Sde_0025	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Sde_0025	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Sde_0026	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Sde_0037	PWY-3781	aerobic respiration I (cytochrome c)
Sde_0037	PWY-4521	arsenite oxidation I (respiratory)
Sde_0037	PWY-6692	Fe(II) oxidation
Sde_0037	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Sde_0051	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Sde_0052	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Sde_0052	PWY-3162	L-tryptophan degradation V (side chain pathway)
Sde_0052	PWY-5057	L-valine degradation II
Sde_0052	PWY-5076	L-leucine degradation III
Sde_0052	PWY-5078	L-isoleucine degradation II
Sde_0052	PWY-5079	L-phenylalanine degradation III
Sde_0052	PWY-5082	L-methionine degradation III
Sde_0052	PWY-5480	pyruvate fermentation to ethanol I
Sde_0052	PWY-5486	pyruvate fermentation to ethanol II
Sde_0052	PWY-5751	phenylethanol biosynthesis
Sde_0052	PWY-6028	acetoin degradation
Sde_0052	PWY-6313	serotonin degradation
Sde_0052	PWY-6333	acetaldehyde biosynthesis I
Sde_0052	PWY-6342	noradrenaline and adrenaline degradation
Sde_0052	PWY-6587	pyruvate fermentation to ethanol III
Sde_0052	PWY-6802	salidroside biosynthesis
Sde_0052	PWY-6871	3-methylbutanol biosynthesis
Sde_0052	PWY-7013	L-1,2-propanediol degradation
Sde_0052	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Sde_0052	PWY-7118	chitin degradation to ethanol
Sde_0052	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Sde_0052	PWY-7557	dehydrodiconiferyl alcohol degradation
Sde_0067	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Sde_0079	PWY-6012	acyl carrier protein metabolism I
Sde_0079	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Sde_0118	PWY-5674	nitrate reduction IV (dissimilatory)
Sde_0138	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Sde_0181	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Sde_0219	PWY-5704	urea degradation II
Sde_0220	PWY-5704	urea degradation II
Sde_0221	PWY-5704	urea degradation II
Sde_0237	PWY-2941	L-lysine biosynthesis II
Sde_0237	PWY-5097	L-lysine biosynthesis VI
Sde_0238	PWY-2941	L-lysine biosynthesis II
Sde_0238	PWY-2942	L-lysine biosynthesis III
Sde_0238	PWY-5097	L-lysine biosynthesis VI
Sde_0255	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Sde_0255	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Sde_0255	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Sde_0323	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Sde_0350	PWY-3841	folate transformations II
Sde_0350	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Sde_0350	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sde_0350	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Sde_0350	PWY-7199	pyrimidine deoxyribonucleosides salvage
Sde_0350	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Sde_0351	PWY-3841	folate transformations II
Sde_0351	PWY-6614	tetrahydrofolate biosynthesis
Sde_0358	PWY-5101	L-isoleucine biosynthesis II
Sde_0358	PWY-5103	L-isoleucine biosynthesis III
Sde_0358	PWY-5104	L-isoleucine biosynthesis IV
Sde_0358	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Sde_0360	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Sde_0363	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Sde_0368	PWY-6910	hydroxymethylpyrimidine salvage
Sde_0368	PWY-7356	thiamin salvage IV (yeast)
Sde_0368	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Sde_0369	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Sde_0383	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Sde_0388	PWY-5057	L-valine degradation II
Sde_0388	PWY-5076	L-leucine degradation III
Sde_0388	PWY-5078	L-isoleucine degradation II
Sde_0388	PWY-5101	L-isoleucine biosynthesis II
Sde_0388	PWY-5103	L-isoleucine biosynthesis III
Sde_0388	PWY-5104	L-isoleucine biosynthesis IV
Sde_0388	PWY-5108	L-isoleucine biosynthesis V
Sde_0417	PWY-1622	formaldehyde assimilation I (serine pathway)
Sde_0417	PWY-181	photorespiration
Sde_0417	PWY-2161	folate polyglutamylation
Sde_0417	PWY-2201	folate transformations I
Sde_0417	PWY-3661	glycine betaine degradation I
Sde_0417	PWY-3661-1	glycine betaine degradation II (mammalian)
Sde_0417	PWY-3841	folate transformations II
Sde_0417	PWY-5497	purine nucleobases degradation II (anaerobic)
Sde_0468	PWY-2201	folate transformations I
Sde_0468	PWY-3841	folate transformations II
Sde_0469	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Sde_0470	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Sde_0470	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Sde_0472	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Sde_0472	PWY-5723	Rubisco shunt
Sde_0472	PWY-6891	thiazole biosynthesis II (Bacillus)
Sde_0472	PWY-6892	thiazole biosynthesis I (E. coli)
Sde_0472	PWY-6901	superpathway of glucose and xylose degradation
Sde_0472	PWY-7560	methylerythritol phosphate pathway II
Sde_0473	PWY-1042	glycolysis IV (plant cytosol)
Sde_0473	PWY-5484	glycolysis II (from fructose 6-phosphate)
Sde_0473	PWY-6886	1-butanol autotrophic biosynthesis
Sde_0473	PWY-6901	superpathway of glucose and xylose degradation
Sde_0473	PWY-7003	glycerol degradation to butanol
Sde_0494	PWY-1042	glycolysis IV (plant cytosol)
Sde_0494	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Sde_0494	PWY-5484	glycolysis II (from fructose 6-phosphate)
Sde_0494	PWY-5723	Rubisco shunt
Sde_0494	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Sde_0494	PWY-6886	1-butanol autotrophic biosynthesis
Sde_0494	PWY-6901	superpathway of glucose and xylose degradation
Sde_0494	PWY-7003	glycerol degradation to butanol
Sde_0494	PWY-7124	ethylene biosynthesis V (engineered)
Sde_0494	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Sde_0502	PWY-381	nitrate reduction II (assimilatory)
Sde_0502	PWY-5675	nitrate reduction V (assimilatory)
Sde_0502	PWY-6549	L-glutamine biosynthesis III
Sde_0502	PWY-6963	ammonia assimilation cycle I
Sde_0502	PWY-6964	ammonia assimilation cycle II
Sde_0507	PWY-7456	mannan degradation
Sde_0508	PWY-7456	mannan degradation
Sde_0516	PWY-6745	phytochelatins biosynthesis
Sde_0518	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Sde_0518	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Sde_0558	PWY-6788	cellulose degradation II (fungi)
Sde_0563	PWY-842	starch degradation I
Sde_0573	PWY-842	starch degradation I
Sde_0600	PWY-5767	Sde_0600|Sde_0600|YP_526076.1|GeneID:3965007
Sde_0626	PWY-4381	fatty acid biosynthesis initiation I
Sde_0629	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Sde_0629	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Sde_0629	PWY-6268	adenosylcobalamin salvage from cobalamin
Sde_0629	PWY-6269	adenosylcobalamin salvage from cobinamide II
Sde_0630	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Sde_0630	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Sde_0630	PWY-6269	adenosylcobalamin salvage from cobinamide II
Sde_0631	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Sde_0631	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Sde_0631	PWY-6269	adenosylcobalamin salvage from cobinamide II
Sde_0632	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Sde_0632	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Sde_0632	PWY-6269	adenosylcobalamin salvage from cobinamide II
Sde_0636	PWY-6788	cellulose degradation II (fungi)
Sde_0638	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Sde_0638	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Sde_0638	PWY-6936	seleno-amino acid biosynthesis
Sde_0638	PWY-702	L-methionine biosynthesis II
Sde_0649	PWY-6788	cellulose degradation II (fungi)
Sde_0654	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Sde_0654	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Sde_0655	PWY-5491	diethylphosphate degradation
Sde_0669	PWY-6123	inosine-5'-phosphate biosynthesis I
Sde_0669	PWY-6124	inosine-5'-phosphate biosynthesis II
Sde_0669	PWY-7234	inosine-5'-phosphate biosynthesis III
Sde_0684	PWY-6807	xyloglucan degradation II (exoglucanase)
Sde_0687	PWY-4381	fatty acid biosynthesis initiation I
Sde_0687	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Sde_0687	PWY-723	alkylnitronates degradation
Sde_0687	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Sde_0689	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Sde_0689	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Sde_0689	PWY-5989	stearate biosynthesis II (bacteria and plants)
Sde_0689	PWY-5994	palmitate biosynthesis I (animals and fungi)
Sde_0689	PWY-6113	superpathway of mycolate biosynthesis
Sde_0689	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Sde_0689	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Sde_0689	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Sde_0689	PWYG-321	mycolate biosynthesis
Sde_0693	PWY-1042	glycolysis IV (plant cytosol)
Sde_0693	PWY-5484	glycolysis II (from fructose 6-phosphate)
Sde_0693	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Sde_0693	PWY-7003	glycerol degradation to butanol
Sde_0701	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Sde_0704	PWY-6986	alginate degradation
Sde_0707	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Sde_0723	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Sde_0723	PWY-6148	tetrahydromethanopterin biosynthesis
Sde_0723	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Sde_0723	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Sde_0724	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Sde_0724	PWY-6148	tetrahydromethanopterin biosynthesis
Sde_0724	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Sde_0724	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Sde_0734	PWY-3821	galactose degradation III
Sde_0734	PWY-6317	galactose degradation I (Leloir pathway)
Sde_0734	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Sde_0734	PWY-6527	stachyose degradation
Sde_0734	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Sde_0734	PWY-7344	UDP-D-galactose biosynthesis
Sde_0746	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Sde_0746	PWY-5723	Rubisco shunt
Sde_0747	PWY-5958	acridone alkaloid biosynthesis
Sde_0747	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Sde_0747	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Sde_0752	PWY-5958	acridone alkaloid biosynthesis
Sde_0752	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Sde_0752	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Sde_0760	PWY-4061	glutathione-mediated detoxification I
Sde_0760	PWY-6842	glutathione-mediated detoxification II
Sde_0760	PWY-7112	4-hydroxy-2-nonenal detoxification
Sde_0772	PWY-4261	glycerol degradation I
Sde_0775	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Sde_0775	PWY-5723	Rubisco shunt
Sde_0788	PWY-2723	trehalose degradation V
Sde_0788	PWY-6317	galactose degradation I (Leloir pathway)
Sde_0788	PWY-6737	starch degradation V
Sde_0805	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Sde_0805	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Sde_0805	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Sde_0806	PWY-6123	inosine-5'-phosphate biosynthesis I
Sde_0806	PWY-6124	inosine-5'-phosphate biosynthesis II
Sde_0806	PWY-7234	inosine-5'-phosphate biosynthesis III
Sde_0813	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Sde_0813	PWY-6416	quinate degradation II
Sde_0813	PWY-6707	gallate biosynthesis
Sde_0825	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Sde_0825	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Sde_0825	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Sde_0825	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Sde_0827	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Sde_0828	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Sde_0828	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Sde_0828	PWY-6897	thiamin salvage II
Sde_0828	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Sde_0828	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Sde_0828	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Sde_0828	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Sde_0830	PWY-5506	methanol oxidation to formaldehyde IV
Sde_0833	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Sde_0833	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Sde_0844	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Sde_0844	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Sde_0845	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Sde_0845	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Sde_0845	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Sde_0846	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Sde_0846	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Sde_0848	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Sde_0848	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Sde_0848	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Sde_0848	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Sde_0849	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Sde_0849	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Sde_0850	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Sde_0850	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Sde_0857	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Sde_0858	PWY-6502	oxidized GTP and dGTP detoxification
Sde_0858	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Sde_0858	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Sde_0858	PWY-6897	thiamin salvage II
Sde_0858	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Sde_0858	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Sde_0858	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Sde_0858	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Sde_0874	PWY-5316	nicotine biosynthesis
Sde_0874	PWY-5381	pyridine nucleotide cycling (plants)
Sde_0874	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Sde_0874	PWY-7342	superpathway of nicotine biosynthesis
Sde_0885	PWY-6854	ethylene biosynthesis III (microbes)
Sde_0888	PWY-5392	reductive TCA cycle II
Sde_0888	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Sde_0888	PWY-5690	TCA cycle II (plants and fungi)
Sde_0888	PWY-5913	TCA cycle VI (obligate autotrophs)
Sde_0888	PWY-6728	methylaspartate cycle
Sde_0888	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Sde_0888	PWY-7254	TCA cycle VII (acetate-producers)
Sde_0888	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Sde_0891	PWY-7158	L-phenylalanine degradation V
Sde_0893	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Sde_0893	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Sde_0894	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Sde_0894	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Sde_0894	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Sde_0899	PWY-6785	hydrogen production VIII
Sde_0900	PWY-4202	arsenate detoxification I (glutaredoxin)
Sde_0900	PWY-4621	arsenate detoxification II (glutaredoxin)
Sde_0904	PWY-5530	sorbitol biosynthesis II
Sde_0904	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Sde_0914	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Sde_0915	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Sde_0915	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Sde_0916	PWY-3961	phosphopantothenate biosynthesis II
Sde_0935	PWY-1042	glycolysis IV (plant cytosol)
Sde_0935	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Sde_0935	PWY-5484	glycolysis II (from fructose 6-phosphate)
Sde_0935	PWY-6531	mannitol cycle
Sde_0935	PWY-7385	1,3-propanediol biosynthesis (engineered)
Sde_0940	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
Sde_0940	PWY-7248	pectin degradation III
Sde_0944	PWY-1081	homogalacturonan degradation
Sde_0944	PWY-7246	pectin degradation II
Sde_0944	PWY-7248	pectin degradation III
Sde_0950	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Sde_0986	PWY-5941	glycogen degradation II (eukaryotic)
Sde_0986	PWY-6724	starch degradation II
Sde_0986	PWY-6737	starch degradation V
Sde_0986	PWY-7238	sucrose biosynthesis II
Sde_0987	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Sde_0987	PWY-622	starch biosynthesis
Sde_0989	PWY-5941	glycogen degradation II (eukaryotic)
Sde_0989	PWY-622	starch biosynthesis
Sde_0989	PWY-6731	starch degradation III
Sde_0989	PWY-6737	starch degradation V
Sde_0989	PWY-7238	sucrose biosynthesis II
Sde_0990	PWY-622	starch biosynthesis
Sde_0991	PWY-622	starch biosynthesis
Sde_0992	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Sde_0992	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Sde_0999	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Sde_0999	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Sde_0999	PWY-5989	stearate biosynthesis II (bacteria and plants)
Sde_0999	PWY-5994	palmitate biosynthesis I (animals and fungi)
Sde_0999	PWY-6113	superpathway of mycolate biosynthesis
Sde_0999	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Sde_0999	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Sde_0999	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Sde_0999	PWYG-321	mycolate biosynthesis
Sde_1000	PWY-3801	sucrose degradation II (sucrose synthase)
Sde_1000	PWY-6527	stachyose degradation
Sde_1000	PWY-6981	chitin biosynthesis
Sde_1000	PWY-7238	sucrose biosynthesis II
Sde_1000	PWY-7343	UDP-glucose biosynthesis
Sde_1001	PWY-6749	CMP-legionaminate biosynthesis I
Sde_1006	PWY-3801	sucrose degradation II (sucrose synthase)
Sde_1006	PWY-5054	sorbitol biosynthesis I
Sde_1006	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Sde_1006	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Sde_1006	PWY-5659	GDP-mannose biosynthesis
Sde_1006	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Sde_1006	PWY-621	sucrose degradation III (sucrose invertase)
Sde_1006	PWY-622	starch biosynthesis
Sde_1006	PWY-6531	mannitol cycle
Sde_1006	PWY-6981	chitin biosynthesis
Sde_1006	PWY-7238	sucrose biosynthesis II
Sde_1006	PWY-7347	sucrose biosynthesis III
Sde_1006	PWY-7385	1,3-propanediol biosynthesis (engineered)
Sde_1018	PWY-2723	trehalose degradation V
Sde_1018	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Sde_1018	PWY-5661	GDP-glucose biosynthesis
Sde_1018	PWY-7238	sucrose biosynthesis II
Sde_1018	PWY-7385	1,3-propanediol biosynthesis (engineered)
Sde_1034	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
Sde_1062	PWY-5155	&beta;-alanine biosynthesis III
Sde_1067	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Sde_1067	PWY-7118	chitin degradation to ethanol
Sde_1084	PWY-6936	seleno-amino acid biosynthesis
Sde_1084	PWY-7274	D-cycloserine biosynthesis
Sde_1097	PWY-3821	galactose degradation III
Sde_1097	PWY-6317	galactose degradation I (Leloir pathway)
Sde_1097	PWY-6527	stachyose degradation
Sde_1098	PWY-6317	galactose degradation I (Leloir pathway)
Sde_1098	PWY-6527	stachyose degradation
Sde_1107	PWY-4381	fatty acid biosynthesis initiation I
Sde_1107	PWY-5743	3-hydroxypropanoate cycle
Sde_1107	PWY-5744	glyoxylate assimilation
Sde_1107	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Sde_1107	PWY-6679	jadomycin biosynthesis
Sde_1107	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Sde_1127	PWY-5169	cyanurate degradation
Sde_1127	PWY-5703	urea degradation I
Sde_1128	PWY-5169	cyanurate degradation
Sde_1128	PWY-5703	urea degradation I
Sde_1128	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Sde_1160	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Sde_1160	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Sde_1160	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Sde_1172	PWY-6700	queuosine biosynthesis
Sde_1177	PWY-6807	xyloglucan degradation II (exoglucanase)
Sde_1187	PWY-2723	trehalose degradation V
Sde_1187	PWY-6317	galactose degradation I (Leloir pathway)
Sde_1187	PWY-6737	starch degradation V
Sde_1190	PWY-6409	pyoverdine I biosynthesis
Sde_1190	PWY-6562	norspermidine biosynthesis
Sde_1190	PWY-761	rhizobactin 1021 biosynthesis
Sde_1197	PWY-5663	tetrahydrobiopterin biosynthesis I
Sde_1197	PWY-5664	tetrahydrobiopterin biosynthesis II
Sde_1197	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Sde_1197	PWY-6703	preQ<sub>0</sub> biosynthesis
Sde_1197	PWY-6983	tetrahydrobiopterin biosynthesis III
Sde_1197	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Sde_1205	PWY-6829	tRNA methylation (yeast)
Sde_1205	PWY-7285	methylwyosine biosynthesis
Sde_1205	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Sde_1221	PWY-6834	spermidine biosynthesis III
Sde_1230	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Sde_1232	PWY-5913	TCA cycle VI (obligate autotrophs)
Sde_1232	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Sde_1232	PWY-6638	sulfolactate degradation III
Sde_1232	PWY-6642	(<i>R</i>)-cysteate degradation
Sde_1232	PWY-6643	coenzyme M biosynthesis II
Sde_1232	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Sde_1232	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Sde_1232	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Sde_1243	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Sde_1243	PWY-7177	UTP and CTP dephosphorylation II
Sde_1243	PWY-7185	UTP and CTP dephosphorylation I
Sde_1244	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Sde_1244	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Sde_1245	PWY-1042	glycolysis IV (plant cytosol)
Sde_1245	PWY-1622	formaldehyde assimilation I (serine pathway)
Sde_1245	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Sde_1245	PWY-5484	glycolysis II (from fructose 6-phosphate)
Sde_1245	PWY-5723	Rubisco shunt
Sde_1245	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Sde_1245	PWY-6886	1-butanol autotrophic biosynthesis
Sde_1245	PWY-6901	superpathway of glucose and xylose degradation
Sde_1245	PWY-7003	glycerol degradation to butanol
Sde_1245	PWY-7124	ethylene biosynthesis V (engineered)
Sde_1245	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Sde_1247	PWY-7560	methylerythritol phosphate pathway II
Sde_1248	PWY-7560	methylerythritol phosphate pathway II
Sde_1254	PWY-2723	trehalose degradation V
Sde_1254	PWY-3801	sucrose degradation II (sucrose synthase)
Sde_1254	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Sde_1254	PWY-5661	GDP-glucose biosynthesis
Sde_1254	PWY-5661-1	Sde_1254|Sde_1254|YP_526728.1|GeneID:3965236
Sde_1254	PWY-5940	streptomycin biosynthesis
Sde_1254	PWY-5941	glycogen degradation II (eukaryotic)
Sde_1254	PWY-622	starch biosynthesis
Sde_1254	PWY-6731	starch degradation III
Sde_1254	PWY-6737	starch degradation V
Sde_1254	PWY-6749	CMP-legionaminate biosynthesis I
Sde_1254	PWY-7238	sucrose biosynthesis II
Sde_1254	PWY-7343	UDP-glucose biosynthesis
Sde_1272	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
Sde_1272	PWY-7248	pectin degradation III
Sde_1273	PWY-7242	D-fructuronate degradation
Sde_1277	PWY-1042	glycolysis IV (plant cytosol)
Sde_1277	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Sde_1277	PWY-5484	glycolysis II (from fructose 6-phosphate)
Sde_1277	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Sde_1277	PWY-7385	1,3-propanediol biosynthesis (engineered)
Sde_1278	PWY-5484	glycolysis II (from fructose 6-phosphate)
Sde_1280	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Sde_1284	PWY-6986	alginate degradation
Sde_1285	PWY-6807	xyloglucan degradation II (exoglucanase)
Sde_1300	PWY-2941	L-lysine biosynthesis II
Sde_1300	PWY-2942	L-lysine biosynthesis III
Sde_1300	PWY-5097	L-lysine biosynthesis VI
Sde_1300	PWY-6559	spermidine biosynthesis II
Sde_1300	PWY-6562	norspermidine biosynthesis
Sde_1300	PWY-7153	grixazone biosynthesis
Sde_1303	PWY-4041	&gamma;-glutamyl cycle
Sde_1303	PWY-5826	hypoglycin biosynthesis
Sde_1305	PWY-6339	syringate degradation
Sde_1307	PWY-6339	syringate degradation
Sde_1308	PWY-1042	glycolysis IV (plant cytosol)
Sde_1308	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Sde_1308	PWY-5484	glycolysis II (from fructose 6-phosphate)
Sde_1308	PWY-5723	Rubisco shunt
Sde_1308	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Sde_1308	PWY-6886	1-butanol autotrophic biosynthesis
Sde_1308	PWY-6901	superpathway of glucose and xylose degradation
Sde_1308	PWY-7003	glycerol degradation to butanol
Sde_1308	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Sde_1308	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Sde_1330	PWY-5676	acetyl-CoA fermentation to butanoate II
Sde_1330	PWY-5741	ethylmalonyl-CoA pathway
Sde_1330	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Sde_1353	PWY-3781	aerobic respiration I (cytochrome c)
Sde_1353	PWY-4521	arsenite oxidation I (respiratory)
Sde_1353	PWY-6692	Fe(II) oxidation
Sde_1353	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Sde_1372	PWY-5988	wound-induced proteolysis I
Sde_1372	PWY-6018	seed germination protein turnover
Sde_1379	PWY-1042	glycolysis IV (plant cytosol)
Sde_1379	PWY-5484	glycolysis II (from fructose 6-phosphate)
Sde_1379	PWY-6901	superpathway of glucose and xylose degradation
Sde_1379	PWY-7003	glycerol degradation to butanol
Sde_1380	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Sde_1381	PWY-5101	L-isoleucine biosynthesis II
Sde_1381	PWY-5103	L-isoleucine biosynthesis III
Sde_1381	PWY-5104	L-isoleucine biosynthesis IV
Sde_1381	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Sde_1382	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Sde_1382	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Sde_1382	PWY-7242	D-fructuronate degradation
Sde_1382	PWY-7310	D-glucosaminate degradation
Sde_1394	PWY-3121	linamarin degradation
Sde_1394	PWY-5176	coumarin biosynthesis (via 2-coumarate)
Sde_1394	PWY-6002	lotaustralin degradation
Sde_1394	PWY-6788	cellulose degradation II (fungi)
Sde_1394	PWY-7089	taxiphyllin bioactivation
Sde_1394	PWY-7091	linustatin bioactivation
Sde_1394	PWY-7092	neolinustatin bioactivation
Sde_1405	PWY-6700	queuosine biosynthesis
Sde_1406	PWY-6700	queuosine biosynthesis
Sde_1410	PWY-2301	<i>myo</i>-inositol biosynthesis
Sde_1410	PWY-4702	phytate degradation I
Sde_1410	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Sde_1413	PWY-6823	molybdenum cofactor biosynthesis
Sde_1413	PWY-6891	thiazole biosynthesis II (Bacillus)
Sde_1413	PWY-6892	thiazole biosynthesis I (E. coli)
Sde_1413	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Sde_1417	PWY-6823	molybdenum cofactor biosynthesis
Sde_1417	PWY-6891	thiazole biosynthesis II (Bacillus)
Sde_1417	PWY-6892	thiazole biosynthesis I (E. coli)
Sde_1417	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Sde_1430	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Sde_1430	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Sde_1430	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Sde_1430	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sde_1430	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Sde_1430	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Sde_1430	PWY-7205	CMP phosphorylation
Sde_1430	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Sde_1430	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sde_1430	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Sde_1430	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sde_1430	PWY-7224	purine deoxyribonucleosides salvage
Sde_1430	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Sde_1430	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Sde_1434	PWY-7560	methylerythritol phosphate pathway II
Sde_1454	PWY-6891	thiazole biosynthesis II (Bacillus)
Sde_1454	PWY-6892	thiazole biosynthesis I (E. coli)
Sde_1459	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Sde_1459	PWY-6596	adenosine nucleotides degradation I
Sde_1459	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Sde_1460	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Sde_1468	PWY-2723	trehalose degradation V
Sde_1468	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Sde_1468	PWY-5661	GDP-glucose biosynthesis
Sde_1468	PWY-5940	streptomycin biosynthesis
Sde_1468	PWY-621	sucrose degradation III (sucrose invertase)
Sde_1468	PWY-622	starch biosynthesis
Sde_1468	PWY-6731	starch degradation III
Sde_1468	PWY-6737	starch degradation V
Sde_1468	PWY-6981	chitin biosynthesis
Sde_1468	PWY-7238	sucrose biosynthesis II
Sde_1468	PWY-7343	UDP-glucose biosynthesis
Sde_1478	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Sde_1478	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Sde_1478	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Sde_1480	PWY-4261	glycerol degradation I
Sde_1482	PWY-4261	glycerol degradation I
Sde_1482	PWY-6118	glycerol-3-phosphate shuttle
Sde_1482	PWY-6952	glycerophosphodiester degradation
Sde_1485	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Sde_1485	PWY-5723	Rubisco shunt
Sde_1496	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Sde_1517	PWY-4381	fatty acid biosynthesis initiation I
Sde_1593	PWY-6527	stachyose degradation
Sde_1596	PWY-6562	norspermidine biosynthesis
Sde_1598	PWY-40	putrescine biosynthesis I
Sde_1598	PWY-43	putrescine biosynthesis II
Sde_1598	PWY-6305	putrescine biosynthesis IV
Sde_1598	PWY-6834	spermidine biosynthesis III
Sde_1605	PWY-1361	benzoyl-CoA degradation I (aerobic)
Sde_1605	PWY-5109	2-methylbutanoate biosynthesis
Sde_1605	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Sde_1605	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
Sde_1605	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Sde_1605	PWY-5177	glutaryl-CoA degradation
Sde_1605	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Sde_1605	PWY-6435	4-hydroxybenzoate biosynthesis V
Sde_1605	PWY-6583	pyruvate fermentation to butanol I
Sde_1605	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
Sde_1605	PWY-6863	pyruvate fermentation to hexanol
Sde_1605	PWY-6883	pyruvate fermentation to butanol II
Sde_1605	PWY-6944	androstenedione degradation
Sde_1605	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Sde_1605	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Sde_1605	PWY-7007	methyl ketone biosynthesis
Sde_1605	PWY-7046	4-coumarate degradation (anaerobic)
Sde_1605	PWY-7094	fatty acid salvage
Sde_1605	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Sde_1605	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
Sde_1605	PWY-735	jasmonic acid biosynthesis
Sde_1605	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Sde_1606	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Sde_1606	PWY-6435	4-hydroxybenzoate biosynthesis V
Sde_1606	PWY-6863	pyruvate fermentation to hexanol
Sde_1606	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Sde_1606	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Sde_1606	PWY-6948	sitosterol degradation to androstenedione
Sde_1606	PWY-7094	fatty acid salvage
Sde_1606	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
Sde_1606	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
Sde_1606	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
Sde_1606	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
Sde_1606	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
Sde_1606	PWY-735	jasmonic acid biosynthesis
Sde_1613	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Sde_1613	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Sde_1628	PWY-4381	fatty acid biosynthesis initiation I
Sde_1628	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Sde_1628	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Sde_1629	PWY-5367	petroselinate biosynthesis
Sde_1629	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Sde_1629	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Sde_1629	PWY-5989	stearate biosynthesis II (bacteria and plants)
Sde_1629	PWY-5994	palmitate biosynthesis I (animals and fungi)
Sde_1629	PWY-6113	superpathway of mycolate biosynthesis
Sde_1629	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Sde_1629	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Sde_1629	PWY-6951	Sde_1629|Sde_1629|YP_527103.1|GeneID:3965184
Sde_1629	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Sde_1629	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Sde_1629	PWYG-321	mycolate biosynthesis
Sde_1632	PWY-6543	4-aminobenzoate biosynthesis
Sde_1632	PWY-6722	candicidin biosynthesis
Sde_1634	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Sde_1634	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Sde_1634	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sde_1634	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Sde_1634	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Sde_1634	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Sde_1659	PWY-1622	formaldehyde assimilation I (serine pathway)
Sde_1659	PWY-5392	reductive TCA cycle II
Sde_1659	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Sde_1659	PWY-5690	TCA cycle II (plants and fungi)
Sde_1659	PWY-5913	TCA cycle VI (obligate autotrophs)
Sde_1659	PWY-6728	methylaspartate cycle
Sde_1659	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Sde_1659	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Sde_1659	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Sde_1665	PWY-5381	pyridine nucleotide cycling (plants)
Sde_1665	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Sde_1665	PWY-6596	adenosine nucleotides degradation I
Sde_1665	PWY-6606	guanosine nucleotides degradation II
Sde_1665	PWY-6607	guanosine nucleotides degradation I
Sde_1665	PWY-6608	guanosine nucleotides degradation III
Sde_1665	PWY-7185	UTP and CTP dephosphorylation I
Sde_1671	PWY-5958	acridone alkaloid biosynthesis
Sde_1671	PWY-6543	4-aminobenzoate biosynthesis
Sde_1671	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Sde_1671	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Sde_1671	PWY-6722	candicidin biosynthesis
Sde_1675	PWY-6123	inosine-5'-phosphate biosynthesis I
Sde_1675	PWY-6124	inosine-5'-phosphate biosynthesis II
Sde_1675	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Sde_1675	PWY-7234	inosine-5'-phosphate biosynthesis III
Sde_1684	PWY-5913	TCA cycle VI (obligate autotrophs)
Sde_1684	PWY-6549	L-glutamine biosynthesis III
Sde_1684	PWY-6728	methylaspartate cycle
Sde_1684	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Sde_1684	PWY-7124	ethylene biosynthesis V (engineered)
Sde_1684	PWY-7254	TCA cycle VII (acetate-producers)
Sde_1684	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Sde_1697	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Sde_1698	PWY-5194	siroheme biosynthesis
Sde_1698	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Sde_1704	PWY-6902	chitin degradation II
Sde_1725	PWY-7039	phosphatidate metabolism, as a signaling molecule
Sde_1733	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Sde_1733	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Sde_1733	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Sde_1748	PWY-5022	4-aminobutanoate degradation V
Sde_1748	PWY-6728	methylaspartate cycle
Sde_1748	PWY-7126	ethylene biosynthesis IV
Sde_1750	PWY-5686	UMP biosynthesis
Sde_1766	PWY-7153	grixazone biosynthesis
Sde_1790	PWY-6902	chitin degradation II
Sde_1841	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Sde_1841	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Sde_1873	PWY-43	putrescine biosynthesis II
Sde_1891	PWY-7242	D-fructuronate degradation
Sde_1893	PWY-5747	2-methylcitrate cycle II
Sde_1902	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Sde_1920	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Sde_1920	PWY-2201	folate transformations I
Sde_1920	PWY-3841	folate transformations II
Sde_1920	PWY-5030	L-histidine degradation III
Sde_1920	PWY-5497	purine nucleobases degradation II (anaerobic)
Sde_1920	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Sde_1937	PWY-6825	phosphatidylcholine biosynthesis V
Sde_1992	PWY-5392	reductive TCA cycle II
Sde_1992	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Sde_1992	PWY-5690	TCA cycle II (plants and fungi)
Sde_1992	PWY-5913	TCA cycle VI (obligate autotrophs)
Sde_1992	PWY-6728	methylaspartate cycle
Sde_1992	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Sde_1992	PWY-7254	TCA cycle VII (acetate-producers)
Sde_1992	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Sde_2007	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Sde_2007	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Sde_2007	PWY-6164	3-dehydroquinate biosynthesis I
Sde_2010	PWY-2201	folate transformations I
Sde_2010	PWY-3841	folate transformations II
Sde_2013	PWY-6683	sulfate reduction III (assimilatory)
Sde_2018	PWY-5381	pyridine nucleotide cycling (plants)
Sde_2023	PWY-5386	methylglyoxal degradation I
Sde_2035	PWY-6825	phosphatidylcholine biosynthesis V
Sde_2052	PWY-5269	cardiolipin biosynthesis II
Sde_2052	PWY-5668	cardiolipin biosynthesis I
Sde_2056	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Sde_2056	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Sde_2058	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Sde_2058	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Sde_2062	PWY-1622	formaldehyde assimilation I (serine pathway)
Sde_2062	PWY-5484	glycolysis II (from fructose 6-phosphate)
Sde_2072	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Sde_2072	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Sde_2072	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Sde_2072	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Sde_2076	PWY-2161	folate polyglutamylation
Sde_2077	PWY-4381	fatty acid biosynthesis initiation I
Sde_2077	PWY-5743	3-hydroxypropanoate cycle
Sde_2077	PWY-5744	glyoxylate assimilation
Sde_2077	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Sde_2077	PWY-6679	jadomycin biosynthesis
Sde_2077	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Sde_2083	PWY-2941	L-lysine biosynthesis II
Sde_2083	PWY-2942	L-lysine biosynthesis III
Sde_2083	PWY-5097	L-lysine biosynthesis VI
Sde_2083	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Sde_2083	PWY-6559	spermidine biosynthesis II
Sde_2083	PWY-6562	norspermidine biosynthesis
Sde_2083	PWY-7153	grixazone biosynthesis
Sde_2083	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Sde_2084	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Sde_2091	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Sde_2093	PWY-5663	tetrahydrobiopterin biosynthesis I
Sde_2093	PWY-5664	tetrahydrobiopterin biosynthesis II
Sde_2093	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Sde_2093	PWY-6703	preQ<sub>0</sub> biosynthesis
Sde_2093	PWY-6983	tetrahydrobiopterin biosynthesis III
Sde_2093	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Sde_2098	PWY-5667	CDP-diacylglycerol biosynthesis I
Sde_2098	PWY-5981	CDP-diacylglycerol biosynthesis III
Sde_2102	PWY-5392	reductive TCA cycle II
Sde_2102	PWY-5537	pyruvate fermentation to acetate V
Sde_2102	PWY-5538	pyruvate fermentation to acetate VI
Sde_2102	PWY-5690	TCA cycle II (plants and fungi)
Sde_2102	PWY-5913	TCA cycle VI (obligate autotrophs)
Sde_2102	PWY-6728	methylaspartate cycle
Sde_2102	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Sde_2102	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Sde_2103	PWY-5392	reductive TCA cycle II
Sde_2103	PWY-5537	pyruvate fermentation to acetate V
Sde_2103	PWY-5538	pyruvate fermentation to acetate VI
Sde_2103	PWY-5690	TCA cycle II (plants and fungi)
Sde_2103	PWY-5913	TCA cycle VI (obligate autotrophs)
Sde_2103	PWY-6728	methylaspartate cycle
Sde_2103	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Sde_2103	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Sde_2104	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Sde_2104	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Sde_2105	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Sde_2106	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Sde_2107	PWY-3781	aerobic respiration I (cytochrome c)
Sde_2107	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Sde_2107	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Sde_2107	PWY-5690	TCA cycle II (plants and fungi)
Sde_2107	PWY-6728	methylaspartate cycle
Sde_2107	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Sde_2107	PWY-7254	TCA cycle VII (acetate-producers)
Sde_2107	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Sde_2108	PWY-3781	aerobic respiration I (cytochrome c)
Sde_2108	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Sde_2108	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Sde_2108	PWY-5690	TCA cycle II (plants and fungi)
Sde_2108	PWY-6728	methylaspartate cycle
Sde_2108	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Sde_2108	PWY-7254	TCA cycle VII (acetate-producers)
Sde_2108	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Sde_2113	PWY-3221	dTDP-L-rhamnose biosynthesis II
Sde_2113	PWY-6808	dTDP-D-forosamine biosynthesis
Sde_2113	PWY-6942	dTDP-D-desosamine biosynthesis
Sde_2113	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Sde_2113	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Sde_2113	PWY-6974	dTDP-L-olivose biosynthesis
Sde_2113	PWY-6976	dTDP-L-mycarose biosynthesis
Sde_2113	PWY-7104	dTDP-L-megosamine biosynthesis
Sde_2113	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Sde_2113	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Sde_2113	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Sde_2113	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Sde_2113	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Sde_2113	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Sde_2113	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Sde_2113	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Sde_2115	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Sde_2116	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Sde_2117	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
Sde_2117	PWY-5739	GDP-D-perosamine biosynthesis
Sde_2117	PWY-5740	GDP-L-colitose biosynthesis
Sde_2117	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Sde_2130	PWY-3221	dTDP-L-rhamnose biosynthesis II
Sde_2130	PWY-6808	dTDP-D-forosamine biosynthesis
Sde_2130	PWY-6942	dTDP-D-desosamine biosynthesis
Sde_2130	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Sde_2130	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Sde_2130	PWY-6974	dTDP-L-olivose biosynthesis
Sde_2130	PWY-6976	dTDP-L-mycarose biosynthesis
Sde_2130	PWY-7104	dTDP-L-megosamine biosynthesis
Sde_2130	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Sde_2130	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Sde_2130	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Sde_2130	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Sde_2130	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Sde_2130	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Sde_2130	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Sde_2130	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Sde_2131	PWY-3221	dTDP-L-rhamnose biosynthesis II
Sde_2131	PWY-6808	dTDP-D-forosamine biosynthesis
Sde_2131	PWY-6942	dTDP-D-desosamine biosynthesis
Sde_2131	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Sde_2131	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Sde_2131	PWY-6974	dTDP-L-olivose biosynthesis
Sde_2131	PWY-6976	dTDP-L-mycarose biosynthesis
Sde_2131	PWY-7104	dTDP-L-megosamine biosynthesis
Sde_2131	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Sde_2131	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Sde_2131	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Sde_2131	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Sde_2131	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Sde_2131	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Sde_2131	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Sde_2131	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Sde_2133	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Sde_2133	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Sde_2133	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Sde_2134	PWY-5659	GDP-mannose biosynthesis
Sde_2134	PWY-6073	alginate biosynthesis I (algal)
Sde_2134	PWY-6082	alginate biosynthesis II (bacterial)
Sde_2134	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Sde_2136	PWY-5340	sulfate activation for sulfonation
Sde_2140	PWY-7205	CMP phosphorylation
Sde_2141	PWY-5686	UMP biosynthesis
Sde_2143	PWY-5278	sulfite oxidation III
Sde_2143	PWY-5340	sulfate activation for sulfonation
Sde_2143	PWY-6683	sulfate reduction III (assimilatory)
Sde_2143	PWY-6932	selenate reduction
Sde_2145	PWY-5278	sulfite oxidation III
Sde_2145	PWY-5340	sulfate activation for sulfonation
Sde_2145	PWY-6683	sulfate reduction III (assimilatory)
Sde_2145	PWY-6932	selenate reduction
Sde_2146	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Sde_2146	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
Sde_2147	PWY-3461	L-tyrosine biosynthesis II
Sde_2147	PWY-3462	L-phenylalanine biosynthesis II
Sde_2147	PWY-6120	L-tyrosine biosynthesis III
Sde_2147	PWY-6627	salinosporamide A biosynthesis
Sde_2147	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Sde_2150	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
Sde_2150	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
Sde_2150	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
Sde_2150	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Sde_2150	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
Sde_2150	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
Sde_2150	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
Sde_2150	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
Sde_2150	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Sde_2150	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
Sde_2185	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Sde_2235	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Sde_2239	PWY-6936	seleno-amino acid biosynthesis
Sde_2252	PWY-5316	nicotine biosynthesis
Sde_2252	PWY-7342	superpathway of nicotine biosynthesis
Sde_2258	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Sde_2258	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Sde_2259	PWY-5964	guanylyl molybdenum cofactor biosynthesis
Sde_2298	PWY-6871	3-methylbutanol biosynthesis
Sde_2355	PWY-6683	sulfate reduction III (assimilatory)
Sde_2356	PWY-5194	siroheme biosynthesis
Sde_2356	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Sde_2357	PWY-6823	molybdenum cofactor biosynthesis
Sde_2359	PWY-6823	molybdenum cofactor biosynthesis
Sde_2371	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Sde_2371	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Sde_2376	PWY-2201	folate transformations I
Sde_2376	PWY-5497	purine nucleobases degradation II (anaerobic)
Sde_2385	PWY-5686	UMP biosynthesis
Sde_2395	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Sde_2395	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Sde_2395	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Sde_2395	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Sde_2396	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sde_2413	PWY-5386	methylglyoxal degradation I
Sde_2422	PWY-3781	aerobic respiration I (cytochrome c)
Sde_2422	PWY-4521	arsenite oxidation I (respiratory)
Sde_2422	PWY-6692	Fe(II) oxidation
Sde_2422	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Sde_2423	PWY-4983	L-citrulline-nitric oxide cycle
Sde_2423	PWY-4984	urea cycle
Sde_2423	PWY-5	canavanine biosynthesis
Sde_2423	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Sde_2423	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Sde_2428	PWY-5686	UMP biosynthesis
Sde_2441	PWY-4981	L-proline biosynthesis II (from arginine)
Sde_2441	PWY-4984	urea cycle
Sde_2441	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Sde_2458	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Sde_2458	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Sde_2458	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Sde_2458	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Sde_2458	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sde_2458	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sde_2458	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Sde_2458	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Sde_2459	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Sde_2459	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Sde_2459	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Sde_2459	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Sde_2459	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sde_2459	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sde_2459	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Sde_2459	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Sde_2501	PWY-6807	xyloglucan degradation II (exoglucanase)
Sde_2505	PWY-4261	glycerol degradation I
Sde_2523	PWY-6871	3-methylbutanol biosynthesis
Sde_2524	PWY-5316	nicotine biosynthesis
Sde_2524	PWY-7342	superpathway of nicotine biosynthesis
Sde_2525	PWY-6703	preQ<sub>0</sub> biosynthesis
Sde_2526	PWY-6703	preQ<sub>0</sub> biosynthesis
Sde_2536	PWY-6803	phosphatidylcholine acyl editing
Sde_2536	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
Sde_2536	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
Sde_2536	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
Sde_2538	PWY-5669	phosphatidylethanolamine biosynthesis I
Sde_2539	PWY-5101	L-isoleucine biosynthesis II
Sde_2539	PWY-5103	L-isoleucine biosynthesis III
Sde_2539	PWY-5104	L-isoleucine biosynthesis IV
Sde_2539	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Sde_2543	PWY-5101	L-isoleucine biosynthesis II
Sde_2543	PWY-5103	L-isoleucine biosynthesis III
Sde_2543	PWY-5104	L-isoleucine biosynthesis IV
Sde_2543	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Sde_2543	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Sde_2543	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Sde_2543	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Sde_2544	PWY-5101	L-isoleucine biosynthesis II
Sde_2544	PWY-5103	L-isoleucine biosynthesis III
Sde_2544	PWY-5104	L-isoleucine biosynthesis IV
Sde_2544	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Sde_2544	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Sde_2544	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Sde_2544	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Sde_2553	PWY-5381	pyridine nucleotide cycling (plants)
Sde_2553	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Sde_2563	PWY-7560	methylerythritol phosphate pathway II
Sde_2567	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Sde_2567	PWY-6167	flavin biosynthesis II (archaea)
Sde_2567	PWY-6168	flavin biosynthesis III (fungi)
Sde_2573	PWY-6891	thiazole biosynthesis II (Bacillus)
Sde_2573	PWY-6892	thiazole biosynthesis I (E. coli)
Sde_2573	PWY-7560	methylerythritol phosphate pathway II
Sde_2586	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Sde_2586	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Sde_2586	PWY-5989	stearate biosynthesis II (bacteria and plants)
Sde_2586	PWY-5994	palmitate biosynthesis I (animals and fungi)
Sde_2586	PWY-6113	superpathway of mycolate biosynthesis
Sde_2586	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Sde_2586	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Sde_2586	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Sde_2586	PWYG-321	mycolate biosynthesis
Sde_2591	PWY-7560	methylerythritol phosphate pathway II
Sde_2610	PWY-6823	molybdenum cofactor biosynthesis
Sde_2622	PWY-2941	L-lysine biosynthesis II
Sde_2622	PWY-2942	L-lysine biosynthesis III
Sde_2622	PWY-5097	L-lysine biosynthesis VI
Sde_2632	PWY-6807	xyloglucan degradation II (exoglucanase)
Sde_2633	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Sde_2644	PWY-6807	xyloglucan degradation II (exoglucanase)
Sde_2661	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Sde_2668	PWY-2781	<i>cis</i>-zeatin biosynthesis
Sde_2672	PWY-6938	NADH repair
Sde_2679	PWY-5669	phosphatidylethanolamine biosynthesis I
Sde_2681	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Sde_2681	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Sde_2685	PWY-6164	3-dehydroquinate biosynthesis I
Sde_2686	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Sde_2700	PWY-5839	menaquinol-7 biosynthesis
Sde_2700	PWY-5844	menaquinol-9 biosynthesis
Sde_2700	PWY-5849	menaquinol-6 biosynthesis
Sde_2700	PWY-5890	menaquinol-10 biosynthesis
Sde_2700	PWY-5891	menaquinol-11 biosynthesis
Sde_2700	PWY-5892	menaquinol-12 biosynthesis
Sde_2700	PWY-5895	menaquinol-13 biosynthesis
Sde_2717	PWY-1042	glycolysis IV (plant cytosol)
Sde_2717	PWY-5484	glycolysis II (from fructose 6-phosphate)
Sde_2717	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Sde_2717	PWY-7003	glycerol degradation to butanol
Sde_2718	PWY-6749	CMP-legionaminate biosynthesis I
Sde_2719	PWY-6614	tetrahydrofolate biosynthesis
Sde_2728	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Sde_2728	PWY-5686	UMP biosynthesis
Sde_2728	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Sde_2729	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Sde_2729	PWY-5686	UMP biosynthesis
Sde_2729	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Sde_2730	PWY-2941	L-lysine biosynthesis II
Sde_2730	PWY-2942	L-lysine biosynthesis III
Sde_2730	PWY-5097	L-lysine biosynthesis VI
Sde_2775	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Sde_2775	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Sde_2803	PWY-6123	inosine-5'-phosphate biosynthesis I
Sde_2803	PWY-7234	inosine-5'-phosphate biosynthesis III
Sde_2892	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Sde_2901	PWY-6936	seleno-amino acid biosynthesis
Sde_2934	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Sde_2935	PWY-6807	xyloglucan degradation II (exoglucanase)
Sde_2938	PWY-842	starch degradation I
Sde_3037	PWY-6902	chitin degradation II
Sde_3040	PWY-6906	chitin derivatives degradation
Sde_3040	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Sde_3040	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Sde_3057	PWY-5057	L-valine degradation II
Sde_3057	PWY-5076	L-leucine degradation III
Sde_3057	PWY-5078	L-isoleucine degradation II
Sde_3057	PWY-5101	L-isoleucine biosynthesis II
Sde_3057	PWY-5103	L-isoleucine biosynthesis III
Sde_3057	PWY-5104	L-isoleucine biosynthesis IV
Sde_3057	PWY-5108	L-isoleucine biosynthesis V
Sde_3061	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Sde_3135	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Sde_3137	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Sde_3138	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Sde_3138	PWY-6578	8-amino-7-oxononanoate biosynthesis III
Sde_3138	PWY-7147	8-amino-7-oxononanoate biosynthesis II
Sde_3139	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Sde_3162	PWY-3781	aerobic respiration I (cytochrome c)
Sde_3162	PWY-6692	Fe(II) oxidation
Sde_3162	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
Sde_3162	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Sde_3170	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Sde_3170	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Sde_3175	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Sde_3175	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Sde_3194	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Sde_3204	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Sde_3204	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Sde_3204	PWY-6269	adenosylcobalamin salvage from cobinamide II
Sde_3208	PWY-5656	mannosylglycerate biosynthesis I
Sde_3210	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Sde_3252	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Sde_3255	PWY-7560	methylerythritol phosphate pathway II
Sde_3262	PWY-6807	xyloglucan degradation II (exoglucanase)
Sde_3271	PWY-6902	chitin degradation II
Sde_3277	PWY-1042	glycolysis IV (plant cytosol)
Sde_3277	PWY-5484	glycolysis II (from fructose 6-phosphate)
Sde_3277	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Sde_3277	PWY-7003	glycerol degradation to butanol
Sde_3278	PWY-5484	glycolysis II (from fructose 6-phosphate)
Sde_3279	PWY-1042	glycolysis IV (plant cytosol)
Sde_3279	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Sde_3279	PWY-5484	glycolysis II (from fructose 6-phosphate)
Sde_3279	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Sde_3279	PWY-7385	1,3-propanediol biosynthesis (engineered)
Sde_3284	PWY-6986	alginate degradation
Sde_3334	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Sde_3334	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Sde_3334	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Sde_3335	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Sde_3335	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Sde_3337	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Sde_3337	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Sde_3344	PWY-5381	pyridine nucleotide cycling (plants)
Sde_3344	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Sde_3356	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Sde_3377	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Sde_3377	PWY-6148	tetrahydromethanopterin biosynthesis
Sde_3377	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Sde_3377	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Sde_3379	PWY-6654	phosphopantothenate biosynthesis III
Sde_3380	PWY-1622	formaldehyde assimilation I (serine pathway)
Sde_3380	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Sde_3380	PWY-5913	TCA cycle VI (obligate autotrophs)
Sde_3380	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Sde_3380	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Sde_3380	PWY-6549	L-glutamine biosynthesis III
Sde_3380	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Sde_3380	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Sde_3380	PWY-7124	ethylene biosynthesis V (engineered)
Sde_3381	PWY-6891	thiazole biosynthesis II (Bacillus)
Sde_3381	PWY-6892	thiazole biosynthesis I (E. coli)
Sde_3381	PWY-7560	methylerythritol phosphate pathway II
Sde_3387	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Sde_3387	PWY-5723	Rubisco shunt
Sde_3393	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Sde_3398	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Sde_3400	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Sde_3400	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Sde_3400	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Sde_3400	PWY-6406	salicylate biosynthesis I
Sde_3401	PWY-6012	acyl carrier protein metabolism I
Sde_3401	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Sde_3434	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Sde_3434	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Sde_3447	PWY-1081	homogalacturonan degradation
Sde_3447	PWY-7246	pectin degradation II
Sde_3447	PWY-7248	pectin degradation III
Sde_3450	PWY-6168	flavin biosynthesis III (fungi)
Sde_3450	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Sde_3452	PWY-5269	cardiolipin biosynthesis II
Sde_3452	PWY-5668	cardiolipin biosynthesis I
Sde_3453	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Sde_3453	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Sde_3453	PWY-6896	thiamin salvage I
Sde_3453	PWY-6897	thiamin salvage II
Sde_3455	PWY-6167	flavin biosynthesis II (archaea)
Sde_3455	PWY-6168	flavin biosynthesis III (fungi)
Sde_3456	PWY-6167	flavin biosynthesis II (archaea)
Sde_3456	PWY-6168	flavin biosynthesis III (fungi)
Sde_3456	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Sde_3457	PWY-6167	flavin biosynthesis II (archaea)
Sde_3457	PWY-6168	flavin biosynthesis III (fungi)
Sde_3457	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Sde_3460	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Sde_3460	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Sde_3460	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Sde_3460	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Sde_3460	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sde_3460	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sde_3460	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Sde_3460	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Sde_3482	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Sde_3482	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Sde_3498	PWY-6157	autoinducer AI-1 biosynthesis
Sde_3583	PWY-6840	homoglutathione biosynthesis
Sde_3583	PWY-7255	ergothioneine biosynthesis I (bacteria)
Sde_3603	PWY-3121	linamarin degradation
Sde_3603	PWY-5176	coumarin biosynthesis (via 2-coumarate)
Sde_3603	PWY-6002	lotaustralin degradation
Sde_3603	PWY-6788	cellulose degradation II (fungi)
Sde_3603	PWY-7089	taxiphyllin bioactivation
Sde_3603	PWY-7091	linustatin bioactivation
Sde_3603	PWY-7092	neolinustatin bioactivation
Sde_3605	PWY-6902	chitin degradation II
Sde_3612	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Sde_3620	PWY-4202	arsenate detoxification I (glutaredoxin)
Sde_3641	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Sde_3642	PWY-3341	L-proline biosynthesis III
Sde_3642	PWY-4981	L-proline biosynthesis II (from arginine)
Sde_3642	PWY-6344	L-ornithine degradation II (Stickland reaction)
Sde_3644	PWY-5344	L-homocysteine biosynthesis
Sde_3647	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Sde_3656	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Sde_3666	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Sde_3666	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Sde_3667	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Sde_3667	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Sde_3670	PWY-4983	L-citrulline-nitric oxide cycle
Sde_3670	PWY-4984	urea cycle
Sde_3670	PWY-5	canavanine biosynthesis
Sde_3670	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Sde_3670	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Sde_3672	PWY-5686	UMP biosynthesis
Sde_3675	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Sde_3675	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Sde_3676	PWY-6749	CMP-legionaminate biosynthesis I
Sde_3691	PWY-7456	mannan degradation
Sde_3695	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Sde_3850	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Sde_3870	PWY-6902	chitin degradation II
Sde_3882	PWY-6807	xyloglucan degradation II (exoglucanase)
Sde_3948	PWY-6749	CMP-legionaminate biosynthesis I
Sde_3959	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Sde_3966	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Sde_3968	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Sde_3982	PWY-6902	chitin degradation II
Sde_3999	PWY-4702	phytate degradation I
