2677	PWY-6981	chitin biosynthesis
Rxyl_2677	PWY-7238	sucrose biosynthesis II
Rxyl_2677	PWY-7347	sucrose biosynthesis III
Rxyl_2677	PWY-7385	1,3-propanediol biosynthesis (engineered)
Rxyl_2706	PWY-2582	brassinosteroid biosynthesis II
Rxyl_2706	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Rxyl_2706	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Rxyl_2706	PWY-6948	sitosterol degradation to androstenedione
Rxyl_2706	PWY-699	brassinosteroid biosynthesis I
Rxyl_2706	PWY-7299	progesterone biosynthesis
Rxyl_2720	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Rxyl_2720	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Rxyl_2763	PWY-5381	pyridine nucleotide cycling (plants)
Rxyl_2763	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Rxyl_2784	PWY-6899	base-degraded thiamin salvage
Rxyl_2784	PWY-7356	thiamin salvage IV (yeast)
Rxyl_2786	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Rxyl_2786	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Rxyl_2786	PWY-6896	thiamin salvage I
Rxyl_2786	PWY-6897	thiamin salvage II
Rxyl_2788	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Rxyl_2788	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Rxyl_2788	PWY-6897	thiamin salvage II
Rxyl_2788	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Rxyl_2788	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Rxyl_2788	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Rxyl_2788	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Rxyl_2790	PWY-6897	thiamin salvage II
Rxyl_2790	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Rxyl_2790	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Rxyl_2791	PWY-6910	hydroxymethylpyrimidine salvage
Rxyl_2791	PWY-7356	thiamin salvage IV (yeast)
Rxyl_2791	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Rxyl_2802	PWY-5350	thiosulfate disproportionation III (rhodanese)
Rxyl_2807	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Rxyl_2807	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Rxyl_2828	PWY-7199	pyrimidine deoxyribonucleosides salvage
Rxyl_2832	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Rxyl_2832	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Rxyl_2833	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Rxyl_2833	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Rxyl_2835	PWY-6599	guanine and guanosine salvage II
Rxyl_2835	PWY-6609	adenine and adenosine salvage III
Rxyl_2835	PWY-6610	adenine and adenosine salvage IV
Rxyl_2835	PWY-6620	guanine and guanosine salvage
Rxyl_2839	PWY-5497	purine nucleobases degradation II (anaerobic)
Rxyl_2839	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Rxyl_2839	PWY-6538	caffeine degradation III (bacteria, via demethylation)
Rxyl_2839	PWY-6596	adenosine nucleotides degradation I
Rxyl_2839	PWY-6606	guanosine nucleotides degradation II
Rxyl_2839	PWY-6607	guanosine nucleotides degradation I
Rxyl_2839	PWY-6608	guanosine nucleotides degradation III
Rxyl_2839	PWY-6999	theophylline degradation
Rxyl_2841	PWY-5691	urate degradation to allantoin I
Rxyl_2841	PWY-7394	urate degradation to allantoin II
Rxyl_2843	PWY-5691	urate degradation to allantoin I
Rxyl_2844	PWY-5691	urate degradation to allantoin I
Rxyl_2844	PWY-7394	urate degradation to allantoin II
Rxyl_2845	PWY-5686	UMP biosynthesis
Rxyl_2845	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
Rxyl_2845	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
Rxyl_2847	PWY-5686	UMP biosynthesis
Rxyl_2856	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Rxyl_2866	PWY-5392	reductive TCA cycle II
Rxyl_2866	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Rxyl_2866	PWY-5690	TCA cycle II (plants and fungi)
Rxyl_2866	PWY-5913	TCA cycle VI (obligate autotrophs)
Rxyl_2866	PWY-6728	methylaspartate cycle
Rxyl_2866	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Rxyl_2866	PWY-7254	TCA cycle VII (acetate-producers)
Rxyl_2866	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Rxyl_2874	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Rxyl_2874	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Rxyl_2874	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Rxyl_2874	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Rxyl_2874	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Rxyl_2874	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Rxyl_2874	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Rxyl_2874	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Rxyl_2882	PWY-4983	L-citrulline-nitric oxide cycle
Rxyl_2882	PWY-4984	urea cycle
Rxyl_2882	PWY-5	canavanine biosynthesis
Rxyl_2882	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Rxyl_2882	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Rxyl_2885	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Rxyl_2885	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Rxyl_2886	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Rxyl_2887	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Rxyl_2887	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Rxyl_2889	PWY-4981	L-proline biosynthesis II (from arginine)
Rxyl_2889	PWY-4984	urea cycle
Rxyl_2889	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Rxyl_2891	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Rxyl_2891	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Rxyl_2893	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Rxyl_2893	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Rxyl_2894	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Rxyl_2894	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Rxyl_2896	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Rxyl_2896	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Rxyl_2897	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Rxyl_2897	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Rxyl_2897	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Rxyl_2897	PWY-5958	acridone alkaloid biosynthesis
Rxyl_2897	PWY-6406	salicylate biosynthesis I
Rxyl_2897	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Rxyl_2897	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Rxyl_2898	PWY-4261	glycerol degradation I
Rxyl_2907	PWY-40	putrescine biosynthesis I
Rxyl_2907	PWY-6305	putrescine biosynthesis IV
Rxyl_2920	PWY-6854	ethylene biosynthesis III (microbes)
Rxyl_2922	PWY-6853	ethylene biosynthesis II (microbes)
Rxyl_2923	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Rxyl_2923	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Rxyl_2941	PWY-5350	thiosulfate disproportionation III (rhodanese)
Rxyl_2948	PWY-1042	glycolysis IV (plant cytosol)
Rxyl_2948	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Rxyl_2948	PWY-5484	glycolysis II (from fructose 6-phosphate)
Rxyl_2948	PWY-5723	Rubisco shunt
Rxyl_2948	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Rxyl_2948	PWY-6886	1-butanol autotrophic biosynthesis
Rxyl_2948	PWY-6901	superpathway of glucose and xylose degradation
Rxyl_2948	PWY-7003	glycerol degradation to butanol
Rxyl_2948	PWY-7124	ethylene biosynthesis V (engineered)
Rxyl_2948	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Rxyl_2952	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Rxyl_2952	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Rxyl_2986	PWY-6823	molybdenum cofactor biosynthesis
Rxyl_2991	PWY-6654	phosphopantothenate biosynthesis III
Rxyl_3030	PWY-4261	glycerol degradation I
Rxyl_3038	PWY-6167	flavin biosynthesis II (archaea)
Rxyl_3062	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Rxyl_3062	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Rxyl_3066	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Rxyl_3066	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Rxyl_3073	PWY-5484	glycolysis II (from fructose 6-phosphate)
Rxyl_3079	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Rxyl_3079	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Rxyl_3087	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Rxyl_3087	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Rxyl_3091	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Rxyl_3091	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Rxyl_3091	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Rxyl_3115	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Rxyl_3121	PWY-3221	dTDP-L-rhamnose biosynthesis II
Rxyl_3121	PWY-6808	dTDP-D-forosamine biosynthesis
Rxyl_3121	PWY-6942	dTDP-D-desosamine biosynthesis
Rxyl_3121	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Rxyl_3121	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Rxyl_3121	PWY-6974	dTDP-L-olivose biosynthesis
Rxyl_3121	PWY-6976	dTDP-L-mycarose biosynthesis
Rxyl_3121	PWY-7104	dTDP-L-megosamine biosynthesis
Rxyl_3121	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Rxyl_3121	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Rxyl_3121	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Rxyl_3121	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Rxyl_3121	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Rxyl_3121	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Rxyl_3121	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Rxyl_3121	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Rxyl_3122	PWY-3221	dTDP-L-rhamnose biosynthesis II
Rxyl_3122	PWY-6808	dTDP-D-forosamine biosynthesis
Rxyl_3122	PWY-6942	dTDP-D-desosamine biosynthesis
Rxyl_3122	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Rxyl_3122	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Rxyl_3122	PWY-6974	dTDP-L-olivose biosynthesis
Rxyl_3122	PWY-6976	dTDP-L-mycarose biosynthesis
Rxyl_3122	PWY-7104	dTDP-L-megosamine biosynthesis
Rxyl_3122	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Rxyl_3122	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Rxyl_3122	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Rxyl_3122	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Rxyl_3122	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Rxyl_3122	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Rxyl_3122	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Rxyl_3122	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Rxyl_3124	PWY-702	L-methionine biosynthesis II
Rxyl_3125	PWY-5101	L-isoleucine biosynthesis II
Rxyl_3125	PWY-5103	L-isoleucine biosynthesis III
Rxyl_3125	PWY-5104	L-isoleucine biosynthesis IV
Rxyl_3125	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Rxyl_3125	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Rxyl_3125	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Rxyl_3125	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Rxyl_3127	PWY-5101	L-isoleucine biosynthesis II
Rxyl_3127	PWY-5103	L-isoleucine biosynthesis III
Rxyl_3127	PWY-5104	L-isoleucine biosynthesis IV
Rxyl_3127	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Rxyl_3128	PWY-5057	L-valine degradation II
Rxyl_3128	PWY-5076	L-leucine degradation III
Rxyl_3128	PWY-5078	L-isoleucine degradation II
Rxyl_3128	PWY-5101	L-isoleucine biosynthesis II
Rxyl_3128	PWY-5103	L-isoleucine biosynthesis III
Rxyl_3128	PWY-5104	L-isoleucine biosynthesis IV
Rxyl_3128	PWY-5108	L-isoleucine biosynthesis V
Rxyl_3129	PWY-6871	3-methylbutanol biosynthesis
Rxyl_3130	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Rxyl_3131	PWY-5101	L-isoleucine biosynthesis II
Rxyl_3131	PWY-6871	3-methylbutanol biosynthesis
Rxyl_3150	PWY-6167	flavin biosynthesis II (archaea)
Rxyl_3153	PWY-3162	L-tryptophan degradation V (side chain pathway)
Rxyl_3153	PWY-5057	L-valine degradation II
Rxyl_3153	PWY-5076	L-leucine degradation III
Rxyl_3153	PWY-5078	L-isoleucine degradation II
Rxyl_3153	PWY-5079	L-phenylalanine degradation III
Rxyl_3153	PWY-5082	L-methionine degradation III
Rxyl_3153	PWY-5480	pyruvate fermentation to ethanol I
Rxyl_3153	PWY-5486	pyruvate fermentation to ethanol II
Rxyl_3153	PWY-5751	phenylethanol biosynthesis
Rxyl_3153	PWY-6028	acetoin degradation
Rxyl_3153	PWY-6313	serotonin degradation
Rxyl_3153	PWY-6333	acetaldehyde biosynthesis I
Rxyl_3153	PWY-6342	noradrenaline and adrenaline degradation
Rxyl_3153	PWY-6587	pyruvate fermentation to ethanol III
Rxyl_3153	PWY-6802	salidroside biosynthesis
Rxyl_3153	PWY-6871	3-methylbutanol biosynthesis
Rxyl_3153	PWY-7013	L-1,2-propanediol degradation
Rxyl_3153	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Rxyl_3153	PWY-7118	chitin degradation to ethanol
Rxyl_3153	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Rxyl_3153	PWY-7557	dehydrodiconiferyl alcohol degradation
Rxyl_3196	PWY-381	nitrate reduction II (assimilatory)
Rxyl_3196	PWY-5675	nitrate reduction V (assimilatory)
Rxyl_3196	PWY-6549	L-glutamine biosynthesis III
Rxyl_3196	PWY-6963	ammonia assimilation cycle I
Rxyl_3196	PWY-6964	ammonia assimilation cycle II