        thrL     280 ..     302 +   -12  -5.75342   GAAACACAGAAAAAA           GCCCGCAC CTGAACA GTGCGGGC           TTTTTTTTCGACCAG 100 41
        thrA NONE
        thrB NONE
        thrC    5103 ..    5113 +  -8.2  -3.23216   GGCGTAACCGCCATC                 CGGC GAT GCCG                 TTACTGCTCGTAGCG  64 108
        talB    8600 ..    8610 +  -5.4  -2.68487   AAAACTGGAAAAAAT                 GATC GGC GATC                 TGCTGTAATCATTAA  50 7
        mogA    9656 ..    9679 +  -4.4  -3.06515   GCGCCGAGTAGCTGA          GCGTCAGGCG CATC CGTCAGACCC           ATTTTCGGCATCAGC  47 362
 STM474_0012   11454 ..   11468 +  -4.2  -3.27475   TCCCCCTTGATGACG               TGGGTT ACG ACCCCA               TCTTGTAGTCAACCG  48 55
        dnaK   13538 ..   13564 +   -18   -2.9518   GGGTAATTACTGGCA         CGGGCGAAGAGG TTT CCTCTCCGCCCG         TGTATGCATGTTAAG 100 54
        dnaJ   14760 ..   14779 + -11.4  -5.29782   TTGTATTTTTCTTCA            GCCCGGGT GTAT ATCCGGGC             TTTTTTCTGCCTGTA 100 51
 STM474_0015   16060 ..   16072 +  -4.9   -3.6106   CCTTGTGTTAATTAT                TCATT TAT AATGA                TTTCGGAGTGTTAAA  57 124
 STM474_0016   16451 ..   16466 +    -9  -4.16146   TCATTTGCAGTATCA              GGCTCA TCCG TGAGCC               TTTTACGCGTCTTTT  82 44
 STM474_0019   20007 ..   20024 + -10.5  -4.36914   GGCTTCATGATTCAA             GCCCTGG TTTA CCGGGGC              TTTTCTCCACCAGGG  87 66
 STM474_0020   23093 ..   23122 + -11.6  -4.25104   CTGGACTATTAGTTT       GAGATTCGAAGG CGCGTT CTTTCGAATCTC        TTTTCCTGCGCCCCC  93 64
 STM474_0021   24321 ..   24361 +  -2.8  -3.85748   ACGACGTTGAGTGGC TGTTTTATTGCTTCTGACA TTTA TATCAGAA-CAAGAAGACA  CTTTTTTTCGCATAA  52 307
        bcfA   25006 ..   25024 +  -5.3  -5.69473   TTTAGCATGGTTTAT             TCCTGAT TCCTT ATCGGGA             TTTTTTTCTCGTCTG 100 20
        bcfB NONE
        bcfC NONE
        bcfD NONE
        bcfE NONE
        bcfF NONE
        bcfG   31224 ..   31243 + -11.4  -3.58533   ACCTATTTTTCAGGC            GTCTCCCG ATAG CGGGAGGC             TTTCCGAACTTATCG  87 40
        bcfH NONE
 STM474_0030   32922 ..   32936 +  -5.8  -4.21773   CCTTTAGCACTTTTT               TATCAT GTA ATGATA               TTATTTCTCTTAACG  67 502
 STM474_0033   34714 ..   34727 +  -3.1  -3.58881   ATTCCAGACACTTTA               TG-CGC ATT GCGGCA               ATTTTTATCATCTTT  49 371
 STM474_0035   37065 ..   37095 + -14.8  -3.49938   TTGCATAACTAAGTA       TGTTATGCGGCCGG TTA TCGACCGCATAACA       TTATGGCTTATTTGC 100 33
 STM474_0038   41668 ..   41703 + -11.2  -4.86731   CACTTAGGGCGATGC    CCACCTGATCCGGTCAC TCT GTG-CCGGATCAGGTTC    TTTTATTTCAGGGAA 100 69
 STM474_0039   42920 ..   42938 +  -3.9  -3.81948   TTTGTTTGAAGGTAG             TATTCGC AGGGA GTGAATA             TGTTTTCTCACATTA  55 32
 STM474_0040   44247 ..   44304 +  -7.2  -2.98447   TCGGACGGCTTAAAA ATCCAGAGTATTAATTTTCGTGGTCCC CATGA GGGGCGATGAGA-TTAATACACTGGAG ATTTATCATGAATAC  59 87
 STM474_0041   46062 ..   46079 +  -9.1  -3.56704   GACTGCACTAAAAAA             GTCCGGC GTAA GTCGGAC              TTCATTTCGTAAAAA  73 60
        nhaA   47378 ..   47389 +  -5.8  -2.53213   CGAAGGAAAGGGGGA                GCGA TGTA TCGC                 TCCCTTGCGACATTG  49 47
        nhaR   48336 ..   48366 + -18.4  -2.83747   TACCTACCGTAATAC       TTCCGGCTGCGG TATTAAC CCGCAGCCGGAA       TCATTCTACAAGTTC 100 44
        yaaY NONE
        ribF NONE
        ileS NONE
        lspA   57199 ..   57217 +  -5.2  -4.45485   GCATAAGCGTAAATA             CCGGGTGG CGC TTATCCGG             TTTTGTAGGTCTGAT  71 35
        slpA NONE
        ispH   58893 ..   58911 +    -6  -5.33848   TATTCATCTGAAAAA             CCAGCA CAATCGT TGCTGG             TTTTTTGGTTGTAAT  91 172
 STM474_0053 NONE
        rihC   61144 ..   61175 +  -7.2  -4.40963   TCTCCGGCCTGCCCA      CTTTCCCGTAGCTG ATCT CCGCTTCGAGAAAG       TTATTTTTCACGCCT  79 85
       citC2 NONE
       citD2 NONE
        cite   70849 ..   70859 +  -4.6  -3.20227   AAAGTGGTGGCGCTG                 TCGG CTT CCGG                 TATTCGTGATTAAGG  50 2
       citF2 NONE
       citX2 NONE
        citG   73869 ..   73892 + -12.6  -3.45743   CATTCTCTCCAGCAA          TGATTCATCC TGCG GGATGAATCA           TGTCTTTTACTGATA  93 54
        dapB   74896 ..   74914 + -11.8  -5.26119   TTAATTGATTACAAA             GGGCAATA TAT TATTGCCC             TTTTGTTTTTGCCCC 100 80
        carA NONE
        carB   80331 ..   80350 + -10.8  -5.80817   AATATAATGTTGAAA            GGGTTTCT GTAA AGAAACCC             TTTTTTTATCTTGCG 100 79
        caiF   81049 ..   81074 +  -9.7  -4.64676   ATTTTGGCTTCACGT         CCG-TCGTGCCT TTC AGGCGCGGTCGG         TTTTCTTCGGCCTGC  91 128
 STM474_0078 NONE
        fixA NONE
        fixB NONE
        fixC NONE
        fixX   92072 ..   92130 + -14.4  -2.57931   TTGGCCGGATAAGAT GCGGTAGCGTCGCCATCCGGCAATCATG TGG CGCCAATGCCGGATGGCGGCGGAAACGC CTTATCCGGCCTACA  87 63
        yaaU NONE
 STM474_0085 NONE
 STM474_0086   94711 ..   94725 +  -2.7  -3.38535   TTGTGACGTAACATG               GCACC TTGCT GGCGC               TCTCTTATTATTTCA  46 186
 STM474_0088   98136 ..   98154 + -12.4  -3.47915   CCGGAGGCAGGACGG             CGCCAGCT CCT GGCTGGCG             TTAATTCAATTTTTT  93 310
        yabF NONE
        kefC  100819 ..  100835 +  -2.3  -2.80195   ATAGTGGCGGCAATT              TTTTTTG TAT CAGGAAA              TAATTAATGATCAGT  40 201
        folA  101326 ..  101364 + -13.3  -3.02263   AGCGTCGTTAACGCT  GTAGTGCCGGATGGCGGCG AAA CGCC-TTATCCGGC-CTAC  TCTTGAGCCAGATGT  86 30
        djlA  109246 ..  109275 +  -9.9  -2.57423   TTCAAGTGATTGAAT       TGCCGGATGCGGC TAGC GCCTTATCCGGCC        TACGTTAATGAATGT  68 32
 STM474_0103  117460 ..  117471 +  -3.6  -4.40963   GCCGGGCATTTGAGC                GGCG TCAA TGCC                 TTGTTTTTCAAAGGT  66 247
        araC  122571 ..  122583 +  -4.8  -3.15544   AGGGGGACGGGGTAA                GCAG AATCC CTGC                TTCATCACGCTGACG  52 108
        yabI  123442 ..  123453 +  -7.2  -2.53213   ATTTGATGCCCAATA                GCGC TGAG GCGC                 TGGCTTGACCGCTTA  53 93
 STM474_0114  128786 ..  128808 + -16.4  -5.95539   AGCCTAAAATCACCC           GCCAGCAGAT AAT ATCTGCTGGC           TTTTTTTATTTCGGC 100 87
 STM474_0115  129063 ..  129077 +  -2.1  -4.45807   AGGCGTCAAGGGTTA              CC-GCA TAAA TGCCGG               TTGTTTATTTTCGTA  61 49
        leuO  135523 ..  135559 + -16.2  -4.65838   AAGCGATAAAACCGG    GCAGAATAAATCAGAA ACAAA TTCTGGTTTATTCTGC    TTTTTAGCGTATATC 100 32
        ilvI NONE
        ilvH  138180 ..  138205 +    -9  -5.75945   CCAACAGGAATTATC         GCCCAACCCA ATATCA TCGGTTGGGC          TTTTTTTTGCGAAAT 100 149
        fruR  139709 ..  139726 +  -3.4  -4.07885   ACTTTATATTTTTCT             CGGATT ATATTG AGTCCG              TTTTAAACGGCGGTG  57 390
        yabB NONE
        mraW NONE
        ftsL NONE
        ftsI NONE
        murE NONE
        murF NONE
        mraY NONE
        murD NONE
        ftsW NONE
        murG  151005 ..  151027 +  -3.5  -3.87994   GCGTCGCCAGTGAAG          TTA-G-CCGGG TTG CCCGGACATAA          TTTGTGGCGGTGCCT  55 3
        murC NONE
         ddl NONE
        ftsQ NONE
        ftsA NONE
        ftsZ  156887 ..  156908 +  -6.7  -3.09208   TGCTAAACTGGCCCG           CCGAA-TGTA TAG TACACTTCGG           TTGGATAGGTAATTT  58 75
        lpxc  157880 ..  157923 + -10.3  -5.90981   CTGTCGTATAAAATT CGACTGGTTAACCTGGC ACTCTCTCCG GCCAGGCGAGCCAGTCG TTTTTTTTACTATCC 100 50
        yacA  158661 ..  158677 + -11.5  -2.79175   TTTACTTTATTTGTA              GCTCCGC GGC GCGGGGC              ATTTGAGACTTTATT  77 55
        secA  161512 ..  161529 + -12.7  -5.28176   GAACACAGATAAAAA             GGCGCAG GCGA CTGCGCC              TTTTTTATGGATGCA 100 139
        mutT  162300 ..  162323 +  -5.2   -4.1891   GTCGTCGCTATCAGA          CTGATCGCCG CTGC TGGCGATTCG           TTTCTCTTCGGCGGC  65 380
        guaC  165107 ..  165130 + -14.6  -3.32963   AGCCTCTAATATTCT          GGCTGGCGTA AATG TGCGCCAGCC           TTATCCCATCCCGCT 100 32
        ampD NONE
        ampE  170772 ..  170795 +  -9.6   -3.4252   TGGGGCATTAGTGTA          GCGTT-GTGCC GAT GGCGCTAACGC          TTATGCTGCCTACAA  75 25
        pdhR  176174 ..  176187 +  -5.3  -3.72695   ACCTGTCTTATTAAG               CTTTC TCAC GAAAG                TTTAATGGGACAGGT  59 115
        aceE NONE
        aceF  180819 ..  180836 + -14.1  -5.56568   TGATGTAAGCGAAAA             GCCGGCC CGAC GGCCGGC              TTTTTTTGATAATCT 100 33
        lpdA  182474 ..  182489 + -10.4  -5.64274   ACCCGATACAAAAAA              GCGGCT TTAC AGCCGC               TTTTTTTATGCATGG 100 64
 STM474_0163 NONE
 STM474_0164  183326 ..  183345 +  -4.9  -4.67234   ACGTCGCCTGCTTTG            GTTGGCC AGTACA GGCCATC             TTTTTGGCCTTCGCT  71 343
        acnB  188463 ..  188479 + -10.8  -5.19251   TAATTTACATTTTAA              GGGGGC TAATT GCCCCC              TTTTTATTCATATTA 100 38
        yacl  190043 ..  190059 + -13.7  -5.24129   TCGCCAAACATTCCA              GCCGGGA GTA TCCCGGC              TTTTTTATAGCAGAA 100 107
        kdgT NONE
 STM474_0171 NONE
        pdxA NONE
 STM474_0173  194663 ..  194681 +  -6.6  -3.53012   CAGATATGGCTCTTA             TCGAGGTG CGC CACCACGG             TTTCCGGCAGCGGGC  60 521
        cueO  198189 ..  198208 +   -15  -3.35358   CGCCACCCGGCACAA            TGCCCGGC ATAC GCCGGGCA             TTAATGGTTATTTCG 100 76
         hpt  201647 ..  201659 +  -5.5  -4.56597   AGCGCGTCCAGACGT                TGCTC TTC GGGCA                TTTTTCCCAACAGCG  73 324
        yadG  203096 ..  203109 +  -3.1    -3.794   AAAAACAAGGAGATC               GC-GCA TGA TGCAGC               TTTACTGGGTTGCCC  53 18
 STM474_0182  203914 ..  203963 +  -8.7  -2.57132   TTGCGCTTCGCTTCA CTTCATCTACGGGTCCGTAATATC AAT GG-GTTACGGGTCGGTAGGTGAGG CTTGTCGAAACCCAA  63 69
        yadI  209764 ..  209777 +  -5.2  -2.62788   TTTTGCTACAATGAC               GGCG TTTTTT CGCC                TCGGTTATGATATAT  48 60
        yadE  211470 ..  211487 +  -5.5  -4.59109   CTGCTTTGGAAATTC             TCAGGCA GTAT TGCCCGA              TTTTTAACCCCTGTC  72 475
        hrpB  220759 ..  220781 +  -4.2  -3.28368   ACGGCCCCAACGCGG          CG-CACGAA GAAGTA TTCGTGACG           TGTTATACGTTGCCT  50 5
        mrcB  223454 ..  223467 +  -5.9  -2.90392   TTAATCACGGTAATA               GTGCC GGGT GGCGC                TGTGCTTACCCGGTC  51 37
        fhuA  225933 ..  225954 + -13.7   -4.1466   TTTCTAATTTCTTTT           TGGGCACGG CTTG CCGTGCCCG            TTTTACAAGTTGGCT 100 34
        fhuC NONE
        fhuD NONE
        fhuB  230072 ..  230088 + -12.3   -3.7829   CTTTTTAAATATTAA              GATGCGG ATG CCGCATC              TTTAATGCATCTCGT 100 383
        stfA NONE
        stfC NONE
        stfD NONE
        stfE  235232 ..  235243 +  -5.8  -2.53263   CGTTTAACGCAGGCG                CCAC GTTG GTGG                 TGGATTACCAATGAA  49 0
        stfF NONE
        stfG NONE
 STM474_0210  237304 ..  237320 +  -2.2  -3.14931   GCCTCAAACGCCGAT              GGCG CCAGATATA CGCC              TTCCTCCAGCATCAG  42 230
        yadQ NONE
        yadR  240529 ..  240540 +  -5.8  -3.30124   GTTGTGCCGGATGGC                GACG CGAG CGTC                 TTATCCGGCCTACAG  56 50
         dgt NONE
        htrA  245920 ..  245954 +  -5.1  -4.52589   TGATGCAGTAATCAC    CT-TTGTCCCCCTTCCG CCA TGGAAGGGGG-CAACAC    TTTTCTGTGAAACCC  71 30
        cdaR  247312 ..  247329 +  -6.3  -3.31263   ATCCGGCAACACACA             GCTTACT TACG GGTAAGC              TTGTCCAGATCGGCT  59 112
 STM474_0221  249255 ..  249273 +  -8.1  -4.21275   TCGCCGTAATGCAAA            G-GGGGGC TGTC GCCCCCGC             TTTTCACTCGCTTAA  76 32
        rpsB  255192 ..  255212 + -11.1  -4.89729   TATCACGTTTGGTTA            GGGGGCC TGTATAT GGCCCCC            TTTTTCACTTTTATA 100 199
         tsf  256137 ..  256158 + -13.7  -4.61633   TCCTGATTTTCCTGA           GGAGCCGCC TGAG GGCGGCTTC            TTTTTGCGCCTCTCT 100 35
        pyrH  257107 ..  257125 +  -5.3  -4.11751   ATATTGTGTGACCGT             CTGGTCT GACTG AGACTAG             TTTTCAAGGATTCGT  63 135
         frr  257759 ..  257808 + -16.5  -5.16151   GCGGATGAGTGGTGT ACAAAGCGCCGCGCAGAAGACAT TATC AGGTCTCCTGTGCGGCGTTTTGC TTTTTATTCCGTTTC 100 83
         dxr  259143 ..  259160 +  -8.4  -5.28176   TTTTCGGTCAGGTTA             GCCGTG GTTTTA CACGGC              TTTTTTGTGGATACA  95 130
        uppS NONE
        cdsA NONE
        yaeL  262331 ..  262348 +  -2.7  -3.33696   ACTTTTCAATGATTT             CTCTC GGTTGTAA GAGAG              TTAGTTAGGAAGAAC  46 13
        yaeT  264798 ..  264811 +  -2.4  -3.24747   CTGGTAATTGTTCAC               TGCA AAGGAA TGCA                TTGGTAGTGTAGCGA  44 34
        hlpA NONE
        lpxd  266456 ..  266489 + -13.1  -3.57992   GTTGCCATTCTTTTC     CGGCCTGTCACATTC ATAC GATTGCGGCAGGCCG      TGTTATTATTGCCTT 100 55
        fabZ  266976 ..  266986 +  -4.6  -2.57136   ATGTGTGCTCGTAGC                 CGGG AGG CCTG                 ATTCGTGATTGATAA  46 14
        lpxA NONE
        lpxB NONE
        rnhB  269506 ..  269517 +  -5.8  -3.01243   GTTAAACGCGCTCTG                GGAC TTGT GTCC                 TGATTCTTGTATCGA  52 11
        dnaE NONE
        accA  274022 ..  274042 + -16.9  -5.52384   CTCATTTTTCCCCAA            GAGGCCGGA TAA TCCGGCCTC            TTTTTTTGGTCGAGG 100 49
 STM474_0242  275951 ..  275977 + -15.2  -3.79849   TTGTAATAAGATAAA         TCCTGTCGGTGC TTT GCATCGGCAGGA         TTGTTACTATGCTTA 100 35
        ldcC NONE
        yaer NONE
        tilS  280325 ..  280340 + -10.4  -4.18018   CACCAGTAAGTTCGC              GGCAGC ATAA GCTGCC               TTTTCCCTGACCGAC  86 392
        yaeq NONE
        yaej NONE
        cutF  282390 ..  282410 + -16.9  -3.74077   CACTCACTAATAAAA            GGCCTCGCA GGG TGCGAGGCC            TTTACATATCTGCCG 100 31
        yaeD  288945 ..  288959 +  -6.4  -3.12351   GGTTGAAGAGAAAAA               TCCTGA AAT TCAGGG               TTGACTCTGAAAGAG  52 169
        dkgB  295898 ..  295915 + -11.3  -3.97043   TTTACCCCTCTTTCA             CAGCTCC TGCG GGAGCTG              TTCTTATATATTCGC  91 60
 STM474_0268  298164 ..  298177 +  -3.8  -2.75481   ATAACAGAAGAACCA               GTCC GGTTGA GGAC                TGGTTGACGTTACAG  45 111
        yafD  299032 ..  299056 +  -7.7  -3.62607   GTCAGGTCTGCCGTG          GGGCAGGCCTC TGC GGGTGCTGCCC          TCTATTTTTCTCATA  69 47
        yafE  299869 ..  299889 + -11.1  -4.49644   TATAGCAATTTAAAA            GGCGCCG GGGGAAG CGGCGCC            TTTTGGCTTTTTCGT  93 36
        yafS  303051 ..  303068 +  -3.3  -4.21989   TACGGGTTTCTTTTC             CGCTGTT TTCC AGCCGCG              TTTCTTCCAGTTATG  58 211
        dnaQ  304382 ..  304406 +  -8.6  -5.94597   GTGAAGTAAAAAAAA          CCGTATCACT GTAAA AGGGATACGG          TTTTTTTTCGTCTTC 100 283
 STM474_0283 NONE
 STM474_0284 NONE
 STM474_0285  315969 ..  315982 +  -3.8  -2.57772   CTGCCGTCAGTGAAG               CAGG GCAATG CCTG                ATATATATTTTGTGA  44 11
 STM474_0286 NONE
 STM474_0287  316685 ..  316704 +  -3.6  -3.16881   ATGAAGCATTATTTA            TATGCATT AAAT AATGCAAA             TTCATAAAATAACTA  46 95
 STM474_0288  317366 ..  317390 + -10.7  -5.10656   TTAACGGCTGTTTTT          CCGGCCAGATG TTA TGTCTGGCTGG          TTTTATTGTTTTGAT 100 37
 STM474_0289 NONE
 STM474_0290 NONE
 STM474_0291  319151 ..  319176 + -17.7  -4.71463   TTTAACGGCTGTTTT         TCCGGCCAGAT TTAT ATCTGGCCGGA          TTTATTATTTTGATT 100 36
 STM474_0292 NONE
 STM474_0293 NONE
 STM474_0294 NONE
 STM474_0295  323275 ..  323297 +  -4.9   -2.5474   ACATGCAGCCTGAAG           TATGACAGG TATAC CCTGTGATA           ATGTTATCGCTGCCA  48 131
        sciR NONE
        sciS NONE
 STM474_0298 NONE
 STM474_0299 NONE
 STM474_0300  329783 ..  329793 +  -6.8  -3.45324   TGGTTGCATTATAAA                 GTGC GGG GCAC                 TGTTTCCTGACGGTG  62 356
 STM474_0301  332024 ..  332035 +  -4.4  -2.66733   GATATTGCCCCCCTT                CTCA CCTC TGAG                 TGATCTGAATTAAAC  46 11
 STM474_0302 NONE
        rhs1  336385 ..  336416 +  -5.2  -4.84311   GTATTAAATAATAGT      TGGCCGGGTAAGA AGTTAAC TCTT-CCCGGCTG      TTTTATTATCTAACC  75 287
 STM474_0304 NONE
 STM474_0305  337931 ..  337958 + -10.8  -3.74928   GGTTATAGGGTTTAT        GGTT-ATTTGCTC CTG GAGCAAATAAACC        TTATTACATTGGTAT  85 203
 STM474_0306  338769 ..  338796 +  -2.7  -5.02606   AAATGAAAATAAAAA        GCCGGGAAAGAT CTTTT GTCTT-CCCGGA        TTTTATTATTTAATC  70 41
 STM474_0308  339833 ..  339857 +  -2.8  -5.21236   GAATAATGTGTAAAA         GCCG-GAGGGG TTAT CTTTTCCCGGC          TTTTTATTATCAATT  76 28
 STM474_0310  340496 ..  340510 +  -5.6  -2.69468   CTGGTCACGCCGGAA               GCGCTG AAC CAGAGC               TGGTCTGTGGGCGTC  50 91
 STM474_0311  341183 ..  341196 +  -2.3   -3.6052   CTCTTAGTGTTGAGA               CTCTC GTTG GAGCG                TTATAATTGCTTTTC  49 271
 STM474_0312 NONE
        safA  342211 ..  342253 +  -6.5  -2.92142   TTAATAGTAAACAAC TATTA-GTGTATTGTGCCTT GTTT AAGGCGCAATACACATCAAA TCATCTATTTTTCTT  55 37
        safB NONE
        safC NONE
        safD  346310 ..  346326 + -12.3  -2.66034   CACTCTTTTGTGAGC              GGGGCTT TAT AAGCCCC              TGGTATAAGGTTTGT  81 289
        ybeJ  347731 ..  347745 +  -4.2  -4.20516   GGCGATGTTTTGCTT               GTTTCC ACG GGATAC               TTTGTTAGGTGAACG  62 483
 STM474_0318 NONE
        sinR  349108 ..  349125 + -11.3  -3.65542   AGGCATCGAGATATG             CGACTGG TCAG CCAGTCG              TCTTTTGACGATGCC  87 98
 STM474_0320  349447 ..  349461 +  -2.8  -5.07053   TAAGCGGTATGTTCA               TCACCA GCA TAGTGA               TTTTTTGAAATGCTT  76 105
        gmhA  355515 ..  355533 +    -6  -3.88291   TGGCTGTAAAAATTA             CGCCTT CCCGCTT AAGGCG             TTTGTGGAGGTGATA  66 203
        yafJ  356767 ..  356779 +  -6.2  -3.55444   CCGGACTTTTAAAAT                CGCC CTGAC GGCG                TTTCGGGCCTAACCC  57 475
        dinP  358610 ..  358637 +  -3.4  -2.68823   TCGCATCAGATAACC        TG-TGGATCGAAG ATT CCGCGATCCAACA        ATTATATACGACGGC  42 302
        prfH  360414 ..  360436 +   -12  -3.10173   TATTCCATATTGATA           GCCCGTCC AGAAATG GGACGGGC           ATTTTAGCGCTTTCT  81 144
         gpt  362630 ..  362654 + -17.1  -4.78572   ATCAGCAGCTTTTCA          GAGCGCCCGGC AAT GCCGGGCGCTG          TTTTATTGGTTACAA 100 40
        frsA  363930 ..  363942 +  -2.7  -3.17586   AATTACCGACTGGAT                TAATC ATA GATTG                TGTTAATAGATTGAT  45 7
         crI  364736 ..  364750 +  -9.2  -2.75267   TTTTATTGGCAAATC               CGCCGG AAA CTGGCG               TCATGTTGCGGGTTT  60 354
        proB  366872 ..  366885 +  -3.1  -3.18264   CCCGGTCGCTGTTCA               TCGTG ATGA CATGA                TTACTCGATAAGGAA  46 1
        proA  368218 ..  368231 +  -5.3  -3.30619   ATTGACGCACCGCCC               GGTTA GTTT TAACC                TTCTACCCCGTGATT  54 85
        yoac  370656 ..  370682 + -11.2  -3.22884   TCGTCAAATTAATGT         CTATATATTTAT TGA ATAAATATATAG         TTCATAACTTACTAC  81 141
 STM474_0343  372406 ..  372424 +  -5.3  -5.12971   AGAACGCGGCCGCAC            CGT-TCGG CACC CCGACACG             TTTTTATTGAATATT  79 312
 STM474_0345 NONE
 STM474_0346 NONE
 STM474_0347 NONE
 STM474_0348  377111 ..  377136 +  -6.9  -2.66912   GCGTACTGTGATCAG         TC-GGCGCCA ACTGTCG TGGCGCCAGA         TGCTCTGACTTACGT  55 30
 STM474_0350  378425 ..  378448 +   -14  -2.62613   TGAGTCTGGCTTGCC          TCAGGGATAC GATC GTATCCCTGA           ATATTTCCCATCAAA  86 38
 STM474_0356  385825 ..  385835 +  -2.6  -3.90328   GAACGTTACTGATTA                 TATT TGT AATA                 TTTATCGCCATTGTC  54 29
 STM474_0357 NONE
 STM474_0358 NONE
 STM474_0359  389787 ..  389797 +  -3.2  -3.20573   TGACTGGTAATAAGC                 GCAT TAG GTGC                 TCTTAATCTAAATGC  46 340
 STM474_0360 NONE
 STM474_0361 NONE
 STM474_0362  391421 ..  391440 +    -5  -3.06839   TATAGTTCCTTGACG            GCGTTC AGAAGCAA GAACGC             GTTATTATTTAATGA  51 28
 STM474_0363  391865 ..  391898 + -18.1  -3.61103   TAATATATGCCTGTT     TAGCGCGCGCGCCGC ACTG GCGACGCGGGCGCTA      TTTGGGCTAACCTTG 100 55
 STM474_0367 NONE
 STM474_0368 NONE
 STM474_0369  401273 ..  401287 +   -10  -2.81088   AAAGATAACAAATAA               GTAGCG CAA CGCTAC               CTTGTTACGTCGCTT  71 216
 STM474_0370  402654 ..  402680 +  -7.9  -4.10453   CCTGGCGCATACTGT         CGCCGGGAGCA CGCCT TCCTCCCGTCG         TTTTCACGCCCTTTC  74 51
         mod NONE
         res  407807 ..  407835 + -10.2  -3.40299   ATAGACCATATAAAA        TGGCCGCCGCGC AGCGA GCGTTGCGGTCA        TTCTCCCTGTGCTAA  76 75
 STM474_0373 NONE
 STM474_0374 NONE
 STM474_0375 NONE
 STM474_0376 NONE
 STM474_0377  410886 ..  410899 +  -2.3  -3.34242   GCTCGCCTTATCTCT               CCCCT CAAT AGCGG                TTGATAATTATTCTC  45 8
 STM474_0378  412010 ..  412021 +  -7.2  -2.62396   TGTGCGTAACGCGCC                CCGC CAGA GCGG                 TAATATCCGCCGCTA  57 32
        foxA  414487 ..  414500 +  -5.9  -3.89346   CCAGGCCATTAACCT               TGCCC ATGT GGGCG                TTTCTGCGCTAAGCG  63 255
        dedD  415457 ..  415481 + -12.2  -3.72374   ATTGCATCATAAAAA         TACCCGCCTGG GTTT CC-GGCGGGTA          TATTTATTCCTGGCA  93 45
        prpB  418369 ..  418404 +  -8.2  -3.53811   GTAGGCCTGATAAGG    CGAAGCCGCCATCAGGC AAT GCCGGATGGCA-CTACG    TTTAACCCGCCTACG  67 44
        prpC NONE
        prpD NONE
        prpE  423507 ..  423517 +  -8.2  -2.70932   CGGTCGCCTTTTAAC                 GCGG TAC CCGC                 TGCTTCACGGAAAGG  57 472
        yaiU  427631 ..  427654 + -15.4  -3.61715   ATTTAAACTGAAAAA          TGCCCGTCAA GGAC TTGACGGGCA           TTATTGCAAGGAATG 100 69
        yaiv  428745 ..  428765 +  -6.8  -3.38812   TAGAATAGACCCCAC            CGCTGCCA ATGGC TGCCAGCG            TATTATTACAGGGGC  58 474
        sbmA NONE
        yaiW  432483 ..  432496 +  -2.3  -4.08767   GTTTCTCGATGCTTC               CCGCT GAAC AGCGA                TTTTGAGAGAGTGAA  56 334
        yaiZ  433263 ..  433281 +  -5.3  -3.51825   CGTCTGATAAGCCTG            GAT-CGCG ATCG CGCGGATC             TTGTCATTCACCTCG  55 285
 STM474_0396 NONE
 STM474_0397  436302 ..  436327 + -14.1  -3.03781   GCCAATAGCGGTGCA         TCGTAACGGCG CTTC TGCCGTTACGA          TATGGTTTAAATTAA  89 33
        irap  436904 ..  436960 + -23.5  -2.82635   TTATGAAATAACATA GCCGCTTCGTTTTTATTTTCTTCTG GGTAATA CAGAGCAAAATAAAAACGAAGCGGC TATGGTAATAACAGT 100 78
 STM474_0400  437527 ..  437560 +  -6.8  -3.85704   AAAGCGGCGTAGTGC     TATCGGGTGAGT CCTGAAAAAC ACTCACCCGAAA      TTTCATACTTCCTCC  66 29
        adrA  438884 ..  438899 +  -6.8  -3.61371   ATATCTTTCAGTTCG              CCGGGA TGCT TTCCGG               TTTCGAGTACCATTT  60 182
 STM474_0403 NONE
        yaiI  440297 ..  440310 +  -8.1  -3.14132   TGCTGATATCAAATC               CTGCG TATG CGCAG                TTCCTGGGGGAACGC  64 176
        aroL NONE
        yaia  441114 ..  441130 +  -2.1  -2.64877   ATGAACCACTCGGAA              GGGATTC TGA GTACCCC              TAAATTGTATCTCCA  39 45
        arom NONE
        yaie  442382 ..  442411 + -12.9  -2.72344   GCTATTTGTAACGGT       GA-GTCCCCTCTCC GGC GGAGAGGGGCCCTC       TGGTTAGCGCTGCGC  85 30
        yajF  444594 ..  444604 +  -8.2  -4.13767   CGCCCAGCAGTTCGC                 CGCC TTT GGCG                 TTTTGCAGTAGCAGG  77 259
        phoB  450972 ..  451013 + -15.3  -3.85389   CGACCCGCTTTTAAT GCCTTTTCCGCCAGTAGAAC ACA GGTTT-CTGGCGGAGAAGGC TTTCCATTCTTGAGG 100 27
        phoR  452362 ..  452383 + -13.1  -4.90525   AAGTATAACTTTCCA           TAAGCCAGC GGAT GCTGGCTTA            TTTTCTTTGCAGTTA 100 52
        brnQ NONE
        proY  455514 ..  455566 +  -9.2  -2.66216   GCAGGCGTAGTCGTT TTTCTCTGCCTTATCCGGTCTGCAG GCAA CGGTAGACCGGATAA-GCGGAGCCG CTTCTCCTCCTGGAG  66 31
        malZ  457523 ..  457540 + -12.7  -4.42653   CTTACGCATAAAAAA             GGCTCGC ATTC GCGAGCC              TTTTATCAATGCACT 100 61
        queA  460240 ..  460266 +  -6.6  -2.72344   GTCTTCGGGAATTTA         TTAGCTATGGAA TCA TTCCGTAGCGAG         TCGTTAAACGTCGGA  55 155
         tgt  461410 ..  461426 +  -5.1  -3.54779   ACGTCAGGGGCGACC              CGTTCCA CCT TTGAACG              TTGATTAATTTTAAT  56 1
        yajC NONE
        secD NONE
        secF  464671 ..  464690 +   -10  -6.04953   TAAGTGTTATCTGAA            TCCCGGTC ATGC GATCGGGA             TTTTTTTATTTATGT 100 50
 STM474_0428 NONE
 STM474_0429  465887 ..  465902 +  -3.2  -3.29461   CCGTAAGATGTGATA              GCGATA CCTC TAACGC               TTGTAAAACGGGTTG  48 35
 STM474_0430  466577 ..  466596 +  -6.4  -6.20267   ACATTGTCACTGGAA            TCCCGATC GCAA GGTTGGGA             TTTTTTTGTTTTTAA 100 208
 STM474_0431  466989 ..  467010 + -15.9  -5.07107   CATGCGCCCGAAACG           GGCCAGAGG ACGA CCTCTGGCC            TTTTTTGCAGGTTTA 100 75
 STM474_0434 NONE
        nrdR NONE
        ribd NONE
        ribH NONE
        nusB  471439 ..  471481 +  -5.6  -5.61277   AAAAAGTGATTCACA GGCCGGAAAGATAGCGGG CGCTCGATA CCCGCCGTCT--CCGGCC TTTTCTTTTTTTCTG  93 32
        thiL NONE
        pgpA  473217 ..  473231 +    -7  -3.72576   AGCGCCGATAATCGG               CGCGGC GAC GCCTCG               TTTGCTGAGCAGCCA  62 261
        thiI  478809 ..  478838 +  -8.5  -3.22818   CGTCCGTAATTCCTT       TGCCGGGTGGCGGC TAT GTC-CTACCCGGCC       TATCGTTTTATTTCT  67 32
        phnW NONE
        phnX  485640 ..  485684 + -13.7  -3.34517   CCGGATGGCGCTGTC GCTTATTCGGCCTACAGACTG TAC CGTTTTGTAGGCCGGATAAGG TGTTTACGCCGCCAT 100 49
        yajQ  487901 ..  487948 +  -5.5  -3.90112   TTTGCTGTCGATTTT GACGTAAGCGGAATGCTCTTC CGCCAC GATCAGCGCTTCGCTTACGCC TTTCATTGCCAACAG  61 132
 STM474_0457 NONE
 STM474_0458  492798 ..  492818 + -11.1  -5.08824   AAATGGATAAAAAAA            CCGCCGTTT GTG ACACGGCGG            TTTTTTCAATAGCAA 100 65
        bolA  500865 ..  500878 +  -9.5  -5.23292   AGAATTATGTGAAAA               CGGCC TGCG GGCCG                TTTTGTTTTGTCTGA 100 86
         tig  502485 ..  502506 + -11.6  -5.94713   AAATTTGCACAAAAA           CCCGTCAC CTTTCA GTGACGGG            TTTTTTTTGTCACGT 100 61
        clpP NONE
        clpX  504875 ..  504893 +   -11   -4.3623   CAGTTAGCCAAAAAA             GGGGGGAT TTT ATCTCCCC             TTTCGTTTTTCCTGT  90 58
         lon  507415 ..  507444 +  -8.6  -5.72616   CGCTAATAAAAACAG       GGCTGGCAGG-CT ATTTC GGACTTGCCAGCC       TTTTTTTGTATAGCT 100 58
        hupB  507899 ..  507918 +   -10  -5.45652   GTGACAAAGTACAAG            GGCGCATC AACT GATGTGCC             TTTTTTATTGGCGAT 100 61
        ppid  510073 ..  510088 + -11.8  -4.39571   GTTGTATCCCACAAA              GGCCGC TTTC GCGGCC               TTTTCCATTTCTGAG  95 73
 STM474_0474  510585 ..  510607 + -10.7  -3.00601   ATTTGCCAGACTGTA           GAGGTCATA CCAGT TATGACCTC           TGTACTTGTCGTTTA  76 61
 STM474_0475  511406 ..  511432 +    -5  -3.54741   GATATCTTTCGCCAT         GCCCAGATTCAC CGC GTGATTCAGCGC         TTTGACGAACTCATC  55 380
         cof  514554 ..  514572 + -10.3   -6.0458   GATCTCTTCCAGCAA             GCCAGAC ATTCA GTCTGGC             TTTTTTTTGGTTTCT 100 43
        ybaO NONE
        mdla NONE
        mdlb  519834 ..  519850 +  -6.5  -5.31519   AAACCTCGCCCATCA              TGCACCG TCG TGGTGCG              TTTTTCTTTCCCTGT  87 60
 STM474_0483 NONE
 STM474_0484  521745 ..  521763 +  -4.4  -5.33848   CGTCATCAGGCCATT             AACGCCGC ATA GCGGCATG             TTTTTTAATTGTGAT  84 102
        ybay  523424 ..  523444 + -16.9  -3.14132   TTAATCCTGCGCCAA            CCCTCTCCG TTA CGGAGAGGG            TTAATACACCCAGCG 100 37
       rpmE2 NONE
        rpmJ  526271 ..  526294 + -10.3   -5.4505   AGTTCAGGGAAAGCA          GTGCGTACC AGGGAG GGTGCGCAC           TTTTTTATTACCGGC 100 50
        acrR  533901 ..  533921 +  -4.8  -4.61868   CTCCCCCTGATAATA           T-TCCAGGA AAAC TCCTGGACA            TTTTCTGTGTCGCTA  73 31
        aefA  537534 ..  537561 +  -9.8  -4.57341   GCGCTTCGGCCTCAC        GGCCTTGTGCTA ACCC TTGCTCAAGGCC         TTTTTGCAGGCCCTT  91 183
 STM474_0502 NONE
         apt  540318 ..  540342 + -16.5  -3.09671   TTTTAGCCAGAGAGA          CAACCTCGCTG TAT CGGCGAGGTTG          TGTTAGCATTACCCT 100 62
        dnaX  542324 ..  542342 +  -9.6  -3.30124   ATCCGCCCCATTTGA             TCGTAAGC CCG GCTTGCGA             TTGTGAACCATCAAG  74 26
 STM474_0505  542678 ..  542691 +  -2.3  -2.64099   ATGCAACTGCCGCCA               GGCTT TAAG ATGCC                ATTCTGATGCAAACC  39 5
        recR  543379 ..  543395 +  -3.7  -3.67558   CCCTCAACGTATTTT              TACCATT AAA AATGGCA              TTGTTGAGGTCTATC  53 101
        htpG  545358 ..  545386 +  -5.2  -5.31877   CGAGTACTGTTTGTA       GGCCGGATAAGCG CCAG CGCC-ATCCGGCA        TTTTTTATAATACCT  82 95
         adk NONE
 STM474_0509 NONE
        hemH  547349 ..  547373 +  -4.2  -3.21416   GATGCTGAAACTCAC          GGCGCCGT ACCGTTAAC GCGGCGTC          TTCATCCTCGCCATA  48 10
         gsk  550125 ..  550149 +  -7.8  -3.14211   CGGCGTTGCCCAGTA          CGGCGCGAAT CCCGC GTTCGCGCAG          TTCATCCACGCGGGT  57 361
        ushA  555106 ..  555122 +  -5.8  -4.56597   GTTGCGCCACCATCG              GGTCGG CCATA TCGACC              TTTTTCGCGCCCAGA  75 357
        cueR  560519 ..  560530 +  -5.8  -3.13522   ACTTCGACATGCGTA                CCTG CGCG CAGG                 TCTTCGTCAGCGCAT  52 84
        ybbL  562630 ..  562648 +    -3  -2.74523   CGGAGAGATGCAGGA             GGCGCGTT ATG AACGAGCA             TAATATTACCAATAC  41 4
        ybbM  563821 ..  563840 +  -3.6  -4.57341   CTGATAACGGGTATC            CTGATCCTG TAG CGGGAT-AG            TTTTTAACACCGCTT  69 429
        ybbA NONE
        ybbP  569044 ..  569067 + -12.4  -3.41701   TGATGTGAATAATTT          CGCGCCGGTT TTTA AAACGGCGCG           TACTTTTTTAGTCGC  90 45
 STM474_0530  570356 ..  570390 +  -2.1  -3.84451   TAAAGCGTTTTCCTC    TGCCGGATGTTGGCGT TAAG ACCTCT-TATCCGGCA     TTTCCCTTTACGCCA  51 38
        sfbA NONE
        sfbB NONE
        sfbC  573213 ..  573236 +   -11  -5.27923   AACGTCTTGCCATGT          GCCGCGAAAA ACGA TATTCGCGGC           TTTTTTCTCCAGTTG 100 103
        allA  575998 ..  576012 +  -7.2  -4.12254   CCTTCTTGCATAAGA               TGAACA TAT TGTTCA               TTGTTTATGCTCATA  72 50
        allR  576877 ..  576896 + -13.6  -3.67443   GTAGCCTGAGCCGCA            TCCCGCTC GCTG GAGCGGGA             CTTTTTTAAAATTTT 100 32
         gcl NONE
         gip NONE
        glxR  580510 ..  580535 + -11.9  -3.01712   ATTGTCCTAATTATG         TGTATCGCTGC GGCT GCAGCGATACC          TGTTCACAAGGAACA  81 31
 STM474_0541 NONE
        ybbV NONE
        allP NONE
        allB  584823 ..  584843 + -16.9  -3.83378   TCCGGTGTGATTTAA            TGCCCGTCG TCA CGACGGGCA            TTCTCTATTTTAAGG 100 41
        ybbY NONE
        glxK  587537 ..  587547 +  -2.4   -3.8062   AGTCGCCTTTTTTCA                 CCGG CAC CCAG                 TTGTTGTCGAGGTTA  52 227
        fdrA  592510 ..  592524 +    -2   -3.6682   TTAGAACGTTTGCAA               TAAGGG GTT CCCATG               TTTACATCAGTGGCG  49 23
        ylbE NONE
        ylbF NONE
        arcC  595642 ..  595665 +    -6  -4.07568   ACGTGACGTATCGCT          GTCGGTCA GATTCAGA TGGCCGAC           TTTTCGCCCCGGACG  67 168
        cysS  600018 ..  600047 + -15.1  -6.04324   AAGTAAGCGCTTTTA       CAGGCCGCTCTAT TTGC ATAGAACGGCCTG        TTTTTTATTTTTTCG 100 35
        fimA NONE
        fimI NONE
        fimC NONE
        fimD NONE
        fimH NONE
        fimF  609858 ..  609868 +  -5.4  -4.67607   GTTACTCAATAAAAG                 TTGC TCG GCAA                 TTTCTTTGTTAGACA  73 185
 STM474_0582  618696 ..  618744 +  -8.2  -3.96148   CGCCTTGCGGCATAA CGTGTGC--ACCCCGCCTGCGG CGTCAAA CTGCAGGCGGGTTCAGCGTACG TTTATCGTCCGAGCG  72 26
 STM474_0584  621157 ..  621173 +  -9.4  -5.83822   AACATAAATAATATA              GCCCTG TTAAT CAGGGC              TTTTTTTTGCCTGTC 100 41
 STM474_0585 NONE
 STM474_0586  622137 ..  622166 + -14.3  -3.13867   TCTTTATGCCGCGAT       TCGTCGGGTGGCG CTTG CGCCATCCGACAA        TGTGTTGATGAATGA  95 55
        pheP  625087 ..  625118 +   -16  -2.56596   GGCTCATTAACTTTT      TTGCCCGATCCCAT GTTC ATGCGATCGGGCAA       TCCATTAATGCCGCA 100 31
        apeE  628629 ..  628645 +  -2.2  -4.25104   AAACCCGTTATAACG              TTGGGT TTAGC GCCCGA              TTTTGATGACACGCC  57 3
 STM474_0591  631974 ..  631996 +    -7   -3.1706   GTCCGTGGAAATACT           CTCCGCTA TGTATGC TGGCGGAG           TTGATCCACTGCATT  56 452
 STM474_0601  638953 ..  638988 +  -2.6  -4.56597   CAACAAAGTATAAAG    CTGGTTGAGATC CATAAGATGAAA GATCCCGACCAG     TTTTTGCGCCAGCGC  65 133
         fes  644710 ..  644728 +    -3  -3.13475   CACGCTTTAACCGGG             CACATGTC CAT GACAGGAG             TTGAGTATGGAATTC  45 31
        ybdZ NONE
        entF  648874 ..  648900 +   -14  -5.45652   AATTAAATCCTGAAA         CCCATAATAATT ACT AATTATTATGGG         TTTTTTATTGCAACT 100 65
        fepE  650233 ..  650252 + -12.2  -3.98661   TGATTTACCCGAAAA            GCCGGATA GCGA TATCCGGC             TTTGTCATCAGTGTG  93 38
        ybdA  654718 ..  654731 +  -2.3  -3.54424   ATCGTGGCGCTTACC               CTGGC TTTT GCTGG                TTTGCAGCCCTCGGG  47 328
        entC NONE
        entE NONE
        entB NONE
        entA NONE
        ybdb  660657 ..  660668 +  -2.2  -2.58651   TGTAATGTAAAAAAT                GGGT AACA ATCC                 GGTTTTATCATGTTG  39 102
        cstA  662884 ..  662908 + -12.9  -2.78798   CTTTTTACATCAATA          GCCCTCTCC AGAATAA GGAGAGGGC          ATTTGAATGACAGGT  85 42
        ybdd  663427 ..  663439 +  -3.4  -4.81249   CATAAGCCACTTTCG                TTCC GTGCA GGAA                TTTTTCCGTTTGCGG  70 324
        ybdL  665567 ..  665601 + -10.1  -3.24232   CCACGCTCTGGAGAA     TCGACGGTCTGCA AAAAGCTCC TGCAGGCCGTTGA     TCTGTTTCAGGCGCA  74 53
        ahpC  670548 ..  670579 +  -8.6  -2.58544   GGCGTCGCCTGCTCA      CCCCGGTCACTTAC TTCA GTAAGCTCCCGGGG       ATTCTCAGGCTAGCC  63 73
        ahpF  672446 ..  672466 + -14.1  -5.63517   ATCAATACTCTGAAA            CCGTCTGTT AAT AACAGACGG            TTTTTTATTTCAACG 100 164
 STM474_0630 NONE
 STM474_0631  675466 ..  675478 +  -5.5    -3.445   AAAGGGGAATCCGTA                GCATG AGA CGTGC                GTTTTTAGTGAATAG  57 20
 STM474_0632 NONE
        ynfH  676807 ..  676839 + -13.4  -2.83903   ACGATGATGCAGTAA      AAAGCCCTGCCAGG CGTGA CCTGGCAGGGCGTG      TAAGTTTTTAGCCAC  86 40
 STM474_0635  677429 ..  677447 +  -2.2  -2.87931   GGAAAAATCCTAAAG             CCGCCTGT TTT GCCGGCAG             TCTCTCCGGGATAGC  41 28
        ybdR  678780 ..  678799 + -12.2  -2.87881   AAGGGCTAACGGAAA            GAGGATGC GCAG GCATCCTC             TGTGTAAACGCATTA  80 56
        dpiB NONE
        dpiA  689813 ..  689831 +  -2.4  -3.59979   GCCGCAGCGTATTTA            CCACGGC GGCTAA GCC-TGG             TTTAAGATGCCGGGG  49 13
        pagP  692361 ..  692377 +  -7.3  -4.02302   GTTGTACTGGTATCC              GACACAG CAT TTGTGTC              TATTTTTCATGTAAA  72 171
        cspE  692641 ..  692657 + -10.8  -5.81032   AGCAAGATTTCAAAA              CCCGCC CTTTC GGCGGG              TTTTTTTTGCGCTTA 100 54
        ybeM  694020 ..  694039 +  -5.6  -4.72272   TATTCTCAGGTTAAT            CCGGC-GCG TTA CGCAGCCTG            TTTTTAGTGAAGAAG  74 113
        tatE  694299 ..  694313 +  -9.2  -5.81412   CGCAGAGTAAAAAAA               CCGGCG AGT TGCCGG               TTTTTTTTGCCTGAA 100 60
        cobD  706447 ..  706460 +  -8.1  -3.04461   GGGTCAGATGCTGTT               CCAGC CACT GCTGG                TGTTGCGCCTGCGTC  60 191
 STM474_0670 NONE
 STM474_0671  712892 ..  712913 + -10.1  -3.54653   CGTTCTGATACCAAA           TCGGGCAGC ACAA GCTGTCCGG            TTATCTCCTGGGAAT  77 33
 STM474_0672  713913 ..  713928 + -11.8  -3.14132   GAAAATAAATCACGA              CGGGCG GTCT CGCCCG               TTCATAAACCAACAG  83 51
 STM474_0673 NONE
        ybel  716462 ..  716485 + -13.2  -3.04263   TAAGGTTCATTATCG          TGAGCGGACGG TTG CCGTCCGC-CA          TGTTAAGCGTGCAGT  86 38
        ybeR NONE
        ybeS  719787 ..  719811 +  -4.3   -2.9914   CAATATTTACTTTTT         GCGCTCTCCA CGCCGA TGGAG-GTGC          TATATATCGGCAATG  49 67
        ybeU NONE
        ybeV  721938 ..  721952 + -12.8  -3.62275   ACAGGGGTAGTGAAA               GCGCCG TTA CGGCGC               TTTCGGCTCGTCAAT  95 41
        ubiF  736791 ..  736812 +  -3.7  -3.06686   CCATTTCAATTGTGC           ATACGTTGT ATTG GCAACGTAC            TACTTTATGTAGCAT  45 175
        nagE  746680 ..  746703 +   -11  -5.75342   TCACAGGAAACATAA          GCGGCAGAGGG AAA CCTTC-GCCGC          TTTTTTTTACCGCAA 100 84
        glnS  748542 ..  748558 + -11.5  -5.38951   AAAATACCTTGTCAA              CGCCGCG TTC TGCGGCG              TTTTTTCTCTGCATT 100 68
        ybfM  750358 ..  750384 + -12.2  -3.01712   ATTTTCTGATGTCAG         ATGCGGCAGGCT GCC GGCCTGCCGCGC         TGTTGAGGAACGACC  81 32
        ybfN  750750 ..  750776 + -13.7  -5.07107   ACCCTGCCTTGCCAC         CCACGGGCGAA TGTTT TCCGCCCGTGG         TTTTTTCAGGCTTTA 100 42
        seqa NONE
         pgm  760830 ..  760845 + -10.4  -5.47159   GATATGGAAGAAAAA              GGAGCC TTAC GGCTCC               TTTTTTGTATTAACG 100 46
 STM474_0723  765623 ..  765633 +  -2.6  -3.95724   ATAACGGATTGTTTC                 TTAA ATG TTAA                 TTATATGTTTTTTAT  54 149
        ybfA  774105 ..  774119 + -11.4  -5.60993   CTGAAAAACCGTCAG               CCGCCA CGC TGGCGG               TTTTTTTATGCGCCA 100 52
        phrB  775616 ..  775639 + -13.9  -2.67747   AGGGGCGTGATACAG          GCCCGGTAG CGCAAA CTACCGGGC           ATTCTGCTATCAGGA  86 31
 STM474_0733  778218 ..  778230 +  -2.6  -2.97503   CTGAGAGGCAATAAA                GTGC AGCGA GCGC                GTTGTTATCTGTTAG  42 41
        ybgJ NONE
        ybgK NONE
        ybgl  780759 ..  780781 +  -6.2  -4.19371   TCTAATCAAACCTCC           GGGGCGGGTA AAC TACCTGACTC           TTTATTACCCCTTTC  70 260
 STM474_0737 NONE
 STM474_0738  781877 ..  781887 +  -2.6  -4.43272   ATCATATCAAAGAAT                 TAAA TCC TTTA                 TTTTACCTTTTGAAT  60 297
 STM474_0740  782376 ..  782386 +  -6.8  -3.34222   CGCAGCGTTGTTCAG                 CCTG TAC CAGG                 TTCTGACGTACTGAT  61 1
 STM474_0741  783596 ..  783608 +  -2.7  -4.78107   ATTATGGTGCACGTT                TATGG TCC TCATA                TTTTTCATACTGATA  68 479
 STM474_0743 NONE
 STM474_0744 NONE
 STM474_0745 NONE
 STM474_0746 NONE
 STM474_0747 NONE
 STM474_0748 NONE
 STM474_0749  793124 ..  793143 +  -5.7  -2.60079   AATCATTATTGGGCG            CTC-GCCC GACAA GGGCTGAG            TCGATTATGCCCTGG  50 67
 STM474_0750 NONE
         nei  794177 ..  794193 +  -2.9  -3.54543   TGGCGCGACGCTTAT              CAGCCCT ACA AAGGTTG              TTTGGGCGCATAGGT  48 75
 STM474_0754  797002 ..  797012 +  -5.4  -4.95758   CCCCATAACTTTTAC                 GCAT TAT ATGC                 TTTTTCTGGTGTCGT  78 33
        sdhC  797771 ..  797784 +  -3.1  -2.78384   CGTGCTTTCACTTCT               CGCAGG AGT CCT-CG               TATGGTAAGCAACGC  43 4
        sdhD NONE
        sdhA NONE
        sdhB  800958 ..  800978 + -14.1  -2.55351   ACAAGTGAACCCCGG            CACGCATAC AGC GTATGCGTG            GTTAGTATCCACGGC  87 351
        sucA NONE
        sucB  805232 ..  805245 +  -6.7  -2.81464   AAGGCGTTCACGCCG               CCATC CGGC GATGG                TGTAATGCCTGATGG  55 77
        sucC NONE
        sucD  807407 ..  807425 + -11.7  -5.33866   GTTTTCGACATGGTT             GGCCACC TTTAC GGTGGCC             TTTTTTATGGCTTTA 100 75
 STM474_0763  807985 ..  807998 +  -3.1  -3.58329   TTGACACTATTCGTT               CGTGA TTAA TCATG                TTTAAAGGATATTTA  51 287
        cydA NONE
        cydB NONE
        ybgT NONE
        ybge  812230 ..  812255 +  -9.1  -4.82154   AAACCTCCTTAAAAA         TATAGGGGCTT GCAT AAGCCCATATA          TTTTTACTCTCCCTT  90 46
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB NONE
         pal  817232 ..  817243 +  -2.2  -2.52896   GGTTTACTAAGAGAA                TTGC ATGA GCAG                 TAACTTCAGACATCA  39 31
        ybgF  818026 ..  818073 + -14.3  -3.15579   TTAACGCGATGTAAT GCGTACCATGCGACCAGAAAA CGCCTT TTTTCTGGTCGCGTCGTGCGA TTCCTAAGCAGTTGA  95 27
        nadA NONE
        pnuC  821507 ..  821523 +  -4.3  -3.06501   GTGTACGTTGCGGAC              TTCGGGG ATT TCCCGAC              TTAAATGGCGCTGTA  47 256
        aroG  824124 ..  824151 +  -9.9  -3.06315   AGGATAGAAAACATA        TTGGTCCGGTA ACAGCC TACCGGACCGG         TATTACCAATATTAA  71 69
 STM474_0788  826749 ..  826760 +  -5.8  -3.63627   TAGCCTCTATATCTT                GCCT GGCA AGGC                 TTTGAGGTATCCAGG  60 175
 STM474_0790  829091 ..  829101 +    -4  -3.77832   GCCTGATATTACTTT                 TCTA TTT TAGA                 TTATTAAATTTGAGA  55 42
        dcoC NONE
 STM474_0792 NONE
 STM474_0793  832501 ..  832559 +  -9.9  -2.62396   TCCCGGAGGCGGCGC -GTTGCGC--CTGTCCGGGCTACCGGATT GCATG GATCTG-TAGCCCGGACAGATGCGCAGCA TCGTCTCCGGGAATG  68 52
 STM474_0794  833454 ..  833471 + -11.3  -3.40481   TGTCAGCAGCCTCAA             GCGTGGA TGGC TCCACGC              TGTCTTTGTCTATGG  83 188
 STM474_0795  834727 ..  834757 +  -4.7  -2.52834   TTTTTAAGCATTGTA      TTGCGACATCGGGG GAGT CTCTGATG-CGCGG       GTTAATGCTCCGCTC  46 2
 STM474_0796  835546 ..  835591 + -18.6  -3.29511   TATTGCCTGATGGCG CTGCGCTTATCCGGCCTAC CCATTGCTC GTAGGCCGGATAAG-GCAG TTATACCGCCATCCG 100 45
 STM474_0805  844773 ..  844790 +  -9.8   -5.1356   GCTGATTTCCCCAAA             CGCCCG CTCAGT CGGGCG              TTTTTGTTACTCAAG  93 36
        modA NONE
        modB NONE
        modC  847657 ..  847671 +  -6.4  -3.95456   CGCTTCTATCCACTG               GGTAAG GCG CTTGCC               TTTACTGTTGCCTTT  65 230
        ybhE  849519 ..  849547 + -17.4  -3.87815   CTTGCAGTAAAACCA        CGGGCCGCCACA TCTGC TGCGGCGGCCCG        TTTATAAGCCTGAAC 100 114
        hutI NONE
        hutG  853238 ..  853252 +  -2.1   -3.3382   GCTTGGCTGGCAAAT              CGCGCA CTGG TG-GCG               TTAATCTGTCATCCG  45 7
        hutC  854106 ..  854123 +  -7.1  -3.08176   TTCTATTCTTGTGCT             TACTTGT ATAG ACAAGTA              TATGTCTGATTCTTA  60 105
        hutU NONE
        hutH  857458 ..  857489 +  -8.6  -3.53444   GGAGCGGCGCTTATT      CGGCTTACCCAACC CGTT GGCAGGGTAAGACG       TTTACGCCGCCATCC  71 53
 STM474_0818  858078 ..  858111 +  -3.8  -3.14211   ATGTTTCATTGTGTA     CCGCGTC-ATTGACC GCCTG GGTCAAACGGCGCAG     TTGATCCGGACGAAT  45 97
        bioB NONE
        bioF NONE
        bioC NONE
        bioD  863061 ..  863080 + -12.2  -4.13561   AAAAACTGCCTTCTT            GCAGGATC AGAC GATCCTGC             TGTTTTTTCGCCAGA  93 49
        uvrB  865727 ..  865751 + -10.7  -4.17089   ATGTGTCGATCGCCA          GCGAGTCATCG TTA CCATGGCTCGC          TTTTGAGAATTTCAG  88 43
        slrP  868527 ..  868554 + -13.6  -3.40403   CAGAAGAGGGAGAGA        GCCTGTTTAC-CC TTC GGTGTAAACAGGC        TTCTGATAAGCGCAG 100 56
        moaA  870882 ..  870896 +  -2.8  -2.76492   TTACATTGGCGGTTA               ATCCTT AAT AAGGAG               ATTTCAGATGAGTCA  41 25
        moaB NONE
        moaC NONE
        moaD NONE
        moaE  872604 ..  872623 +    -5  -3.53091   GTTGGTAGCAGAATG            TGATACGC TTTA GGGTATCA             TTTCCACACAGGAGT  56 33
        ybhL  873368 ..  873386 + -10.3  -5.76949   AGCGATCTCTTAAAA             TCCTGGC CCTGC GCCAGGA             TTTTTTTTAGGACTA 100 45
        ybhM NONE
 STM474_0834 NONE
 STM474_0835  875724 ..  875758 +  -8.6  -3.64703   CCCATCGCCATCCAG     TTCGCGCTGGAG ATCGCCATCTG CGCCAGCGCGAA     TTTCCATGACGGCAG  68 347
        ybhQ  879298 ..  879308 +  -2.4  -3.53091   GTCGCGACAATCAGC                 GCCG GCA CCGC                 TTTACCAACGAAAAT  47 417
        rhlE  886372 ..  886385 +  -2.3     -3.54   CCGCCCCTGAAATGT               GACAC AATA GTGGC                TGTTTATACAGTACT  47 192
        dinG  888540 ..  888553 +  -9.5  -3.24747   AAAGCAAAACCTGCA               CGCCG CCGA CGGCG                TTAATGCTGTGAGCA  72 8
        ybib  889833 ..  889868 +    -6  -4.41844   TAGCTTCCAGGCCAT    CCAGCGTGGTGGC-GCC ATC GGCAGACACTACGCCGA    TTTTATGCAGGTTTT  73 297
        ybiN  892162 ..  892175 +  -2.3  -4.11692   TGGTGACTAAGTCGC               CGGTA TTCA TCCCG                TTTTCAAACTGAATA  56 522
        ompX  899333 ..  899350 +  -9.1  -5.81412   GGTGAAAATGAAAAA             TCCGCCT TTCG GGGCGGA              TTTTTTTTGCCTGAA 100 48
 STM474_0860 NONE
        ybiR  903338 ..  903361 +  -7.4  -4.15106   CACCTCAATGTAACG          GCTACCGTCCG GCT CGG-TGGTGGC          TTTTACCGGTTCATC  74 249
        ybiT  905896 ..  905928 + -15.7   -3.0263   ATCGAGTAAGTTATT      GTCTGTAACCCCGAT AGC GTCGGGGTTACAGAA      TGTTAACAAGGTAAT  93 32
 STM474_0864  907271 ..  907291 +  -4.8  -4.07568   TGCCCCGACTCTCGT            TAAAGTGT AAACG GCACTTTA            TTTTCCAGCACCGCC  63 55
        suph  910537 ..  910550 +  -8.1  -3.04144   CCCTTCTGATTAACA               GGCCT GCGT AGGCC                TGTTAAACGTAGCGC  62 32
        ybiK NONE
        yliA  919216 ..  919227 +  -7.2  -3.36492   CCGCTGCAGGATAAT                GCGC TCTC GCGC                 TTATAACATTCAGAC  63 8
        yliB NONE
        yliC NONE
 STM474_0876  923132 ..  923143 +  -5.8  -3.54424   GCAGCCTACACGATC                GAGG CGCG CCTC                 TTTCAGGAAGTCGAG  57 458
 STM474_0878 NONE
        bssR  925089 ..  925119 +  -7.6  -2.87683   TTACTAAAAAATCAC       GGAGGGAATGAC CCGGGTT GTCATGCTCTCC       TATATGCCAGCCTGT  59 385
 STM474_0880 NONE
 STM474_0881 NONE
 STM474_0882  927851 ..  927861 +    -4  -3.31461   TAAAGAGGGGGGGCG                 TTCT GCC AGAA                 TTATGGCACTGGCTC  50 189
 STM474_0883  929495 ..  929507 +  -4.9  -4.59212   CCATTTCATCTGTTT                TATCA CTA TGATA                TTTATTTCATTGGTT  73 376
 STM474_0884  931443 ..  931466 +  -6.1  -4.41047   ACGGGATGCAGCAGA          GTGAGGCATT ATACC AATGCC-CAC          TTTTGCTTCAACCAT  73 190
 STM474_0887  933964 ..  933976 +  -6.9  -2.71791   CAGCGTTCCAGATTC                GGGCG CGG CGTCC                ATTTCAGACCCACGT  52 98
        dacC  935965 ..  936004 + -17.2  -3.18383   GGTTCTCGTAAAATA  AC-TCCGTAGCCGGGTGCG CGT CGCATCCGGCTACGGGCGG  TTAATACATCAGAGT 100 30
        mdfA  939478 ..  939488 +  -8.2  -4.10161   CGATGATAATACATT                 GCCG CAA CGGC                 TTTTAACGCATCGTC  77 515
 STM474_0895  942207 ..  942231 +  -2.1  -2.91276   CACCACCGGTACCAG         GCTGA-CGAC AAGCCC GGCGATCAGC          ATTTGTCCGCCGACC  40 379
        ybjM  944669 ..  944681 +  -5.5  -3.56704   ACGGCAGATGAAAAG                CAGGT TAC GCCTG                TTCCTTTGATAACCC  57 391
        rimK NONE
        ybjN  947314 ..  947336 +  -8.4  -3.48617   CCTTCCGATAATCAG           GCAGTCGC TGCCAGC GCGGCTGC           TGTTTACACTTTTTT  71 43
        potF NONE
        potG NONE
        potH NONE
        potI  951816 ..  951834 + -11.7  -3.08032   ACTATGGCAATGCGT             TGCCGCG CGGGT CGCGGCA             TCATTTTCAGGGAAG  81 58
        ybjO NONE
        rumb  953552 ..  953594 + -11.7  -3.10901   ATTTCATAAAAATAA TAAATACAATCAATTGATT ATTTA ATTCAATTGGTTGTATTTA TATATTACCCTATTT  81 74
        ulaA NONE
 STM474_0909 NONE
 STM474_0910  957039 ..  957056 +  -9.1  -3.58343   AGTATTAGTCCGAAT             CGCCTGT TGAT GCAGGCG              TTTGAGACTGATGAC  75 88
        ybjq  962218 ..  962233 +  -3.2  -2.65264   AACGGCGGTGAAAAC              GCGC CGATGAAA GCGC               TACTGTGGCTGGTGG  42 16
 STM474_0918  963069 ..  963100 +  -6.4  -2.56596   ACGCGGTAAATTTCC      GTGATCGCGCAGCC AGGC GGCGGTGCGCTCAA       TGCCTTCGTCCAGCG  53 40
 STM474_0926  974107 ..  974126 +  -4.2  -5.14965   TCGAGTAATGCATAG            CGGCGGCGA TAC TCGGC-CCG            TTTTTTACTGGCGAT  85 77
        ybjY NONE
        ybjZ  978282 ..  978302 + -12.6  -4.21462   GGCGTTAAATAAAAA            TGCCAGCC GATCG GGCTGGCA            TTTTGCCTCCTGGAT 100 98
        clpS NONE
        clpA  981535 ..  981552 +  -9.8  -5.76633   TCACTGTCGTACAAA             CCGGGC CTTAGC GCCCGG              TTTTTTTGTCTATGG 100 49
      tnpA_2  982242 ..  982262 + -12.5  -3.81557   AGGCGCATCTGAAAA            ACCTCCGGC TAT GCCGGAGGA            TATTTATTTACGCCG 100 106
 STM474_0939  986831 ..  986847 +  -7.9  -4.36914   AATGGACGCAAAAAA              GGCCGGT TAA ACCGACC              TTTTATCCAGCCGCC  79 63
         lrp  993830 ..  993859 + -16.5  -2.75577   TGTTAATCCATACAG       CAACAGTGCCGGG GCAA CCCGGTGCTGTTG        TCCGTTTTAGCATCG 100 82
        ftsK  997969 ..  997983 +  -3.4  -4.18494   CGGTAATCGTGAAGT               GCTGGC TCC GCCGCC               TTTTGAGTAAACCTG  60 1
        lolA  998754 ..  998775 +  -2.3  -3.55254   CGTAAGTAGAGGCGA           TGAGTGAGCA ATC TG-TCGCTCG           ATTTTTCTGATAATA  47 32
        ycaJ 1000269 .. 1000285 +  -9.5  -3.18582   AAAACGTCGCTATTA              CGTAAAC GCG GTTTACG              TTCATCAATACAATC  72 194
        serS 1001677 .. 1001690 +  -9.5  -5.61596   CTCCTCTTCTAAAAA               GCGCC TTCG GGCGC                TTTTTTTATGCCAGT 100 51
        dmsA NONE
        dmsB NONE
        dmsC 1005834 .. 1005872 + -17.5  -3.53811   CAGTTAACGCGTTGA   CGCGCATTCGGCCTGCA GAACG TGCAGGCCGAATTCGCC   TTTAGCCGCCATCAA 100 34
        ycaD 1007338 .. 1007363 + -12.7  -3.95749   ACTGTTCTCTGAATC         GTATGCAGGAC GTGA GTCTTGCATAC          TCTTTGTTTATGTTT 100 40
        ycaM 1009206 .. 1009227 + -11.6  -3.53444   ATCCAGACAGCAAAA           CGGCTACC GTCATG GGTAGCCG            TTTAAAAGCGGGTAA  85 269
 STM474_0958 1011602 .. 1011621 +  -4.9  -5.28826   AAAAGTCATTAAAAA            GGCCCCA CTGATA TGGAGCC             TTTTTTGTACGCTTT  82 40
        ycaP 1017973 .. 1017992 +    -5  -3.70863   ACTGAATGATAAAAC            CGATATTC ACAT GAATAACG             TTTGCCTGATGTCTG  57 142
        serC 1019148 .. 1019168 + -10.4  -5.48623   CGTTTCTTTTTTCAT            CCCCACGG CCAGT CTGTGGGG            TTTTTATTTCTGTTT 100 43
        aroA 1020579 .. 1020594 +  -3.3  -5.33785   TTGTTGATGATTTAA              CACAT TGATTT ATGTG               TTTTTTATAATAGTT  81 120
        ycaL 1021504 .. 1021524 +  -5.3  -3.75629   AACGGTCGCGAGCGT            TGGCGCGTA TAA TGCGCGGCG            TTTACGTTAACGGTA  59 141
         cmk 1022267 .. 1022291 +  -7.2  -3.06696   CGAATTTGTAGTACC         CCCGTTG-CAA AGGA TTGACAGCGGG          TATGTTAAACAACCC  60 48
        rpsA 1024117 .. 1024134 + -14.1  -3.20382   GTAATCAAGCACTAA             GGGCGGC TACG GCCGCCC              TTAATCAATCTCACG  95 111
        infB 1024502 .. 1024516 +  -7.1  -5.42514   TTGAACCCGAAAAAA               GCACC GTCAG GGTGC               TTTTTTCATTTATAC  95 56
        ycai NONE
        msbA NONE
        lpxK 1029740 .. 1029779 +  -3.1  -2.78414   CGTCCCCCAATGCAG CGGCAGTGATGAATTTATG GAGT CATGAAT--GTCATTGCCG  TACCTTTCTCTTTCC  43 41
        ycaQ NONE
        ycar NONE
        kdsB 1032074 .. 1032087 +  -5.3  -4.45077   TCAGTGGCGGCTTTC               TCGTA CCGT TACGA                TTTTCCTCATTTTTC  71 122
        ycbj 1033301 .. 1033333 +  -5.4  -3.98378   TACCAACAGGAAAGG      GGCGTCGCCGATGG CCTGC TTAACGGCGGCGGC      TTCTTCTTCCGTATC  63 245
        smtA NONE
        mukF NONE
        mukE NONE
        mukB 1041354 .. 1041369 + -11.8  -5.42975   TTATCATTAGCCTGG              GGCGGC GAAA GCCGCC               TTTTTCTTTATCTGA 100 137
        ycbb 1043474 .. 1043498 +  -4.3  -3.35679   AATGTTTGGCTTCAA         CGGGGCGTTT CGCTGT AGAC-CCCCG          TTGTGGCTGGGGGAG  52 71
        ycbK NONE
        ycbL 1044925 .. 1044941 + -12.3  -5.28176   AAGCAGAATGAAAAA              GCCTGCA CAT TGCAGGC              TTTTTTATCGGTCAC 100 39
 STM474_0986 1048011 .. 1048027 + -13.7  -3.12999   TCAGGCGAAAAAAAA              GGCCAGC ATA GCTGGCC              TTGAGTGTGACGTAA  87 155
 STM474_0989 1051673 .. 1051686 +  -2.4  -3.74397   TAGATAATAAAGGTA               GCAT GTAAAA ATGC                GTTTTTTATACGCAT  51 59
 STM474_0990 1053622 .. 1053641 +  -3.4  -3.55444   CGCGAGAGGCGAAAT            GGCGATAG AGCT CGACCGCC             TTTGGCAGATCAAGG  49 327
 STM474_0999 1061661 .. 1061685 +  -2.8  -4.52857   AAACGTTGTTCTTCA         GCAGATCCATC TCTT GGAGGA-CTGC          TTTTGTATGGAGGAT  64 104
 STM474_1001 NONE
 STM474_1002 1062753 .. 1062777 +  -6.4  -3.96148   ACTAAAAAGGCGAAA         GCCG-CGGTGA GGGG TCACCAACGGC          TTTCTGGTGCAAAAA  66 52
 STM474_1003 NONE
 STM474_1004 NONE
 STM474_1005 NONE
 STM474_1006 NONE
 STM474_1007 1065733 .. 1065746 +  -9.5  -5.09225   TTTCTTTTATCTGAA               CCCGC TGCG GCGGG                TTTTTTGCCTAAAAT  93 178
 STM474_1008 1066294 .. 1066304 +  -5.4  -3.07113   GGGAATAGAACTTTT                 GTCT TTT AGAC                 TTGCATCAGGTGATC  52 214
 STM474_1009 NONE
 STM474_1010 NONE
 STM474_1011 NONE
 STM474_1012 NONE
 STM474_1013 1068923 .. 1068934 +  -2.2  -3.83568   AATGGCTAATCTGAT                TCCA ACGA TGGG                 TTATTATGCCTGTGA  51 75
 STM474_1014 1069298 .. 1069313 +  -8.2  -5.61881   TTACCAATTTCATTA              GGTCGC TTCG GCGGCC               TTTTTCTTTTTCAGG 100 66
 STM474_1015 1069922 .. 1069938 +  -2.9  -3.71873   CGTTGAGCTGGCTAT              CTTCACT TTG GGTGCAG              TTTCCCTGTGACTGG  51 391
 STM474_1018 NONE
 STM474_1019 1072204 .. 1072217 +  -4.5   -3.3071   CCCGTCGGCGTGAGG               CGGAG CGTG CTCTG                TTCCTGTCATGATGT  52 0
 STM474_1020 1072745 .. 1072766 +  -5.1  -2.53263   TATTAAAAAGGTACT           CCCG-GGC AGGGGGC GCCACGGG           TGGCTTCGGGCTCGC  48 44
 STM474_1021 NONE
 STM474_1022 1075932 .. 1075953 +  -8.6  -3.06183   GATTGCCGGAAAGTC           CCTGCGGG AGCAGG CCCGCTGG            TTCGATAACAATCAC  66 395
 STM474_1023 NONE
 STM474_1024 1079344 .. 1079355 +  -7.2  -5.64274   ACATTAAGCGATACG                GCCC TGAC GGGC                 TTTTTTTATACCTGA 100 55
 STM474_1025 NONE
 STM474_1026 NONE
 STM474_1027 NONE
 STM474_1028 NONE
 STM474_1029 NONE
 STM474_1030 NONE
 STM474_1031 NONE
 STM474_1032 NONE
 STM474_1033 1085893 .. 1085920 +  -5.8  -2.77994   CAGGTTATTTCTTAG        TATTT-TTGATCG AAA CGATCGATAAATA        TGATTGAACTTTCTA  50 26
 STM474_1034 1086541 .. 1086558 +  -8.4  -5.28176   CGATACAGATTTAAT             GCCCTC CAGTGA GAGGGC              TTTTTTATGGGTAAA  95 78
 STM474_1036 NONE
 STM474_1037 NONE
 STM474_1038 1089304 .. 1089318 +  -8.5  -5.05116   AGCTGATACACATGA               CCGCC ATTAC GGCGG               TTTTGTTATTTATGG  91 57
 STM474_1039 1092692 .. 1092709 +  -6.9  -3.05849   AGCAACTTCACAAAC             TGACCGG ATTT CCGGTCC              CTTTCGTTTAATGAG  58 23
 STM474_1040 1092994 .. 1093011 + -10.5  -5.24129   GTGAATGAATCTGAA             GCCTGCC TGCG GGCGGGC              TTTTTTATGGAGGCA 100 44
 STM474_1041 NONE
 STM474_1042 1095835 .. 1095845 +  -6.8  -2.55668   GTTACTGTGGTAATG                 CAGG CCA CCTG                 ATTGCTGTGAAGGTG  55 43
        sseI NONE
 STM474_1045 1098700 .. 1098717 +  -6.3  -4.17132   AATCAATCGCAAATT             GC-GTCGA ATC TCGACGGC             TTTATTCCCCAGTTT  70 59
        pepN 1103103 .. 1103131 + -13.2  -5.40072   TAAAGAGGTAAGACA       TGCCCGGTAAGCG TTAG CGCT-GCCGGGCA        TTTTTTTGCCGGACG 100 53
        pyrD 1104312 .. 1104341 +  -5.7  -4.84918   TTACCCTTTATCAGA       CAACCAGGGCT TTATTTCC GGCGCTGGTTG        TTTTATATTTCTCCA  76 44
        ycbW 1105237 .. 1105252 +  -6.8  -4.05033   GCCAGTCGATGGTTA              CACTCG CGTC CGGGTG               TTTCTCTGGCGTAAC  68 261
        rlml NONE
         uup NONE
        pqiA NONE
        pqiB NONE
        ymbA 1113730 .. 1113756 + -12.3  -6.20267   GGAATGTAAATTTAA         CCGCTTCAGGT CGTGC GCCTGAGGCGG         TTTTTTTATTTTTGA 100 48
         rmf 1114154 .. 1114170 + -13.7  -3.74347   CTTTAGAAAAAGAAA              CCTCCGC AGT GCGGAGG              TTTCGCCTTTATGGG 100 49
        ycbg 1117253 .. 1117267 + -12.8  -5.24129   GACCAGAGCAAAAAA               CCCCGC GAC GCGGGG               TTTTTTATCAGACGG 100 63
        yccR 1120176 .. 1120196 +  -7.5  -3.37959   CTGCTTTAAACCCTC            CAGCGCCTG GTG TACGCGCTG            TTCGTCTTCAGGTTG  61 174
        helD 1124808 .. 1124844 +    -2  -4.41616   GTGGCGAGGAAGCCC    TAAAGCGCGGGCGGTA CAGCA TCCCGCCCGCGTAGCG    TTTATTTCAGGCGCT  59 23
 STM474_1070 1126659 .. 1126680 + -10.1   -4.1899   AATAAAAGTTTAAAT           GGCCGGATA TCGC TTTCCGGCC            TTTTAAATACAATCA  85 36
 STM474_1073 NONE
 STM474_1074 NONE
 STM474_1075 1130205 .. 1130218 +  -4.5  -3.51232   GGCTTGGGCAGACCG               GCGAT TTTG GTCGC                TTGCTTTGCCGGGCC  52 53
 STM474_1081 1134317 .. 1134345 + -11.7  -2.71731   AAGCAGTATTGTCTG        CGTCAGCGCCG ATAGTGA CGGCGCTGGTG        TAGTTCAGACGTAAA  72 157
 STM474_1084 1137155 .. 1137165 +  -2.4  -3.93038   CTCCATCTTATACTG                 CTGC TTA GCTG                 TTTGCTGTTCAAATG  54 440
        hiuh 1141195 .. 1141210 +  -3.2  -4.43911   AGCTAATTTAGAGCC              TATCCC ATTA GGGTTA               TTTTACTTGCCATTT  62 35
        hpaG NONE
        hpaE 1147273 .. 1147290 +  -2.7  -3.83026   CAATGGGCGACCATC             CTATCCCA AAA TGGGG-AG             TTTGATATGGGCAAG  52 3
        hpaD NONE
        hpcD NONE
        hpcG NONE
        hpaI NONE
        hpaX NONE
        hpaA NONE
 STM474_1101 1153616 .. 1153638 + -17.8  -3.68359   GCAGGGATAAACCCA           CGGGCTGACA TGA TGTCAGCCCG           TTATGCTTTTGGCGA 100 49
 STM474_1103 1154968 .. 1154995 + -14.9  -4.30933   CGGGTGCATGTAAAT        CCG-GGGTGGGC AGAAA GCCCACCCTCGG        TTTATTGCCTTTATC 100 28
        scsA NONE
        scsB NONE
        scsC NONE
        scsD 1159887 .. 1159920 +  -4.3  -3.83026   TGGGCAAAAACGTTC     TGAATATGCGCCGGG GTTT CCCGGCGCTAACGCG      TTTACTGTAAGAAAA  58 23
         agp 1161265 .. 1161294 + -15.7  -3.34591   CTGCTGCAAAATAGC       CATATGCCCCCGC GCAG GCGGGGGCGTTTG        TGTTATACGTTTTTA 100 27
 STM474_1113 NONE
        ymdF NONE
 STM474_1115 1162753 .. 1162770 + -14.1  -6.02919   TGTCATGCGCCACCG             CCGCCGG ATTT CCGGCGG              TTTTTTTGTTTATAA 100 45
        ycdC 1163942 .. 1163964 +  -9.8  -3.59979   TTGTCATCAGGCTGG           CATTACCGCC AGC GGCGGCAGTG           TTTACGCTCAGCGAA  77 499
        putP 1169818 .. 1169845 + -12.8  -3.63744   GCGGAATAACCGACA        TGTCCGATAGCA TTAT TGCCATCGGACA         TATTTTACCAGGCGG  95 32
 STM474_1120 1171508 .. 1171531 + -14.6  -3.58905   TATAGCATTGACTTT          CAGAGCCCGG GAAA CCGGGCTTTG           TTATCTATAAAGCAT 100 41
 STM474_1124 NONE
 STM474_1125 1177702 .. 1177720 +  -4.6  -3.28416   GTTAAAGAGTTACTG             TACTAATC TTT GCTTAGTA             TTCATATCGATAATC  52 46
 STM474_1126 NONE
 STM474_1127 1180587 .. 1180599 +  -9.1  -3.28791   TCGTCGTCTGTCCAA                CTGGC TGC GCCAG                TTGTCGAACCCCGGT  71 251
        ycdW 1182150 .. 1182165 + -11.8  -3.64703   GGATATTGATATCAA              CCCGGC GCGG GCCGGG               TTTCGCTAAAAAACG  89 32
        ycdX NONE
        ycdY 1183546 .. 1183584 +  -2.6  -3.07622   AGATGAAGAATAATG  TGATGTAAATCACCCTT AACTGC AACGG-GTTTTACATCA   TTGCATAAAATGTGT  43 28
        ycdZ 1184131 .. 1184151 +   -14  -4.07455   TCACAAAATAAAAAA            GCGTGGGG TTCTT CCCCACGC            TTTGTCGTATTCATC 100 30
        csgB 1187762 .. 1187776 +  -3.6  -4.11216   ATCAATCCGATGGGG               GTTTTA CCA TGAAAC               TTTTAAAAGTGGCAG  57 59
        csgA 1188251 .. 1188266 + -10.4  -5.75342   GCGCTAATAAAAAAA              CAGGGC ATAA GCCCTG               TTTTTTTTCGGGAGG 100 51
        csgC 1188603 .. 1188613 +  -3.2  -4.77036   AACAATGGCCGCCTT                 CTGC ACA GTAG                 TTTTTGATGGTGGCG  69 15
        ymdA 1189058 .. 1189070 +  -3.3  -2.82015   GATGAATATTGAGTA                CCGTT AAC GGCGG                TGTCATAGATATAAA  43 19
 STM474_1142 NONE
        ymdC 1191147 .. 1191159 +  -3.3   -4.0896   ACTACCCGATCGTGG                CGCGA CTT TCTCG                TTTTACCGGCGGTTT  57 56
        mdoG NONE
        mdoH 1196660 .. 1196678 +   -11  -4.91511   GAGTGAGGTGAAAAA             TACCGGCG TGA TGCCGGTA             TTTTTATAGTGAAAT 100 55
        ycek 1196954 .. 1196966 +  -6.2  -2.52015   TCATCCCATTCGTCT                GCCG CAGTA CGGC                CTTCCTCGGTATCAA  53 48
        ycea 1200955 .. 1200988 + -22.6  -3.53761   GGCTGAGTAATATTT     TGCCGGATAGCGGC GTAAAG GCCGCTATCCGGCA      TTTCGCCAGGCGTTA 100 31
 STM474_1154 1202782 .. 1202798 +    -5  -2.52464   GCCCCATGTAAACAA              CCGCCG ATACC CGGCAG              TACGTTACGCAGGAA  46 448
        rimJ NONE
        yceH 1209899 .. 1209912 +  -2.3  -2.62515   TGGATTCTTTGTTAG               CTCAC CTGG GAGAG                TAATGTGAGAACATT  39 9
 STM474_1165 1211071 .. 1211081 +  -3.2  -2.59881   ATACAGCCGGATACG                 GCAG AAG TTGC                 GTTATCCGGTCGATG  42 256
        mviN 1212918 .. 1212930 +  -3.3   -5.1101   TGCTGGTTGAGGTCG                CGAAG ATG CTGCG                TTTTTTCGGTAATCG  76 264
        flgB NONE
        flgC NONE
        flgD NONE
        flgE NONE
        flgF NONE
        flgG 1218736 .. 1218767 + -11.4  -3.09004   GACGCAACTCTAAGG      GGCCGCCGGTGGGG GATA CGCCACCGGCTCCC       TGATTTTGAAGATGA  79 28
        flgH NONE
        flgI NONE
        flgJ NONE
        flgK NONE
        flgL 1224283 .. 1224311 + -14.6  -5.55664   TGGATATGTTTTGTC        TGCCCGCGCC ATCCACCCC GGCGCGGGCA        TTTTTTTAGTCGTCA 100 69
        rluC 1229238 .. 1229264 +  -7.2  -2.81535   CGCAAAATAGTTCCT         CTTTCGGGCAGG TTA TCTGCCCGAATC         TCACTTTTCTCATAA  58 31
 STM474_1184 1230613 .. 1230631 +    -3  -4.29106   TTAGCGGTATTTGAA             AAGCCTAC AGA GTAGGCCG             TTTATTGCTGTAGCG  58 507
        yced NONE
        rpmF 1232191 .. 1232202 +  -5.8  -2.62184   ATGCCTTTTGCATCA                CAGG CGTG CCTG                 TGGTGTAAAAGCCGA  50 55
        plsX NONE
        fabH 1234383 .. 1234393 +  -2.4  -2.92669   GGGTGGATTCACCTG                 GGGC TCC GCGC                 TGATTCGTTTCTAGT  41 1
        fabD NONE
        fabg 1236219 .. 1236232 +  -2.3  -4.25848   TACACTACGAAAACC               ATCGC GAAA GCGAG                TTTTGATAGGAAATT  57 145
        acpP 1236500 .. 1236526 + -13.1  -5.02287   GGCGTAAGTGAACAT        CTCCAGGCGGTC GTTC GACCGCCTG-AG         TTTTATCTTTTTGTC 100 34
        fabf 1237848 .. 1237864 +  -7.2  -5.24531   AGACATTAATAAAAA              GGTCCG CTTGT CGGGCC              TTTTTTATCAGGCAT  91 55
        pabC NONE
        yceg NONE
         tmk NONE
        holB NONE
        ycfH 1242218 .. 1242236 +  -8.2  -2.77899   CATCAATCCGTTAAA             CGAGTTTT TTT AAAGCTCG             TAATTAATAAACAAA  60 27
       ptgcb 1243971 .. 1243988 + -12.7  -5.14965   GTTGGGGAGAATTAA             GGCAGCC ATTC GGCTGCC              TTTTTTAATGGCGCT 100 52
        ycfF NONE
        ycfL NONE
 STM474_1204 NONE
        thiK NONE
        nagZ NONE
        ycfp 1250380 .. 1250395 + -10.4  -5.67063   TCAGTGACCGGATAA              CCAGCC TTGC GGCTGG               TTTTTTTATGCTCAA 100 64
         ndh 1251908 .. 1251939 + -13.8  -3.36878   TGCATTAATTTCTCT      GCGTCTCACCGGC TGCTCGC GCCGGTGAG-CGC      TTCTCCATCACTCGC 100 33
        ycfj 1252641 .. 1252667 + -10.1  -5.93809   GTACTCTGCAAGTTA         GCCCCTCATTC GCTCA GGCTGAGGGGC         TTTTTTTTATCCGAA 100 48
        ycfR 1253877 .. 1253898 + -15.9  -5.28176   CAATAAAAAGAAAAA           GCCTCGCGA TGCA TCGCGAGGC            TTTTTTGTCGGTCAG 100 75
        lolC NONE
        lolD 1260708 .. 1260731 +  -3.2  -3.83675   GAGCCTGATGGGGGC          TGAGTAATGGC GTC GCCTTTA-TCA          TTGTTAATTGGCTTG  53 19
        lolE NONE
        ycfX NONE
        cobB 1263864 .. 1263883 +  -3.4  -4.11394   ACTCTTCATAAATGG            CGCTGGCG TCGC CGACATCG             TTTTGCCACTCGCCT  58 151
        pepT 1270823 .. 1270850 + -13.6  -5.03994   TGAAGCGTTTTATTA        TTTATGGCGGGA TATT TTCCGCCATAAA         TTTTTGTCTATGGAA 100 60
      tnpA_2 1271538 .. 1271558 + -12.5  -3.76888   AGGCGCATCTGAAAA            ACCTCCGGC TAT GCCGGAGGA            TATTTATTCTGCCTG 100 106
 STM474_1226 1272842 .. 1272870 +  -8.8  -2.71074   GTTGTGGATAGTTTG       CGTCA-GCCCGGC GGTC GCCGGGCATTGCG        ATGTTCTTATCCTTC  64 30
        icdA 1282508 .. 1282538 + -12.7  -3.82084   GATAATTGTTAAAAA       CAAAAACGGGGAC TTAAC GTCCCCGTTTTTA       TTATTAGTATTCGAA 100 45
 STM474_1237 1284126 .. 1284136 +  -6.8  -4.91194   TACTTCTTGAGGTAG                 GCAG TAA CTGC                 TTTTATATTTATTAT  82 91
        pagC 1290128 .. 1290149 +  -2.1  -3.49516   GTGCGAGGTTCGAGG           CCTCGGTGG CGGT CCAATGTGG            TTATCGTATAATGTT  47 492
 STM474_1248 1291786 .. 1291810 + -12.8  -2.64354   TCATATCTTCAGGTA          TGGCGCCCGG AGCCG CCGGGCGCAA          ATTGTAGGTGTATAA  81 66
 STM474_1250 1292312 .. 1292328 +  -6.5  -3.38361   CCTATGTAGTCAGTG              GACAAGC AAT GCTTGCC              TTGATGTTGAACTTT  59 120
 STM474_1251 1292843 .. 1292874 +   -16  -2.87211   AAATCATAATCGCGT      TAATGGAGGCCCGT TTAG ACGGGCCTTCATTG       TCTGTAGCGAAAAGT 100 32
 STM474_1252 1294621 .. 1294631 +  -2.4  -3.76586   GGGGAGGCGTAATGA                 CCGG ATC CGGG                 TATTTGTGTTTAAGA  50 428
 STM474_1255 1297608 .. 1297625 +  -2.7  -2.62111   ACCTGGACCTGTCGG             TGATGAA ATTG TTCTTCA              GTCATTTTTTGCGGC  40 23
 STM474_1256 1298564 .. 1298579 +  -5.4  -2.82516   CTTAATCGATCGCTG              GAGCGT CCCG ATGCTC               TATAATCCTGCCCCG  50 5
 STM474_1257 NONE
 STM474_1258 NONE
 STM474_1259 1300804 .. 1300825 + -15.9  -3.21276   GTCGCCGTTAACGCA           CCGGGAACC CATG GGTTCCCGG            TATTGTCGGCAGAGA 100 68
 STM474_1261 1302603 .. 1302621 +  -4.4  -4.20368   ATCAAAAAAGGCCAC             CTGCGCGG TGG CCGCTGAG             TTTCTGTTGAAATAA  64 132
        yodA 1303361 .. 1303380 + -12.2  -5.63504   ATTGCAATGTTAAAA            GCTCGCTA TGAA TAGCGAGC             TTTTTTTCTGCCGTT 100 46
        aadA 1304301 .. 1304323 +  -2.8  -3.21395   CTACTTAATAGGTTC          TCATC-GCT GAAGTA AGCAGATGA           TCTTATGCGGGCCAT  45 89
 STM474_1266 NONE
 STM474_1267 1305914 .. 1305939 + -11.1  -4.07455   TGCATTATTAACGAA         CAGGGGAGGAG TAAA CCCCTCCCTTG          TTTATACTCTTCATA  86 47
 STM474_1270 1307233 .. 1307247 +  -3.4  -3.06183   GGCAGCCTTATCTTT               GGTGCG ACG CGCGCG               TTAACTCCACATGAG  45 7
        yeaS 1308094 .. 1308115 + -13.7  -2.60725   AGTCTTAACCACCTG           GACCCGTCG TCAA CGGCGGGTC            ATTGCTCTCCTTTCG  86 33
        yeaR NONE
        yoaG 1308854 .. 1308882 + -13.9  -4.74706   TTTTTAAATCAGAAG        CCGCATCGCGC GTCGCCA GCGTGATGCGG        TTTTTGCGTATTGAA 100 74
 STM474_1274 1309788 .. 1309824 +  -2.9  -3.15861   ATGTGAGCAATGTCG    TACCGAACAGGTGGGTT ATA AACTCAACCACTCGGTA    TTGATAAAGATAATC  45 137
 STM474_1275 NONE
 STM474_1276 1310261 .. 1310285 + -11.6  -3.63694   AACTTTCAGAGATAA          TAAAGGCTAC GACAG GTAGCCTTTA          TTATTCAAAATGAAT  87 47
        yaoF 1310971 .. 1310989 +    -6  -2.57581   CAATCTGATAATGAG             TTTCATGC GGC GCAAGAAA             ATATGTTTCAGTTAA  53 73
 STM474_1279 1311654 .. 1311669 +  -3.2   -4.4009   TTCCCTCCTGTGATG              GTGTCG CTTA CGGTAC               TTTTGTCGGATAGCG  62 376
        yeaM 1313905 .. 1313937 +   -12  -3.60296   ACGCCAAGTACCGTA     CCGACCAGCAGCCCG GCGA CGAGCTGC-GGTTGG      TTTCCCATCAGCGTA  81 96
 STM474_1284 1315060 .. 1315079 +  -3.5   -3.1634   ACTAAACGTTGGTGT            GTAGCGA CACCCT TCGCGAC             TTCAGTCATTTCGGC  47 512
 STM474_1289 1320766 .. 1320776 +  -6.8  -3.68222   AAGATTAACGTGTCC                 GGTG ATA CACC                 TTCTTAACATTAAGC  64 122
        mipA 1321817 .. 1321841 + -12.9  -2.69151   CCGGAAAAACCACGA          CAAAGCCTGCG TTA TGCGGGCTTTG          TGCTGTCTGAAACGC  84 54
 STM474_1291 1323322 .. 1323334 +  -3.3  -3.41798   CGGACATTACCGTAG                GGTCT AAG AGTCC                TGTATTGTTTTACCG  48 73
 STM474_1292 1324242 .. 1324288 +  -8.8   -2.7752   GACGCCGGATAAAAT GTGTAAGCGCCGCCATCCGGCA GGTCA TGCCTGATGGCG--GCTGACGC CTTTCAGATCCTATA  64 39
        yeaA NONE
        yeaC 1327638 .. 1327651 +  -9.5  -3.91084   CCGGATAAGAGGTAG               CCGCC ATCC GGCGG                TTTCATTGCCAATGC  81 47
 STM474_1300 1332357 .. 1332401 +  -3.6  -2.71731   TGACGCTGAGGGATA AAACTGTCTGGATT-CTGAGC AAAG GCGCGGTAATTCAGACAGTGA TACTTACCACATCAG  43 38
        selD NONE
        topB 1335705 .. 1335722 +  -9.8  -3.53012   CCCCGATGTCGCCAC             GCCGCC CGCGTT GGCGGC              TTTACCCGGCGCAAA  71 271
 STM474_1304 1337375 .. 1337396 +  -4.3  -3.03124   CGGAATATCCGCCGG           GGCG-AGGGG GTA CTCCAGCGCC           TCTTCCGGCGTACAC  47 54
        argD NONE
        astA NONE
        astD NONE
        astB NONE
        astE 1345081 .. 1345111 +  -7.6  -2.90496   CTGCCCTGATAAATG       TCCCTGTAAGCTCA CGT TAGGATTACAGGGA       TGATTTGGGACACAG  59 32
         spy 1345915 .. 1345963 + -11.7   -5.0065   CCGCATAATTTAAGA CCGCCGGTCTTGTCGACAACA CAATCGT TGAGGTGGACAGGATCGGCGG TTTTCTTTATGACTG 100 45
 STM474_1315 NONE
        osmE 1348391 .. 1348406 +  -7.5  -5.64274   GAACATTCAAGGAAA              CCGGC CTGCGA GCCGG               TTTTTTTGTGCCTGC 100 57
        celA 1349025 .. 1349043 + -11.8  -3.38603   TATTTCATACACTAA             CCGCAATA TTT TATTGCGG             TATTTAAGGGTATTT  85 70
        celB NONE
        celC NONE
        celD 1351716 .. 1351737 +  -2.2  -4.15044   TCACGCTTGCCCCAA           TAGCGCGG GGAACG TCACGCTA            TTTCTTACGAGCGGG  55 69
        celF NONE
        chbg 1353934 .. 1353955 + -15.9  -5.34055   TTTAGCTCCTGAGTT           TGCGGCGCA AGAA TGCGCCGCA            TTTTTTGCTGTTTAT 100 36
        cedA 1356839 .. 1356859 +  -9.7  -4.72272   TAAGAAAAAACAAAA            CGCCGGT ACTGGAG ACCGGCG            TTTTTAGTGACAGAC  91 38
        ynib NONE
        ydiY 1363930 .. 1363952 + -17.8  -3.69395   AGATGTAATATTGTA           CCGGGTTACG TTA CGTAACCCGG           TTATTCCGTGGTGAC 100 33
 STM474_1334 NONE
 STM474_1335 1366281 .. 1366293 +  -6.3  -3.83998   AACGGAGAAACCCTG                TCAAG GGT CTTGA                TTTGCTATAGAGTGA  64 68
        thrS NONE
        infC 1371547 .. 1371572 + -14.1  -3.11325   CCTTCAAGTAACAAT         TCTGTGAAGCC TTCG GGCTTCACAGG          CTTTGTTCGCCTATG  89 43
        rpmI 1371826 .. 1371840 +  -2.9  -4.87291   CCGTACGCATAAGCC               GTTAA CGTTT TTAAC               TTTTTAATTAGAATA  68 29
        rplT 1372239 .. 1372261 +   -12  -4.99568   GCATAAGCCAGTGAA           AAGAGGGAGC CTG GCTCCCTCTC           TTTTATTTACTGTTC 100 35
        pheS NONE
        pheT NONE
        ihfA 1376342 .. 1376356 + -12.8  -5.64421   CCGTATAACTAAAAA               GGCCGC ATT GCGGCC               TTTTTTCTTTCAAGT 100 146
        btuC NONE
        btuE NONE
        btuD NONE
        nlpC 1379395 .. 1379409 +  -4.3  -2.71744   CGCCGGTTGAACTTA               TGACA TCTGT TGTCA               TCATATATAATGATA  47 83
        cdgr 1380413 .. 1380436 +  -3.1   -4.2679   ACCGTCTACACTGAA          GACAGGAGGC CCTAT GAC-CCTGTC          TTTTACTGCCCGTTG  60 74
        ydiu 1381893 .. 1381905 +  -5.5  -3.91084   AGCAGCATCGTCTGC                TGGCG GAG CGCTA                TTTGGTTAACAGTAG  63 50
 STM474_1353 1384458 .. 1384472 +  -9.2  -2.72511   GTTATTCAGGGAATG               CCGTGC TAT GCGCGG               GTTTGCGCAACTACG  66 176
         pps 1387006 .. 1387041 + -15.4  -3.86524   TGAAGAAGTAGTGTA    ATACCGGATGGCGGCG TTAA CGTCGCCATCCGGCAA     TTTATACCGCAGTGT 100 30
        ydiP 1393963 .. 1393973 +  -6.8  -3.14564   CGGCGAAACCTGTAC                 TGCG CGC CGCA                 TTAATCAAACGCTCC  54 508
        ydiJ NONE
        ydiI 1406865 .. 1406894 +  -2.8  -2.74144   GCTTTTGGTCAAAAT       GTGCGCAGAAAA AGGTGA TATACTGTGCAC        GTTTACACATAAGCG  41 71
        ydiH 1407337 .. 1407367 + -12.7  -5.45802   CGGATGGGGCCGGAA       CCCTTAAGCCTGT ATTGA ACAGACTTAAGGG       TTTTTCTTTTCCGGG 100 256
        sufA NONE
        sufB NONE
        sufC NONE
        sufD NONE
        sufS NONE
        sufE 1414740 .. 1414764 + -13.7  -3.60952   GTCGGACGGCGACGT          CGCTTTATCCA GAG TGGATAGAGCG          TGTATTTTGTTATTC 100 79
        ynhg 1415871 .. 1415889 + -14.6  -4.74285   CGACGGACAAAAAAA             TGGCGCAC GAT GTGCGCCA             TTTTATATTGTGCGT 100 54
        ttrS NONE
        ttrR 1430595 .. 1430610 +  -4.8  -4.93877   AAACCGCGTTATTTC              TTTGAT TTGC ATCAAA               TTTTGTTTAATAGAG  77 46
        ydhz 1431202 .. 1431213 +  -4.4  -3.39216   CTGGATATGCATCAG                CACA TTGG TGTG                 ATTTTTACGTGAAGC  52 343
 STM474_1395 1432268 .. 1432279 +  -5.8  -3.32963   CGAGGGAAGCACATT                GAGC CGCA GCTC                 TTGTCCGGTACGAGT  56 291
        ssaB NONE
        ssaC NONE
        ssaD NONE
        ssaE 1440228 .. 1440240 +  -5.5  -3.53444   CCCACCAGGCGTTAA                TTGGC GCA GCCAG                TTTGGACACGGATAG  57 64
        sseA NONE
        sseB NONE
        sscA NONE
        sseC NONE
        sseD NONE
        sseE NONE
        sscB 1444826 .. 1444839 +  -3.9  -3.05384   AATAACAGAACGAAA               TATGA AAAT TCATA                TTCCGTCAGCGGCAA  47 40
        sseF NONE
        sseG 1446302 .. 1446317 +  -3.2  -3.32516   CCGGAGTAATCGTTT              TCAGGT ATAT ACCGGA               TGTTCATTGCTTTCT  48 32
        ssaG NONE
        ssaH NONE
        ssaI NONE
        ssaJ NONE
 STM474_1416 NONE
        ssaK NONE
        ssaL 1450082 .. 1450104 +  -3.4    -2.882   TGAAGTAAAGATAAA           TCAGGTTTTA TTC TGATACCTGG           CTTTCAATATTTAGG  44 10
        ssaM NONE
        ssaV NONE
        ssaN NONE
        ssaO NONE
        ssaP NONE
        ssaQ NONE
        ssaR NONE
        ssaS NONE
        ssaT NONE
        ssaU 1458797 .. 1458811 +  -7.8  -3.21276   AAAATAGCCGCCATG               CGACGG CTA TCGTCG               TATTATCGCGCAGCG  64 481
        ribE 1461057 .. 1461083 +   -13  -2.70932   CTAACGGAAAATAAG         ATTCCCCCGCAT GAA ATGCGGGGGAGA         TGATTAGCGAGGAAC  85 37
        ydhB 1465210 .. 1465223 +  -9.5  -3.05844   CATAAAGCCTGCCAG               CCGGC CCGC GCCGG                TGTTGCGCTCCAGCG  67 460
 STM474_1440 1468493 .. 1468510 + -11.3   -5.0133   CTGTGCAAGGAGAAA             GCGACCT GTAA AGGTCGC              TTTTTTACCGCCATC 100 42
        ydhL 1471906 .. 1471918 +  -4.1   -2.5333   TACTCAACCTCATTA                TTCTC TAT GAGGA                ATCTGTTATGGTTCA  44 56
        ydhF 1472840 .. 1472896 +  -2.4  -3.22113   GCCAACTCGTTGACT TTCCG-TACATGTTTTCGCCAGT GGTTTACACTTA ACAGGCGACCACATGTAACGGAG GTTTTATGAAGCGAT  44 43
        sodC 1473536 .. 1473552 +  -8.7  -2.95521   GATGATGATGTGCGA              GCGTGTC GCA GATACGC              TGTAGTTCCTGTAGC  62 138
        slyA 1477181 .. 1477215 +  -9.3  -2.92613   CGATTGAGGTGCAGG    GGCAT-ACGTGTGGCC ATGT GACCACACGTAAAGCC     TGGTTTAGCGTGGAG  67 34
        anmK 1479071 .. 1479084 +  -2.4  -3.33744   GGCTAACCCAATAAC               TCAG AGTTAA CTGA                ATTTTTCCCGGACCC  45 16
        mliC 1479503 .. 1479537 +  -6.4  -4.11183   GAAGCGTTGAGATTT    TCAGTATGGGGGCGC ACAATA GCGCCACCC-ACTGA     TTATTTCTGATCAAC  68 31
        pdxH 1480243 .. 1480256 +  -8.1  -2.57982   GTTTTAAGCACTGGT               GCGGA TGAA TCCGC                CGTTTTATGCTATGT  59 56
        tyrS 1481628 .. 1481647 + -12.2  -4.53398   AGGCATTAAGTAACA            GGGAGTGA GAAA TCACTCCC             TTATTTTTGATGTTC 100 40
        pdxY 1482618 .. 1482633 +  -3.2  -3.90048   CTTCCGCTTTAAGCG              CTG-CCG CAA CGGTCGG              TCTTTTTGCGACACG  54 110
        ydgJ 1494368 .. 1494380 +  -4.7  -4.71061   CCTCGGCCACTTTTT                CGCGC AGC GCACG                TTTTTCGCTATCGCT  71 120
        fumA 1500683 .. 1500714 +  -9.4  -3.28785   GCGCGCTGCGTTAAG      TAATGTCGCCGCCC TGCG GGGCGGTAACATGA       TTCGCTATTTTGCCG  74 23
        fumC 1502586 .. 1502605 +    -7  -5.44119   CGTCCACGGCGGGAC            GCTGCGCG GCGA CGCGAGGC             TTTTTTTCAACTGGC 100 355
 STM474_1483 1509354 .. 1509393 + -12.4  -3.28712   TGGCAAAGACCGTGG  TTTCCCCATCGTAATA CAGACGGA TATTACGATGGGGAGG   TTGTCAACCCACCAG  90 44
        pntA NONE
        pntB 1515494 .. 1515511 + -12.7  -4.87786   CTTTTAAACGTGCGG             CGGCCTC TTCG GAGGCCG              TTTTTATACACTTCA 100 42
 STM474_1489 1517015 .. 1517025 +  -8.2  -2.82208   CTTCTGCCTGAGCTG                 GCGC AAT GCGC                 TGTGCTAACTGATTT  60 48
        ydgF NONE
        ydgE 1518111 .. 1518139 +  -5.1  -3.86897   GTGACTTTTCGGTCT        GCGGCTTTCAACG CCG CAGTGAGCGCCGC        TTTATCGCCGGTAAA  61 354
        ynfL 1521813 .. 1521823 +  -2.4  -3.37612   CTGCTATTACTGGCT                 GCCC GAC GGGA                 TTAATTACGCTTAAA  45 11
         mlc NONE
        bioD 1524038 .. 1524066 + -13.2  -2.73441   CACAGGCAATCAGCA        GACCGGGGAGTA ACTGA TACTCGCCGGTC        ATTTCACAAATCATC  79 67
        ynfc 1537554 .. 1537578 + -10.6  -3.56643   ACTCTCCGTGACTAC          CGCGCCGCGC TTACT GCGCGGTGGG          TTTCAGGAGTGTAGA  81 56
        ynfa 1538988 .. 1539020 +  -8.3  -4.67755   GTACGTAACATTGCC      GCGCGACCAGAACAT TTT GTGATCTGGCAGCGC      TTTTTACATCAATAT  89 33
        rspA NONE
        rspB 1541580 .. 1541621 +  -2.1  -4.91852   CTTATTCTGGCAATG GGCACCTATGGTGCAGGTT ATAT AGCCAGAATTATCGGCGCC  TTTGTTTTTGGTAAA  69 259
        ydfI 1544584 .. 1544600 +  -6.5  -2.64099   TGGCTTTGATAATCC              CGGTATG ACC CGTGCCG              CTTATCATGACCCGG  51 220
         dcp 1548792 .. 1548802 +  -5.4  -3.33792   AAAATATATCTTCCG                 CCAT GTG ATGG                 TATTATGTAAATAAT  56 234
        yciG 1549160 .. 1549178 + -12.4  -5.88565   ATATTGCACATACGA             TGCGGGCC ATA GGCTCGCA             TTTTTTTATTCTGAC 100 75
        ydei 1550818 .. 1550835 + -10.5  -6.11644   CCATGCAAGCATTTA             CCGCTGG TGAA CCGGCGG              TTTTTTTTTGCCTGC 100 267
        ydeD 1553978 .. 1554012 +  -2.3  -4.03234   TTCAGCGGCAGCATA    TACCGTGATTCGCCA TGCATAT TGGTGA-TC-CGGTA    TTTGTGTGGCGGCAC  54 419
        marC 1555717 .. 1555750 + -18.3  -3.13639   CCACTAAGGCGCATT     TTCGTCTGCCGGAAA CCTG TTCCCGGCAGACGAA      TGTCTTAATGCGGTT 100 34
        yneI 1559432 .. 1559450 +  -4.4  -2.66316   GCGTCTAATCGCCCT             GACGTCGC GTG GCGCCCTC             TGCTATACTCGCAGG  46 33
        yneH NONE
        yneG 1560864 .. 1560877 +  -8.1  -3.54146   CCGTCATATATCTCA               TGCGC TGAA GCGCA                TATTTAGTTACAACA  67 107
 STM474_1538 1562107 .. 1562120 +  -2.3  -3.12327   CCCACACCTGGCTTT               CGCGG CCTG TCGTG                TGTTGAGTCTGCCCA  42 179
 STM474_1540 1564488 .. 1564504 + -10.1  -5.49234   TCTTTTATTATTTCA              GGACGCT TCT GGCGTCC              TTTTTTATTGACTAT 100 127
 STM474_1551 1573300 .. 1573339 +  -7.3  -3.60035   ATCTCGGTTTAGTTT  CC-CCGGTAGTCTC GGCGAAGGTAATG GAGACTACCGGCGG  TTGCTTCTCTTTATC  67 48
 STM474_1552 1574383 .. 1574396 +  -8.1  -4.07678   ATAGGTGATCAGGTT               CGTCG GCAG CGACG                TTTCCTGTTTTGGCC  77 294
 STM474_1558 1581696 .. 1581707 +  -2.2  -4.57569   GCTATATAACAATCG                CCGT ATCA ATGG                 TTTTTCAAAGGGTAA  61 187
 STM474_1559 1582818 .. 1582839 +  -8.1  -4.08216   ATGAATAAAATAAAA           CCGGTA-CAT ATA ATGCTACCGG           TTTTACCGAGAATAA  74 37
 STM474_1563 1584636 .. 1584659 +  -5.8  -2.98545   TATGACTGATTCACG          CTGGGGGCTG CTTT CCGCCCTCCG           TCATTATTGTCAAGG  52 32
 STM474_1564 1585906 .. 1585919 +  -2.4  -3.53012   GCTCGCTGTCCTCAA               TCTG TGGATT CAGA                TTTCACAAACAGCAG  47 251
 STM474_1567 NONE
 STM474_1568 NONE
 STM474_1569 1592871 .. 1592887 + -10.8  -3.05384   AGCGCCAGTAAAAAA              CCGGCC ATCAA GGCCGG              TTGGGTCCGGAGCGC  76 96
        yddX 1602292 .. 1602305 +  -6.7  -4.05714   AGGGGTTACGTTTCT               TTCGC GTAA GCGAA                TTTGTCCTTAAAACT  70 68
        rpsV 1602514 .. 1602535 + -13.1  -5.38054   TGAAATGACGTTAAA           CACCATTGC ATCT GCAATGGTG            TTTTTGTTTATAGGA 100 52
        sfcA 1604366 .. 1604391 + -11.1  -2.82317   CTTCCATTTAATACG         TACCCGGCGGT GAAT GCCGCCGGATA          TCACTTTCTTCTTTA  74 30
        adhP 1605702 .. 1605727 + -13.4  -3.92522   GACAGCAGATGAAAA         CAAGGCGCTA CCAGGA TAGCGCCTTG          TTTATCAGATTGCGA 100 70
        yddG 1611884 .. 1611900 +  -6.7  -2.80252   GAGATCTCGATCACA              CAAATTA AAA TAATTTG              TAATCTTATGAAACT  55 408
        nmpC 1613138 .. 1613158 + -13.3  -5.13344   TAGTCTGAATACAAA            GCCAGTCCT TTC AGGGCTGGC            TTTTTCTCTTGATGT 100 49
 STM474_1586 1613982 .. 1613998 +  -9.3  -4.82901   GCCATCGTTTCTATC              GCGCCGG CCG CCGCCGC              TTTTTCTGCCGGCGC  93 369
 STM474_1588 1615994 .. 1616008 +  -7.1  -3.42405   AATAAGTTCTCAAAA               GAGCG CGTGA CGCTC               TGTCTCTTTTTTGTG  65 174
        narU 1617472 .. 1617485 +  -2.4  -3.53444   GCACCTGTAGGACGG               CCAT CCGGTA ATGG                TTTAACGCCAAATCG  47 49
        narZ NONE
        narY NONE
        narW NONE
        narV 1624235 .. 1624266 + -12.2  -2.89421   CGGGCAAAGAAAAAC      GCCTGGGCGTCGTC ATTC GGCAACGCACAGGC       TATGATGATTCTTCA  80 67
        ydde 1625632 .. 1625643 +  -7.2  -3.73968   GCATCAGGCGGTATT                CGCC ATGC GGCG                 TTTGCTGGGCAATTT  65 465
        ansP 1629007 .. 1629030 + -14.6  -3.74747   ATAACATTCCCCTTC          CCCGGCA-GCC CCA GGCCTGCCGGG          TTTAATGCGCGTTGC 100 37
        yncD 1632906 .. 1632924 + -14.6  -3.19642   GCAAATATCCGGCAA             TAGCGGGG AAT CCCCGCTA             TTGATAAGTCATAGT  95 48
        yncA NONE
        ydcZ 1636437 .. 1636451 +  -4.2  -3.79113   TGTAACAGCATGATT               CGCCTA TTA TACGCG               TTATTGTCGCCCGAT  55 300
        srfA NONE
        srfB NONE
        srfC 1643323 .. 1643335 +  -3.3  -5.27335   CAGAGGAAAAAACGC                GCGCA ATA TGCTC                TTTTTATTTGACGCA  79 278
        sifB 1649990 .. 1650004 +  -4.3  -2.76162   CCAGAGTTGATCACA               CCATA AATAG TATGG               ATTTACAATCCCCTG  47 31
        yncj 1650554 .. 1650568 +  -2.8  -4.65168   CTGAAGCGACAACGC               TGCC GGGCTGG GGCA               TTTTTAAGATGTGGT  67 91
 STM474_1618 1654804 .. 1654815 +  -5.8  -3.51232   CAAGAACTTGCTGCC                CGAC CTGG GTCG                 TTGGTTTGGGGACGG  57 492
        ydcK 1658313 .. 1658326 +  -6.7   -3.2964   GTGACATATTGCGGC               CAGTC GAGC GACTG                TTGTAGCCACGCTTT  56 440
 STM474_1624 NONE
 STM474_1625 NONE
 STM474_1626 NONE
 STM474_1627 NONE
 STM474_1628 NONE
 STM474_1629 NONE
 STM474_1630 NONE
 STM474_1631 1664668 .. 1664688 + -15.5  -4.23674   AATCATACAGGAAAA            GGTCGGGTA TAG TACCCGACC            TTTATATTACTGGGG 100 45
        ydcI 1672802 .. 1672812 +  -4.6  -3.61398   ACGGCTTGCGTCAAG                 CGGG CAG CCTG                 TTCTTCAAGCGAAGC  52 156
 STM474_1641 1677018 .. 1677029 +    -3  -3.73775   ATTAAAGCCTGACTT                TTAC CAGA GTAA                 TTTCATAAGAGTGCC  52 29
        sseJ 1679680 .. 1679704 +  -4.1  -4.61199   GTGGATTCCGGCACT          CTGCGCCAGGT TTT ACGTGCCGCCG          TTTTGTCTATACCGT  69 333
 STM474_1645 1681493 .. 1681522 +  -4.3  -2.67143   TGGCATTGTCGATAG       CTGGATGAAATAG TAAG CTATGTCATCAGG        TAATATGCTGGCTAT  46 13
 STM474_1646 NONE
 STM474_1647 1682904 .. 1682923 +  -2.8  -2.79106   TGTTTTTTTAGCGAG            GCACAACGA TGA TCGCTG-GC            TGGTCTCTCTTCTTT  41 14
 STM474_1648 1683580 .. 1683592 +  -3.4  -2.64925   GCTTCGCCATTACGG                TCAG GGTTA CTGA                GTTGTACTGCACTAT  42 13
 STM474_1649 1685689 .. 1685705 +    -3   -4.4078   TGATTAATGCTTGCC              TAACGA TTGCT TCGTTG              TTTTAATTCCAGCGC  60 435
 STM474_1650 1686551 .. 1686584 +  -6.7  -4.61199   AGACCCGTCCTCCTT     CGCCTGCGTCA CGGGTCCTGGTT AGACGCAGGCG      TTTTCTGTATGGAAT  79 171
        acpD 1692905 .. 1692924 + -13.6  -2.67717   GCTTAAATATTTTTG            CCTCCCGT TTCG ACGGGAGG             TGACTTCTTAGGTTT  86 35
        ldhA 1697878 .. 1697901 + -12.4  -4.13767   CTGTTCTAATCCTGT          CGCTCCCCTG CGCT CAGGGGAGCA           TTTTCGGATAACCCC 100 32
        hslJ 1698579 .. 1698596 +  -6.9   -2.8552   CGCAATTCGCTTCGC             CGGCGCT GGAC ATCGCCG              CTTTCATCCCTGGCG  56 212
 STM474_1662 NONE
        nifJ 1702538 .. 1702557 + -13.6  -3.50047   CTGGAAACAAAAAAA            GCCCGAAC ATCC GTTCGGGC             TTGTCAATTTATACG 100 61
 STM474_1664 1703630 .. 1703640 +  -2.4  -2.75481   AATGGCATAAATGAT                 ACCC GCA GGGA                 TGGTTCGCATTGGGA  39 237
        ydaO 1705103 .. 1705131 + -14.6  -2.66008   AGTGAAATAATCTGC        AGGCGTCTCAGC ACTCC GCTGAGACGCCA        TGCTATCGATCATTT  89 31
         ogt 1711039 .. 1711051 +  -4.8  -3.36175   TATTATGAATATACA                GGCA AAAAG TGCC                TTATCGGTCACACTT  54 33
         fnr 1712046 .. 1712062 +  -2.2  -3.91352   CATTTATTGATCTGG              CAGAAG CGCTT CCTCTG              TTTCATTCACCATAT  53 92
        ydaA 1713086 .. 1713123 +  -9.1  -3.26531   CGATTAATCCCTCTT   GCGTCCTG-CCGGATGGC GCT GCCATCCGGCCAATACCC   TATTCCTGTTACTCA  70 34
        ynaI 1714663 .. 1714697 + -14.5  -3.12668   ACAAAATAAAAGATA    GCC--GGTGCCCGATAA GTG TTATCGGGCACCGAGGC    TTCCCTGTCCGGATG  89 32
 STM474_1678 1716492 .. 1716504 +  -4.7  -3.76837   GAGAATGCCTGCGCC                CCTGC ATT GCCGG                TTATTCGGTTCTCTG  58 443
 STM474_1684 1722355 .. 1722401 +  -7.8  -2.80028   ATACTTTAACTATTA ATGGGAGTATGCTGGCCGGGCG GCT TGCGGGGCCTTCATGCTCCCAC ATTTACAATGTTGGT  60 273
 STM474_1685 1723924 .. 1723950 +  -2.8  -2.82036   TTCGTCATTCCGGTT         GCGGTGTCAACC TCC GGCTTACCCTGC         GTTTCAATAATCTCT  41 342
 STM474_1688 1725587 .. 1725613 + -10.9  -3.04248   CAGGCGAATATCACA         CGGTTGCCG TCTACGCTC CGGCAACCG         TGTTAGAAGCTGTTC  76 45
 STM474_1691 1728784 .. 1728820 +  -8.5  -2.57013   GGCGCTCGCTTAATC    CCCATGCCTTCTGCCAG CAT CAGGCGGCGGGCGTGGC    TACCTTGCGTTAACA  63 55
        ycjI 1731605 .. 1731617 +  -6.2  -3.58343   TGATCATATCGTAGC                GCCC CGTCA GGGC                TTTCAGACTACTGCG  57 248
         tpx 1733000 .. 1733029 + -17.3  -4.55023   GGTGCTCTTTTGTCA       CAAGAAGGCCTCT ATCC GGAGGCCTTCTTG        TTTTCTACTCTTCAC 100 81
        pspF NONE
        sapA NONE
        sapB NONE
        sapC NONE
        sapD NONE
        sapF 1745833 .. 1745855 +  -6.3  -3.14051   TAAGCGAAACAAATA           CCCTCAG TTCGATTCT CTGAGGG           TGTTCATGCGACTGC  57 38
 STM474_1712 NONE
        ycjE NONE
        fabI 1749865 .. 1749881 +  -3.8  -3.49176   ATAGCGTTCTGATAT              TTGTTA TCACC TAACAA              TCTTTCATCCCTTTC  52 113
 STM474_1715 NONE
         rnb 1753153 .. 1753179 + -14.5  -4.96427   GCTTAGCTCACTCAA         CGGCCTTTGCT GAGAA GGCAAAGGCCG         TTTCTTTTCTTCTTC 100 45
        yciR 1755413 .. 1755423 +  -2.4  -4.00465   ACAGCCTGTGCAGAC                 AGGC ATA GCCC                 TATTTTTCCCTTCTC  53 61
 STM474_1718 1755692 .. 1755719 +  -6.8  -2.94622   GATAGCGATTATTTG        TCCGGGATGGCC GTTA GCCCTTCCCGGC         TCTCTGACTGTCTGT  56 39
        yciT 1756530 .. 1756551 +  -9.5  -2.72799   TAAAATATTTCCCGA           TGGTTTGCC CTAT GGCAAATCA            TCCTCTCTCTAAGAC  69 38
        osmB 1757082 .. 1757107 + -11.9   -4.4078   CAAAGTTGACTTTTA         CGCCACGGT AATTTACA ACCGTGGCG          TTTTCATTAGCCGCC  95 113
        ribA 1761989 .. 1761999 +  -8.2  -5.19212   TTTCCCGGCAATTAC                 CGCC AGC GGCG                 TTTTTTCCTGCTGGT 100 462
        yciN 1770191 .. 1770227 +  -4.3  -3.93026   ATGTCCAGAGCCGGA    CGCATCCGCTGCACAAA CTC TTTGAACAGATGGTGCG    TTTCGTTGAGATCTT  60 320
        yciK NONE
        btuR 1772844 .. 1772866 + -10.4  -3.53091   GCGAGGTCGAGCTCA           GTCCAGCCGC CGC GCGGCAGGCC           TTTCGGCAGCGGGAT  74 299
        trpL 1775354 .. 1775372 + -10.2  -5.75342   GCCAAACGATACCCG             GCCCGCCT GTT AAGCGGGC             TTTTTTTTGAACAAA 100 46
        trpE NONE
        trpD NONE
        trpC NONE
        trpB NONE
        trpA 1781940 .. 1781962 + -12.7  -3.18912   CGCATAACGGGTTAA           GCCGTCAGC ATAAC GCTGGCGGC           TTAATGAGTGGCTGG  86 34
        yciG 1782636 .. 1782657 + -12.3  -3.63744   CTTTTATCAAGCAAT           CTGCGAGTC TTCT GGCTCGCAG            TATTTTGCCCAGGAG  95 68
        yciF NONE
        yciE NONE
 STM474_1748 1784703 .. 1784721 +   -16  -5.14563   GTCATGTCCTTTTTT             GACCCCGC CTG GCGGGGTC             TTTTTTCGTCACAAC 100 64
 STM474_1750 NONE
        yciC 1786914 .. 1786929 +    -6  -2.80016   GCAATGCGCCGTTAC              GCGGCG CATT CGACGC               TCGTTGATGATGGAA  53 44
        yciB 1787510 .. 1787534 +  -7.1  -3.80535   TCCCGTGACTTATCA          TCGCCAGAC TGCGAAC GCCTGGCGA          TATTTTCTCCGCCTT  68 44
        yciA 1788061 .. 1788111 +  -8.8  -2.52015   AGGGTTAAGTATACC CGCTTACGCCGCCAGCAGGTGATG GTA TATTCCTGGCTGGCGGCGCCAGAG ATTACTCAATCTGCG  63 33
        yciI 1789377 .. 1789396 +   -15  -3.91897   AAAGGATGGCCTGTT            GGGCACCG CATA CGGTGCCC             TTTCTGGCTCACACA 100 41
         cls NONE
        yciu 1791812 .. 1791824 +  -4.8  -3.39803   TGCGGCGTAATATCA                CCGT ACCCC ACGG                TTGTGACTGTCACTA  51 293
        adhE 1802688 .. 1802705 + -12.7  -6.09196   TTAGCATGACAATAA             CGGCCTC AATT GAGGCCG              TTTTTTTGTTTTACC 100 54
         hns 1804572 .. 1804588 + -13.7  -5.81412   CCTGGATGCTTAAAA              TCCCGCC GCT GGCGGGA              TTTTTTTTGCCTGAG 100 48
        ychJ NONE
        purU 1809374 .. 1809403 +   -10  -3.06261   TCATTTGATATGATG       C-GCCCCGCTTCC CAAAA GGAAGCGGGCCAG       TATTAAGCATTACCC  73 136
 STM474_1777 1812314 .. 1812329 + -10.4  -3.55444   ACAGCCATAAAAAAA              CTCCGC CGAA GCGGAG               TTTAGGGCATCGAGA  77 31
        narX NONE
        narL 1824023 .. 1824034 +  -3.6  -4.56597   TGCGCCACTTCACTG                GCGG CAAG CTGC                 TTTTTGAGCGGCACG  69 474
        ychN 1825587 .. 1825611 +    -3  -5.55769   GCAAGAAAATCAGGC         TAACACGCGAGT AAT AC-CGCGT-TTA         TTTTTTCTTATGCCA  83 83
        chaA 1827317 .. 1827337 +  -7.5  -3.53012   ATCAATCGCTTTTAT            CTGGGTCAG GAA CTGCTCCAG            TTTCGCCAGCGGCAG  62 136
        lolB NONE
         ipk 1834483 .. 1834497 +   -10  -3.62522   GGCAAGCTGAGCTTC               GGTGAC AAC GTCACC               TTGTTCCAGACGTTG  74 160
        prsA 1835580 .. 1835593 +  -9.5  -5.76633   AACCCGGATCTGAAA               CCCGC TGCG GCGGG                TTTTTTTGTCTGTAA 100 44
        ychM 1837436 .. 1837451 +  -3.2  -3.99324   TATGACGACGATTGT              CGTTAC GGCG GCAACG               TTTGTCATAGTGACG  55 90
         pth 1838559 .. 1838586 +  -9.8  -2.94099   AGGCGCAATAACCAG        TGATGTGCGGCA TTTT TGCCGCACGCCG         TGTATAATAGGCGAA  70 30
        engD 1839825 .. 1839842 + -11.3  -5.68438   AAGAAAGTCATAAAA             TCCACGC AGCC GCGTGGA              TTTTTTATTTCATAA 100 88
        mbhs NONE
 STM474_1807 NONE
 STM474_1808 NONE
        hyaD NONE
 STM474_1810 NONE
        hyaF 1847188 .. 1847205 +  -6.3  -2.86773   GCTCTCAACAGGAAC             GTCACCGG AGT CCGGT-AC             TGATTAGCTTTTTAC  55 42
 STM474_1812 NONE
 STM474_1813 NONE
 STM474_1814 1850047 .. 1850078 + -10.9  -5.36364   CAACAATAAAGAGGT      AAACCGGGGTCAG CGCCGT CTGACTCCGGTTA       TTTTTATCTTTTTAC 100 32
 STM474_1815 1851733 .. 1851750 +  -7.7   -5.4492   ATCATTGCGCTAAAA             TCCACGT CCCG GCGTGGA              TTTTTTGTCTGTATA  95 49
        treA 1853646 .. 1853685 +  -5.1  -2.57881   AGTAACGCGTGTTTA TAGT-AG-GTTGACCCGGT GCTG ACCGGGTCAACGCTTACAC  GTTCTGCAGCGGTTA  48 36
        ycgR 1855335 .. 1855345 +  -8.2  -4.68593   GGATCAACCCCCCAT                 GCCG CCC CGGC                 TTTTTCACTGATGGG  90 505
        ldcA NONE
        ycgO 1858442 .. 1858462 +  -2.5  -3.28712   TGGACCGGTCGACGC            CTTAGCCTG AAT TAGGTTACG            TTGTCACAAACGGCA  46 72
 STM474_1825 1862942 .. 1862954 +  -4.8  -3.76492   AGTGGCGACCAATGC                GGGT GTATA ACCC                TTTCATGCCGTTCAG  55 272
        nhaB 1865228 .. 1865258 +  -2.5  -4.68994   AACGCTTTCGTAACG      TTTG-GCCGGGC AATACACC GCCCGGCTCCGA       TTTTTGCCTGATAAT  65 28
        dsbB 1865904 .. 1865919 + -10.4  -5.75342   GGTCGTTGATACACA              CGCTCC TTCG GGAGCG               TTTTTTTTGCCCGAA 100 32
 STM474_1829 1866735 .. 1866763 +  -7.5  -3.39895   AGAAGATGTAAAAAA       CCGCCTG--GCAC AGACG GTGCATCAGGCGG       TTGGTTAATAGCACA  63 413
        minC 1869631 .. 1869643 +  -4.9  -3.29973   ACAACGCTTTGACAG                TTCAA CCG TTGAA                TTGATCCCTTTTTAA  54 9
        minD NONE
        minE 1870780 .. 1870809 + -15.3  -5.57054   GGAAAATTCCTGGAT       TAAAAAAGGCAGA AGAA TCTGCCTTTTTTA        TTTTTTTACATTATT 100 52
        yoaB 1878605 .. 1878617 +  -2.6  -3.73647   CCTGGATACGTTCTA                CGGC TTTTT GCTG                TTGTTCATGACTGAG  50 162
        pabB NONE
        nudl 1880859 .. 1880872 +  -2.3  -3.19026   TCATGTGAATAGTTA               AGCTG ATGC CAGCG                TTCCCTCTTACACTA  44 204
        sdaA 1882325 .. 1882353 + -13.9  -5.10968   CGCCGTTTCCCCTCC        CTTCGCCCATCTG CTA CGGATGGGCGAAA        TTTTTATCTCTTCCT 100 42
 STM474_1849 1884479 .. 1884495 +  -3.7  -2.71791   GCAAAACGCCTAACA              GATTGAT AGG ATCAAGC              GTTTCCGGCACCACT  43 457
        manX NONE
        manY NONE
        manZ 1888803 .. 1888820 + -14.1  -5.76237   GCTGTTGTACACTAC             CGGGGCC AAAC GGCCCCG              TTTTTTATTTCTCTG 100 42
        yobd 1889353 .. 1889368 +  -6.2  -4.66537   TATTTCGAATCATAA              TATAGC TAAG GCTATA               TTTTCTATTGACCAA  78 76
        yebn 1890333 .. 1890343 +  -6.8  -3.61715   CAGCTAAGTCCGGCG                 CTGG CAG CCAG                 TTGTTCCCACACGTC  62 80
 STM474_1861 1894190 .. 1894200 +  -8.2  -4.58563   TCGCTTGCCGCTGTT                 GCGG GTT CCGC                 TTCTTTTTCTGGTTC  87 356
        yobh 1895186 .. 1895208 +  -9.2  -5.78622   GATGTTATAAAAAAA           GCAGCTAC ATTTTTC GTAGCTGC           TTTTTTTTAACGTCA 100 184
 STM474_1866 1897585 .. 1897602 + -12.7   -4.3534   TCAGGCGTAAAAAAA             GCGCGTC ATTC GACGCGC              TTTTCATACTTGCCA 100 31
        yebS NONE
 STM474_1872 NONE
        yebU 1907614 .. 1907625 +  -3.6  -2.55015   CCGCACTTTTTGACT                GGCG CTTT TGCC                 TACGTTGACTACGCT  42 57
 STM474_1874 1907948 .. 1907963 +  -8.2  -4.34486   CTGACTCAAAAAGAA              CCCGTC GCCA GGCGGG               TTATTTATTCTTCCT  79 37
        yebW 1908710 .. 1908736 +  -4.3  -2.91582   GGACTCACGCAGTAA        AGCCAGG-CAGC CCAG GCTGTCCGGGCC         TCTATCAATGAGATC  46 497
 STM474_1880 1911364 .. 1911376 +  -3.3  -3.53012   TTATATATAGAAAAT                GTGGT CAT GCCGC                TTTAACAAGCCAGGG  50 8
 STM474_1881 1912353 .. 1912368 +  -7.5  -2.92091   TTGTATCCGTACCAT              GCCGC CTACAA GCGGC               TGTCTGAGTACCTCT  59 191
 STM474_1883 NONE
 STM474_1885 1914352 .. 1914381 +  -2.7  -3.57406   TTGAGGTTTTCCCAG       TGCGCACGCCAGC TTTT GCTGATTTGCGGA        TATTTATCGTCCCGG  50 438
 STM474_1887 1915852 .. 1915874 +  -6.4  -3.75024   AAATTCTGGAAAATT           TCGGAAATTT CGG AAATTTCGGA           TTATTGATCATAAGC  64 106
        pagO NONE
 STM474_1889 1918264 .. 1918274 +  -5.4  -4.10925   ATATGACCAATTCGC                 TGAC TTT GTCA                 TTTTAAGGAGTGTGT  65 9
 STM474_1890 1919232 .. 1919248 +  -2.2  -4.52857   GTGGAAATACTGCAT              TACCCT AACAC AGGGAA              TTTTCTGTACAGCGT  61 353
 STM474_1891 1919544 .. 1919570 +  -3.1  -3.18452   TCAAGGTTAAAGGAA        CAAAGAGCT-CT TTAA AGTAACTCTTTG         TTCCATTACGATAGT  46 31
        pagK 1921252 .. 1921268 + -13.7  -3.29096   GCTTCACGAAGTCTG              GCTGCGG CCT CCGCAGC              TTCATCATTCATCCA  87 330
 STM474_1897 NONE
 STM474_1898 NONE
 STM474_1899 1923236 .. 1923261 +  -4.7  -3.65714   CGTCGGCGTTGGTTG         TTTTGCTTCTG ACGG CAGCGGCAAGA          TTTGCGGTGTGCTTT  55 171
 STM474_1902 1924589 .. 1924599 +  -8.2  -2.77013   TAGCGCAAAACCACA                 CGCC AGT GGCG                 CTTATTGAAAAACTA  60 38
 STM474_1903 1925818 .. 1925845 + -11.4  -5.45652   TCAGAGATAAAAAAA        CCGTAAGCCTTT TCGT GAAGGTTTACGG         TTTTTTATTAAAAAT 100 353
        holE NONE
 STM474_1909 NONE
        exoX 1929341 .. 1929371 +  -9.7  -2.91239   AACACCACAATAACC      CGCGACGCTCACAA GCCG TTGCGGGCG-CGCG       TCTATGCGCTATGTA  70 28
        purT 1934404 .. 1934441 +  -6.4  -4.83615   CCGCGTGACGGTAAA  AG-GCTAATG-CGCCATC GCCT GATGGCGACGTTAGCGCA   TTTTTATCAGACCTG  80 19
        yebK 1940011 .. 1940023 +  -3.4  -4.25104   GGATCAATGTTCACG                CAAC ACCAA GTTG                TTTTAGTCAACGGAG  60 115
        pykA 1941533 .. 1941558 + -14.9  -4.49958   CAGGGTTTGTCAGCA         TAAAGCCTCTC TTAC GAGAGGCTTTA          TTTATTTGATGGGAT 100 71
        znuC NONE
        znuB 1946887 .. 1946919 +  -5.6  -2.73364   AGCATATCCAGCGCC     TG-CGCGGCAATTTC CGCT GAAATAGCCCCGTCA      TGCTTCACCTCAGCA  47 369
        yebb 1950821 .. 1950838 +  -2.7  -3.67141   TTCCCCGCGCCAGAT             TGAGTCGG CTC TCG-CTCA             TTTGCATCGCGTTCT  51 53
        yecD NONE
        yece NONE
        yecN 1956603 .. 1956619 +  -3.6  -4.85782   TTTTCTCCCTGTATT              AGCGCA CAATA TGCGCC              TTTATTTTTCCCGGA  69 24
        yecO NONE
        yecP NONE
        argS 1961921 .. 1961949 + -14.6  -5.06414   TCGTTAACATCATCA        GGCCTGACTCCG GATAA CGGACTCAGGCC        TTTTTATTGCCACAG 100 49
 STM474_1943 1964172 .. 1964186 +  -2.8  -3.33922   GCGAGATATGTTTCA               CTATCC CCC GAATAG               CTTTTTCCGCCACCT  47 240
        yecG 1980836 .. 1980862 +  -5.7  -3.34517   TGTTGCTGGTGCCCT         TAGCGGGCGAC TAGTC GCCGCTCGCGA         TATTTCAGGCCAGCT  56 12
        ftnB 1985456 .. 1985478 +  -9.8  -3.50447   CACATCATGCCAGCC           GACAGGCGCG AAA CGCCTCTGTC           TTGTCTGGGCATTAC  75 170
 STM474_1966 1986777 .. 1986796 +   -10  -4.35747   TGCAGGGTCGCTATT            GCCAGCAT GAAG GTGCTGGC             TTTCCTTTATTTTTA  87 83
         ftn 1987636 .. 1987651 +    -6  -4.63932   TGTGAAATCGTGCCC              GCTCGC CAAA GCGCGC               TTTTATTGCCGCCTC  75 205
        tyrP 1989259 .. 1989272 +  -3.8  -3.52177   TTACGAGCCATTAAT               GCAG GCAGCA CTGC                TTAAATTTTTTGCCG  52 105
        yecf 1997167 .. 1997193 + -12.2  -3.63627   GCCAGTAGTAAAAAA         CCGGCTGTTAGC ATC GCTTTCAGCCGG         TTTCGCGTCTGGCGC  89 33
 STM474_1991 NONE
        fliD NONE
        fliS NONE
        fliT 2009205 .. 2009218 +  -3.8  -3.28712   TTCCATACTCCAGAG               GTCG GCTAAA CGAC                TTCTGGAGCACGGAA  50 67
        amyA 2010783 .. 2010796 +  -5.9  -5.24129   CGGCGTCGGCAGCGG               CGTCG GCAG CGGCG                TTTTTTCTAACGCGG  83 89
        yedE NONE
        yedf 2012811 .. 2012839 +  -9.5  -3.05597   TCAAAAATAAGCGCA        TACTCCCGCTGTA CGT TACGGCGGGAGAC        CTTTTACGGCATAAC  71 31
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ NONE
        fliK 2020550 .. 2020564 +  -2.8  -3.96148   GTAGCATGATTATCC               GCGT CTTTTCC ACGC               TTTGTCGTGGACAGG  54 49
        fliL NONE
        fliM NONE
        fliN NONE
        fliO 2022876 .. 2022899 +  -2.2  -2.56982   GAAGAGCTTACTCAA          GCGTTCCGGG AGAT CCTGATGCGC           CGTTTGTTATTCCTT  39 7
        fliP NONE
        fliQ NONE
        fliR NONE
        rcsA 2025798 .. 2025820 + -16.2  -4.14392   TGCCAGTACCACGCC           CGGTCGGCGG GGA CCGCCGTCCG           TTTTAACGGTTACCC 100 205
        yodD 2026391 .. 2026402 +  -2.2  -2.80816   GTTCGGTAGCAAAAG                TGTG ACAA CGCA                 TGTGCTGCCTGGAAG  40 209
        yedP 2027747 .. 2027778 +  -2.8  -4.56597   GAAAATGGCTGGCGG      GCTTCCCGGTAGCGC TTT GC-CAGCCTGGACGC      TTTTTCAAACAGCGC  67 440
        yeda 2031473 .. 2031509 + -12.4  -3.02144   ATGAATCCCCTGGGT   GTCGATCTGCGCGCTGGC GCC GCC-GC-CGCAGATCCAC   TCTTCCAGGCGCTCC  76 41
 STM474_2026 2034814 .. 2034829 + -10.4  -6.18768   TCATTACCCACATTA              CCGGCA TTTA TGCCGG               TTTTTTTTATGTTTT 100 145
        ompS 2036350 .. 2036374 + -17.9  -3.80733   ACGCTTTATGTTATT          CAAGCCCGTGC TTA GCGCGGGCTTG          TTATTATAGGGTAAG 100 42
 STM474_2032 2041766 .. 2041790 +  -5.6  -2.63089   ACGACAGGAAAAAGA          AAAGGCGGGT AATAA ACCCGCCTGA          ATATTTAGCGTGGTA  50 281
 STM474_2062 NONE
 STM474_2063 2064604 .. 2064622 +  -5.9  -4.98531   CTGAAATCTCATTTA             GCCGTTC CTCAA GGGCGGC             TTTTTCATTTACCAG  78 71
 STM474_2072 2072957 .. 2072973 + -12.3  -6.11644   GAAAGCGTCGACAAG              GCCACCA TTA TGGTGGC              TTTTTTTTTGACTCA 100 43
 STM474_2073 NONE
 STM474_2074 2075011 .. 2075058 + -10.7  -3.78235   AACTTTAAAGCGTAA TTGCTCTGCATTAAATCCCCG GCGCCG CGGGGATTTATTGAAGTGTAA TTCTGTTAATTATCG  85 26
 STM474_2075 2076027 .. 2076041 +  -4.2  -4.15061   TATTCGACGCGCGCA               CCGG TGAGTAC CCGG               TTTATATGTACATTC  59 366
 STM474_2076 NONE
 STM474_2077 2078006 .. 2078016 +  -2.4  -2.56259   TAACGCGCCTGTTGT                 CTCC ATC GGTG                 CTGTGTTCTTCGATC  39 88
 STM474_2078 2078741 .. 2078760 +  -7.2  -3.07487   TCCACCAGCAGGGTA            TCA-GCCTG TAC CAGGCATGA            ATTTTGACGCTATAG  60 250
 STM474_2079 2079788 .. 2079807 +  -6.4  -5.60993   GAGCTTTTCGATGTG            CGCCAG TTAAAATT CTGGCG             TTTTTTTCTCACCGA 100 39
        yeeI 2081047 .. 2081076 + -13.7  -2.73529   AGGAGCCAAATTTAG       GGAAGCAGACGTT CACT GACGTCTGCTTTC        TGCATTTATATCAAC  86 209
 STM474_2084 2082844 .. 2082873 +  -3.3  -3.34522   ACAACCACTACACCG       CGCCATGCCCCTG TTTT CGGGGTTCCGGCG        TTCATTCCCGAATCT  47 223
 STM474_2086 2083942 .. 2083954 +  -3.3  -4.24285   TTCAGGTGCTCACTC                CCGCA TCT TGAGG                TTTATTGGGTATATA  60 148
 STM474_2087 NONE
 STM474_2088 NONE
 STM474_2089 NONE
 STM474_2090 2088580 .. 2088597 +  -6.9  -3.54424   TTTGAATGGAACGGC             GAGCACC GGCT GGTGCGC              TTTACCGACGTGCGC  62 105
 STM474_2091 2089157 .. 2089168 +  -5.8  -4.06502   ATAAAACCGGTTTGC                CTGC CCGG GCAG                 TTTAATTTCACCGTG  65 240
 STM474_2093 2091003 .. 2091025 +  -7.1  -3.42078   TTGTCTACCATAACT           TATCATTGC CCCGA GCAATGGTA           TTGTAGTCGCGTATA  63 345
 STM474_2096 2091987 .. 2092004 +  -5.5  -4.07568   ATTAACGAGGTGCCC             CTGGCTT GTCA AAGCCTG              TTTTCACAAAAAAAG  65 141
        pduA NONE
        pduB NONE
        pduC NONE
        pduD 2118007 .. 2118017 +  -8.2  -3.73224   AAACCCGCAGGAACT                 GCGC GTG GCGC                 TTTGATAAAGGATAA  71 10
        pduE NONE
        pduG NONE
        pduH NONE
        pduJ NONE
        pduK NONE
        pduL 2122146 .. 2122172 +  -2.1  -2.57463   CCGGCTGGTAGGCCC         GCGATGAACGG CGAAA CCCTGCAGCGC         ATTGTCGAGGAGATT  39 19
        pduM NONE
        pduN NONE
        pduO NONE
        pduP NONE
        pduQ NONE
        pduS NONE
        pduT NONE
        pduU NONE
        pduV NONE
        pduW NONE
        pduX 2131474 .. 2131490 +    -3  -4.30576   GATGTAGTCATCAAC             GCGATCT TCAT AG-TCGC              TTTTCATACTGGCGA  62 170
        sopA 2141660 .. 2141679 + -12.2  -2.91264   CCCGCATGGAATTAA            GGGACACA GCGT TGTGTCCC             TCTGTACATAGACCC  80 52
        sbcB 2143496 .. 2143514 +   -16   -4.4261   ATGACAAACAAAAAA             CCGGAGGC ACT GCCTCCGG             TTTTACTATTGCCGA 100 115
        hisG NONE
        hisD NONE
        hisC NONE
        hisB NONE
        hisH NONE
        hisA NONE
        hisF NONE
        hisI 2154478 .. 2154492 + -12.8  -5.14563   ATAAGCGTAAAAAAA               CCGGGC AAT GCCCGG               TTTTTTAATGAGAAA 100 37
        yegh 2202653 .. 2202693 + -15.5  -2.71791   CCGGCCTGCTTACCA GGCAG-GCCGGA-GGCGCG TTAGC CTCGCCATCCGGCTCTGCC CTTTGGCCAAAAACT  93 57
 STM474_2209 2209477 .. 2209494 +  -4.8  -4.07687   CTGCTCAATATCCGG             C-GGCGC GGCGA GCGCCAG             TTTTCCCGCCAGCGT  62 266
        yegD 2211736 .. 2211755 + -11.4  -3.71649   CCTTTCCTTATTTTG            GCCCCTTC CTCG GGAGGGGC             TTTCCCGTTTCAGCG  91 202
 STM474_2213 2213237 .. 2213247 +  -6.8  -3.08679   AAAAAGGAGCGCGCG                 CCTG ATG CAGG                 TATTACCTCCGGGCA  58 21
        yegN 2216358 .. 2216369 +  -3.6  -4.66264   CGCCATAAAGAGGAG                GCGT AGAT GCGC                 TTTTTCGCCCTTTTC  66 20
        yegO NONE
        yegB NONE
        baeS NONE
        baeR 2223002 .. 2223012 +  -5.4  -3.63744   ATAACAATAACAAGG                 TCGT AAG ACGA                 TATTTTCCGCCAACG  59 52
 STM474_2219 NONE
 STM474_2220 NONE
 STM474_2221 2227323 .. 2227339 +  -2.9  -2.78384   GGCGCTACAATGCCC              GCCCTTA AAG TGAGGAC              TCTCCTCAAGCCGCC  41 64
        yegQ 2228898 .. 2228923 + -13.4  -4.65666   GGAACCACCTCCTTG         GCCTGCGTAA TCTCCC TTACGCAGGC          TTATTTTTTGCGTAT 100 162
 STM474_2223 2230572 .. 2230582 +  -5.4  -2.83371   ATATCATTATATACT                 CACT GTT AGTG                 CTTGTTAGTAAGATA  47 339
        yegS 2232644 .. 2232665 + -11.6  -4.78572   TAACACCTGTCGCTG           GCCGGATG CGCTCA CATCCGGC            TTTTCTTCGTTGAAC 100 41
 STM474_2229 NONE
        yegU NONE
 STM474_2231 2237256 .. 2237305 +  -8.6  -3.62864   ATGCTGTATTCAATA G-GCCGCTGCTGCTGATCGAGCG CCACC TGCTTAATCACCAGCACCGGCAC TTTACCATCCATTTG  68 60
 STM474_2235 2240469 .. 2240500 + -12.4   -2.6175   GCAGAAAGATTGTCA      TCCCGGTCACTTAT TATT GTAAGTGACCGGAA       GTTCATTCACCTATC  81 209
        metG 2249496 .. 2249513 + -12.7  -5.03145   TGAAATAAGCAACAA             GCCGGAG CATG CTCCGGC              TTTTTTAACCGCTTA 100 33
        yehR 2250231 .. 2250250 + -11.4  -5.01553   GGTAAAGTCGCTCAG            GGCGCTGC TTCG GCAGCGTC             TTTTCTTTATGAATT 100 69
 STM474_2244 2251183 .. 2251198 +    -4  -3.37685   ACGTTCCGCCGTCAA              TGCAGGC GCC GCCT-CA              TCTTTGCCGCGTTTT  49 319
        yehV NONE
        yoho 2255133 .. 2255146 +  -2.4  -2.50016   CCACCGTTGAAGCGA               TGGT CGCCGT ACCA                ATATTGATAATCACC  38 176
 STM474_2254 2258856 .. 2258874 +  -8.8  -3.01791   AGTCATTGCCAGACA             GGGCGC TGCTATC GCGCCC             TGTTGACGGCAGGCT  66 118
         dld 2263284 .. 2263300 +  -6.5   -5.2197   GCACTGGCGCTGGCT              GCCGC CATTTGC GCGGC              TTTTTGCTTTTTATA  91 126
        yohD 2265673 .. 2265716 +  -5.8  -4.72188   GAGGCCCGTTAAACC CGATGGTATCCGGATGGC ATAACGCC GCCATCCGGCACCCGGCG TTTATTTTGCGTTGA  74 29
 STM474_2262 2268385 .. 2268421 + -10.8  -3.30771   GATGATTTTCTGATT    CCTGCGCCGGGCAG CGATAGTAT CTGCCCGGCACACG    TTCTGGACGCTGTAG  80 41
 STM474_2269 2275591 .. 2275601 +  -2.6  -3.55447   GATCGGTAGCACGTT                 TTAA CGT TTAA                 TTGTATGATGAATCC  48 110
        yohJ NONE
        yohk 2276841 .. 2276853 +  -7.7  -3.22106   TAAGACATAGCAGGC                CCGTA AAC TACGG                TTCCATTACATTGTT  64 138
         cdd 2277785 .. 2277798 +  -8.1  -3.30243   AATGTGCCGGATAGC               GACGC ACTG GCGTC                TTATCCGGCCTGACT  65 44
        sanA NONE
 STM474_2274 2279059 .. 2279071 +  -2.6  -3.70505   TTTAGATCATTAAAA                CGCG TTATT TGCG                TTTCGCCTTAATTTA  50 180
 STM474_2275 NONE
        yeiA 2281594 .. 2281620 +   -13  -3.54475   GCTCTCGGTATGAAG        CCCGGCGC-GC AGTTTC GCTGCGCCGGG         TTATCTGATAAGCAA 100 40
        yeiG 2290025 .. 2290037 +  -9.1  -2.74012   ACATAATGAATTTTC                CAGCG CCG CGCTG                TAATTCACCTCCTCC  66 35
 STM474_2286 2292848 .. 2292859 +    -3  -2.59431   CGAATTGCTTCTTTT                TCTT ATTG AAGA                 TGAATTATAACGCGA  40 4
 STM474_2287 2294229 .. 2294261 + -19.2  -2.98823   ATCGGTTATAACATT      CTGGCGACAGCGGC AAAAC GCGGCTGTCGCCAG      TCTCTGTCAGAAACG 100 30
        yeiH 2300323 .. 2300335 +  -4.1  -3.21218   TCACGCCTGTTAACC                CGTTA TCA TAGCG                TTCGTAATGAACCGT  48 52
         nfo 2301251 .. 2301288 + -12.9  -3.73486   TCAATGTTCTTCAGG   CAATAAAAAAGGCAGAG CGCG CTCTGCCTTTTTTAGCG    TGTTTCTCTTATGCC 100 44
 STM474_2298 NONE
        setB 2306893 .. 2306913 +  -2.6  -4.83615   AAGGATAGCTTTGCA            TATGTTTC CGTTT GTAACATA            TTTTTATGCACGCTA  72 298
        yeiP 2309040 .. 2309054 +  -5.6  -5.10665   TCGGCTGCGCCCCAG               GGCGCA GTC TGCCCC               TTTTATTTATTGACT  80 53
        yeiR NONE
        yeiU 2310976 .. 2311011 + -13.6  -4.01853   CCTATGTAATTAACA    TTACCTTCAGCGATAGT TTT AC-ATCGTTGAAGGTAA    TTTATGATGATATTC 100 41
         spr 2311998 .. 2312015 + -11.3  -4.59414   GAGACGACATAAAAA             GCACTGC TTCA GCAGTGC              TTTTGCTTATTATCC 100 77
         rtn 2313858 .. 2313870 +  -3.3  -2.96444   TAACGGATTCACATC                AGACG CAA CGTCA                CTTATTATTCAGCGA  44 55
        yejA NONE
        yejB NONE
        yejE NONE
        yejF 2319697 .. 2319710 +  -4.5  -4.09864   CCACCAGACTATTCT               CGGTGC TCT GC-CCG               TTTTGCGGAATCGGT  62 262
        yejH 2324100 .. 2324129 +  -4.9  -3.61517   GCAAAGCAGATCACT       TACCTGTTGCTGG GTCG CCTGTAGCAGGAA        TTATTAAAGAGAGAT  57 101
        rplY 2324456 .. 2324471 + -11.8  -5.68039   GAAGTTGAAGAAAAA              CCCCGC CCCG GCGGGG               TTTTTTTATGCGTTT 100 48
        yejL NONE
        yejM 2328562 .. 2328579 +  -8.4  -5.65177   AAATTCCTCGAAGAA             CCAGCC TGTTAC GGCTGG              TTTTTTTATGCCTGT 100 191
 STM474_2325 2329511 .. 2329546 +  -5.4  -4.70319   TAAAGTTTTTCAATA    TCCGCCATAGTTACGTT TTG ATCGCG-CTGTGGCGGA    TTTTCATTTTCGTAA  74 38
        oafA 2331679 .. 2331694 + -10.4  -5.54907   ATTTCAAAATAAACA              GAGGGG CTTG CCCCTC               TTTTTATTTTATAAA 100 29
 STM474_2332 2336876 .. 2336896 + -12.6  -3.63694   TCATCCAGTAAATAA            TACGCCCC TGCAT GGGGCGTA            TTATTAAACGTCCAT  95 30
 STM474_2340 2342981 .. 2342993 +  -3.3  -3.92075   TCTGGTAAGGTAAAC                GGCCT ACC ACGCC                TTTGTCGCTAACAAT  55 73
        narP 2345066 .. 2345105 + -15.6  -2.78206   CGCGGAATGCAGTAA  CAAGCCAGGCCCGGTGGCG CCG CGCCACCGGGCC-GTCAGG  GTCTTATTTCTCCTG  93 26
         eco 2358744 .. 2358754 +  -4.6  -5.49809   CCAGCGCCAGCAGCA                 GTGC AAT GCGC                 TTTTTTTGCCCTTTC  93 500
        yojN NONE
        rcsB 2368430 .. 2368458 +  -6.6  -5.24129   GACTCATCTTTTACA       GGCCGGACAGGCG ACGC CGCCA-TCCGGCA        TTTTTTATGCCCGCG  87 95
 STM474_2371 NONE
        ubiG 2378840 .. 2378850 +    -4  -6.24157   GAAATCAGCATTCGA                 TCAA ATT TTGA                 TTTTTTTTTATGAAT 100 105
        nrdA 2381406 .. 2381423 +  -3.4  -2.71144   GTAAGATCTGATGAA             TAGTGC CGGGTA GCGCTA              TGCTTACCCGGCCTA  43 30
        nrdB NONE
        yfaE 2383361 .. 2383372 +  -5.8  -3.06183   ACAGCAGGAAATTAC                TGGC CGCC GCCA                 TTAAATCCAGCTCAC  52 488
 STM474_2377 2385187 .. 2385223 +  -9.4  -2.54523   TGGCAAACGTTGCGC   CAGGCCGGATGA-GGCG TTTA TGCCCTCATCCGGCGCG    TCACTTCGACTATGG  68 82
        glpA NONE
        glpB NONE
        glpC 2392334 .. 2392349 +  -5.4  -3.88498   TGAATAATAAGAAAA              TCAGGT CTAT GCCTGA               TTTAATATATCCCCC  63 343
        sseL 2393738 .. 2393749 +  -5.8  -4.88067   TGCGTAAGGCATACG                TGCC ATCC GGCA                 TTTTTCTCAATAACT  83 299
        yfaO 2400743 .. 2400762 +  -9.3  -3.76413   GGTTATTATAATGAC            GACAGCC GCTTCA GGCTGTC             TTTACGCTTTTAACA  77 30
        yfbE NONE
        pmrF NONE
        yfbG NONE
 STM474_2396 NONE
        arnT NONE
 STM474_2398 NONE
 STM474_2399 2409429 .. 2409452 +  -2.3  -4.78149   CACTGCTGGAGCGCA          CGGCGAGAT ATTTTA ATCCCTCCG           TTTTTCAGTTCTGAC  68 415
        elaC NONE
 STM474_2410 2419362 .. 2419400 +   -11  -3.14132   GCAAAAGCGCCTGAC   GTAACAGGGGATGCCT ACAGTAC AGGCATCCCCTGACGC   TTAGTGAGACAAGCC  78 27
        yfbQ 2440933 .. 2440956 +   -14  -3.21062   ATCAATAATCTTAAA          TTCAGGCTAC TTCG GTAGCCTGAA           TTGCATCTTCATCTC  93 33
        yfbR 2441667 .. 2441694 + -10.6  -4.39166   ACCGTTCTTCCCGTA        GGCCTGATAAGCG TAG CGCC-ATCAGGCC        TTTTCCTGTCTGGGG  90 74
        ackA 2446861 .. 2446888 + -16.4  -4.37886   CTGACTGCCTGATTT        CA-CACCGCCAGC CTC GCTGGCGGTGCTG        TTTTGTAACCCGTCC 100 29
         pta 2449103 .. 2449114 +  -7.2  -3.30124   CTAATGCCGGATGGC                GGCG TGAA CGCC                 TTGTCCGGCCTACAG  63 50
 STM474_2436 2451057 .. 2451073 +  -5.7  -5.03715   GCTGTGGTTTTCACA              CGTGACG ATA CGCCGCG              TTTTTTCCGCGTAGT  84 266
 STM474_2442 2456149 .. 2456163 +  -4.2  -4.66833   TCTTCCGGTTTCTCC               TGGAGC GCG GCTTCG               TTTTTGGCGTTGCGG  71 56
        yfcG 2458881 .. 2458897 +  -5.1   -2.6381   TAGGGAAGAGGAAAT              CCTCC CTACTCT GGAGG              TCATATGCAGATTCT  48 130
        yfcH 2459816 .. 2459841 + -14.7  -4.54026   AAAGCGCCGTATCCT         GCCCGGTGAGCG ATG CGC-CGCCGGGC         TTCTTTTATTTCAGC 100 46
 STM474_2453 2464516 .. 2464526 +  -2.4  -3.77806   GCACACACAGCACCA                 GAGG TCG CCGC                 TCTTTTAATATCACA  52 332
 STM474_2459 2472021 .. 2472057 +  -4.3  -3.48474   TGCGTAATTGACATC    GGCCAGCGGCATTGC GCCGCTG GCAAAGCCATTAGCC    TTCGTTATGCATTTC  54 30
         flk 2482479 .. 2482500 + -14.5  -3.54424   CGCCGAGCGCCGTAC           CGCGTACCT GTGC AGGTACGCG            TTTCACAACCTCCAC  95 192
 STM474_2473 2484591 .. 2484610 +  -3.6  -4.63218   ATACTGTTAAAGCAT            TACGTCAT TGCT ATTACGTA             TTTTATTAACAGGAA  66 154
 STM474_2474 NONE
 STM474_2475 2485523 .. 2485540 +  -3.3  -3.71848   GAAGCATTAAAAAAG             GGAACCG CCAT CGGTCTC              TTGTTCGTACCGGAG  53 31
        mnmC 2489815 .. 2489850 +  -6.9  -4.60924   CGCTTTGACTAACGC   CTGATC-GCG-CGGCGA CAGT TCGCCGGCGCCGATCGC    TTTTTCCAGACTTTG  78 128
        yfcN 2495363 .. 2495374 +  -7.2  -3.05384   TGACCAGACCGACAT                CGCC ACAG GGCG                 TTAGCTCCGGCAGGA  57 361
        fadL 2501443 .. 2501461 + -10.3  -5.33405   GAAACGGATCAAAAA             GGTGAGC ATTGC GCTCACC             TTTTTATTTACTGCC 100 50
        yfdC 2503567 .. 2503581 +  -5.6  -2.73542   AAATGGATATAACGA               GCCCCT CCT AAGGGC               TAGTTGCAGGTTCGA  50 128
        pgtP 2511264 .. 2511282 +   -16  -3.11072   TCCTGGGGAACAGAA             GCGCCGAC ATT GTCGGCGC             TATCTATTCACTGGC 100 52
         ddg 2513692 .. 2513711 + -13.6  -4.28487   CAATGCAAAGAAAAA            CAGGAGCC ATGG GGCTCCTG             TTTGCTTTTCTACTC 100 520
 STM474_2505 2518322 .. 2518377 + -10.5  -3.61398   AGTTCCAGCTCGCGA TGTC-GTTATACCGCTGAGCCGCGCCG TGAA TGGCGCG-CTCTACGGTATAGCCGTCA TTGTTGAGCAGCAGG  74 263
 STM474_2507 2520917 .. 2520928 +  -3.6  -4.07885   GAAATTGACGCTATT                CTGG AGGG CCGG                 TTTTAGCAAAAAATG  57 8
 STM474_2508 2521388 .. 2521423 +  -7.7  -3.74227   AAGCCTCCTGCTGAA   TAACA-GCCCGATGACG CCCA CG-CATCGGGCCTGCTA    TCTTTCTGTCTTTAT  71 39
        nupC 2524242 .. 2524259 + -12.7  -5.61596   GGTTTAATGCAGAAA             CCGGGGA GCTA TCCCCGG              TTTTTTTATGCCGCT 100 46
        yfeC NONE
        yfeD 2527833 .. 2527861 + -13.3  -3.82946   CGGACTAACAAATAA        TAAACGGCAGG CGTCTGC CCTGCCGTTTA        TTCTGTTTCAGCTGG 100 33
        yfeN 2534509 .. 2534523 +  -4.9  -3.37522   GATACAGCGGATCTT               TCGCC CTCGC GGCGG               TTAATTCGCTGGCCT  54 110
        yfeH 2536732 .. 2536746 +  -7.1  -3.18383   TCAGGCACCCAGTAA               GCGGA TCATT TCCGC               TTCATCAATCACGGT  62 257
        cysZ 2540800 .. 2540825 +  -9.1  -3.10715   GTAAAAATGTATAAA         TAAGAGATGGC TTAT GCTGTCTCTTA          TTCCATACTGATAAC  68 42
        cysK 2541947 .. 2541962 +  -6.8  -5.26316   AAAACGCGTAAAAAA              GCACCT TTTT GGGTGC               TTTTTTGTGGCCTGC  87 54
        ptsH 2542548 .. 2542575 +    -2  -4.11692   GTCAAACTGATGGCG        GAACTCGAGTAAG TTT TTTTC-CGGGTTC        TTTTAAAAATCAGTC  55 14
        ptsI NONE
         crr 2544905 .. 2544922 + -12.7  -5.50499   TGCCGCAGTGAAGAA             TGGCGCC TTTG GGCGCCA              TTTTTTTGCCTGTAC 100 45
        ptsJ NONE
        yfeJ NONE
        yfeK NONE
        yfeL 2549319 .. 2549338 +  -4.2  -3.87815   GATATTCCCGCTTGT            CAAAGGCG CCGT TGCCTGTG             TTTATCCCAATCAGC  57 108
        amiA NONE
        hemF NONE
 STM474_2555 2560182 .. 2560199 +  -2.7  -3.45945   TTGAATAAAAGCAGG             CTCGT AGAAATAA ACGAG              TTCATTGTAGATAAA  48 37
 STM474_2556 2561642 .. 2561655 +  -9.5  -3.30124   CGCTTCCCCGGAGGC               GGCGC TGGC GCGCC                TTGTCCGGGCTACCA  74 91
        talA NONE
         tkt 2583238 .. 2583278 + -14.2  -3.40371   CGTTAGCAACACAGA  CTTTGCACAGTCTGCAGA CCTGT TCTGTAGGCTGTGCAAAA  TTACTTCGTAGACTC 100 47
 STM474_2581 2586912 .. 2586924 +  -5.5  -3.53012   TCTCTGTAGGCGTTA                TTGGC GCA GCCAG                TTTGGACACGGACAG  57 55
        narQ 2591200 .. 2591213 +  -3.7  -3.57561   GCAAATCGCCGGAAG               GCCAG ATGT CAGGC                TTTCCGGCGTTGGCA  53 47
        acrD 2594517 .. 2594537 +    -9  -4.78237   GTCGGGCACAAAAAA            GGCGACTT TCGTT GAGTCGCC            TTTTCTTATCCCCTA  90 66
        yffB NONE
        dapE NONE
 STM474_2587 2597182 .. 2597196 +  -5.6  -4.09864   CAAACGCCGGTGTTC               CTGCTG CGC CAGCCG               TTTTCCCGCGTCGCT  65 442
        gcvR NONE
         bcp 2604316 .. 2604331 +    -4  -3.37796   GCATTAAAAAAAAGA              GCGGCTT TCT AAGC-GC              TTGTCCCTCATCAGG  50 516
        yfgC NONE
        yfgD 2607558 .. 2607573 + -11.8  -3.12668   CGGTTAACCGTTGAA              CGCCGC CGTC GCGGCG               TATTACAGTTTCAGG  81 34
        purM NONE
        purN 2612446 .. 2612464 +  -4.6  -2.94099   TCTGCCGCCGCAAGG             TTATGCGT CTG ACGAATAA             TATGTCATCGGACAG  48 7
         ppk NONE
         ppx 2616273 .. 2616299 +   -18  -3.78022   CCGCGTAAATTGTGA         GCCAGACGCCGC GCC GCGGCGTCTGTC         TTTACTGAATCTCAG 100 33
 STM474_2608 2619334 .. 2619344 +  -6.8  -3.06569   TAAACTCCCGGTAGC                 TGGC ACA GCCA                 ATTTTCAGCAGTTCA  58 241
 STM474_2609 2620453 .. 2620472 + -12.2   -3.1996   GCACATAAATAAAAA            CCCTCTGT AAAA ACAGAGGG             TTAAATTCACCTTTA  83 490
        xseA 2625272 .. 2625294 + -12.7  -4.57474   TCATTCGCCTCAAAA          CCGGGCAGGG AACA CCC-GCCCGG           TTTTGTCTAACTTAC 100 153
 STM474_2618 2646833 .. 2646867 +  -3.4  -5.38249   ATAAACACGCAGGGG     GTTTCCGTGGTGCAGG GCG TCTGGGCCAGGGTGAC     TTTTTTATCATTGCT  84 514
        sseA 2671447 .. 2671459 +  -3.3   -2.5547   GCGCGTACCGATTTA                CCGGT TGA ACCCG                CTTAATATCCGCCAT  42 8
 STM474_2636 NONE
 STM474_2638 2672480 .. 2672495 + -10.4  -5.67967   CAGGCCACAAAAAAA              CCGCTC AATT GAGCGG               TTTTTTTGTGCTGGT 100 126
        suhB 2682963 .. 2682988 + -16.9  -2.74784   AGCGCTAAGTCTCTT         CGGCGGATGGG GCCA CTCATCCGCCG          TGCCTTTTCAGGCGT 100 33
 STM474_2651 2683976 .. 2683988 +  -5.5  -3.03028   GCGCTATCCGCTAAA                TAGCG CGA CGCTG                TATATATGCATATTT  52 23
        asrA NONE
        asrB NONE
        asrC 2687499 .. 2687522 +  -2.4  -4.82901   AAGCGATAAAGACAG          GTTTACGTAGC AGC GC-GCGTAACC          TTTTTATGGCCCGCC  68 475
        csiE 2690408 .. 2690426 +    -3  -4.72272   CAGCAAGTCGCGGGC             GCTAAACC GGC GGAATAGC             TTTTTACTCAGGGCG  70 365
         hmp 2694190 .. 2694217 +  -6.9   -4.2679   AATCCTCTGAAAAAA        CGGGCGTTATC GTTAAG GCGAACGCCCG         TTTTCCTCCCCGTTC  72 49
        cadC 2695964 .. 2695999 + -12.8  -3.23853   ATTTTGTGAAAAACA    TGTTGCCAAAAATAGC TTAT GTTAATTTTGGCAACA     TATTCATTGCAAAGA  86 97
        cadB 2697634 .. 2697648 +  -2.7  -3.53012   ACCTGCTATAGCGTA               GCGGG AGGGG CCCAC               TTTACCAGGAACAAG  48 75
        cadA 2699820 .. 2699841 + -14.5  -5.00616   GAAATAAGTACCAAA           GGGAAGTGG CTTG CCACTTCCC            TTTTTTCACGCAGCA 100 34
        yjdL 2701383 .. 2701393 +  -2.4  -3.62597   TCGGCACATCAGATA                 GCCG CGT CGTC                 TTCTTCGCCAGTACG  49 81
 STM474_2671 NONE
        yfhD 2711716 .. 2711744 +  -9.4  -4.17132   GCATTGCGCTATACT        GCCGGCCCCGCG CCTTC CGCACGGTCGGC        TTTCTTCAGAGCTTT  84 83
        yfhH 2716303 .. 2716314 +  -3.6  -4.07124   TAAATAGTCGATTTC                GGTC AGTC GGCC                 TTTATGTAAATCCTG  58 175
 STM474_2680 NONE
        yfhL 2719890 .. 2719901 +  -3.6  -4.10161   CGCCTCGCCCCACAG                CCGC AAAC GTGG                 TTTTCCCAGCTCATC  60 248
        gogB NONE
 STM474_2691 2729928 .. 2729948 +  -8.3  -2.86722   GGCGCTGGACAAGTG            TGATGCGGA TAA TCCTCATCA            TATGGTCATGTATTT  65 365
 STM474_2693 2731086 .. 2731096 +  -5.4  -3.91897   CAACACGGTTTACCT                 GTAC CCG GTAC                 TTTCTCCATGCCAGA  61 184
 STM474_2708 2747197 .. 2747211 +  -2.7  -3.41671   CCTCAGTTGTTGTTT               CAGGG CATAC CCCAG               TTGCTTCGGTATTTC  47 107
 STM474_2719 2756626 .. 2756641 +  -4.7  -5.64421   GCAGGTAAGCTCCTT              TTCCC TCCTGC GGGAA               TTTTTTATTTGCACT 100 241
 STM474_2723 2759255 .. 2759273 + -11.8  -3.76641   CTTTCATTCTAATCT             CTCCTCTT CTT AAGAGGAG             TTTAGCTATTGGGAT  93 437
 STM474_2741 2768913 .. 2768926 +  -4.5  -4.36063   CCAGCCTTCATCAAG               TGCCT AGAC GGGCA                TTTTCATAATGTTAT  66 105
 STM474_2742 2770156 .. 2770173 +  -9.8   -5.4756   GCAACAATAATTTAA             CCCGGC CACTGT GCCGGG              TTTTTTATTGCCCTT 100 111
 STM474_2743 NONE
 STM474_2744 2771053 .. 2771067 +  -4.2  -3.12327   ACCCAATGGGCGCTA               TCTCTG GCC CGGGGA               TCTTACATCTAAAAA  47 124
 STM474_2745 NONE
 STM474_2746 2775437 .. 2775453 +  -5.1   -4.3898   CGGGAGGGGGTACGC              CCTCC CACCTGA GGAGG              TTTTATGCGCCTAAT  68 47
 STM474_2747 NONE
 STM474_2748 2776399 .. 2776411 +  -3.3  -3.97102   TTCAGGGATGATCGG                GCGGA TTA TCGGC                TTCTTACTTTTCCGT  56 402
        nadB 2782774 .. 2782804 +  -7.4  -3.21099   TGTAACGCGCCTGCT       CCCGCTGCGGCGTG GCG CATTCCACACCGGG       TTCGTAATAAGGCGG  59 336
        srmB 2784657 .. 2784678 + -14.5  -5.80817   GAAGAGTGATGATAA           TGCCGGGTT CGTT AACCCGGCA            TTTTTTTATCTTCCA 100 32
        yfiK 2786274 .. 2786298 + -14.3  -3.94877   CCAAATAAAACAAAA          GCGGAAAAGGC CCG GCCTCTTCCGC          TTGTTATTACCGGAT 100 42
         ung 2787745 .. 2787758 +  -9.5  -3.48276   TATCGCCCGGATAAC               GGCGC GAAA GCGCC                TTGTCTGACCGGGCG  75 60
        trxC 2789493 .. 2789513 + -14.7  -4.16943   GCGCTGTAAACGCCA            CGGGGCGCA TCT TGTGCCCCG            TTTTCACCTCTGCCA 100 32
        yfiP NONE
        yfiQ 2792984 .. 2793008 +  -2.1  -2.74269   TGTTGACCACTTTAA          CGGGTACTGAT GTT ATTATTGCTCG          CTTATGTCGTCTGCA  40 56
        pssA 2794430 .. 2794446 +  -9.4  -4.66938   ATCCTGTAATCGAAG              CCCCGT CCTGT ACGGGG              TTTTCTCTTAGGAGT  91 32
        yfiM 2794989 .. 2795002 +  -3.8  -2.74144   GGCGCGAACCTGCGC               CGGA AACATC TCCG                CTTTCAGGATCCCGC  43 223
        yfiO 2807830 .. 2807849 +   -15   -5.8187   TACAAACAAGCAAAA            CGGCAGCC TTCC GGCTGCCG             TTTTTTTATTCGGTA 100 46
        yfiA 2808445 .. 2808460 + -11.8   -5.4505   TGAGTGTATCGCCAA              CGCGCC TTCG GGCGCG               TTTTTTGTTGACAGG 100 51
 STM474_2779 2808619 .. 2808639 +   -14   -5.5112   GAAGACGAACAAGAA            GGCCTCCC CCACC GGGAGGCC            TTTTTTATTGATAAC 100 49
        pheA 2810000 .. 2810016 + -12.3   -3.0497   CCATCGTCGGACAAC              GTACCGG CAA CCGGTAC              TCTTCCAGCTGCTCT  76 195
        yfiR NONE
        yfiN 2815223 .. 2815245 +  -6.8  -4.30995   CAAACCCATAAAAAA           GGGGCCAGCG TAA TGCCAGCCCC           TTCTTTTCTACAAGC  74 119
 STM474_2788 NONE
 STM474_2789 NONE
 STM474_2790 NONE
 STM474_2791 2819211 .. 2819221 +  -2.4   -3.9461   AATTTAATGGCGTAA                 ACCC GCC GGGC                 TTCTTATTGCCCGAA  53 51
 STM474_2792 NONE
 STM474_2793 2820088 .. 2820101 +  -6.7  -2.74784   GTGGTTTCCAGCTAT               GTGGA CAAT TCCAC                TCAATTTTCCGACCT  55 409
 STM474_2794 NONE
 STM474_2795 NONE
 STM474_2796 2824815 .. 2824832 + -12.7  -5.31275   AGAACACATTAGCCA             TCCCCGC TATT GCGGGGA              TTTTTTATAGTAAAA 100 104
        corE 2830744 .. 2830779 +  -9.1  -2.63479   TGGAACACATCTCCA    CCACCACGCTGATTA TCATAT TAATCATCATGGTGG     TCATCTCGGCCTATT  66 61
 STM474_2803 2832021 .. 2832038 + -11.3    -5.252   GCGGAGTAACACAAT             GGCGAAC TCCG GTTCGCC              TTTTTTATCGCCGTC 100 32
 STM474_2804 2833193 .. 2833235 +  -2.7  -5.14563   AACACGGTGTCGCGT TCGCGAGTCTGG-GCTTCTG CAAG CTGAACTTCCAGATTCGCAA TTTTTTCATCGCGCG  79 478
        ppnK 2834384 .. 2834412 +  -3.3  -3.92178   TTACGTTAGCCTCTT        TACTGTATAAA AAACCAG TTTATACTGTA        TTTAATTACAGTCAT  55 43
        recN NONE
 STM474_2808 2836889 .. 2836900 +  -4.4  -4.85782   TTTTACCGGACGACT                GTAG ATAC CTAC                 TTTATTTTTCGCCAG  77 314
        smpB 2838168 .. 2838196 + -13.3  -2.53613   AATAGACATTTTTTG        TGACCAGCTTC TCAGTAT GAAGCTGGTCA        ATGTTCATATCTCAT  84 39
 STM474_2812 NONE
 STM474_2813 NONE
 STM474_2814 NONE
 STM474_2815 2855509 .. 2855532 + -13.2  -5.34309   CACCAAATAAAACAA          GGGGTTACGT GAAA ACGTAGCCCC           TTTTTCTTTGGTAGT 100 470
 STM474_2816 2856111 .. 2856129 +    -3   -4.7254   GAAGCAACCCCGCGC             TGCAGGCG TTC CCACTGCA             TTTTTGCTGCGCGCT  70 447
 STM474_2826 2863874 .. 2863900 + -13.2  -2.95774   TCAAAAAAATAGCCA         TTGCTGCTATAT AAC ATATAGCAGCAG         TCTCTACTACATATC  86 173
 STM474_2845 NONE
 STM474_2846 2877641 .. 2877653 +  -3.3  -4.96468   CTCTAAAATGTCTCT                AGCCA GTT TGGCA                TTTTGTTTAGGTTTG  74 448
 STM474_2858 2885825 .. 2885838 +  -2.3  -5.02074   AAAATGTCTCTCGCT               CAGCT TTTA AGCGG                TTTTTTAACGCCTCA  69 40
 STM474_2861 NONE
 STM474_2862 NONE
 STM474_2863 2889925 .. 2889950 + -10.3   -5.4492   GGTGAAGTACAGAAA         GCCCGCACAGC ACAA GCCCTGCGGGC          TTTTTTGTGTCTGTC 100 220
 STM474_2864 2891671 .. 2891687 +  -5.2  -4.17316   GATCACCAAAGAACT              CATTGA AAACC TCAATG              TTCTTTTCCAAACCT  65 427
 STM474_2868 2896352 .. 2896373 +  -5.9  -3.78962   TAAAGGAAATAGAAA           TTGCTGCAT TGTA ATGCAGTGA            TTTGCATCTGTTTGC  61 175
 STM474_2869 2896934 .. 2896948 +  -7.8  -5.77988   CTAACGGCGACACCT               GACGCG CCA TGCGTC               TTTTTTTGTGTCTAT 100 154
 STM474_2870 NONE
 STM474_2871 NONE
 STM474_2872 NONE
 STM474_2873 2900251 .. 2900267 + -13.7  -5.47218   GAAATAACCTTCCCT              GACCGGC ATC GCCGGTC              TTTTTTTACCTGCAA 100 34
 STM474_2874 NONE
 STM474_2875 NONE
 STM474_2876 2902719 .. 2902750 +  -5.8   -3.5365   GTTCAATAGGTTGAT      GCAACGCTATCCTT AATC AAGGGGGACGTTGC       TTGTGTAACATTTAA  57 125
 STM474_2877 2904322 .. 2904339 +  -5.5  -3.36492   GATGTAGGCTGCTGA             TTTCCGC TTAA GCGGAGG              TTATCAGGTTAGGGA  56 145
 STM474_2879 NONE
 STM474_2880 2908255 .. 2908284 +  -6.5  -4.11394   AAAAAGTGGTACAGG       GTGGGACAG CCGTTGCTAAAT CTGTCCCAC        TTTTCCGACTGGCAT  68 145
 STM474_2881 NONE
 STM474_2882 2910815 .. 2910842 +  -9.3  -4.56597   AAAAAAATAGCGAAA        TACACCGTTTC AATACC GAAATGGTGTA         TTTTTCAGAAAAAAA  88 56
 STM474_2884 NONE
 STM474_2885 NONE
 STM474_2886 NONE
 STM474_2887 NONE
 STM474_2888 2914686 .. 2914711 +    -9  -3.18796   AGATGTTTAAACAAA         C-GGCGCAGGG TAGCT CCCTGTGCCAG         TTCCATATGATTTTG  70 31
 STM474_2889 2916468 .. 2916498 +  -9.8  -2.87211   TTGCGCCCTGCTGCC      TGCTGGTCGGTGC CTGTGT GTACCG-CCAGCA       TATCTGCCCCCGCCT  65 316
 STM474_2894 2922178 .. 2922220 + -17.1  -3.95555   AGAACAATTAAAATC T-ACACCCGCAAAGGCTCGC TTTA GCGAGCCTTTGCGGGCGGCA TTTCTGGATAATTAT 100 315
 STM474_2895 2923860 .. 2923873 +  -3.9   -2.7736   ATATATATTGAGCAG               GTATA CGGG TATAC                TGATTGAATCTCACT  45 5
 STM474_2896 2925981 .. 2926010 +  -4.9  -3.24755   CCATACGAATATATG       GGCCATAACGATG CTTT CACAGGTATGGCC        ATTTATTTGGCAAAT  52 86
 STM474_2903 NONE
 STM474_2904 2934645 .. 2934662 +  -5.5  -2.78463   CCCCATATAGCTTCA             GCATTGC ATCA GCAAAGC              TGTCATCCAGCGCGT  50 251
         hin 2938322 .. 2938335 +  -2.4  -3.66908   GCCTGGCATAACATT               GGTT ATCAAA AACC                TTGGTTTTCAAGAAC  49 357
        iroB 2940089 .. 2940120 +  -2.3  -2.97021   GCAGCGCAATGACAA      TATGGCGGCTGAAC CCAGC GTGT-GTCGCCATA      TCTCATCTTTCACCG  41 46
        iroC 2943841 .. 2943863 + -13.5  -3.77831   AAAGAAAGCCCGCAA           GCGGCTGTT CATGT AACAGCCGC           TTTAGCTATTGATAC 100 64
        iroD NONE
        iroE 2946383 .. 2946398 +  -3.2  -4.87291   CTTCACTACGCGACT              CCGC ATGTGTTC GCGG               TTTTTGCTTGCCGTA  74 285
        virK 2951903 .. 2951926 +  -3.2  -4.18802   ATACGCGGATGTGCA          GATCCTGCT ACCGTTC AGC-GGATC          TTTTGAAATCTGTAT  60 50
      mig-14 2953077 .. 2953105 + -13.3    -3.445   TGCTAAAAAGAAAGC        CTGGACGTAAATA TGT TTTTTACGTCCAG        ATTTTTCATAAATCC 100 35
 STM474_2920 NONE
 STM474_2921 NONE
 STM474_2922 2960159 .. 2960189 +  -2.5  -3.57263   GGCCTACGCGCTCAT      GTG-T-CAGGCCGGG CAA CCCCGCCAGCATCAC      TTTCCCCATAACGCT  50 70
 STM474_2923 NONE
 STM474_2924 NONE
        ygaF NONE
        gabD NONE
        gabT 2965482 .. 2965493 +  -2.2  -3.30124   GCAGCGTCGGGTGGC                GACG TAAC TGTC                 TTATCCGGCCTACAA  45 51
        gabP 2966989 .. 2967010 + -10.1  -2.57931   AAACCTACGTTAGTT           ATTCCCGGC GTCA GCCGGGAAG            CTTCTCAGGAGTAAA  70 28
        ygaE 2968053 .. 2968064 +  -7.2  -4.93288   TCACTTTGTCAGCGT                CGGG TATT CCCG                 TTTTATTTAAATGTT  91 373
 STM474_2932 NONE
        ygaP NONE
 STM474_2934 2969728 .. 2969779 +  -4.3  -3.07522   TTATCAAAATGAGCA TGGCGCAACGTTCCCTGAGTC CCGGTTAATA GAGACAGGAAACGAAGCGCCA TCTGTTAAAAGCTAT  49 42
 STM474_2936 NONE
 STM474_2937 2971358 .. 2971382 + -15.7  -4.35675   AGGCGTAAGTTAGCG          TCGCGACTGGC ATT GCCAGTCGCGC          TTTTAGTCGGTTTTT 100 33
        ygaM 2972314 .. 2972339 +  -3.9  -2.61695   CGAAACGGTTACTGT         ATCGCCTGTCG AAGC TGACATGCGAC          CTGTTTCGCCATGCC  44 116
 STM474_2941 2974151 .. 2974165 +  -2.8  -3.62597   GTCTGGCGATCGGTA               TGCG AATGTGA CGCA               TTGTTGCCGGATGGC  50 15
 STM474_2942 2974384 .. 2974403 +  -6.3  -4.67635   CAACACACGACAATC            CGACGCG TTTCAT CGCGCCG             TTTTCTCATTTTAAA  78 75
        nrdH NONE
        nrdI NONE
        nrdE NONE
        nrdF 2978180 .. 2978211 + -13.2  -4.41616   ATTTTTAACCTTACG      GGCATGGGAAAT AACGTTAC ATTTCCCATGCC       TTTATTTCAAGCAAT 100 33
        proV NONE
        proW NONE
        proX 2981974 .. 2981992 +  -3.2  -3.51924   CAACATCCGCTATGA             TTGTTTTC CCA GGAAATAA             TTATCTGAATCACGA  50 148
 STM474_2950 2983623 .. 2983637 +  -5.8  -4.29621   CTGAAAGAATGATTT               TGTATT AAT AATACA               TTTACTTTATTTGTC  67 448
        mprA 2984275 .. 2984298 +  -7.4  -3.85817   ACAGGAAAGCGGACA          GGCCGGCA CGCGTTAC TGCTGGCC           TTTCTGACAACAGGT  68 73
        emrA NONE
        emrB 2987095 .. 2987110 +    -9  -5.14563   AACTATCTGATAAAA              GGGATC TGCG GATCCC               TTTTTTAGTAGACCA  93 39
        srlA NONE
        srlE NONE
        slrB NONE
        srlD 3003562 .. 3003583 +    -3  -2.52896   GATCAACGTAACCGG           CGGTCA AGTGATGTTC TGACCG            TGAATTGCCGGATGG  40 7
        gutM NONE
        srlL NONE
        gutQ 3005962 .. 3005989 +  -9.1  -2.64155   CTTCAGTCCCAGACG        CTTCGCCAGCC GATGCA GGTTGGCGACG         TCGGTTTCCAGCGCC  66 43
 STM474_2978 NONE
        ygbD 3010236 .. 3010248 +  -4.7  -3.30124   GTGATGCCGGATGGC                GCCGC TTC GCGTC                TTATCCGGCCTACGA  52 45
 STM474_2992 NONE
        hypA NONE
        hypB NONE
        hypC NONE
        hypD NONE
        hypE 3026136 .. 3026147 +  -7.2  -2.99325   TTAACGCTGCATGAA                CGCC TGAT GGCG                 CTTTGCTTATCAGGC  60 99
        fhlA 3028563 .. 3028603 +  -9.6  -4.72272   ATCTCCTCGCGTTTA  GCCGGCTGATAGCAGTGC ACCGG GCACTGCTTACAGGCGGG  TTTTTCCTCGCCAAA  95 229
        sitA NONE
        sitB NONE
        sitC NONE
        sitD 3032574 .. 3032586 +  -4.8   -4.2711   GCATTGTTATCGAAT                CGCT CATAA AGCG                TTTCATTCTTTTTGT  66 221
        hilD 3041612 .. 3041644 + -11.3  -4.81163   GATGACACTATCTCC      TTCCGGCTTTAACCC TGT GGATTAAGGCCGGCA      TTTTATTCATATTTA 100 296
        hila NONE
        iagB 3044605 .. 3044638 + -12.7  -4.05669   ATAATTATACAGAAA     TAGCTTACTTTCAGA TAGT TCTAAAAGTAAGCTA      TGTTTTTATCAGCTT 100 37
        invH 3067562 .. 3067579 +    -7  -6.02919   CTGCTTTTTGATACA             GCAGCA CCTCGC TGCTGC              TTTTTTTATTTGTGA 100 179
 STM474_3041 NONE
 STM474_3042 3068709 .. 3068725 +  -2.3  -3.63054   ATTTCATATACTTTT              CAAATTA AAA TAATGTG              TTGTATCTACCTTTC  49 114
 STM474_3044 NONE
 STM474_3045 3071158 .. 3071175 +  -7.7  -3.34715   TAATCAATAAAGTGT             TGCGCGA GAAA TCGTGCA              TCTTTCAAGCACATC  65 461
        pphB 3072379 .. 3072389 +  -6.8  -4.01902   CTGAACTAATTGCCT                 GGCA GCT TGCC                 TTGTTTCGTCAATAT  68 401
        mutS 3075873 .. 3075890 +  -6.9  -3.34652   TGATCTTTCCTTTTT             CAGGCAC AGAA GCGCCTG              TCTATTGTTTAGACA  61 476
 STM474_3052 3078080 .. 3078117 + -10.6  -2.77416   GCACGCCCCATCATC   GTAGCCAGTCCGGGAGC ATTGC GCTCCCGGAC-GGATAA   TACTGTCTTAATCCT  74 22
        ygbI 3085154 .. 3085167 +  -9.5  -3.11459   CCAAACAATAGCGAA               GCGGC GCAA GCCGC                TTACGTCATCATCTT  71 30
 STM474_3061 NONE
 STM474_3062 NONE
 STM474_3063 3088017 .. 3088036 + -13.6  -5.40072   AAACGGTAAAAAAAA            GGCCAGTC GACA GACTGGCC             TTTTTTTGACAAGGG 100 32
         iap 3099176 .. 3099199 +  -6.6  -4.60255   GCTGGTGAAACGTGT          TTATCCCCGC TGGC GCGGGGAACA           TTTTTCAGCCCTTGT  79 44
 STM474_3077 3100497 .. 3100520 +  -5.3  -4.18018   AACCAGACGGCAAGA         CGT-CC-CCGC AGGC GCGGCGGTACG          TTTTCCGTGACCACA  65 358
        sopD 3110143 .. 3110159 +  -9.4  -4.72272   ATAACCAATTTAAAA              TCCGGC TGCCT GCCGGA              TTTTTCATAGCAGCA  91 55
        ptpS NONE
 STM474_3093 3116721 .. 3116747 +  -7.3  -3.41222   TAGCGTAAGCTGGCG        GTTTATCCCCGC TGGC GCGGGGA-ACAC         TATTTCGCCTTCGGC  63 300
        barA 3130751 .. 3130765 +  -8.5  -3.30124   TGATATTCGCCGGAT               GGCGG CGTGA CCGCC               TTATCCGGCCTACAA  69 38
 STM474_3108 3136512 .. 3136531 + -10.7  -2.78679   GCAAACGAAAAGGTA            CCCTCCC GTAGGG GGGAGGG             ATTTACCTCAGGAAA  74 148
        queF NONE
        ygdh 3141676 .. 3141702 + -13.7  -2.62425   TGCGCTTAACGCTTA         TGCCCGGTTGC CGCCA GCAGCCGGGCG         CTTCTCCCATTCCTT  86 32
        sdaC 3143532 .. 3143550 + -13.1  -3.61902   CAGCTAAGTCCTTTA             GCGCCGC TTACC GCGGCGC             TTCTCTATGATACAA 100 34
        sdaB 3144976 .. 3145004 +  -7.5  -4.69053   TTTTAGGATCTGTAA       GCCGGATAAGGCG CTCGC CGCC--ATCCGGC       TTTTGTTGCCTGATG  82 52
         xni 3145858 .. 3145875 +  -5.5  -4.63932   GGAAACTTACAGCAG             CTACGGC TGGC GCGGTAG              TTTTGTTGCCGGATG  74 8
        fucP NONE
        fucI 3151528 .. 3151542 +  -4.2  -3.94381   GCCGGATAAGCGTAG               CGCC ATCGGGC GGCG               TTTATGGAGTTATCT  57 96
        fucK NONE
        fucU 3153414 .. 3153432 + -13.1  -3.17212   AATCTCTTGCCGGTG             CGCCCGC ATGAC GCGGGCG             TTCATCGAATGATGG  91 39
        fucR 3154177 .. 3154223 + -10.9  -4.88736   ATCGTAGACCGGATA AGCGT-GC-GTCATCCGGCGC TGATGAC GCGCCGGACGACGGCAACGCG TTTTTATCGCTCGTC 100 34
        csdA NONE
        ygdK 3159299 .. 3159317 +  -3.8  -2.57683   AGGAGAACTGGAAAA             TTCATACG CAT CGGGTGAA             GTTATAACAGGATAT  44 258
 STM474_3132 3160609 .. 3160620 +  -2.2  -2.79327   ATGGTTTTCGCCAAA                TCAG CGAC CTGG                 ATTTGCGTCGGATCG  39 381
        argA 3165724 .. 3165737 +  -4.5  -3.32963   TACGCGTCGCCATCC               GGCGA GAAC TCGTC                TTATCCGGTACGACT  52 114
        mutH 3185662 .. 3185681 +  -9.2  -2.91199   TTCAGCCTGGGCTTT            CGCCCGTC ACTC GACGGGCC             TATAATTACCGCTTC  67 149
        ygdQ 3186438 .. 3186466 +  -9.6  -2.82263   ATCCGCTGTAATCCT       GT-CTCGCTCCCC CGCC GGGGAGCGAATAC        TCACTTTATTTCCTT  69 30
        ygdR 3186823 .. 3186847 +  -3.5  -3.30159   TCATCGAACGTTAAG          CGGTGGCCT GTGATCG AGGTCAGCG          TTCTGCAAGCCTTCA  48 27
         tas 3188419 .. 3188436 +  -5.5  -2.78596   AGCAACAAGGCATAA             GCAGGCA GCAA TGCGTGC              TGTAATGAGAAGATC  47 392
        galR NONE
 STM474_3159 3194171 .. 3194183 +  -3.3   -3.1634   TTCAGAGCATCTCCA                GCGCT AAC AGCTC                TTCAATGGTTTGACG  46 49
        lysR 3196893 .. 3196919 +  -7.3  -2.57211   CGTGCGCGATTTTAT         GCATGGTGTTG GTACA CAGCACAATGC         CTTCTGCGCCCGCCT  54 446
 STM474_3168 3203925 .. 3203947 +  -3.4  -4.62708   AAACGCCCCCAACTG           ACGCTATTTA TGG TAAATTGCGC           TTCTTTTTGTGTGTT  66 107
 STM474_3169 3205224 .. 3205247 + -12.5  -4.53303   GGCTAAAGTAAAAGA          TAGCCGGGA TATAAC TCCCGGCTA           TTTTATATAAGAATC 100 35
        yohM 3206567 .. 3206584 +  -4.9  -3.84985   ATGAAAGGCCATACA             TTCA-GCG TCC CGCCTGAA             TTCTGTATTTTACTC  59 117
 STM474_3183 3218271 .. 3218301 +  -8.4  -3.30701   GGCAAGAGACTTACT      G-GCTGACTGGCGA TTAAT TCGCC-GTCAGCAC      TTCGGTTTACTCCCC  69 286
         idi 3219898 .. 3219930 + -14.2  -3.82865   CGCCTGAACGAAGAG     ATGCCGGATGGCGGC TGAT GCC-CCATCCGGCAA      TTTACATCTTATTTC 100 60
        fldB 3226704 .. 3226727 + -12.4  -3.37245   GTACTTCCCTCTCGA          CGGAACCGCG TTTA CGCCGTTCCG           TTAGTGTTGGCCTGA  90 54
        ygfZ 3228634 .. 3228671 +  -9.1  -2.81872   TATCACGTTAAAAGC   CG-GATAGCCTGATAGCG CAA CGCCATCAGGCTCGCACG   TGCTGTTCTCGTAGG  66 41
        bglA 3231469 .. 3231494 + -13.3  -2.73007   GCTTTAACTCCTGCA         CGTTACCCGCC AGTC GGCGGGTAACA          CTTTGAACGAGTCTT  85 34
        ygfE 3242783 .. 3242804 +  -8.1  -3.28791   TTTGAATAACACTTT           TCGCTTTAC TATG GTAAAGTGA            TTGTGAAAACAGAAT  65 32
        ygfA 3243789 .. 3243808 + -11.4  -3.71649   CCTTTCCTTTTTAGA            GCCCCTGC CTCG GTAGGGGC             TTTCCCGTTTCAGCG  91 196
        iciA 3247590 .. 3247606 +  -7.9  -3.84246   TCCTGCGCAGATACC              GGCGCAG CAT CTGCGGC              TTTCATCATTCGCAC  68 412
 STM474_3218 NONE
 STM474_3219 NONE
 STM474_3220 NONE
 STM474_3221 NONE
        cysA 3257074 .. 3257093 +   -15  -4.42619   AGGGAGAATAAAAAA            CGGGTCGC CGAA GCGACCCG             TTTTATGCCGTATTA 100 30
        yggG 3260161 .. 3260172 +  -7.2  -3.30124   ACAGTGCCGGATGGC                GGCG TGAA CGCC                 TTATCCGGCCTACAA  63 48
 STM474_3231 3267828 .. 3267855 +  -4.2  -4.58663   AAAAAATCATCAAAA        TCTTCCAGC-GAA TCA TCCTGTTGGAAGA        TTTTTACCAGCTCAT  71 368
        metK 3273604 .. 3273622 + -12.4  -4.08546   TACCGTACTTATCAA             GGCCAGCG CTC TGCTGGCC             TTTATCATTGCTGAT 100 80
        galp 3275445 .. 3275471 +   -21  -5.08601   CGACTAATCCCTCCA         CGCTTCCTCCTG CCA CAGGAGGAAGCG         TTTTTCTTGCAGTCC 100 34
        sprT 3276012 .. 3276032 +  -9.7  -3.72695   ACTGGTCGCCGGGTA            GTTCCCGAA ACG TCCGGGAAC            TTTCCTGAGCGGACT  79 25
        endA NONE
        yggJ NONE
        gshB 3278702 .. 3278724 + -10.6  -3.51924   TTGCCCGATAAGGCA           GCCGTCCTTT GGC AAAAGACGGC           TTATATGAGTGACAA  81 138
        yqgE NONE
        yqgF 3279825 .. 3279849 +  -2.2    -3.794   ACGCGGTCACGGTTG         CCAGGCTTACT GGGC AATAAGC-TGG          TTTAGTGCCTTCAGC  51 66
        yggS NONE
 STM474_3249 NONE
        yggU NONE
        yggV NONE
        yggW 3285061 .. 3285080 +  -2.9  -4.13561   ATTTAATAACCCCTT            TAC-GACG CAAAT CGTCCGTA            TCTTTTTTCCAGCGC  56 133
        mutY NONE
        yggX NONE
        mltC 3292105 .. 3292116 +  -5.8  -4.11751   ACACCAAATCACAAC                GGCA AATG TGCC                 TTTTAAAACATTCAT  65 189
        nupG 3293424 .. 3293475 + -14.7  -3.51708   CATTAATCCTTGCCC TGTT-TC-GCAGGCCGGATAAGGTG TAAA TGCCTTATCCGGCCTGCAGGCAACG TTACTTTAAAACATA 100 35
 STM474_3263 NONE
        yqgA 3296873 .. 3296894 +  -8.1  -2.85784   GCTCAGTCGGTAGAG           CA-GGGGATT GAA AATCCCCGTG           TCCTTGGTTCGATTC  61 155
 STM474_3270 3301484 .. 3301509 +    -7  -3.53811   TATTTTCACTTTATC         CGCATAATTT GCTGCG AGATTATGCG          TTTCCAGGGGGTCAC  60 268
 STM474_3273 3305492 .. 3305508 +  -7.2  -3.67402   AAGCGTGCTTTTTAA              CCCGCG TCAAT TGCGGG              TCTTTTCCCCATTGT  67 41
 STM474_3278 3311213 .. 3311225 +  -7.7  -3.08312   AAGGTGGACTGTCTG                CCTGA TTA TCAGG                TTCGCTCGCTGCGTT  62 79
 STM474_3281 3312657 .. 3312667 +    -4   -4.1648   TTTTCTTAATACTCA                 CATT ATA AATG                 TTATTTGCTTATTAT  62 59
 STM474_3285 3318023 .. 3318047 + -16.5  -3.62275   GCAAATAACCTTCTT          TCGCATGGCGC GAC GCGTCATGCGA          TTTCCCCTACTCAAT 100 33
 STM474_3286 NONE
 STM474_3287 3321322 .. 3321332 +  -3.2  -4.65263   TAATAACTTATGACT                 TCAC AGT GTGG                 TTTCTTTTAACAAAT  66 325
        yghU 3326007 .. 3326039 +  -7.8  -2.76468   AAAGTTAAACCATAA     TGCCGGATGG-GGTA GTAA TGTCGTCATCCGGCA      TGGTATTCCCTGCTG  60 33
 STM474_3306 NONE
 STM474_3307 3339223 .. 3339240 +  -2.7  -2.91681   TCGTTCTGATTCTCC             CTCTTAC GGTA GTAAAAG              TGTCTACGCTTAAAG  42 89
        yghA 3340186 .. 3340215 +  -6.3  -3.55444   ATGAAGTCGATTAAG       GTGGCGCAATTCT GTTA AGCAAGGCGCCAC        TTTAGGCAATAAAAA  60 44
        metC 3342908 .. 3342936 +  -4.5  -4.20516   GGGGATGGACATATA        TGCAGACAATTTC CGT GGAAAAGTCTGCG        TTTGTTGCGTCCGGG  64 48
        yghB 3343691 .. 3343718 +  -5.6  -2.60392   AACGCCTGACGTATC        CATAATC-GGCCA GGA TGGCCCGGTTACG        CTTCGTTGACCCGTG  50 32
        yqhD NONE
        dkgA 3346958 .. 3346977 +   -15  -5.15969   TTTATCGCACGCCAT            GCCCGACG ATGT CGTCGGGC             TTTTTTGCATTCCGA 100 47
 STM474_3317 NONE
 STM474_3319 3349477 .. 3349491 +  -7.2  -2.73334   TATACAAGCATCATG               CCTTAA TCA TTAAGG               TAATATATAATTAAT  58 415
 STM474_3322 3353292 .. 3353310 + -12.4  -3.56821   ATATGTAAATCTGCC             GGGCAGGG TTC TCCTGCCC             TTTACAGGATGTAAT  93 33
 STM474_3323 NONE
        ygiK 3355178 .. 3355192 +  -7.1  -2.73124   CGGACGCTTTACGAC               GCTGG ATTCA CCAGC               ATTTGCCCAATCGAG  58 77
        ygiX NONE
        ygiY 3363512 .. 3363536 +  -4.3  -3.67068   TAAGTTGGTAACAGA          GACTTTTGC CAAAAAC GCAAAAGAC          TTTGCACATTTTGCT  55 30
        mdaB 3364179 .. 3364191 +  -4.1  -3.10894   ATCGCAAGCATCTGA                GCGAA ATT TTTGC                TTAACTGGTCATCCT  47 9
        ygiN 3364560 .. 3364604 +  -7.3  -2.64794   ATTACCCTCGTCTGA CGTCGC--CCTGATG-CGATGC GCAA GTGTCGCCATCAGGCTGCGGCG TCATGTCGGATTCGC  57 44
        tolC 3370757 .. 3370814 + -22.9  -2.78384   ATTGATAAGTTATTC GCTGGCGCTGCGCTTATCAGACCTGTG CCCT TGTAGGTCTGGTAAGCGCGGCGCTACC TGTCATAAAGCCGCG 100 36
        ygiB NONE
        ygiC 3372810 .. 3372839 +  -8.5  -2.71681   GATAGATTCTCCTGT       AAGCCCGATGCGCG TAG CGC-CATCGGGCAA       TCATTCAGCGCCTTA  64 36
        ygiE 3374810 .. 3374823 +  -2.5  -3.61178   GGCAATAAACATCCT               TTTTA CCCT TAAAA                TTTAACATCACTAAA  50 272
 STM474_3346 NONE
 STM474_3347 NONE
 STM474_3348 3378405 .. 3378430 + -15.5   -4.3898   AATAGATAAACCAAA         GCAGAGGTCTG CATT CAGGCCTCTGC          TTTTCTCACAATAAT 100 45
        yqiC 3379954 .. 3379971 +  -8.3  -2.64243   AGAGTAAAAACGTGA             ACGGGCC TGAC GGCCCGC              TCATATAAGATCTGA  63 34
 STM474_3352 NONE
        yqiK 3382824 .. 3382845 + -12.3   -5.9667   CCGCCATATCTCCTG           TCCCTGGTC ATAA GACCGGGGA            TTTTTTTATCTTTTT 100 45
        ygiM NONE
         cca 3391163 .. 3391206 +  -6.6  -3.28712   GCCCGAACCCCGCCA GCTAAACGCCATCCGGCA CGATAAAT TGCCTGATGGCGCTGCGC TTATCAGACCGACAA  61 21
        ygiH 3393485 .. 3393507 + -11.2  -3.97406   TTGCTGTAAACCCGT           TGGGGCGGCA TGA TGTCGCCCCC           TTTCTCCGCTTTTAC  91 242
        rpsU 3395025 .. 3395051 + -10.9  -4.40882   AGTTGTAGTTGTAAG        GCCGTGC-TTCC GAAA GGAATGCGCGGC         TTGTTTTCGTTTATG  90 75
        dnaG NONE
        rpoD 3398973 .. 3398990 + -14.1  -5.60993   CCGCACACGTATAAA             CGCCGCC GCAA GGCGGCG              TTTTTTTATCAGGCC 100 45
        yqjI 3401499 .. 3401557 +  -5.3   -4.2349   GCGCTGGAAATCGCC GAACTGGATTAAGCGGGCTGCGTGTCCTC TTC GCGGACGCGGAACACG-TTAA-CCAGCTC TTTTAAATGTAACGC  65 14
         oat 3406797 .. 3406822 +  -8.3  -2.78211   AGGTTTAAAAACGAT         GCCGGAT-GGCG CTG TGCTTATCCGGC         CTGTTTTCCCCGGGT  64 33
        fadH 3409008 .. 3409058 + -13.5  -3.29144   GGCGCTACGCTTATC GG-GCTTACGCCGTCATACCGGTTT TAT AGGCCGGTATGACG-CTTGAGCGCC TTATCGACGGCGTCC 100 55
        ygiP 3410865 .. 3410880 +  -3.2  -2.88427   TCATTGCCTGCCGCC              ACGTCA AGGA TGACGA               TCTGTAGAGGGTATT  44 112
        ygjQ NONE
        ygjR 3412929 .. 3412954 + -15.5  -6.79027   TATGCATAAAAGCAA         CGGCTAATGCC ATTC GGCGTTAGCCG          TTTTTTTTTTTTGCA 100 245
        ygjT 3413984 .. 3414010 + -15.2  -5.28942   CTGCCCCGTCAAAAA         CGCCCGACAG CGCACAC CTGTCGGGCG         TTTTTGTTTAACATG 100 59
        ygiU 3415425 .. 3415437 +  -6.2  -3.08133   AGAGGACGAACGTCT                GGCG AATAA CGCC                TTGCGTAGCTAAGTG  56 1
        yqjA NONE
        yqjB 3416974 .. 3416985 +  -4.4  -4.16371   TCCGAATCATATCAC                TCAC TTTG GTGA                 TTTCATTGTTTAATG  64 51
        yqjC NONE
        yqjD 3417795 .. 3417807 +  -4.1  -2.57683   TGTTGGGCGTACTGC                TGACG CGT CGTTA                ATTATGGCGGACTCT  44 12
        yqjE NONE
        yqjK 3418522 .. 3418559 + -20.7  -4.45485   ATCTTTTCTTTTATA   GCATCGCGCCATCAGGT TATC ACCTGGTGGCGCGATAC    TTTTATGCATATCGT 100 42
        yqjF 3419159 .. 3419178 +  -6.4  -4.50976   TACTCAATTAAAAAA            GCGAGG GAATAGCG CCTCGC             TTTTGTCATCTGAAG  76 49
        yqjG 3420195 .. 3420212 + -12.7  -3.73647   CTTTGGCTAATTTCA             GGCGTCC TCCG GGACGCC              TTATTAATAAATACC 100 31
        yhaH 3420681 .. 3420695 + -12.8  -4.07568   ACGTTTTTCCTGATG               GCGGCG CGG CGCCGC               TTTTAAAGCGCCGCG 100 28
        yhaK NONE
        yhaL 3422691 .. 3422713 +    -9  -3.99374   CATCGGGCAACACGC           TGCCCCGACG TCA TGCCGGGGCG           TTATTATTAATGCGC  79 109
 STM474_3403 3435376 .. 3435389 +  -9.5   -4.3739   CTGTAAAAGCAAAAA               CCCGC CGAA GCGGG                TTTTATGAAGAGGTG  86 104
        garD 3440972 .. 3440989 +  -7.7  -4.46493   AAGCGCCTCGCAAAA             CATGGCT TAAG GGCCATG              TTTTCATATGTTTGA  82 52
        gatY NONE
 STM474_3411 NONE
 STM474_3412 NONE
 STM474_3413 3447352 .. 3447375 +   -16  -4.72272   CCTTCATTTGTTCCT          CCGTGCCCGC TCCG GCGGGTACGG           TTTTTCATGACAAAG 100 41
 STM474_3414 NONE
 STM474_3415 3449261 .. 3449279 +  -2.3  -3.80461   GAAACCATCCTTGAG             CCTGAGC AGTGC GTCCAGG             TTTGATAATAAATTG  51 2
 STM474_3416 NONE
 STM474_3417 3450977 .. 3451004 +    -4  -3.15427   CAAATCGCCTCTTAA        TTTTAGGGGAGC AATC GCTCCCCTCACC         TTCCTGGAGAATGTT  48 26
 STM474_3418 3452067 .. 3452095 +  -4.5  -4.06903   CAACTTTCCTGATGG        TACGAGCCAGC AACCTGC GCTGGCTCACA        TTTCCTTTCGAAATT  61 29
 STM474_3419 3453151 .. 3453163 +  -6.3  -3.96148   TACAGCGCATTTTTC                TTCAC GCC GTGAA                TTTCTGCTGCCAGCG  65 229
        yraM NONE
        yraN NONE
        yraO 3457021 .. 3457032 +  -4.4  -2.71731   CGATAACACGCTTTT                TCCT CACC AGGA                 TGATTAAGGAGTACA  47 7
        yraP NONE
        yhbO 3459340 .. 3459356 +  -2.1  -3.90744   CCCTCATGGTGTACG              CACCAGG TCA CCACGTG              TTGTTTCGCCAGCCA  52 390
        yhbQ 3459881 .. 3459891 +  -2.4  -2.87211   TGCGGCCAGTTCAAA                 ACCG AAG CGGC                 TATATAACGCCGGAT  40 153
        yhbU NONE
        yhbV 3462911 .. 3462938 +  -6.2  -4.42748   AATAGCGATCCCGTA        GGCCCGATAAGCG CAG CGCC-ATCGGGCA        TTGTTTTTGCCGTCA  73 76
        yhbW 3464053 .. 3464089 +  -7.3  -5.42259   TGGGCTGATTTTATA    ACGCCGATTTTCAAC GGTGATG GTTGGCAATCGGCGA    TTTTTTTCGAAGTAA 100 33
 STM474_3436 3465459 .. 3465483 + -11.5  -2.79684   GACTTGTGAAATATT          GCCGGATGA AAACAGC TCATCCGGC          TCGTTCAATTACTGG  77 53
        argG 3480993 .. 3481008 + -11.8  -5.29782   ATCGTTGATGCAACA              GGCCGC GAAA GCGGCC               TTTTTTGTGAATATC 100 47
        yhbY 3489283 .. 3489297 + -12.8  -5.13137   TCTCCGTTGATAAAA               GGCCGC TAT GCGGCC               TTTTTCCTTTCTTTA 100 118
        dacB NONE
 STM474_3460 3491985 .. 3492001 +  -7.9  -3.94933   ACCAGCGCGGTTTAG              CCGCCAG ATC CTGGCTG              TATTTTTCCAGTTCG  71 372
        ispB 3495713 .. 3495728 +  -6.1  -2.79023   TCGGTCTCGCACACA              TCGCG GTGCAG CGCGA               TCGTTAATGCCGTTC  53 3
         nlp 3496270 .. 3496292 +  -9.1  -3.63515   GTGCCTGTAAAACAA           CCCCCGC ATCGCGTTC GCGGGGG           TTGTTCAGCGTACAG  75 41
        yrbG NONE
        yrbH 3503342 .. 3503357 +  -4.6  -2.62616   TTACATATGCATGAT              CTCCTG CGTG CAGGCG               TCGTGTAGAAACTCA  46 2
        yrbI NONE
        lptc NONE
        yhbN NONE
        yhbG NONE
        rpoN NONE
        yhbH 3507598 .. 3507624 +   -13  -3.92522   TTAGCCAGTGCAGGA         CGGCCTGTTGTG TGA CACAACGGGCCA         TTTGTACAGTTAGCG 100 53
        ptsN NONE
        yhbJ NONE
        ptsO 3509566 .. 3509579 +  -2.5  -4.58283   TTTGTCCATACTAAA               TTTAT GTGA ATAAA                TTTTTCCAGGACTTG  63 243
        yrbL 3510398 .. 3510409 +  -7.2  -3.30124   CGCACATAGCCGGAA                GGCG CATT CGCC                 TTATAGCGAATCGGG  59 194
        gltB NONE
        gltD 3521835 .. 3521875 +   -11  -2.52519   GAAGTGTAACCCTTC CGGCTCCCC-GCTTACTGC CTTG GCTGATGGCTGGGGAGCCG  ATATTCCTCTCCTCA  74 32
        yhcG 3523178 .. 3523193 +  -3.2   -3.1811   TATCAAAAAAAATAT              CACACG AAAA CGTTTG               CTTTATTCTGGAAAC  46 65
        codB NONE
 STM474_3494 3526215 .. 3526226 +  -7.2  -3.96327   GCCCTGCAATTCATA                GCGC CCCG GCGC                 TTTCTCCTGCGGCCT  71 465
        yhcB 3536702 .. 3536720 + -11.7  -3.13082   GTTAAGAAATTTATC             GGGCGCA TCGCT TGCGCCC             TCTCTCTATCTTTCC  83 50
        degQ 3538214 .. 3538243 +  -7.9  -3.11192   TAATCCTGTCTTAAA       CCGGGCATCAGCCT GCG ATG-TGATGTCCGG       TTAACTCATGGTATG  62 38
        degS 3539580 .. 3539597 +    -7  -4.07568   GTTGCGCCTGTTGAC             GCGCAT ACTGCG ATGCGC              TTTTCCAGGCGACCA  70 241
        argR 3549925 .. 3549951 +   -13  -2.73099   GAGCTTTAGTCCCAC         TTCCTCCGTCGT CGT ACGGCGGAGGCA         CCTTTTTGTCCTCTC  85 32
        yhcN NONE
 STM474_3522 3550943 .. 3550961 + -13.1  -5.47914   CTAACCCGACGACTT             GCCCCCG CCTGC CGGGGGC             TTTTTTATGCTTTTT 100 52
        yhcS 3555715 .. 3555769 +  -8.1  -3.32844   GACATTGCCTGATGG C-G-CTGCGCTTATCAGGCCTG-GGCG GCACA CACCACAGGCCTGATAAG-GCGGACAG TTATGCGGTGCCGCC  65 93
 STM474_3536 3566472 .. 3566482 +  -6.8  -4.29845   CTACCAGACTTTGAA                 CCAG AAG CTGG                 TTTTCCGTTCGCTTC  74 219
        yhdH 3569463 .. 3569511 +  -7.6  -2.94099   TTACACATTGACACA CTCCCTGTCATATTCACTAC-ACG CCA TGTTGTGGTGGGTA-GACCGGGAG TCTGTGATGAAAAAG  59 83
        yedY NONE
        yedZ 3571260 .. 3571273 +  -4.5   -4.4078   ATGTGCGACTTTACA               TTGCC CAAC GGCGA                TTTTCGTTCGCAGAA  66 163
 STM474_3541 3571969 .. 3571996 +  -2.7  -3.09803   AATTTGACGAGCCAC        TGGTCGTCATCG AGTAA CGA-GGCGAACA        TGTTGGATAAAATTG  43 9
 STM474_3542 3573365 .. 3573381 + -10.8  -5.72622   ACGTTAATCTCAAAA              GGCCGG TGAAT CCGGCC              TTTTTTATTTCTGGG 100 45
        yhdT NONE
        panF NONE
        prmA 3576040 .. 3576059 + -11.4  -4.36914   AAATAATTCTTGTCA            GCGTGGTC GCCC GGCCACGC             TTTTCTCCACACAAC  93 35
        yhdG NONE
         fis 3578008 .. 3578033 +  -8.2    -5.252   CTGCTTGTTTAAAAA         GGCGCTACTC GGCATG GGGAAGCGCC          TTTTTTATACGCATC  91 55
        yhdJ NONE
        yhdU NONE
 STM474_3550 3581449 .. 3581465 +  -5.1  -3.89756   AACTCAAAATAATCT              CAGGC TTCTTCC GCCTG              TTGTTCATTTGGCAT  61 29
        acrE NONE
        acrF 3586819 .. 3586834 + -10.4  -4.58395   TAACCGGTAAACAGA              GGCGTC TTCG GACGCC               TTTTTAAACGGTACG  89 38
        yhdV 3587273 .. 3587289 + -15.1   -3.6959   AAATGATACATGCAG              GCGCGGC AAT GCCGCGC              TTTCAGTAATAATAT 100 35
 STM474_3563 NONE
        yrdA 3594525 .. 3594540 +  -4.7  -3.27476   CAACCGTGATCATCT              TCCTG CTGGGC CAGGA               TTAATGCTTCCGCCT  49 32
         def NONE
         fmt 3599907 .. 3599925 + -10.2  -5.54907   GGTCACGTCTTTATA             AGCCCGGT GTT ACCGGGCA             TTTTTATTTTATACA 100 42
         sun NONE
        trkA 3602636 .. 3602654 + -11.7  -4.90917   TTCCTCTAATTTAAG             GGGCGCT CATTC AGCGCCC             TTTTTAATTCCCTTT 100 32
        mscL 3603189 .. 3603240 + -14.6  -3.09933   ACCGTTCTTAATAAG CAG-AAGGCCAGTGGTAAAAAAGTG ATT CACTTTCTTGCCACTGGCCTCCCAG TTCCCTCGATTACCG  91 30
        hopD 3618854 .. 3618868 +  -4.3  -3.65415   GTTTTCTTTCCAGAC               GGTTA ATCGG TAACC               TTAATTTGTGATTGC  55 20
 STM474_3611 3621318 .. 3621333 +    -4   -4.1673   TCATGATCGGCTCAA              GCAGAA CTGG TTTTGC               TTTCTTAAAGCCTTC  60 273
        slyX 3627621 .. 3627635 +  -8.5  -5.60993   TTGAGACGAAAAAAA               GCGGG GTTAA CCCGC               TTTTTTTGTGCCCGA 100 37
        yheS 3633223 .. 3633242 +  -2.1   -4.6635   ATGCAGAACGACTAA            GAGCCTA TCCCAT TAGGCTA             TTTTATTCGCCATTT  64 26
 STM474_3627 3633765 .. 3633776 +  -5.8  -4.95896   AACAAGTAAATACCG                CCAG CTTG CTGG                 TTTTTCTCGCTTTCT  83 184
 STM474_3629 NONE
 STM474_3630 NONE
        prkB 3636580 .. 3636590 +  -2.4  -3.02144   TAATGTGCGTAAACA                 GGCG CGG CGCG                 TCTTCCCGGCGCTCG  42 285
         crp 3637772 .. 3637793 +    -8  -5.30616   TTAATTCCGTCAGAA           TGGCGCGT TTTATC ATGCGCCA            TTTTTGTTTGCATCG  91 37
        yhfK 3639965 .. 3639975 +  -8.2  -2.61216   CCTTCCCTACCGCCT                 GCGC AAA GCGC                 TGCATTCCTTCATGG  56 94
        tsga 3644742 .. 3644771 +  -7.7   -2.8805   ACGCATTGATAATCC       TTGCCGGATGGAG ACAT CGCCCTCCGGCAC        TCTATCCCCCCTCCT  61 32
        nirB NONE
        nirD 3647872 .. 3647892 + -12.5  -5.72118   GCGGTTAATTATTTT            TGGGAGGCG CAA CGCCTCCCC            TTTTTTGTATTTTTT 100 33
        nirC NONE
        cysG 3650335 .. 3650351 +  -9.4  -4.65933   ATTAATTAAAATAAC              GCCCTG TTATT CAGGGC              TTTATTTTACAACTA  91 36
        bigA 3656579 .. 3656597 +   -16  -4.62069   AACACTAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCAGATGCGCC 100 57
 STM474_3647 3657650 .. 3657664 + -11.4  -5.42862   GCAGATACAAAAAAA               CCGGGA TTT TCCCGG               TTTTTTTACAGGTCT 100 54
        mrcA 3670733 .. 3670746 +  -9.5  -5.66338   GTTCTGATCAAAAAA               GGCGC TCCG GCGCC                TTTTTTATTGTGTTT 100 34
        yrfF 3673846 .. 3673880 +  -9.2  -3.18274   TCATCTGATAGCGCC     GCCGTGCGACAGGGTA TGC TACCCTGTCGCGCAAA     TTGCGTTACCCTGGA  70 33
        yrfG NONE
        yrfH NONE
        hslO 3675926 .. 3675969 +  -8.3  -2.91593   TGCCTGATGGCGCTC G-CTTATCTGGCCTACAG CATCCCGCT CCGTAGGCCGGATAAGGC ATTTATGCCGCCATC  65 65
        pckA 3679753 .. 3679778 + -13.4   -3.4799   ATCCGGCGTTGAGAA         GAAAGGGAGG GTAATA CCTCCCTTTC          TTATGCCTCTTTTGT 100 74
        greB 3682567 .. 3682581 +  -3.4  -2.60032   GAAGAATCCTAAGCC               CCCGCT GAT GGCTGG               CATTTTTGCCAGCCA  42 46
 STM474_3671 3684985 .. 3685018 + -13.1  -4.14739   CGCTAATCGGGTAAT     ACGCAGGCCGGGTTA CTTC TTATCCGGCCTGCGA      TTTTGCAATACGTCC 100 35
        feoA 3685621 .. 3685633 +  -4.1  -3.14602   GGCGTTAATAGAAGT                GGAAG CGG TTTCC                TGTTAATACAGTGAG  48 7
        feoB NONE
 STM474_3674 3688231 .. 3688262 +  -6.6    -2.924   CTTGCGTTAACCTTC      GTCGGGTAGCGACGT AAC GCGTC-TTATCCGGC      CTTTATCCCGCGTTA  56 31
 STM474_3675 NONE
 STM474_3676 3689525 .. 3689540 +  -4.6  -4.07568   TGCGGCCATAACGTA              TCGAGC AAAG GCACGA               TTTTACGCGGCACCA  62 176
        yhgH NONE
        yhgI 3691554 .. 3691580 + -12.3  -2.57132   TTTCCCCGCATCCAT        GCCCGAT-GGCG CTTG CGCCTGTCGGGC         CTTGTCAGCCCCACC  81 44
        gntT 3693318 .. 3693349 + -20.4  -4.44667   TACGTGCTCTCAACA      TAATAAAGCCGGGG AAAT CCCCGGCTTTATTA       TTTCTTCTTCGCGGC 100 115
        malT 3701450 .. 3701467 +  -4.1  -3.21465   GCCCGTTTTACATCT             TTCTGGA ACTG TCCCGAA              TATTCAATTTCCCTT  47 348
        rtcR 3708112 .. 3708132 +  -2.6  -3.60971   GAGTTCACCGCCGGC            GAGGAT AATACGAAA ATCCTC            TTTCGCCATTAGCGT  47 364
        glpD 3711571 .. 3711588 + -12.7  -4.08767   TCGTAATAAAATCCG             GGGCGGT TTAT ACCGCCC              TTTTCGCCACATACC 100 35
 STM474_3697 NONE
 STM474_3698 3718315 .. 3718336 +  -9.3  -4.11692   GCTTAAATAATATCC           CTGGCGGGC TACG GCTCGCCTG            TTTTAAGGATCAATA  80 31
 STM474_3699 3719264 .. 3719293 +  -8.6  -5.27335   GGGACTTTAAGCGAT       GACGAAAGCGGGC TTCTT GCCCGCTAT-GTC       TTTTTATTTCAGCAC  95 31
        yhhY 3737535 .. 3737546 +  -4.4  -2.84126   ACCATCTGAATTTCA                TGGT TATT ACCA                 CTTTAAGCTTTATCA  45 132
        rbsK NONE
 STM474_3715 3739693 .. 3739712 + -10.8  -4.41548   AAAATAAAAAACAAT            GGAGTAAC GAAA GTTACTCC             TTTTATAAAATATAA  90 34
 STM474_3716 NONE
 STM474_3717 3741936 .. 3741947 +  -7.2  -4.37092   AACTTTAGCGTATCG                GGGC TGAA GCCC                 TTTTCTACCCGCAGT  77 221
        yhhA 3744139 .. 3744172 + -14.5  -2.72991   GCAGATACAATCCAC     GCCCCAGCGCAGCAGC TCT GCCGCC-CGCTGGGGC     TGATTGACGGTATAC  83 95
 STM474_3732 NONE
 STM474_3733 3755746 .. 3755777 + -10.8  -3.06796   GGCAAGTTATGAAAT      CCCCGGGAGCTTAC ATAA GTAAGTGACCGGGG       TTGAATAACGTAGCC  76 29
        rsmD NONE
        yhhL 3762812 .. 3762828 +  -6.5  -4.58283   TTTTGCTGTAACGGC              GCCGC CTCATTA GCGGC              TTTTTCCCGCCGTTG  78 312
        yhhN 3763701 .. 3763720 + -12.2  -2.95223   AATAATAGCGCTTGA            CTCTGGAG TCGA CTCCAGAG             TGTATCCTCCGGTTA  80 40
        zntA 3765976 .. 3765998 + -14.8  -3.30007   ACTAATCTTCTCCCG           CCCGGCGGCG TCG TGTCGCCGGG           TTATCCCGCGATATT 100 36
         tcp 3767821 .. 3767831 +  -6.8   -3.2048   TAATCAGAATAGTAT                 CTGC CGT GCAG                 TTAATGCGCTTTACG  59 38
        yhhQ NONE
 STM474_3747 3769560 .. 3769587 + -14.1  -5.40072   TTTACGACGATGATG        CGGCCTCCGGC AGTGCA GACGGAGGCCG         TTTTTTTAAGCGCCA 100 43
        yhhT 3771990 .. 3772005 +  -3.2  -2.82623   ATAGGCAACGTTGGT              CCTGAT ATGT ACCAGG               TCGTTCTGGGAAAAG  43 71
        acpT NONE
        nikR 3773162 .. 3773176 +  -2.8  -4.83615   GCAATAATGTTTACG               CCATTG TGC CAATCG               TTTTTCTGAAGCGTA  68 120
 STM474_3755 3778511 .. 3778523 +  -4.7  -3.09516   TAAAATAGAGACCCG                GCACG CGG CGCGC                TTCCATAGTCCGCGA  47 227
        pitA 3781424 .. 3781445 + -13.7   -5.8187   GCTTATCTAATACGA           GCGGGTCAG GAAA CTGGCCCGC            TTTTTTTATTCAGTG 100 134
        uspA 3782708 .. 3782725 + -10.5  -4.99043   GGCTATCAACAACAA             CGCCCGC TTAT GTGGGCG              TTTTGTTTATCCCCC  93 121
 STM474_3760 3784567 .. 3784605 +  -3.8  -3.53012   GACGATGGCGTTGGG  CGTCGCGA-CATCCGCC AGCGGC GGCGCATAATCGGGACG   TTTAACCACCACGCG  51 183
        yhiR NONE
         gor 3791447 .. 3791459 +  -2.6  -3.59979   CTGCCCTTTATCCAA                CGGT ACGAC GCCG                TTTCCGGTGCGGGAA  47 201
        treF 3798582 .. 3798603 +  -5.9  -5.60689   GAATCGCATCATAAA           TGGCTGA CTGAATTT TCAGCCA            TTTTTTATTGTCTGC  93 58
 STM474_3773 3801252 .. 3801266 +  -4.2  -4.64992   TATCCAGCATGACCA               GCGC ATCCGGC GCGC               TTTCTATTTTTTGCC  71 489
        yhjC 3802912 .. 3802930 +  -2.2  -3.06515   ACGGAAACCATTAAA             GAGGCCGC AGA GTAGCCGC             ATTTTCAGCATCCAC  42 11
        yhjD 3804038 .. 3804076 +  -5.3  -2.69151   GCTAGTCTGCGGCTT  GCTG-CCGAATGGC-ACGC ACG GCGTCGTCATTCGGCCTAC  TGATGTGTAGACCCA  48 36
        yhjE 3805705 .. 3805728 + -18.2  -2.66326   AGGCGTTGTAATAGG          GCGCCGGATG GCAT CATCCGGCGC           TACGTTTCACGTTAC 100 30
        kdgK 3809878 .. 3809903 +  -7.5  -2.92389   CGCTTACCGGGCCGA         CAGGCGGCA GCTTACTG TGCCGCCGG          TGTCTCCGTCACTTC  59 68
        yhjS NONE
        yhjT NONE
        yhjU 3829679 .. 3829721 + -12.7  -4.60797   TTGGGTTCAAGTTAG CCCCCGTCAGGTTGCCAGGT TTAT ACCAGTCAACGTG-CGGGGG TTTTCTCTATCCAGC 100 279
 STM474_3795 NONE
 STM474_3796 3830204 .. 3830238 +  -7.2  -4.07568   GCACTATAGCCTGGT     TATAGGCAGCATTCTT TAT GAGAGAGCTGCGTATA     TTTTGGGCAGGGGGC  72 90
        yhjV 3831661 .. 3831677 +  -4.3  -4.32034   TAAAACGCAATTAAC              TCAGCGG TTT CTGCGGA              TTTTCATCCTGATCG  66 131
 STM474_3805 3841706 .. 3841724 + -14.6  -4.03204   TCAGATACAAAAAAA             CCCTGCTC ATT GAGCAGGG             TTTCTGAATTTGGTC 100 156
         tag NONE
        yiac 3852146 .. 3852185 +  -2.9  -3.34716   CGCATAACCATAGCT GGCAATGCGCGCAGAATAG ATTT CGATTTTGC-CGC-TGGCC  GTTTTTAGCGGATGG  47 504
        yiaD 3854959 .. 3854981 +  -6.9  -4.54727   TAATAAGCCTGTTCC           GGTTGGCGC ATGCC GCGCTTACC           TTTTGATTTACGGAG  77 200
        yiaE 3855983 .. 3856023 +  -7.8  -2.79098   GGCGGGATAACGCTA CAG---GCCCGATAAGCGC TGGCTT GCGCTTATCGGGCAGACTG TCATTACTGGGTCGC  60 31
        yiaG 3857490 .. 3857508 + -10.3  -4.07687   CCTTTCTGTTTTTAA             CGGTCCT GCGTA AGGACCG             TTTTCCCCGCCCGAT  82 49
        cspA 3857992 .. 3858011 + -11.4  -6.09888   GCTCAGCATTTTGAA            TCCCTGCC TGAT GGCGGGGA             TTTTTTTTATTCCAA 100 50
 STM474_3822 3858844 .. 3858866 +    -7  -5.72622   GAGGCATCAGCGAAA           GAGTCCATTT AAT ACATGGGCTC           TTTTTTGTTTCTGGC 100 189
        yiaH 3865686 .. 3865703 +  -9.9  -3.22774   TTAGCTAAACGACAA             TGATGGC TCCG GCCATCA              TTCATCATCACTGTA  72 33
        xylR 3870981 .. 3871007 +  -2.4  -3.99374   GTATTGGTACAACGC        CCT-TTCGTGCA CTTCA TGC-CGAACAGG        TTATTGTTGCTACGC  54 360
        malS 3873982 .. 3873994 +  -3.3   -3.9398   CCGCCTGACCCCCAT                TTGCG CCC CGCCA                TTTGTAGCGTTATGG  55 133
        avtA 3875696 .. 3875714 +  -2.3   -3.3375   CGCGGCACAAAGTCC            GC-CGTCG TCAC CGCCGCGC             TATTCTGCTGTTCCT  45 423
        yiaK NONE
        yiaL 3878411 .. 3878421 +  -2.4   -4.4009   AATAGTCGTAAAAGT                 CGCC ATA GACG                 TTTTATAAAATAGAG  59 7
 STM474_3842 NONE
        yiaM 3879980 .. 3880009 +    -2  -2.92896   GATTCCTTTCAACAA       CCACAGCAAGGA GCCTAA TCATGGCCGTGG        TGATATTTCTCTGCT  41 8
        yiaN NONE
        yiaO NONE
        lyxK NONE
        sgbH NONE
        sgbU NONE
        sgbE 3886472 .. 3886488 +  -4.4  -4.48987   TCCAGGCCAGCGACA             CGCC-AG CGGC CTCGGCG              TTTTCATTCTGCCGG  68 521
 STM474_3851 3889185 .. 3889196 +  -7.2  -3.30124   AATACTGTGCCGGAT                GGCG GCTG CGCC                 TTATCCGGCCTACAA  63 39
 STM474_3853 3892078 .. 3892104 +    -8  -4.82901   CCAGAAAAATAAAAA         GCACATCTGG TTCATTT CCTGATGTGC         TTTTTATAAAGCAAC  86 226
        mtlA 3898635 .. 3898655 +    -9  -3.17075   AATATGAAGGCGATA            TCCTCTCC CTTGT GGAGAGGG            TTAGGTTGAGGGAAA  70 161
        mtlD NONE
        mtlR 3900830 .. 3900840 +  -5.4  -2.76263   CAAAAAGGATTTTAT                 TCTC AAC GAGA                 TAATTAAATAATGAG  50 400
        yibl 3901451 .. 3901461 +  -3.2  -4.59773   AGTTCATTTTTAACG                 GTAG TCC CTGC                 TTTTTCAGGATGAAA  66 149
 STM474_3862 NONE
 STM474_3863 3906957 .. 3906979 + -16.4  -4.30448   ACTCCCGACATCAAA           GGCAATGGCA TAA TGCCATTGCC           TTTTCACTTCCCTTT 100 53
        lldP 3908869 .. 3908880 +  -2.2  -2.86271   GCCTATGTTTTAACC                TGGA TGAT TCCG                 TGATTGTGATGCCAA  41 11
        lldR NONE
        lldD 3910847 .. 3910866 +  -4.8  -2.73268   GATGCCGCCTGAACG            CCTGGCGC GTGA GAGCCCGG             TAAATTTCTGCTATT  49 29
        yibK 3911543 .. 3911561 +  -5.9  -2.88579   CCAACAGCGTAGCGG             CGCGCTG GCCAA TGGCGCG             TCTGTCAACGCTTAC  51 188
 STM474_3870 3913975 .. 3913993 + -11.7   -3.1352   GCCCTTAACCCGACT             GGCGGGA ATCCG TCCCGCC             TCTCTTACCTTACAG  83 33
        pmgI NONE
        yibP NONE
        yigQ 3922752 .. 3922770 +  -4.5  -3.57144   GCCGGAAGGACCAGA             GCAGCGT CTGAT AAGCTGC             TTTCGCGCTGCGGAC  52 95
        rfaD NONE
        rfaF NONE
        rfaC NONE
        rfaL 3930825 .. 3930854 + -14.4  -4.21194   AAATAGATAAAAAAA       CGCGCTGATACT TATTAC GGTATCAGCGCG        TTTTCCATCATCAGG 100 31
        kdtA NONE
        coaD 3942430 .. 3942443 +  -4.5  -4.48987   ATAAGTTTCCTACCT               TGCCG GGCC TGGCA                TTTTACTTCTGACAG  69 37
         dfp NONE
         dut 3946525 .. 3946545 +    -9  -3.33492   AACGTCATAATACTG            CCGCAAGC GCTGA GTTTGCGG            TTATAGCGTGGGTGC  71 58
        slmA 3947342 .. 3947358 +  -2.2  -3.36991   TATCAGGTTTTTCTT              CCAGAT AGGCA ATCAGG              TCTTTCAGCGTAATG  45 171
 STM474_3908 NONE
        yicc 3949718 .. 3949747 +   -10  -3.93695   TGGCGCTCAATATGT       CAC-AGAGCCCGC CTTAT GCGGGCTCTCGCG       TTTATCGGTAGTACG  82 44
 STM474_3911 3951623 .. 3951641 +  -8.8  -4.27465   GAAATAACTCACCGG             CGGCGC GTCCAGG GCGCCG             TTCTTTTAAATTATC  80 42
        yigC 3952493 .. 3952520 +  -9.2   -2.8978   CCAAATCCGGGAATA        TGCTGAGCAG CCAGCCAT CTGCTCAGCG         CTTTGATCTGCAGAT  67 44
         gmk 3955033 .. 3955048 +  -3.3  -2.78816   CAAATTGTTGGCAGA              CTGAA CCCACT TTCAG               TATCATGCCCAGTCA  43 22
        rpoZ 3955373 .. 3955383 +  -2.4  -2.83082   CGTCGTTAATCACAA                 AGCG GGT CGCC                 CTTGTATCTGTTTGA  40 32
        spoT NONE
        spoU NONE
        recG 3960423 .. 3960443 +  -7.5  -3.06133   CCGCCTTCTGCACCC            CGTCGAGGA TCA TCTCCGACG            TTAACTGCCGGGTTA  57 171
        yicE 3963969 .. 3963988 + -10.7  -2.63479   CGTAAAAACCCTGCG            GCGGCGA CACGAT TCGCCGC             TGCTGTAACGCTCTT  74 36
        yicH 3966186 .. 3966208 +  -4.8  -3.17146   TAATCGGGCTTCTGG           CTATTGTTGC CCA GCGCCAGTAG           TGTATTGTCACGCAC  49 423
 STM474_3926 NONE
        rhuM 3974221 .. 3974238 +  -5.5   -4.3739   TGTGATTGCATGATA             CCGTCGT GAAT ATGGCGG              TTTTATCCAGGCGTA  70 161
        rmbA NONE
        misL 3978960 .. 3978978 + -14.6  -4.07568   TCAGGTAACAACAGA             GCCGCTGA TCT TCAGCGGC             TTTTACCCGGAAACG 100 42
 STM474_3934 3981084 .. 3981095 +  -5.8  -3.25088   GCTTAAAAACGGAAA                TCGC CCCG GCGA                 TTAATGACTTTAACA  54 10
        slsA 3981857 .. 3981877 + -14.1  -4.43911   CCTGAAGAGGCTAAA            TAGCCCCAT TTA ATGGGGCTA            TTTTACTTGCCATTT 100 48
 STM474_3939 3988364 .. 3988391 +  -9.2  -2.71763   TGCTTTTGTACCAGT        TCCAGCATCG-CG ATA CGTCGATGCTGCA        TAATCTCGTTATCCG  60 480
 STM474_3948 3997205 .. 3997219 +    -2  -3.21395   TGTAACCGGTTTCTG               TTCGCT AAA AGCGCG               TATTCTGGAGCGAAT  44 78
 STM474_3949 3999036 .. 3999049 +  -3.7   -4.0896   AGTAGCAGCGGCGCA               CCGGC CAGC GCCAG                TTTTACCGAACGTTT  59 421
 STM474_3951 NONE
 STM474_3952 4001100 .. 4001119 +  -2.2  -5.01497   CGCGCATGAAGCCCC            GTAC-TGTT CAT AACGCGTAC            TTTTTGTCTAATCAT  74 351
 STM474_3968 4017351 .. 4017367 +  -2.2  -3.54158   ATGATAGCCTGCAAC              GCCG CCTGCGGAT CGGC              TTCGTTATTCAAATC  47 442
 STM474_3972 4020834 .. 4020853 +  -7.8  -4.92385   AGACGTAACACATTC            TCGGCAAC ATTT GTTGCCGC             TTTTGTTTACATATC  87 59
        emrD 4022197 .. 4022217 + -16.1  -3.66178   GTTTAACGTTTCCCT            CGCCCGGCG TTT TGCCGGGCG            TTTCACATTCCGGCG 100 35
        dsdX NONE
        dsdA 4027113 .. 4027153 +    -9  -3.30771   CAGTGCCGGAAAGAC G-GCAGCGCCATCCGGC ACGCCATC GCCTGATGGCGCTACGC  TTATCAGGCCTGTGA  71 49
        yidQ 4032296 .. 4032325 + -10.7   -3.6707   CCTGATTTATCGCCC       GGTTTCCGTCACC CATA GCTGACGGAACCC        TTTCACCTCTTCCAT  83 36
        torR 4047047 .. 4047081 +   -10  -3.15663   AGTTTCGCTGCACTT     CAATGTCGTTATCGCC CCA GGCGATATCCACAATG     TTGATGGCGCTGCCT  67 399
        torS 4050870 .. 4050901 +  -3.6  -5.03747   AAACCGCAAATAATC      GGCGTTTTGC-GCGC CAC GCCCAGCGAGAAGCC      TTTTTTCACCAGTTT  77 394
 STM474_4010 NONE
 STM474_4011 4059145 .. 4059173 + -11.7  -2.54801   CCGTAAAATAAGCCA        ACTGTCTGCCTGC GCC GCAGGCAGACACC        CTGTATTTGCGAGTC  79 30
 STM474_4012 4060457 .. 4060473 +    -8  -2.75992   GCTGGCGACGCTCGC              CGCGTT CGATA AACGCG              TCCTCTTCAATCAGA  57 331
        rpmH 4067116 .. 4067129 +  -2.3  -3.58343   TCGTGCTAAAGGCCG               CGCTC GTCT GACCG                TTTCCAAGTAATAAA  49 1
        rnpA NONE
        yidd NONE
 STM474_4020 4069479 .. 4069496 + -12.7   -5.7946   GGCCTACAATCAAAA             GGCGGTC ATAT GACCGCC              TTTTTTTATTGCAAC 100 118
        trmE 4070928 .. 4070954 + -10.9  -5.00138   GTGAACGTTCACTAA         CCCGCATTAAC TGCCT GTTAACGCGGG         TTTTTACTTTCCATA 100 61
         int 4072546 .. 4072587 + -26.3  -3.87075   GGGTTGCGCTAGAAA GTTTTCTACCGATCCTAGA AGTC TCTAGGATCGGTAGAAAAC  TTTCTAGCGCCTCCT 100 206
 STM474_4024 NONE
 STM474_4025 4074881 .. 4074910 +  -8.5  -2.80195   ACGCTGTAGATAAGT       CGGACGGCATTGCC GAA GGCTTT-CCGTCCG       TACTTCCTGCTGAAT  64 319
        yidY NONE
        yidZ NONE
        yieE NONE
        yieF 4079014 .. 4079036 + -14.8  -3.57418   TAAGTTCGTTAAAAA           CCCTCCCCCC GAT GGGGCGAGGG           TTCATTTCATCAGTG 100 38
        yieH 4081656 .. 4081689 +  -3.8  -3.85817   GGCCCAGTGACTCCA     GACTCACCAGCAGCG GCTGA TGCTGCTGG-GAGAA     TTTCTCCAGCGCGGT  56 464
 STM474_4039 4090305 .. 4090322 + -12.7  -3.38272   CAGCGCACAAAAAAA             GGCCGTC TGTC GACGGCC              TTCTGCCTGGTACTA  90 134
        asnA 4108037 .. 4108058 +  -5.7  -2.76263   GCGCATCAACGCCAG           GCAGAACGC TTTT GCGCACTGC            TCGTTAAATCCTCCC  50 450
        trkD 4112791 .. 4112801 +  -2.4  -3.17075   CTCCCATCAACATGC                 CGGG GGC CGCG                 TTGGCTTACCCGGCC  44 42
        rbsD NONE
        rbsA NONE
        rbsC NONE
        rbsB 4116878 .. 4116901 +  -9.5  -2.75844   AAGAAAAGCAGGGCA          CGCGCCACC CTAACC GGTGGCGCA           CTTTGACGTGGAACC  69 114
        rbsK NONE
        rbsR 4119074 .. 4119087 +  -4.5   -3.4252   CCGCCAGAACGCTGT               TGCCG CTGC TGGCA                TTATCGTCCGTCAGA  54 245
        yifE 4128391 .. 4128403 +  -6.9  -5.40072   GATGATTAATAAAAA                GGGCG TAA TGCCC                TTTTTTTACGCCAAC  91 32
        ilvL 4130404 .. 4130427 + -13.8  -5.78622   CTTAACGAACTAAGA          CCCCCGCACC GAAA GGTCCGGGGG           TTTTTTTTGGCCTGA 100 50
        ilvG NONE
        ilvM NONE
        ilvE 4133386 .. 4133400 +  -4.4  -2.78679   AATAAATAAAATTAA               TATTTT CCC AAAATA               ATTTGCGTCACAGGA  47 39
        ilvD 4135378 .. 4135402 +  -3.7  -2.91264   AAATCGAAATTGGGA         GGTTGATGAT GGCGGA ATC-TCAACC          TCTGTCAGTCGCGCC  46 20
        ilvA 4136950 .. 4136971 +  -8.7  -2.63479   GCGTTTAGTTTTTCG           GGCCCAC AAAGTAAA GTGGGCC            TGATATCCAGATATT  63 45
 STM474_4084 NONE
 STM474_4085 4137907 .. 4137923 +  -9.4  -5.40072   AGAACGCATCAATTA              GCGGCT CATGC AGCCGC              TTTTTTTGCGCGCAG 100 63
        ilvC 4140459 .. 4140486 +  -9.9  -5.28942   AAGCAGACGATGTAG       GCCGGGTAAGGCG TAGC CGCC--ACCCGGC        TTTTTATTTACGATA 100 86
 STM474_4089 NONE
         rep 4143593 .. 4143607 +  -2.7  -4.30576   AGCTGTTCCGCAACA               CGGGG CGGTA CCGCG               TTTTGCTGATGAAGC  62 285
        trxA 4146721 .. 4146771 + -10.6  -2.74563   GCGTAATACCTTTTA TACGTCGAATGACAAAGGCGCTG TATGGT CAG-GCGTCTGTCATTCGACGAA TGATTAAGGTATCAG  74 35
         rho 4148403 .. 4148434 + -14.6  -4.20696   AACCTGGTCTTTACC      TGAAAACGCCACGT TTTT ACGTGGCGTTTTTG       TTTTGCGATTCATCC 100 39
         rfe NONE
        wzzE 4150792 .. 4150815 + -12.5  -3.06696   TTAGCAACACCTCTG          CAGTAGGGG GCTGGG CCCCTACTG           TCTATTCGAAGAGAA  83 37
        wecB NONE
        wecC NONE
        rffG NONE
        rffH NONE
        wecD NONE
        wecE NONE
        wzxE NONE
 STM474_4105 NONE
        wzyE NONE
        wecG 4160846 .. 4160860 +  -4.3   -2.6704   TCTTACACAATAAGT               GCATT TTTTT AATGC               TCCATTTGCCATTTG  46 112
        yifK 4162611 .. 4162627 +  -5.1  -3.44319   TCAGTTGGTAGAGCC              CTGGATT GTG ATTCCAG              TTGTCGTGGGTTCGA  56 285
        cyaA 4170437 .. 4170449 +  -2.7  -4.75372   ATCATGACGCGCCGC                TATTG CAG CAGTA                TTTTTCGTAAGTGCT  68 3
 STM474_4118 4170913 .. 4170926 +  -9.5  -3.30243   ACTGTGCCGGATGGC               GGCGC TAAC GCGCC                TTATCCAGCCTACAT  74 18
 STM474_4119 NONE
 STM474_4120 NONE
        yifL 4173750 .. 4173760 +  -2.4  -2.56715   CGCAACGGGAGATGG                 CCCG TCC CAGG                 TCAATTACTGAGGAT  39 4
        dapF NONE
        yigA NONE
        xerC NONE
        yigB 4177041 .. 4177052 +  -7.2   -5.1166   CCCCGGTAAGCGAAG                CGCC ACCG GGCG                 TTTTTAGTTTTCATG  86 115
        uvrD 4179595 .. 4179608 +  -4.5  -4.42765   GCTGATAGCCTTAGC               GGTTG TCAG CGACC                TTTCATTTTTTCCCG  66 371
        corA 4180732 .. 4180743 +  -4.4  -3.73294   AAGTTACAGGCTCCA                GGTA TTGA TACC                 TTTAACCTCTTTTTC  58 86
        pldA 4184073 .. 4184094 + -12.3  -4.63479   TTGCAGTTTCTCTCG           CAGGCGCTG AAAA TAGCGCCTG            TTTTGATTTATGGTG 100 60
        recQ NONE
        rhtC 4187014 .. 4187024 +  -2.4  -2.50816   CAGATCGATAGCGCC                 TGCG GCG CGCC                 ATTGCTGGATACCCA  38 404
        pldB 4188403 .. 4188413 +  -4.6  -3.91798   AGCCTAATTTATCCA                 GCGG AAA TCGC                 TTTGCTTAGAGGTTA  59 6
        yigL 4189254 .. 4189270 +  -6.6  -3.12999   TGTGATTGTTTGTTA              GTTGAC CAGTT GTCAAC              TTCACTCTCCGCTAC  58 41
        yigM 4190520 .. 4190530 +  -3.2  -4.25104   GGCTAAATCTTCCGG                 CGTA ATC TGCG                 TTTTGCTGGCCAGCG  62 327
        metE 4193598 .. 4193645 +  -9.2  -2.71011   CCGCTGCGTTTATCC GG-CAGCAATGCGGCGCTACCC TTTGAC GGGTAGCGCC-CGTGCCTGACC TGATTAACAGCGCCT  66 51
 STM474_4144 4193898 .. 4193914 +  -9.4  -2.72471   CTGTTATGTTCCCTG              GCGACG ATAAA CGTCGC              ATTGTCTCATGGCGC  69 159
 STM474_4145 4195332 .. 4195343 +  -2.2  -3.60316   CAAACATCGTAATGC                GCTG TGGT TAGC                 CTTTTTTCCCACCGT  49 98
         udp 4197191 .. 4197207 +  -9.4   -5.2853   CCTCTCTTTTGCAAA              GGCCGA CGCGT TCGGCC              TTTTCTTTTTGCGTG 100 45
        yigN 4198774 .. 4198791 +  -2.6  -3.11727   AGTCCTGGCGCAGAG             TAGGGC AAATTG GCCCAA              TCTGTTACACTTCTT  43 58
        ubiE NONE
        yigP NONE
        ubiB 4201926 .. 4201936 +  -2.4   -2.8937   GCCGCAAGTCAATGT                 CGTC CCG GTCG                 TATGTAAAAGTATGT  41 107
        tatA NONE
        tatB NONE
        tatC 4203642 .. 4203663 + -15.9  -2.62184   ACTGAAGACTAAACA           CAACCGCCC GCCA GGGCGGTTG            TCATATGGGGGCAAG 100 29
        tatD 4204826 .. 4204846 +  -3.2  -5.02074   GCGGTTCGCTGACGG            AGGTACGT TTTCC GCGTACCA            TTTTTTCCAGGGTGA  76 389
        yigC 4206636 .. 4206677 +  -4.6  -3.01712   AACTGAAAGCGGACA TCGACA-T-TTCAGGCTGCG GCGA CTCAGCTTGAAAAATGTCGG TATTGACCCGACACC  49 39
         fre 4207419 .. 4207436 + -12.7  -4.74504   ATTTAACTATTTTAT             GGGACGC AGTA GCGTCCC              TTTTTACGTTAGCCT 100 35
 STM474_4159 4209593 .. 4209626 + -21.1  -3.09933   TGGCTGCCTTTGCTC     ACCCCGGGCACATAG TTAT CTATGTGCCCGGGGA      TTCGCTCAGTTGCCG 100 132
 STM474_4162 NONE
        yigz NONE
        trkH NONE
        hemG 4217683 .. 4217694 +  -5.8  -3.05816   GAACGGTAACAGGAA                GCAG CTTG CTGC                 TTCGCTGACGAGTGG  52 481
 STM474_4174 4224534 .. 4224544 +  -8.2  -3.62597   AACGGCGCTTTTACG                 CGCC CGC GGCG                 TTATTAAAGAGTAAA  69 1
        yihE NONE
        dsbA 4226268 .. 4226286 +   -16  -4.87273   AAAAAATAAAAAGAA             CGCCGGTC ACT GACCGGCG             TTTTTATAAGATGTT 100 32
        yjcD 4230581 .. 4230607 + -18.1  -5.55769   GCTGAATATTTTAGC         CGCCCCAGTCA GTTTA TGACTGGGGCG         TTTTTTATTGTGCGC 100 250
 STM474_4180 4231793 .. 4231846 + -19.9  -3.99405   AACCCGTTAAGGGTC GTGAGTCAAGAAAAAAGGCGGCAGA TTAC TCTGTCGCCTTTTTTCTTTGCTTGC TTTCTGCTAGATTCC 100 31
 STM474_4181 4232454 .. 4232472 +  -6.1   -3.3636   CTTGCCCGTCCTGCT             TATAACC CTTCC GGTTATA             TGTTATCTGGTGTGG  59 58
        hemN 4234285 .. 4234311 +  -2.2  -4.66833   TTAATCTTTACACTC         GCGGGTAATG TTTACTC CATTCCCAGC         TTTTTCAACTTCCGC  64 327
        typA 4240669 .. 4240695 +  -8.7  -5.80364   TCTTACGGATAAAAA         CCCTGCCGA AATGAAAGC TCGGCGGGG         TTTTTTTATTCACGT 100 48
        yihV NONE
        yihW 4258061 .. 4258087 +    -8   -4.3821   AAAACGGCGCTGTGA         TGCAGGCGATAT TGA ACATCGTCTGCG         TTTCTATTGTCTTTT  79 89
        yihX NONE
         rbn NONE
        yihZ NONE
        yiiD 4261267 .. 4261278 +  -7.2  -4.39828   TTCGCAATACTGAAA                CGCC AGGG GGCG                 TTTTCTCCAGGTGTT  79 219
 STM474_4211 NONE
 STM474_4212 4263957 .. 4263969 +  -3.3  -4.07568   AGTCGCGGCTCTGTT                CGCAG TTA CTGCA                TTTTACGCGCACGAC  58 305
        fdhD 4270458 .. 4270472 + -12.8  -3.65542   CTTCGAACGAAAAAA               GCGCCC CTG GGGCGC               TCTTTTGGCAGTCGC  95 205
        yiiG 4272931 .. 4272945 +  -8.5  -5.31059   TAACGCCAATAAAAA               GCGCC GATCA GGCGC               TTTTTTCGTTCATGT  95 96
 STM474_4222 4274858 .. 4274872 +  -8.5  -3.28712   TTGAAATTGCCGGAT               GGCGG CGTAA CCGCC               TTATCCGGCCGACAA  69 37
        rhaS 4281403 .. 4281414 +  -7.2  -3.06796   CCTTTAATACCGGAT                GGCG GCTG CGCC                 TTACCTGGCCTACGG  60 88
        rhaR 4282762 .. 4282772 +  -2.4  -3.19656   GGGTCAACGCCAAGC                 GCGG CAG CAGC                 TTCATGCATCGGTTT  43 446
 STM474_4231 4283731 .. 4283742 +    -3  -3.76775   ATTTGGTTGTTTTAT                TTGT ATTT ACAA                 TTTAAATATATTGAA  52 101
 STM474_4232 4283975 .. 4283991 +  -5.3  -2.67713   GACATGAAACAACGT              TTTAATT TTA AATTAAA              TGGATTCTGTTATGA  48 34
 STM474_4233 4284707 .. 4284729 + -14.2  -5.82316   TATTTATTCCCTTTT           CCGGCTACTT TAT AGGTAGCCGG           TTTTTTTTACCTGGT 100 58
        sodA NONE
        yiiM NONE
 STM474_4239 4289785 .. 4289810 + -13.3  -3.44381   GACGGCGAGATAAAA         AATCGGCCTGC ATTC GCAGGCCGATG          GTTTTTAGGTTCGCT 100 46
        cpxP 4292574 .. 4292592 + -14.6  -6.02914   CACCATCCCTGTCTT             CCCCCACA TGA TGTGGGGG             TTTTTTTTATCTCCA 100 65
        fieF 4293676 .. 4293690 +  -2.9  -3.39432   GCAGGAAGGGATTGT               TATAC TATCT GTATA               TTCGTTGGATCGTTT  46 117
        pfkA NONE
         sbp 4295937 .. 4295961 + -15.1  -5.63517   TAAACCGTTTATAAA          CCCGGTAACGT ATT ATGTTACCGGG          TTTTTTCTTTGCCAC 100 38
        ushB 4296816 .. 4296844 + -16.9  -2.72799   CATTATCTTATTGAT        TCTTATCCCGGTT TAA AACCGGGGTAAGA        TCGTGTCTATAAAAA 100 61
 STM474_4247 NONE
 STM474_4248 NONE
 STM474_4249 NONE
 STM474_4250 4301210 .. 4301223 +  -2.3  -3.66999   ATCCTGCGATAACCC               CACCA TATC TGGCG                TTTACCTGCCTGACT  49 53
 STM474_4251 4301443 .. 4301482 +  -2.7   -4.4891   GGGCGGGGATGCTGT  GATGTATCGCGCTGGCG GTGATA CGCCAAAGCGATGGCTC   TTTTGTCCTGCTGGC  63 24
 STM474_4252 4301745 .. 4301755 +  -3.2  -3.90729   GATTTAATAAACACG                 CCTT TCC AGGG                 TTTATCGCCGTTATT  54 179
         ego NONE
        ydeY NONE
        ydeZ NONE
        yneA NONE
        yneB 4310474 .. 4310513 +  -2.8  -3.86571   AAGTTAAATGAGATC  G-CTTCCCCATCTTTTACC GAT GCGAGGAGATGGGGATGAC  TGTTATTTTATTTGG  54 34
        lsrg NONE
 STM474_4262 4311717 .. 4311730 +  -8.1  -3.57144   AATTAAGCCTGTTTA               GCAGC TTCT GCTGC                TTTCACGATCACCGC  69 130
        yiiR 4313837 .. 4313863 +  -6.5  -3.83409   GTAATGTTCAGCCGT         CATATGCCCCG GTCGG CGGCGCAGATG         TTTAGTCATCTGTCG  64 153
        yiiU 4318991 .. 4319006 + -11.8   -5.1675   ACAACGCATAAAAAA              GGCGCC TTAC GGCGCC               TTTTTTGATCACTCG 100 223
        rpmE 4327426 .. 4327455 + -12.3  -4.38712   ATAAGTTACCGCCAG       AAAAAAAAGCGCC GCAG GGCGCTTTTTTTG        TTTTCTAGGGATAAC 100 37
 STM474_4282 4330535 .. 4330559 +  -6.3  -3.00138   GAATCGTTAAAAAAG          CGCGGCCAGAG GCG TTCTGACCGCA          TGCTTTGCTATCAGT  56 401
        metB NONE
        metL 4334770 .. 4334783 +  -5.2  -3.08464   AAGTTCGTGAGCGAA               GCGC CGGGTT GCGC                TTCGCTCCCTCATCA  51 48
 STM474_4289 4339812 .. 4339844 +  -4.9  -3.95036   TGTCGCGGCGTGACA      TGAAGAAAATTCAAC TTT GCTGAATATTCCTCA      TTCTTTGGCGTGATT  61 65
        metF 4340864 .. 4340879 + -10.4   -4.1711   GGTTTATAACCTCCA              GCTCCC TGCC GGGAGC               TTTATTACAACTCAT  85 32
        katG 4343218 .. 4343249 + -15.2  -4.39989   TCTGACAGGTTAATT      CGTCAGCGGCTGCT ATTC GGTAGTCGCTGACG       TTTTCCTCGTTTAAT 100 41
        frwC NONE
        frwB 4350177 .. 4350210 + -10.3  -2.91593   ATGCCCGATGGCGCA     AGTTTATCGGGCCTG CTCA CAGGCCCGATAAGAG      ATTTATGCCGCCATC  72 48
        pflD NONE
        pflC 4353379 .. 4353389 +  -2.4  -2.55668   AGCAGGATTTCAGGT                 CACC ACA GGAG                 GTTAATATGGCAGTA  39 10
        frwD 4354238 .. 4354254 +  -7.9  -3.79021   CCGATACGCGGGCCG              CGGCGCG CAA CGTGCTG              TTTCGTGAGGTTTTG  68 514
        argC NONE
        argB 4362758 .. 4362769 +  -3.6   -3.3095   ATTTGTTCGCCCGAT                GGCG GCTG CGTC                 TTATCGGGCCTATGT  48 43
        argH 4364268 .. 4364293 +  -5.9  -5.40072   CATCAGGCAATACTG         CCCGGCCGAGC ATCA GCGACGCCGGG          TTTTTTTACGCAAAA  87 59
        oxyR 4365732 .. 4365753 +  -5.9   -3.5627   GCCGTTAACTGCTGC           TCGGTTTTG CCGA CAGAACTGA            TTTCCGGAATGGTAT  57 321
        yijC NONE
        yijD 4368034 .. 4368071 + -11.3  -3.16336   CGCGGAATAGTGTGC   GAATGCCGGATGG-CGGT ATA ACCGGCCATCCGACGTAC   ATTTTACCTTGCGGT  81 31
        btuB NONE
        murI 4372647 .. 4372658 +  -5.8  -3.05816   GAACGGTAACAGGAA                GCAG CTTG CTGC                 TTCGCTGACGAGTGG  52 483
        murB NONE
        birA 4379999 .. 4380016 + -11.3  -5.57729   CCGAATAGTAAAAAG             GGGGAGT CGGT ACTCCCC              TTTTTTCTGTTATTT 100 33
         tuf 4383154 .. 4383171 + -11.3  -4.60924   CAATGCGCAATAAAA             GGGCATC ATTT GATGCCC              TTTTTGCACGCTTTC 100 60
        secE NONE
        nusG 4384319 .. 4384347 + -17.6  -5.35224   CTAATCGTTGCATAG        GGCGCGAAATTG ACATA CAATTTCGCGCC        TTTTGTTTTTATGGG 100 65
        rplK NONE
        rplA 4385586 .. 4385622 +  -6.6  -2.80513   TAAGATTAGTCTTTA   CGTGGGCGGTGATTTTG TCTA CAATCTTACC-CCCACG    ATTCTGTTGAAATAT  55 38
        rplJ 4386483 .. 4386496 +  -8.1  -3.89695   GCGATGCAAAAGAAG               CTGCG TAAT CGCAG                TTGTCTTTATCAAGC  72 18
        rplL 4386962 .. 4386987 + -17.7  -4.64766   AGAAATCAGGCTGAT         GGCTGGTGACT TTTT AGTCACCAGCC          TTTTTGCGCTGTAAG 100 65
        rpoB 4391287 .. 4391316 + -13.6   -3.4252   TCGCTCAAACAGGTC       ACTGGTGTCGGG GTAAAA CCCGACACCAGA        TTGTGCTAACTCCGA 100 44
        rpoC 4395576 .. 4395605 + -12.9  -2.53164   ACGAGTAATCGTTAA       ATGGTGGAGGGGT ATTT ATCCCTCCACCAG        CTTCATGCTGGATAC  84 33
 STM474_4340 4396300 .. 4396324 +  -2.3   -3.6796   GATTCCAAATGTGAC          TTTAAATTTAT CCC ATAAATCTAAG          TTATTAAAGTCTATT  50 392
 STM474_4343 4397882 .. 4397898 +  -2.3  -4.99043   CTTAAATAATTTAAT              TGGTTAT TAA ATAACAA              TTTTATTTATACAGA  69 215
 STM474_4344 4398278 .. 4398301 +  -8.8  -4.67234   GACAAAATAAAAAAA          CGGGAGGTCG ATAA CAATCTCCCG           TTTTTCGCATTACGT  89 100
        nudC NONE
        hemE NONE
         nfi NONE
        yjaG NONE
        hupA NONE
        yjaH 4409314 .. 4409324 +  -8.2  -2.65993   GGATATCAGTTGCTG                 GCGC AGC GCGC                 TGGTCTGCGTATAGT  59 322
        zraS NONE
        zraR 4412805 .. 4412815 +  -2.4   -4.4648   TGAAGCGCGTTCGTC                 CCAC TCG GAGG                 TTTTCTCATCCAGCT  62 334
 STM474_4369 4421652 .. 4421693 +  -2.5  -3.01924   GCTTGTGTATTTTGC T-CGTTAACATTGGTTGTC AATCCC GGCG-CCAGTGTTAACGCA TGTTCAACCAGAATC  42 131
        metA 4423106 .. 4423121 + -10.4  -5.63517   CAGCATGTTGAATCA              GGCACC TTCG GGTGCC               TTTTTTATTTCCGAA 100 71
        aceB NONE
        aceA NONE
 STM474_4374 NONE
        aceK 4428617 .. 4428633 +  -6.5  -3.17527   CGGAAATAGAGAGGG              CCGCAAA CGG TTCGCGG              TGTTCGTCATAAATA  56 523
        metH 4433345 .. 4433367 + -14.2   -3.4214   TTTCCTTACAACATA           CAAGGCACTC ATT GGGTGCCTTG           TCTCTTTCTTACAAT 100 58
        yjbB 4435217 .. 4435268 + -16.8  -3.12999   GAGTATTAAGTGAAA TGCCGGATGGCGGGGCCTACG GAGAACATGCG CGTAGGCC-CGTCATTCGGCA TTCAATATGGCCTGG 100 32
 STM474_4381 4436128 .. 4436143 +  -3.2  -2.78463   TGCCATCTGGTATCG              CCTGAA AAAT TACAGG               TATAATCCGCAAAAT  43 5
 STM474_4382 NONE
        yjbC 4438028 .. 4438046 +    -6  -3.53224   CCTTTGCCGTTTCGC             CCGATTTT TCA ACAATCGG             TTTCCCGGACCAGTA  60 415
 STM474_4386 4439530 .. 4439541 +  -4.4  -4.77157   CTTATGGCATTGATT                TCCT TTTC AGGA                 TTTTTCATAAATTCA  74 336
 STM474_4395 4445884 .. 4445929 +  -3.9  -3.90112   CCCGTTAGCTGCTCC CGGCTGATAATAGCGAAATCC CCGC GGGTGTTGCTATAAGCCGTCG TTTCATTGGAAAGGC  56 154
 STM474_4413 4459702 .. 4459719 +  -4.7  -3.10796   CGGATAAGGCGCCTG             CGTCGCC ATCC GGCAGCG              TATTGCCTGATAGCG  49 100
         pgi 4463203 .. 4463220 +    -7    -5.626   TAAGATAATAAAAAG             GCCGAT ATTCAC ATCGGC              TTTTTTTATAAGATA 100 125
 STM474_4416 4463808 .. 4463829 + -11.7  -4.13014   CGGTACGTTTAACCA           TAACCACAC TCCG GTGTGGTTA            TTTTGCCCCTCTGGA  93 44
        yjbF NONE
        yjbg NONE
        yjbH 4467410 .. 4467424 +  -2.1  -3.28924   AAAAATATAGATGCC              CGTCAC ATTT GTG-CG               TTATACAGAAACCTC  45 114
        yjbA 4468006 .. 4468025 +  -5.6  -2.75183   CTTGAGGGCAGTGGC            ATTGCCCG TTGC CGGGCAGG             TACTTCGATAAAACT  50 157
        malK NONE
        lamB 4474817 .. 4474828 +  -7.2  -2.57581   GAATAAGGCGCCAGC                CGCC ATTC GGCG                 ATATGTTTGGGTTGG  57 113
        malM 4475844 .. 4475863 + -11.4  -5.75599   GATTTTGCAGCAACT            GGTGCGTC TCCT GGCGCACC             TTTTTTTATCATTTC 100 59
        ubiC NONE
        ubiA 4477432 .. 4477458 +  -7.3  -3.54543   ATACGTCATATCAGT        TGCCCGATAAGC TTAC GCC-ATCGGGCA         TTTCAGGCACTGGCT  65 83
        dgkA 4480474 .. 4480489 +    -4  -2.84839   TTTTTTGCGCCGTTT              GTGGTT CCAA AATCAC               CTTTAACTGTATATA  46 67
        lexA 4481181 .. 4481233 +  -7.8  -3.17688   TTGTAAGCCGCCATC CGGCAATCGTGTA-GCCTGATG-GCG CTG CGCTTATCAGGCCTACGGGAATGCAG TTCCTGAGATGATTA  64 57
        dinF NONE
 STM474_4433 NONE
        yjbJ 4483364 .. 4483374 +  -6.8  -3.85698   ACCACATAACTATTG                 GTGG ATT CCAC                 TTTATGGACAAAACC  65 395
 STM474_4436 4485176 .. 4485196 + -18.3  -3.70068   TCTGAGGTGCTTTCA            CCGGAGGCG CTA CGCCTCCGG            TTTAGCGTTATGCTA 100 36
        yjbN 4486282 .. 4486305 +  -8.1  -5.27206   TAGTCAATCTCACCA          CGCCCTGTG CAGTCT TGCAGGGCG           TTTTTCTTATATATC  91 56
        pspG 4486797 .. 4486817 + -12.6  -2.54371   GAACAAAAAAAGAAA            GGGCTTCC CGGGT GGAAGCCC            AATTTCTTTGCAGAG  81 161
        dnaB NONE
         alr 4490422 .. 4490448 +  -8.7    -3.494   TTAAATACGCGGCGG        GCCGGGT-GGCG CTTG CGCTTATCCGGC         TTGTATCGCGCATTG  71 37
        tyrB 4491786 .. 4491836 +  -9.6  -3.29541   ATTTGCCGCTGTCAT GTAATATTCAGGCCGGACGGCGAT AAC AGTGCCCTCCGGCCTGACAATAGC TGTTGTGATCATCCT  74 22
        aphA 4492696 .. 4492714 + -10.3  -5.13521   GAGTACTAAAAATCA             GGAGAGC GACAG GCTCTCC             TTTTTTGCATGATTT  93 32
        yjbQ NONE
        yjbR 4493804 .. 4493821 +  -7.7  -3.70104   CGCGGCGGACTCGCG             GATAGCG TCGT CGCTGTC              TTCTCTTGCCTGCTT  65 236
 STM474_4449 4497492 .. 4497504 +  -3.3  -3.07043   GCGAGTGACCTGGAA                CCTGC ATC GCAGC                TATTAAAATGCTACG  45 105
         ssb 4498170 .. 4498189 + -12.2  -4.69053   TCTCGTCTGCTGAAA            TGCCTGGT GTAA ACCAGGCA             TTTTCTTACCTGGTA 100 86
 STM474_4451 4498924 .. 4498952 +  -6.8  -4.30719   CCTAATTAAAAAAAT        GAAGAGTGTTTT TAATT AAAGCACTCATC        TTTGTTGTGGGCGCA  74 309
 STM474_4452 NONE
 STM474_4453 NONE
 STM474_4454 NONE
 STM474_4455 NONE
 STM474_4456 4520455 .. 4520478 + -12.4  -4.00868   CGCATAATAACGGAG          GCCCCTCACC TTTG GGTGAGGGGG           TTTACTTATGGATAA 100 34
 STM474_4457 4522592 .. 4522632 + -13.6  -3.55444   TCAGGTGGTACTGCT  TAATAAAAAAGACCCGTT GCACA AACGGGTCTTTTTTGTCA  TTTAACGAGTCGGCA 100 65
        yjcC 4525421 .. 4525436 +  -6.1  -2.87769   ACAGGAGACGGCGCT              GGCGA ATATAC TCGCC               TAATGTTTGATGCGT  51 171
        soxR 4526167 .. 4526192 + -13.4   -4.4572   TGAGCTCACCTAAAA         CTAAAGCGCC GCTAAG GGCGCTTTAG          TTTGTTTCCGGTCTT 100 61
 STM474_4462 4527185 .. 4527195 +  -3.2   -4.1711   GATAACGTTTGCGCA                 TCGT CTG GCGA                 TTTATTGAGCATACT  60 118
        yjcD 4528803 .. 4528835 + -17.2  -4.07885   GCTCTGCCTTCATTC     TGAAAAACGGGCGGC GTTG GCCGCCCGTTTT-CA      TTTTCAGGACACATC 100 40
        yjcE 4530564 .. 4530584 +  -8.4  -2.82742   GATTTGATGGAAGCG            CTACTGAT AGAAA ATCAGTAG            TCCTTGTGGCCCGGT  64 5
 STM474_4467 NONE
 STM474_4468 4532758 .. 4532800 +  -5.7  -3.14132   TGGCGAGGGTGATGT TCTGA-T-TTTCCTCCGACCC ACA GGGCCGGAGGAAACGGTAAGA TTAATGCGCACGCCC  54 21
 STM474_4472 NONE
        nrfA NONE
        nrfB NONE
        nrfC NONE
        nrfD NONE
        nrfE NONE
        nrfG 4544253 .. 4544286 +  -5.3  -3.14344   ATACCCTTTCAGTAT     GTATTGCTCTCATGCT TTC GGCG-GAGAGCAACGC     TTCATCGAGGAAGTC  52 314
        gltP 4546072 .. 4546094 +  -2.7  -4.21194   TCCAGATCTTCAGAG          GCC-TTTTGC AGCA GCGAGATGGC           TTTTGGGTAGTCCGG  58 478
        proP 4553954 .. 4553969 +    -9  -3.96483   TTTTTCAACAGCACC              CAGGCA CGGG TGCCTG               TTCTTTCCGTACGGT  79 214
        melA 4565057 .. 4565077 +  -6.1  -3.64599   GTTAATCTCCAGCCG            CGCTGGA CGGCAGA TCCGGCG            TTTAACCTCTACTAA  62 36
        melB 4566644 .. 4566657 +  -3.7  -3.91488   CGGCCCGGGAGAACG               CCGGG CCTG CCAGG                TTATTTCGCGCAGTT  57 109
 STM474_4501 NONE
 STM474_4502 4576229 .. 4576239 +  -3.2  -2.53382   TGAACATTCGGGAGG                 TGCG CCA TGCA                 TGAGTTACCGCTGGT  42 12
        dmsC 4576997 .. 4577008 +  -2.2  -5.03747   TACAATCTGTGGACG                CTGC CAAT GTAG                 TTTTTTGCCCGGTTT  71 14
 STM474_4504 4577725 .. 4577753 + -12.5  -3.92592   TACTTGTGCCGCCAT       C-GTGCCCGCTG TTGCGT CAGCGGGCACAG        TTTACTATTACAGCT 100 73
 STM474_4506 4580539 .. 4580558 + -10.7  -5.97575   GTCCTCCTCATATTT            GCGGCAG CGTAGT CTGCCGC             TTTTTTTTATAAATT 100 194
 STM474_4512 NONE
 STM474_4513 4584270 .. 4584287 +  -8.5  -2.82516   TGAAAAGCCGGGATT             GTTTGCA GTCT TGCAAAC              TCTACTGCTCCCACA  57 373
 STM474_4517 4587131 .. 4587147 + -13.7    -4.431   CCAGAAAAGCAAAAA              CCCAGCC ATA GGCTGGG              TTTTCTGAATAAGTG 100 243
        fxsA 4593805 .. 4593846 +  -5.2  -2.77861   TGCTGGCCGGATAAG TCGCGTGAGGCGTTATCCG GCCAA CAGATA-CGTCTTACGCCA TGCGTTTTCGCTTCG  49 50
       groES NONE
       groEL 4597476 .. 4597511 + -18.4  -4.37971   TTATCTCCCAGAATT    GAGAAACCCCCGGGCA GAAA TGACCGGGGGTTTTTC     TTTTAGTCATCTTTT 100 162
        yjeI 4597950 .. 4597980 +   -17  -2.79809   GATATGTCTGAATCG       TAACGCCCTCTGAA AGA TTCAGAGGGCGATA       TGGTTAGCGTTTTTC 100 39
         efp 4600775 .. 4600802 +  -6.2  -3.90762   TTACGTTATCGGGAA        AAATGGTGCAGC GTAT GCTGCGCCATCC         TATTTTTCGCGCCTC  66 42
        ecnA NONE
        ecnB 4601208 .. 4601245 +  -8.6  -4.36914   AGAGCTCAGCAGTAA   TC-ATCAACGGTACGGC ATGGC GTCGTACCGTTAATCGA   TTTTCTCCGGAAGCA  84 26
        sugE 4602482 .. 4602493 +  -5.8  -4.93877   CCGGGTCGCGACGGC                CAGC ATTT GCTG                 TTTTATTTCCTCAGA  83 108
 STM474_4541 4607685 .. 4607701 +  -9.4  -4.43221   TTTCGCGAGATAAAA              TGGCGC AATAA GCGCCA              TTTTGTAGCATATTT  86 56
 STM474_4542 4609390 .. 4609411 +  -2.1  -2.91395   CGGAGTAATCTTTGT           CCGGATAGC GTTA GCTCATCGG            CTTTATGAAAAGGAT  41 33
        yjeO 4609825 .. 4609840 +    -6  -4.09685   TGCGTTTACAAACTC              CCCGCC GGGC GGCTGG               TTTTACCCGCTGACG  68 102
         orn 4616264 .. 4616285 +  -4.4  -3.96624   GATAGCTGTCATAGG           CGACAGGC GTGATA GCTTGTTG            TTTATCCTGCAAATA  60 365
        yjeF NONE
        yjeE NONE
        amiB NONE
        mutL NONE
        miaA NONE
         hfq 4625483 .. 4625517 +  -7.2   -3.6279   TCACGCGCTGTTTAT    CCATGTCGGGGGCG TCGGATAAT CGCCCCCG-C-TGG    TTATTAAGAGGGTTT  67 43
        hflX NONE
        hflK NONE
        hflC 4629324 .. 4629359 + -14.2  -4.37092   GCGGTTTTAGACCAG    CAAAACCACCG-CATCC AAA GGATGCCGGTGGTTTTC    TTTTATAAGGGCGAT 100 51
 STM474_4562 NONE
        purA 4631030 .. 4631064 + -11.6  -3.10975   CAGTGTGATACATTG    CTGTGTCGGGTAAGC CATTAC GCT-ATCCGACACAG     TGTTAAATCCTCGCT  79 80
        nsrR NONE
         rnr 4634090 .. 4634110 + -11.2  -2.64877   GCAGAGTGAGCAATA            CCCTCTTC AAACA GAAGAGGG            TCAATTATCTGTAGG  77 32
        rlmb 4634922 .. 4634959 + -13.8  -3.42663   GCTGATAGTATTTTT   TAAGAAAAAACCATCC ATAATC GGATGGTTTTTTTTTA    TCTTTGACTGGTAAT 100 42
        yjfI 4635597 .. 4635607 +  -5.4  -4.15222   GATAAAGCGGGTAAA                 TCCA GAG TGGA                 TTTATTGGCGCGGGT  65 181
 STM474_4569 NONE
        yjfK NONE
        yjfL NONE
        yjfM NONE
        yjfC NONE
        aidB 4642306 .. 4642317 +  -5.8    -3.737   GTGAATACCACTGGC                CGGT TACA ACCG                 TTTCATCAACCATTA  60 514
        yjfP 4643567 .. 4643587 +  -3.9  -4.60487   TGGGCTTCAAGCTGT            TGCAAAACC TGC GGATTGGCA            TTTTTGCCGGTAATC  69 62
        ulaA 4647204 .. 4647218 +  -2.8  -4.48987   AACTGGCAGAACAGT               CTGCTT AAT AAGGAG               TTTTGATTATGACCG  63 18
        sgaB NONE
        ptxA NONE
        ulad NONE
        sgaU NONE
        sgaE 4650458 .. 4650468 +  -6.8  -3.29324   GCCTCTTCATTCAGC                 GCCA GAT TGGC                 TTCACTTTCCGTGGC  56 263
 STM474_4587 NONE
        rpsF NONE
        priB NONE
        rpsR 4652046 .. 4652056 +  -2.4  -2.50307   TCGCCATCAGTAATC                 GGTC ACG GTCC                 ATTAATACGACTTTG  39 28
        rplI 4652560 .. 4652590 + -11.9   -5.0133   TCGTTTTTGCTAGCA       ACGAAACGTCGGC CCAGC GCCGACGTTTTGC       TTTTTTAACCCCATC 100 51
        yifZ 4653948 .. 4653961 +  -5.9  -3.32865   TATCCTGCTGGAAAG               GCTGC GTCT GCGGC                TGGTTTTGTTCTTCC  56 365
        fklB 4655142 .. 4655182 +   -17  -2.52676   TCTGTAAGCGCCCCG GGTTTGCCGGATGATGGCG TAAA CGCC-TTATCCGGCAACCC  TGGCTTCAGCAGATG 100 34
        cycA 4656921 .. 4656948 +   -12  -2.76696   GGCGCCGTTTACAGC        CGCCATCC-GGCA AAA TGCCCGGCTGGCG        ATTATTCCCCGGCCA  79 108
        ytfH 4660293 .. 4660309 +  -5.8  -3.78934   CCGTATCGCTGTGGA              TTGGCG CCAGA CGCCAG              TTATTATCCGCCGCC  63 235
        cysQ 4663194 .. 4663204 +  -2.4  -4.32402   TCAAGCACGATGACG                 GCGG ACC CCTC                 TTCTTTTAATTGCCA  60 127
        ytfK 4664213 .. 4664233 + -16.9  -3.50335   AAAAGTAAAAAAAAA            CGGCTCCTG AAT CAGGAGCCG            TTGATGTTTCTGGCA 100 66
        ytfM 4668347 .. 4668357 +  -4.6  -2.62316   TTACAGTTTTATATC                 GGTC TGG GGCC                 TGAATTATGAGTTTA  46 5
        ytfN NONE
        ytfP 4672497 .. 4672519 +  -9.9   -5.1925   CAGCCCTGAACTGAA          CA-CGCCACC CTCG GGTGGCGTTG           TTTTTTACATTCTGG 100 32
         mpl 4678646 .. 4678667 + -15.9  -4.52857   AAATGACTATGCGGT           CAGCCAGCC TTGT GGCTGGCTG            TTTTATATGGGGCAT 100 39
 STM474_4614 4679965 .. 4679993 + -15.4  -2.64595   GGAGTAAAAAAACAA        GCCGATGATCGT ATTTA GCGATCATCGGC        ATTGTGGTGAAACTT  93 34
 STM474_4616 4681786 .. 4681798 +  -3.4  -3.88442   CTTTTTGTTCTTTCC                TGGA ACATC TCCA                TTTCGTGATCTTTTG  55 5
 STM474_4617 4683352 .. 4683379 + -17.2  -2.71263   ACCTCTCCAATATTA        GCGGAGAATATC CAGA GATATTCTCCGC         TGGTTACACAACCTT 100 42
 STM474_4620 4687321 .. 4687340 +   -10  -5.72622   TAATCGTCATGAGAA            TGGTCGCA ATAC TGCGGCCA             TTTTTTATTTGTCGG 100 55
        iolE NONE
        iolG NONE
        srfJ NONE
 STM474_4624 4692102 .. 4692135 +  -3.7  -2.71712   ACCAGTAGTGAAAAG     GTTGCGACCGTGGCG CCGC CGTAACGGTCGGGAA      ATTTGGCGCAGAAAA  43 353
 STM474_4628 4697396 .. 4697423 +    -2  -5.10163   ACGGCAAAATAAAAC        G-ATCCGTTTTTC GCA GAACTACGGATGC        TTTTCTTTTGCGGTT  71 129
 STM474_4629 4698519 .. 4698544 +  -8.3  -4.52589   ATTAATAATGAAGAA         ACTCTCGCACT GAAA AGTGTGAGAGC          TTTTCTATACCGAGG  87 49
 STM474_4630 4699851 .. 4699879 +  -7.6  -5.03314   CATCACTAAATTAAA       CCGGTTTTTATCA AGAT TGATAAA-GCCGG        TTTTTTCACCCTACG  86 82
 STM474_4631 4700748 .. 4700776 +    -9  -2.91695   AACAAATTAATCGCA       GC-GTGTCATTGC TGCT GCAATGATACAGC        TAATTTCCAGGTGAC  67 3
 STM474_4632 4701725 .. 4701752 + -12.1  -3.55622   ACGGGTGGATTTGCC        TGTACCGCGCCA CAGGC TGGCGCGGT-CA        TTTGCGGCAATTACC  88 43
        pmba 4703775 .. 4703811 + -11.6  -3.65201   TAATACCCGTCATAC   TTCAGGCTGCAGGC-GC GTTG GCTGCCTGCAACCCGAA    TTATTCAGGGTATTA  87 38
        cybC 4704249 .. 4704298 +  -6.5  -2.79183   AGAAGTATCGTTAAT TTTTGTGGGATGGCGGCTTCGC TTTATCC GC-AGGTCGCCATCCGGCAAAC TGTAATACCCATCAC  53 27
 STM474_4636 NONE
 STM474_4637 NONE
 STM474_4638 4705525 .. 4705538 +  -3.1  -5.06414   ACAGGGTGGATTTCG               TC-GCG AAA CGCTGA               TTTTTATTAAAAAGG  74 12
 STM474_4639 NONE
 STM474_4640 NONE
 STM474_4641 NONE
 STM474_4642 NONE
 STM474_4643 NONE
 STM474_4644 NONE
        relB NONE
        stbE 4713036 .. 4713074 +  -6.7  -3.42996   GGTGTCCAGAAAGCA  TGTAGGCCGGATAAGGTG CTTG CACCGCATCCGGCA-ACA   TTGTGATGCCTGATG  62 513
 STM474_4649 4715630 .. 4715660 +  -6.1  -3.95073   AGTAACCTGGAGCAA       CGCCACAGCCC GTGTCAATA GGTTTGTGGCG       TTTATCCGTATAAGG  66 5
 STM474_4653 4720125 .. 4720154 + -12.1  -2.87564   GAGAATTTTCCTTTT       CCGGTAAGCCTGC CTCT GCTGTCTTACCGG        TGTGTAAGACAGTGA  80 159
        mgtA 4723368 .. 4723380 +  -2.7  -4.45544   AGACTATCTTCGCGG                TAGAT TCT ATCTG                TTTTAATTCCTGGCG  64 413
        yjgK 4732699 .. 4732709 +  -4.6  -4.41633   CTTCGGTCAGGGTTA                 TGGC GCC GCCG                 TTCTTTTTCGCCATG  68 467
        yjgD NONE
        miaE 4734836 .. 4734847 +    -3   -3.3517   GGCGAGCAGAAAAAG                TCAT TTTC ATGA                 TATTCTGTCCTGAGT  47 120
        yjgN 4737852 .. 4737869 +  -7.7   -3.9712   GCCGTCGATGATTTT             GGTCACGG AAA CCG-GACC             TTTGTCATCGGCTGG  71 422
        yjgP NONE
        yjgQ 4745149 .. 4745190 + -13.9  -3.53444   AGGCCTGATGGCGCT GCGCTTATCAGGCCTAC CATGACCC GTAGGCCTGATAAGTCC  TTTCCGCCGCCATCC 100 54
        idnK 4750308 .. 4750318 +  -2.4  -3.25729   CAGGCTTTTCGTCAG                 GCAC TCA GCGC                 TTCCTGATCATTGTC  44 8
 STM474_4686 NONE
 STM474_4687 4756073 .. 4756090 +  -2.7  -2.60615   TTTAGGGCAGGAGTG             TGATTAG CCAT CTTATCA              GTGTTTCCCCAGGGT  40 36
 STM474_4688 4757229 .. 4757257 + -11.9  -3.64541   CGACGATATTGATTT        TATCGAGGAGT TTGACCC ACTCCTCGATA        TATTTAGTTTACTCC  89 106
 STM474_4701 4777610 .. 4777661 +    -3  -4.08216   TGAGCTTTAGTTGAA TAACGCTTGTCTGTGGCATTCAGT GAAG GCTGAATGCCATGGATAATCCAGA TTTTCGCACCAGTGA  56 120
 STM474_4702 4778989 .. 4779008 +  -2.8  -5.47159   TGAATTAGAGTAATG            TGGCGCTA TTCA TAGCGTAA             TTTTTTCTGTTGCGG  83 252
 STM474_4703 NONE
 STM474_4704 4780075 .. 4780088 +  -2.4  -3.37188   CAATAATAAGGGGTA               CAGT ACGATG ACTG                ATTTTTAAACTGCAT  45 35
 STM474_4705 NONE
 STM474_4706 4780761 .. 4780774 +  -3.7  -4.08216   CGTACATTTTACACT               GCACC CGGG GGCGC                TTTTCCAGCGCCTGC  60 171
 STM474_4708 4782425 .. 4782445 +  -8.9   -4.4773   TTATACCTGGAATAG            CGTGGGCAG ACC CAGTCCACG            TTTTACTTCCTGTAG  88 41
 STM474_4710 4784224 .. 4784236 +  -7.7  -3.36515   TAATCACGGAGGGGG                GATGG ACG CCATC                TATTTAAAACTGGAC  65 377
 STM474_4711 4784854 .. 4784875 +  -3.1  -3.92522   ACGGCATTTTTTATA           TACAC-ATCA AGT TGATAGTGTG           TTTCTGACCTTGACG  55 208
 STM474_4712 4786075 .. 4786085 +  -3.2  -4.32034   TATTATCAAACGGCG                 CTTG TTG CAGG                 TTTTCATCGTGATAA  62 456
 STM474_4720 4794889 .. 4794909 +  -6.7  -3.07104   CTGAATGTTGCAGGC            CCGGTGCCC GCC GGGCAACGC            TCTCTATAATTATCG  54 53
 STM474_4723 4796535 .. 4796547 +  -4.8  -4.84761   TTATTTATCCACGTT                GCAC TAACC GTGC                TTTTTATCCCGGTAT  77 148
        yjiS 4796875 .. 4796887 +  -3.5  -4.06785   TTTATATCATTTATA                TTAAT ATC ATTAA                TCTTTTTCTCAATGT  57 119
         mrr 4806092 .. 4806110 +  -5.9  -2.81872   CCCATGCCGGATAGC             GGCTGCG CCTTC TGCGGCC             TACTCTTCTGGTCAA  50 153
 STM474_4732 NONE
 STM474_4733 4806826 .. 4806837 +  -7.2  -3.30124   CCGAAGATGCCGGAT                GGCG GCTG CGCC                 TTATCCGGCCTACAA  63 42
         tsr 4812424 .. 4812437 +  -2.3  -4.07885   TACCAGGCCTGGCAG               TCCGC GCAG GCCGA                TTTTAAACCAGCATC  55 122
 STM474_4738 4815448 .. 4815474 + -10.8  -2.67662   ACCCGCATCTTTTTT         CGGCGCGCCA CTTTTTC TGGCACGCCG         CTTGCTCTCTTTTAT  74 57
 STM474_4739 NONE
 STM474_4740 NONE
 STM474_4741 NONE
        ptnD 4818027 .. 4818038 +  -2.2  -4.17048   GTGGGAATTTTCGGT                TCCT GGAT AGGG                 TTATTTTAAGAGGGA  57 5
 STM474_4743 NONE
 STM474_4744 4820228 .. 4820275 +  -4.9  -4.00132   GTTTATGGATAAAGA TGATGTGTAGGCCGGGTAAGGCG CAGC CGCC--ACCCGGCATATATGACA TTCTCTTTTAACTTT  61 104
        yjjQ NONE
        bglJ 4828375 .. 4828387 +  -6.9  -3.53012   GCTTCTTATTATCCA                GGCGG GCA TCGCC                TTTCGCGACCACCAG  60 339
        yjjZ 4831590 .. 4831603 +  -3.9  -3.37522   TCTAGTGGTTTTCAG               CTATT CGTC AATAG                TTAATTGCATGGGAT  50 434
        holD NONE
        rimi NONE
 STM474_4763 4834356 .. 4834366 +  -6.8   -2.8805   GTCATTAAGCGAACT                 GGAG CAG CTCC                 TGTGTAAACACTGAT  56 1
        prfC 4836072 .. 4836091 + -16.4  -3.33483   ACTGATCCCTTTCCG            GGCGCGGC ATCC GCCGCGCC             TTCGTACTTTCCCTG 100 36
 STM474_4765 NONE
 STM474_4766 4837093 .. 4837119 + -14.5  -2.62184   TAATTCGTCGTAATT        CGTCCTCCCGAC GTTT GTCGGGAGG-CG         TAATGTGCACCACAC  87 38
 STM474_4767 4837401 .. 4837419 + -14.6  -4.28049   ATATATTGCTATCAA             GCCAGTCC AGC GGACTGGC             TTTTACGGTTTTAGC 100 56
        yjjU NONE
        yjjV 4839457 .. 4839468 +  -5.8  -3.75629   CTCTTGCGGCGTCGC                GCCT GGCC AGGC                 TTTCGCTTCGCCATA  61 145
        deoC 4842779 .. 4842797 +  -3.9  -2.73124   CGACGGTAAGAGCGC            CAGCAGCT ACTA AGCT-CTG             ATTTGCCGGATGGCG  45 13
        deoA 4844246 .. 4844256 +    -4  -3.23855   TGAATAGTTGTATAC                 TGAT CTG ATCA                 ATTATTTTTGAAGCA  48 34
        deoB 4845620 .. 4845642 +  -5.6  -3.63922   TCGCCTTCCTACAAC           GCGAAATACT TAG GGTATTTCAC           TGTTTTGACACACGT  59 133
        deoD 4846445 .. 4846477 + -12.1  -4.49556   GATAAAGAGTAAGAT     TG-TGAAGGGGGCC AGAGCA GGCCCCCTTCATCG      TTTATTTCGTCAGCA 100 29
         smp NONE
        serB NONE
        radA 4856280 .. 4856292 +  -5.5  -3.30124   AATTTGCCGGATGGC                GATGC AAT GCGTC                TTATCCGGCCTACGG  56 66
        nadR 4857694 .. 4857738 +  -5.6  -4.42806   GTACTGGAATCGCTG GGTTTGTAGGCCGGGTAAGCG CAAG CGCC-ACCCGGCATTCAGACA TTTATTTGGCAATAC  70 97
         slt NONE
        trpR 4861959 .. 4862009 +  -6.1  -3.33261   CGTAGGCCGGATAAG GCGAAGCGGCCATCCGGCAACATCG CCG CGAAAT-GCCTGATGGC-GCTGTGC TTATCAGGCTTACAA  59 47
        gpmB 4863521 .. 4863531 +    -4  -3.23692   TGCGGCAGTGCGGTG                 GTAT AGA ATAC                 TTCCTGCTCATCGTC  47 296
        creA NONE
        creB NONE
        creC NONE
        cred 4868436 .. 4868456 +  -5.3  -4.46212   TGGCATTCGCTTGCC            CGGCCGTTA CCG TGGCGGCGG            TTTTATAGTAGCGCG  70 127
        yjjY 4877000 .. 4877012 +  -3.4  -3.73968   GATGAAATCATCGTA                GCTA AATGC TAGC                TTTCATCACAAATTT  53 122
        lasT NONE
        arcA 4875897 .. 4875923 - -13.1  -4.38927   GGGGGACATAAGAAA         CAGCCAGTAAG AATAA CTTACCGGCTG         TTTTTACAGTTTGGC 100 53
 STM474_4803 4875298 .. 4875343 -  -8.9  -4.70046   GAGAAAAGTACAAAA TGCAGGCGGGCGGCGTTTT-AC TGA GCGAAATCGCCGCCTGCCGGAA CTCCTCCCGGCGGGA  90 52
 STM474_4802 4874028 .. 4874044 -  -5.3  -4.56358   GATAGCCATATAAAA              TAAAATA TTA TATTTTA              CTCTGTATGCGCTTC  71 295
 STM474_4801 NONE
        sthA 4872683 .. 4872699 -  -5.8  -2.59742   GTTAATGGCTAGAAT              GAACCG GAATG CGGCTC              TAAACTCATCCCATA  50 2
        sthB 4870094 .. 4870110 -  -2.1  -2.64747   TTATCCCACCAGAAT              CACTGGC ATT GCTCGTG              TAAGATTTCTACGCC  39 8
        sthD 4869486 .. 4869502 -  -2.2  -2.65504   TTCTCATGAAAAATT              CCTGCT TTTAT ACCAGG              TGAAATAGAAAGATG  39 41
        sthE 4868341 .. 4868377 -  -8.6  -3.41807   TGGAAATAAATCTAA   CGGGCGC-GCGCGTTAA CGTT TTCCCGCGCAGCGCCAG    AAACTGTGATGCCGT  69 40
         rob 4862783 .. 4862813 -    -6  -4.37886   TTAGGCCGCACAAAA       CGCACGGCGGAG ATTATCG CCCAGGCGTGCG       GGTGTGATATCACCT  73 459
        yjjX 4861958 .. 4861985 -    -9  -3.30124   TCGTAGGCCGGATAA        GGCGAAGCGGCC ATCC GGCAACATCGCC         GCGAAATGCCTGATG  71 79
        yjjK 4857631 .. 4857663 -   -12  -2.74443   GGGATAAGAACCAAT      GCCTGATGCGACGC TTACC GCGTCTTATCAGGC      CTACAGTTTCACAAC  79 102
 STM474_4782 NONE
        lplA 4851955 .. 4851988 - -12.7  -3.57144   GTTGTTATGTTTAAA     TAATATCAGAGACAC ATTC GTCTCTCTGATATTA      TTCATTTAGCGCACA  95 31
 STM474_4780 NONE
 STM474_4779 NONE
        stjC NONE
        stjB NONE
 STM474_4776 4846445 .. 4846476 - -10.1  -2.58491   GATAAAGAGTAAGAT      TGTGAAGGGGGCC AGAGCA GGCCCCCTTCATC       GTTTATTTCGTCAGC  70 28
        yjji NONE
        yjjW 4838998 .. 4839014 -  -7.9   -3.6682   GGCGATGCACTTAAA              GCGCCAG GAT CTGCCGC              GAACCGGTGTGGTGC  65 381
        rsmc 4831663 .. 4831675 -  -9.1  -3.30243   ACGTAGGTTGGATAA                GACGC TTT GCGTC                GCCATCCGGCACATG  71 72
 STM474_4755 4829544 .. 4829554 -    -4  -2.76885   AATCTAAATGATAAT                 GATT GCT AATC                 CTATCGATAGCGATA  45 101
        fhuF NONE
 STM474_4753 4827591 .. 4827617 -  -6.4  -3.28745   GCGTTAAGAACTGAA         CGCCGGACAGGA TTA TCCAGCCTGACG         GAACTGGCGATAAAT  59 520
 STM474_4750 NONE
        yjjB 4824732 .. 4824745 -  -3.7  -2.85545   CCTGTAAGAACAGCA               GGAGG CGTT CCACC                AATCACACGCGGGGG  46 28
        dnaI NONE
        dnaC NONE
        yjjA 4822636 .. 4822650 -  -4.2  -3.20751   TCTAACAATGTAATA               GCGATG TCA CATTGC               TGCAATTCTAATAAC  48 232
        mdoB 4820173 .. 4820205 -  -7.8  -2.94099   GGCGTGTAGCATATA     CAGTGCCTGAT-GGCG CTT CGCTTATCAGGC-CTG     TGCGCCAGTTTATGG  61 103
        yjiY 4808079 .. 4808107 -  -7.5   -4.3255   CTGTTAATGAATAAA       GCCGGAT--GGCG GCTTG CGCCTTATCCGGC       CTACACTAGCCGGGG  77 67
        yjiX 4807855 .. 4807875 -  -3.2  -3.14344   TAGTCTCTCCATTAA            CAACAGCG CATAC CGCCTTTG            CCATCGCCGCCGTAA  46 1
        yjiA 4806528 .. 4806545 -  -5.5  -4.33258   ATGGTTAAACATAAA             CGCGG CAACGCAT CCGCG              CTGAGTGCTCAGCAT  69 364
        hsdR 4801307 .. 4801323 -  -9.4   -2.5955   AGGCCGGATAAGGCA              TCGCCG CCATC CGGCGA              AAACGGGGATGATAC  68 45
        hsdM NONE
        hsdS 4798158 .. 4798176 - -11.7  -5.38549   GGGAAATAATAAAAA             GCGCACC GGGAA GGTGCGC             TTGAAAATAAAGGTC 100 39
        yjiW 4797595 .. 4797617 -   -12  -4.04295   TGAATTATAATTAAA           GCTGGCAAGG GTT CTTTGCCAGC           TTATTTTATGCGTTT  93 39
 STM474_4726 NONE
 STM474_4724 4796160 .. 4796188 -  -3.8  -3.35046   GTATGTGGTGAAAGA        CGATGACGAG GCGGTAAAA CTCGCCAACG        ATTCCCACTACGGCC  50 344
 STM474_4722 NONE
 STM474_4721 4794370 .. 4794382 -  -9.1  -3.07043   TCGACGACCTCAACA                CCGCA TGA TGCGG                TGTTTAAAACCTTTT  63 501
        yjiO 4792591 .. 4792624 -  -4.5  -2.73364   AAAAACATCAGATTA     TCCTGTGCCGGATAA GCCT CTATCCGGCAGAGTG      TTTACTTCTCAGCGG  47 27
        yjiN 4791197 .. 4791213 -  -9.5  -2.72144   GCATCGGTGGGAAAT              GGCATTA AAT TAATGCC              TCCCACGTGCGGGGT  69 80
        yjiJ 4789712 .. 4789746 -  -9.6  -3.78034   TAGGCAGATTAATAA     CACTAAAAACCATA GAATAAG TATAGTTTTTAGTG     GCATCTTTACCTTGA  79 143
        yjiH NONE
        yjiG NONE
        iadA 4786644 .. 4786658 -  -2.8  -3.28924   CATCCTCTTTCAGAA               TGCC GTGATGG GGCA               GCCTGAAACTAGCGG  46 44
        yjiE 4785412 .. 4785440 -  -8.2  -4.37658   AACGTGGCGATAAAA       CTGCGGC-GCAAGC GCT GCT-GCTGCCGCAA       ATCGATAGCCTTATT  81 235
       trpS2 4782271 .. 4782292 -  -4.3   -3.7642   GTTAATTAAGAAAGA           CGCCCGC GCAGCGAA GCTGGCG            ATGTGGCAGCACCTG  55 143
 STM474_4707 4780418 .. 4780428 -  -8.2  -3.66178   TTTGGCAATCCTAAA                 GGCG GAA CGCC                 TCTCATGCTGGCGCA  69 209
 STM474_4700 NONE
        yjhP 4774486 .. 4774515 - -10.2  -2.75343   TGGATACTTTTAAAT       GGAGGTATA-CCT CTTGT AGGCTATACCTCC       TGCTTCACGTTATCG  71 35
        yeeN 4773207 .. 4773241 - -13.9  -3.89501   TAACAGCTTTATAAA     TTAAACAAATCTGCC ATAGA GACAGATTTGTTTAA     TTTATAATTAGAGGT 100 33
 STM474_4697 4772446 .. 4772456 -  -6.8  -3.02511   TCTACCCTCTGAAGA                 CTGC TAT GCAG                 CTCGCAAAAAAACAA  58 185
 STM474_4696 4771812 .. 4771826 -  -2.1  -2.75064   GGCGGTATTCAAGCA              CGG-GA TCGA TCACCG               TTGTCCCTCCAGAAT  40 20
 STM474_4695 NONE
 STM474_4694 4767539 .. 4767557 - -12.4  -3.61219   AGAAAATCCTGCAAA             GGGCAGCA GAG CGCTGCCC             TGAAATGGGGGTTAC  95 37
 STM474_4693 NONE
 STM474_4692 NONE
 STM474_4691 NONE
 STM474_4690 NONE
 STM474_4689 4756799 .. 4756815 -  -3.6  -4.54047   GCATGGGATATAAAA              CCCAGG TATCG CCTGCG              GGTGCTGACCGCGAA  69 471
        yjgB 4750337 .. 4750350 -  -3.1  -3.58343   CTGATCATTGTCAAA               GCGCTG AGT CAG-GC               GGTCAGAAGTCAGCT  51 28
        idnD NONE
        idnO NONE
        idnt 4746381 .. 4746392 -  -2.2  -3.41693   CGGATGATGAATTAA                TGCA GAAC CGCA                 TTCAGCGCCAGTACG  45 10
        idnR 4745130 .. 4745167 - -12.1  -3.32647   TCGTAATCACAGTAA   TCGTAGGCCTGAT-GGCG CTG CGCTTATCAGGCCTACCA   TGACCCGTAGGCCTG  85 173
 STM474_4676 NONE
        pepA 4740958 .. 4740994 - -11.6  -3.30124   CCGTAGGCCGGATAA   GCGCAGCGCCATCCGGCA AAA CGCCTGATGGCG--GCGC   TAATGCGCCTTATCA  83 63
        holC NONE
        valS 4737464 .. 4737483 -   -15  -4.66609   TATCTGATGTAAAAA            GGCCGACG TTTA CGTCGGCC             CATAATTCATGTTGT 100 139
        yjgM 4735490 .. 4735517 -  -7.8  -2.71503   TTGAATAATAAGTGA        TTCCCGGATAACA GGA TGTT-TCCGGGAT        TATTTATATCAGCAA  60 78
        ytgA NONE
 STM474_4669 4734436 .. 4734457 -  -7.9   -3.6288   AAAGGAATGTTGAAA           GCGGTACGC ACGC ACGAACCGC            TCACCTTAATTGATA  65 342
        argI 4732136 .. 4732154 -  -5.2  -4.46212   GCGTCGACGAGAAAA             CCGTCGTC CTG AACGAAGG             CGACTTTGTGGTGTT  70 202
 STM474_4664 NONE
 STM474_4663 4728938 .. 4728950 - -10.5  -3.63515   CTGTAGGCCGAATAA                GGCGG AAG CCGCC                ATCCGGTAAAAAGCC  78 41
 STM474_4662 4727815 .. 4727843 - -13.2  -2.62184   TCTCTCCTGATATCA        CGGATATGCGCC GCGAG GGCGCATATCCT        GTGGGATTAGTCGCC  84 32
 STM474_4661 4726370 .. 4726380 -  -4.6  -3.48395   AGTCCTGTCAGATAA                 GACG CGT CGCC                 ATCTGGCTCGTTACA  54 36
 STM474_4660 NONE
        pyrL 4725521 .. 4725536 - -10.4  -6.06723   CTGGGCAAAAAAAAA              CCCCTC AATT GAGGGG               CTTGGTATTGGTTTT 100 14
        pyrB NONE
        pyrI 4724070 .. 4724087 -  -3.4  -3.32844   GCCGGGATCTCATAA             CCAACC CAAATT AGTTGG              CCAGCACCACATAAT  48 18
        yjgF NONE
 STM474_4655 NONE
        treR 4718430 .. 4718449 -  -5.6   -3.9344   AAGCCTAAGATCAAA            CCGCCGCT GATC AACGCCGG             TAGTAGCGGAAAGAA  63 517
        treC 4715630 .. 4715660 -  -3.9  -3.16921   AGTAACCTGGAGCAA       CGCCACAGCCC GTGTCAATA GGTTTGTGGCG       TTTATCCGTATAAGG  48 49
        nrdD 4713036 .. 4713074 -  -8.9  -3.00946   GGTGTCCAGAAAGCA  TGTAGGCCGGATAAGGTG CTTG CACCGCATCCGGCA-ACA   TTGTGATGCCTGATG  68 88
        nrdG 4712174 .. 4712192 -  -7.4   -4.1899   GCATGCCAGTGAAAA             CCGTCACT CTT AGCGACAG             TGAAGATGCATTGAT  74 385
        yjgA 4701670 .. 4701688 -  -5.9  -3.53811   TTCAGGCGGTGGAAA             CGCGCGA GCGGA TCGAGCG             GGAGCTACTCGGACG  57 100
 STM474_4627 4695042 .. 4695058 -  -5.9  -2.85545   GTTTGAACAAGATCA              CAGAAAT GGC ATTTCCG              GGCAACGGGCATGAT  51 91
 STM474_4626 4692955 .. 4692983 - -16.7  -3.02043   AATCGTCCTTGAACA        CGCCCCTTGTCCG ATG CAGACACGGGGCG        TGATGAGGCAGGCAT 100 40
        yfcJ 4691347 .. 4691358 -  -7.2   -4.1552   CAGTGGCGGAAGAAA                GCCG GATG CGGC                 TGGCCTTTGAGCCGA  74 438
        mmsA 4684526 .. 4684536 -  -6.8   -3.2048   CTGAAAGCGTATTAA                 CCGA GAG TCGG                 CATACTGAACTCCGA  59 11
 STM474_4618 4683644 .. 4683666 - -12.7  -5.46657   GAGTTGAATAAAAAA           GCCAGCCGC AGAGG ACGGCTGGC           AAAGTACCACTCAAC 100 47
 STM474_4615 4679962 .. 4679997 - -12.8  -5.53991   GACGGAGTAAAAAAA    CAA-GCCGATGATCG TATTTAG CGATCATCGGCATTG    TGGTGAAACTTAATC 100 35
         fbp 4676015 .. 4676050 - -13.3  -3.23274   GGCCTGATAAGGCAA    CGCCGCCATCGGACA TGTTAT TGCCCAATGGCGGCT     TCATGCGTTATTCCG  91 55
         ppa 4675272 .. 4675293 - -10.9  -5.11063   ATTAGCCAATAAAAA           GGCCCTCAT TACT ATGAGAGCC            TTTATCTTGACGCTT 100 55
 STM474_4610 NONE
 STM474_4609 4672499 .. 4672516 - -12.7  -3.14878   GCCCTGAACTGAACA             CGCCACC CTCG GGTGGCG              TTGTTTTTTACATTC  86 53
        msrA 4665672 .. 4665693 -  -5.1  -4.41895   AACGTTTAATGAAAA           CCGGCTC GTAGCAGT GAGCCGA            TAAGTTCAGGGCTAG  68 115
        ytfL 4664213 .. 4664233 - -16.9  -6.31682   AAAAGTAAAAAAAAA            CGGCTCCTG AAT CAGGAGCCG            TTGATGTTTCTGGCA 100 49
 STM474_4602 4662901 .. 4662918 -  -5.5  -3.53012   GGTTCCTCGCTGAAA             TTCTGCC TTGT GGCGGAA              GGCCAGGCGCAGCTT  55 189
        cpdB 4660074 .. 4660127 - -19.3  -2.79831   GGAACGTTTATCAGA TGGCGGCTAGCGCTTTATTCGGCCTG CCAGT CAGGCCGAATAAA-CGC-AGC-GCCA TACGGGACACACGTT 100 39
        ytfG NONE
        ytfF 4657718 .. 4657737 -  -7.8  -2.98493   GCGAGTATGAAATTA            GCGTTCCG TGAC CGGAACGA             CGGTCGCTTTTTCCG  62 3
        ytfE 4656428 .. 4656451 -  -4.6  -4.07568   GGCGTGGCGCCAAAA          GCGTT-CGCTA AGC TATCGAAACGC          GCGGTACCGGCGAAA  62 524
        ytfB 4653596 .. 4653617 - -10.2  -3.61398   TTGGTGGGTGAATAA           GGTGAAGC GGTAAT GCTTCACC            TGAACGAATAGGGTA  78 66
        yjfY 4650295 .. 4650312 - -12.7  -5.00616   CTTTCCGCGAAAAAA             GCCCCCT GCTC AGGGGGC              AAATCAACTATGGCT 100 62
        ulag 4644359 .. 4644376 - -12.7  -5.22943   AGTAAATGGAAAAAA             TGCCGGG TAAT CCCGGCA              TGATATCGACTCACA 100 36
        yjfQ 4643394 .. 4643411 -  -3.3  -3.64703   TGCCTGCTATCGAAA             CCTTCCG GCTC CAGCAGG              CACTCGCCGCGGCGA  51 141
        yjfO 4642247 .. 4642259 -  -2.7    -3.192   AAAGCAATGTAAAAC                TGACT AAA AATCA                ATCTACTGTTATTGA  45 34
        yjfN 4641518 .. 4641541 -  -3.1  -4.36914   CGGGTGCTGACAAAA          CAACACGGC GTCTAT GACGTATTG           AGTGAAGCTTTTGCG  62 346
        yjeS 4617320 .. 4617334 -  -8.6  -3.76413   CTCCAAAATTTGAAA               GTGCTT GTT AAGCAC               AGACCACCAATCGCA  75 502
 STM474_4548 4615934 .. 4615968 - -11.5  -3.04144   CTGTGAGGCGTAACA    TGCCGGATGGCAACGC CAGA GCGTCTC-ATCCGGCA     GCTCTCCCCACACTG  79 43
 STM474_4546 NONE
         psd NONE
 STM474_4544 4609822 .. 4609835 -  -3.7  -3.86015   CATTGCGTTTACAAA               CTCCC CGCC GGGCG                GCTGGTTTTACCCGC  55 5
        frdA NONE
        frdB NONE
        frdC NONE
        frdD 4603022 .. 4603050 - -11.8  -5.83211   CAGGAAAAGAAAAAA        TGCCCTCTTATC GGGTA GATAAGAGGGCG        TCGTGGCAACTTAGA 100 36
         blc 4602400 .. 4602422 -  -3.4  -3.14931   CTCAGTGCGCATTAA           TTCGTCGC TGATATT GCTACGAA           CCTGATTGTTTTACC  46 19
        ecnR 4600778 .. 4600799 - -10.1  -4.59773   CGTTATCGGGAAAAA           TGGTGCAGC GTAT GCTGCGCCA            TCCTATTTTTCGCGC  91 464
        yjeK 4598953 .. 4598971 -  -4.4  -2.76291   TAATTCGAAAATGCA             GTACACGC TAA GCGAGTCC             TAAAACGGACTTTAT  47 177
        yjeJ 4597482 .. 4597505 - -13.8  -4.00066   CCCAGAATTGAGAAA          CCCCCGGGCA GAAA TGACCGGGGG           TTTTTCTTTTAGTCA 100 504
        yjeH 4593488 .. 4593513 -  -2.5   -5.4833   TGATGCAACAAAAAA         TGGCGGCCGG TGAGAGC CCGGCGGC-A         GAAATGATTAAGAGT  85 351
        aspA 4591484 .. 4591504 - -15.5   -5.4505   TCTTGTAAGAAAAAA            GGCACGTCA TCG TGACGTGCC            TCTTTGGTACTACCC 100 48
        dcuA 4590078 .. 4590100 - -14.8  -3.30635   CAAAGGGCGGGAGAA           TGCGGGGCGT GAT ACGCCCCGCG           GGTGAAACACTTACA 100 36
        cutA NONE
        dipZ NONE
        yjdC 4587131 .. 4587147 - -13.7   -5.1417   CCAGAAAAGCAAAAA              CCCAGCC ATA GGCTGGG              TTTTCTGAATAAGTG 100 230
 STM474_4516 4585727 .. 4585748 -  -9.5  -5.42259   TCAGGCGCAAAAAAA           CAGACTTGC GCTA ACAAGTCTG            TTCTTTAAGAGCCTT 100 302
 STM474_4515 4585077 .. 4585089 -  -6.2  -3.58527   GACAACAGAACAATA                CCGG TACTT CCGG                CTAACAGCATTTTGT  62 524
        phoN 4584088 .. 4584102 -  -3.5  -4.06055   ATCGGGGAAACCAAA               GGCAT TCTCC ACGCC               CGGCCGCCCCTACGC  57 93
 STM474_4511 4582377 .. 4582402 -  -2.7  -4.54727   GCGTGTAAATCAAAA         TTATTCTGAAA AATA TTTCAAAAGAA          AACTAATATATAGCT  63 226
 STM474_4510 NONE
 STM474_4509 4581187 .. 4581198 -    -3  -3.21225   GGAAAAATTACGTAA                TATC GACT GATA                 TGTAAAACTCATTCA  45 6
 STM474_4508 NONE
 STM474_4507 4580603 .. 4580613 -    -4  -2.83022   TAATTAACAGACAAT                 GAAT ATT ATTC                 TGTTTTTTCAGCAGG  45 76
 STM474_4505 4577440 .. 4577453 -  -2.4  -3.04263   ACGCGAGCCGGAAGA               TCAG TTTGGC CTGA                TGCTATTGGCCTGTA  42 333
        dcuS NONE
        dcuR 4570300 .. 4570314 - -11.4  -4.98531   TTTTGAAATTAAAAA               CAGCGC AGA GCGCTG               TAATAATAGAAAATA 100 181
 STM474_4498 4569827 .. 4569847 -  -5.4  -3.80841   ATGAGCATCAGGAAA            TGGCGAAT ATTCA ATGCGCCA            GTGGCGACGATTAAC  61 65
        dcuB 4568380 .. 4568396 -  -9.3  -3.28712   GCGCGCCGCGCATAA              CCGGGCG GCG CGCGCGG              CCATTACAGGAATCC  71 29
        fumB 4566588 .. 4566613 - -11.9  -3.30124   GTGCAGGCCGGATAA         GCCGGATAAGCG TAG CGC-CATCCGGC         AATTAACCGATAACG  85 70
        melR 4562317 .. 4562346 -  -6.5  -3.14344   GACCCGCCGTATGAA       TGTGACGTGGGCAA GTA TTACCC-CGTCAAA       TAGGGGGTGTAAAGT  57 169
        adiA 4559891 .. 4559910 - -12.1  -5.60993   TTTTGTATAAAAAAA            GCGCGGG ATGGGG CCCGCGC             AAAAAGGTATGACAG 100 105
        adiY NONE
        yjdE 4557368 .. 4557382 -  -2.9  -4.61873   CGTGACAAAGTAAAA               TTAAG TGAAC CTTAA               GAACTTAATGTTGGT  65 97
        yjdB NONE
        basR NONE
        basS 4553604 .. 4553614 -  -8.2  -4.08064   AATCGTCCGTTAAAA                 GGCG CAA CGCC                 AGCGGCGTCGGACAT  77 343
        phnA NONE
        phnB NONE
        phnO 4550192 .. 4550203 -  -3.6  -2.94232   TTTTTGCTAAAGAAG                CGAG TCAG CCCG                 TTTAACCTTTATCCA  44 133
        lpxO 4549108 .. 4549141 - -14.6  -3.55219   AACGCCAGGATAGAA     CAGGCCGCGGCA-GG CAGTT CCATACCGCGGCCCG     GCTTCAGAGGAGGCT 100 29
        fdhF 4546526 .. 4546545 - -13.6  -5.64274   GTATGGATAAAAAAA            CAGCCTCC GGGC GGAGGCTG             TTATAGGGAAAATGC 100 123
        yjcO 4545566 .. 4545583 -  -6.9   -5.0538   TTTGACCGCAAAAAA             GCGCTGG CCTA CGAGCGC              GACGTGCTGGGCAAA  86 219
         acs 4534766 .. 4534781 -  -3.2  -2.80816   TGGTCATTCATCACA              GAGCTC TCCA GAGGTC               CCCCTGCGTCTTTCG  43 251
        yjcH NONE
        actP NONE
 STM474_4466 4530514 .. 4530528 -  -8.6  -3.01918   CCACGCGAGAAATCA               GCAATG AAA CATTGC               AAAAGCTGCTGCACG  60 176
 STM474_4463 4527252 .. 4527265 -  -2.3  -4.62336   AGTTCAGTTGAAAAA               GCGTT GATG ATCGC                TGGATAATCGTTTGC  64 0
        soxS 4525229 .. 4525256 - -11.2  -4.30719   CCTGGCTACAACAAA        CGCCCGCGCCTC TGAC GATACGCGGGCA         GACGCCCTACAGGCG  93 32
        yjcB 4522602 .. 4522622 - -11.2   -5.4505   CTGCTTAATAAAAAA            GACCCGTT GCACA AACGGGTC            TTTTTTGTCATTTAA 100 233
        uvrA 4494467 .. 4494502 -  -9.7  -4.77036   TGGGATGAGGAAAAA    TGATGCCGCTTCCCG GCGAAT CGGAAAGCGGCGTGA     AGGTTATTTGAGCAT  91 29
 STM474_4447 NONE
 STM474_4446 4493391 .. 4493405 -  -4.2  -4.07885   CAGCCTCTCTCAAAA               CCAGCC CGG AACTGG               CAGAGTTGTTACGTC  62 214
         qor 4486793 .. 4486823 -  -5.6  -5.80364   AGCCGAACAAAAAAA      GAAA--GGGCTTCC CGGGT GGAAGCCCAATTTC      TTTGCAGAGCTATTA 100 38
         zur 4482956 .. 4482982 -  -5.3  -2.94422   CAGGCGGAAAAAGAG        GTTGTTGACTGGG AAA CCC-GT-AACAAC        TATCGCTGGTAATAT  50 136
        plsB 4477055 .. 4477065 -  -6.8  -2.78596   CAGTGGCTTACGATA                 CGCA ATA TGCG                 ATGGTCGACAGAGAT  52 433
        malE 4470585 .. 4470596 -  -5.8  -3.30124   TTGTAGGCCGGATAA                GGCA TTTA TGCC                 GCCATCCGGCACAGG  56 50
        malF NONE
        malG 4467944 .. 4467959 - -10.4  -5.66684   TAACGCATAAAAAAA              GCGCTC CGAA GAGCGC               CAAAATACGACCATA 100 106
        lysC 4459396 .. 4459408 -  -4.8  -4.13767   CGCGTCAGCCGAAAA                TGCC GGTCA GGCA                ATTGCTGACAGAATG  62 377
 STM474_4412 NONE
 STM474_4411 4457818 .. 4457830 -  -4.8  -2.63723   CTCTGATTAATGAAT                GCAG CTAGC CTGC                CCCCATTGCAAATAA  48 4
 STM474_4410 4457446 .. 4457484 - -12.7  -4.75954   AAAAGTTAAAACAAA  TAAA-AAATCCCCGGCGT ATAA ACGACGGGGATTTGTTTA   ATGGTTACCTCGTTG 100 23
 STM474_4409 NONE
 STM474_4408 NONE
 STM474_4407 NONE
 STM474_4406 4454708 .. 4454727 - -13.6  -3.53091   ATTCGTCGTGTTAAA            TTCGGGGC CGTA GCCCCGAA             GTAATTAACCGCCAA 100 30
 STM474_4405 NONE
 STM474_4404 4454265 .. 4454287 - -12.7  -3.72576   GCTTGGGTCAGGAAA           CCCGCAGGC ATTAA GCCTGCGAG           TCGTATTCGTGTTTA 100 13
 STM474_4403 4451815 .. 4451830 -  -2.6  -3.02144   CTATTTCGCCTAATA              CGGCATA CAT TATGC-G              TACTCCCGGCGCCGT  43 19
 STM474_4402 NONE
 STM474_4401 NONE
 STM474_4400 NONE
 STM474_4399 4448713 .. 4448725 -  -6.3  -3.14839   TACATATATGCAATA                TTTGC AGC GCAAA                GTGATTACATTTTCA  57 199
        gtrA 4448202 .. 4448215 -  -3.9  -2.56343   ACGGGAACCACTAAT               GAAAT TTTC ATTTC                TCATTCCTGAAAACA  44 19
 STM474_4397 NONE
 STM474_4396 4445742 .. 4445760 -  -4.7  -4.36595   TACGTAAAGTTAAAA             TGAAATT GCTGT AATTTCA             CCTTTGTCTACAGAA  66 1
 STM474_4394 NONE
 STM474_4393 NONE
 STM474_4392 NONE
 STM474_4391 4441745 .. 4441755 -  -2.6  -2.83343   ATATTCACCATGAGA                 TTTT TAC AAAA                 CCGCTAGAACCGCGT  41 4
 STM474_4390 NONE
 STM474_4389 4440644 .. 4440666 - -10.5  -3.15354   TATTTTAATTCAACA           CCGCCGGGC TTTAT ACCCGGCGA           GAGATTCAACAATCG  74 31
 STM474_4388 4440045 .. 4440057 -    -2  -2.79831   CGAAGTTTTATTACA                TTCA AGATG TGAA                TGTAATTTATTTGTT  40 101
 STM474_4387 4439118 .. 4439131 -  -3.7  -2.52896   CCATCCGGCAACGTA               TCGCC CGAT GGCGC                TTACGCTACCGTATT  42 102
 STM474_4385 NONE
        yjbD 4437630 .. 4437643 -  -2.3  -4.60258   GGACGAAAGAAGAAA               GGACG TTAA CGTCT                GCCGCGCGTCGGCGT  64 17
        pepE 4435217 .. 4435268 -   -13  -3.79043   GAGTATTAAGTGAAA TGCCGGATGGCGGGGCCTACGGAGA ACA TGCGCGTAGGCCC-GTCATTCGGCA TTCAATATGGCCTGG 100 43
        iclR NONE
 STM474_4376 4427815 .. 4427830 -  -4.7  -2.63112   AAATTTGCTACATGA              CGGAA GTGAAT TTCCG               CGATATTCCGCCAGC  44 278
 STM474_4370 4421390 .. 4421409 -   -15   -3.7956   CAAACAAGTGAAGAA            GCCCGTCC GTCA GGACGGGC             TTTTTTGCGTGTGCG 100 153
 STM474_4363 4415414 .. 4415455 - -20.5  -2.96216   TTTGACGATTACAGA GAGCGTTAGCTGAATTTTT CGTG AAAAACTCAGCTAACGCCC  CTTATGGGGTATTCT 100 279
        purH NONE
        purD 4412420 .. 4412447 -  -9.7   -5.0538   CGGCACTGGAAAAAA        CGGGCGGCAAC AAAACG GAAGCCGCCCG         TCAATTGGGCATTAC 100 71
        zraP 4409025 .. 4409048 - -12.4  -3.08679   GCTTTTGATGGAATA          CCGGATGGCG AAGC CGCCATTCGG           CAAACATGCTTTACC  83 36
         rsd 4404030 .. 4404052 -  -6.8  -3.75378   ACTCCGACAAGATAA           CCGCCCCTCC GAA GAGGGGGCTG           AAGTAAACTACCCGT  66 55
        thiC 4401813 .. 4401828 -  -3.2  -2.90615   ACGGTGGGGAAATCA              GGCTGA TACA TCAGGC               TTCCTCCCGCTTGAG  44 20
        thiE NONE
        thiF NONE
        thiS NONE
        thiG NONE
        thiH 4398278 .. 4398301 -  -8.8  -6.14618   GACAAAATAAAAAAA          CGGGAGGTCG ATAA CAATCTCCCG           TTTTTCGCATTACGT 100 78
 STM474_4342 NONE
 STM474_4341 4395577 .. 4395604 - -14.2  -3.61764   CGAGTAATCGTTAAA        TGGTGGAGGGGT ATTT ATCCCTCCACCA         GCTTCATGCTGGATA 100 360
 STM474_4325 4381008 .. 4381021 -  -5.3  -2.62983   GCTATTGCTACATCA               GTTCA GCGA TGAAC                GAGGGCCATCCCTGA  48 189
        coaA 4379998 .. 4380017 -  -7.8  -4.87626   GCCGAATAGTAAAAA            GGGGGAGT CGGT ACTCCCCT             TTTTTCTGTTATTTC  86 34
        trma 4367996 .. 4368009 -  -4.5  -3.53811   TGGATTGGCTTTAAA               CTGCG TAAC CGCAA                GCAGGACACCGCGGA  54 91
        sthA 4365372 .. 4365383 -  -5.8  -2.52516   GCCGTTATGAGCAAC                TGGC AGAG GCCA                 TCCGTGGCGCAATGG  48 61
        argE 4359508 .. 4359526 -  -7.4  -3.85698   GCCGTCTTTTATAAA             GCCACG TAAAACC CGTGGC             GTCAATTACTGCGAA  68 211
         ppc 4356590 .. 4356602 -  -6.3   -4.0056   AGAAAGATTTACAAA                TGCAT AAA ATGCA                GACAGAAATATATTG  66 115
        yijP 4354593 .. 4354617 -  -2.1  -3.49777   CGTGATACATGATAA          TCCCCTGCC GATCGCA AACAGAGGA          AACAGTAACGTCGAA  47 156
        yijO 4353232 .. 4353245 -  -8.1  -4.27441   ATCATTAGGAATAAA               GCAGG TTCA CCTGC                TACCGTTTCATCAGT  81 516
        ptsA NONE
        talC NONE
        gldA 4344107 .. 4344130 -   -14  -3.67976   GTCAGCAAGCTGAAA          TACTCCTGAC TATC GTCAGGAGTA           TTGCTCAGACCTTAT 100 37
        yijF 4343048 .. 4343062 -  -8.5  -3.42605   GCGAGGTAAAATACA               CGGCG ACCCG CGCCG               ATCTGGTGTTTGGTT  64 223
 STM474_4288 NONE
 STM474_4287 4335644 .. 4335675 -  -5.2  -4.19258   ACATTCCAGCCAAAA      TGAATTACCGAGTCA CTG TG-CTCGGCCATCCA      TTTGATCGCGCCTTT  65 73
        metJ 4330534 .. 4330560 -  -6.5    -5.055   GGAATCGTTAAAAAA         GCGCGGCCAGA GGCGT TCTGACCGCAT         GCTTTGCTATCAGTA  83 35
 STM474_4281 4328276 .. 4328303 -  -9.8  -2.72227   AATACGTTTTAACCA        TTCAGGCGGAAG TTAG CTTCCGCCTGTT         TTACTTTTACTATCT  69 45
 STM474_4280 4327434 .. 4327447 -  -9.5  -5.93809   CCGCCAGAAAAAAAA               GCGCC GCAG GGCGC                TTTTTTTGTTTTCTA 100 38
        priA 4324743 .. 4324753 -  -2.6    -3.494   GAAGCGGTTACAGAA                 TTTT CAT AAAA                 AGTGTGATGGATCTT  48 72
        cytR NONE
        ftsN 4322483 .. 4322527 -  -2.2  -3.14132   CCCCTTGGTTACTAA TGCT-GAATTGCGGCCCCGTAC GGC GTACGGGG-CATAATGCAAGTA TAGATGGGGGAGATT  44 50
        hslV NONE
        hslU 4320541 .. 4320558 - -11.3  -5.07486   TAGCGCCAATAAAAA             TGGGGCT TTTC AGCCCCA              TCAACAGTGATGAAA 100 56
        menA 4319568 .. 4319582 -  -5.8  -3.08032   CTGTTGGCAAAATCA               TCAATT GTT AATTGA               TATTTGTCAGTTAAA  52 36
        menG NONE
 STM474_4271 4318439 .. 4318453 -  -8.5  -3.57309   GAAAATTGCTGCAAA               CCGCG ATCTA CGCGG               TATGTCGCTGGACAG  72 450
        glpF NONE
        glpK 4315733 .. 4315762 -  -9.3  -2.66602   GGAGGGAATAATTGA       TGTGTGTGCGGAG TTGC CTCCGCACAAAGA        TTTTGCCGGATGGCG  66 44
        glpX 4314617 .. 4314638 - -10.9  -2.74122   CGTCAGGAGAAAGAT           TTCCAGCCC CGCG AGGCTGGAA            GGCTCTAACTAACAA  74 46
         fpr 4313314 .. 4313330 -  -3.6  -3.65351   TTATTCTCATTTAAA              GGGCGT ATCGG ACGCCG              TGATTTCTGGATTTG  53 511
        yiiQ 4312510 .. 4312529 -  -5.6  -2.57354   CGAATTAAGGAAGAT            GGCCGCTC GTCA GAGCAGCA             TGGTCTGTGAAACAG  50 80
        tpiA 4311614 .. 4311628 -  -2.7   -4.0162   CCTCCACAGCATAAA               TGCCG GATGG CGGCT               TTACCTTATCAGGCC  56 101
        ydeW NONE
        lsrk NONE
 STM474_4253 4301580 .. 4301592 -  -6.3  -2.54276   ATCTTGAACCAACAG                GTCAT CAA ATGAC                AGCTTGATATTGCAT  53 114
        cpxR 4291178 .. 4291192 -  -2.8  -3.53091   ATGCGCGCGGTTAAA               CTTCCT ATC ATGAAG               CGGAAACCATCAGAT  48 18
        cpxA 4289787 .. 4289808 - -15.9  -5.36441   CGGCGAGATAAAAAA           TCGGCCTGC ATTC GCAGGCCGA            TGGTTTTTAGGTTCG 100 32
 STM474_4236 NONE
 STM474_4235 NONE
 STM474_4234 4284786 .. 4284798 -  -2.6  -3.28712   GCGTTGGCCGGATAA                GACG CGAAT CGCC                ATCCGGCAACGAGAT  46 59
        rhaT 4282292 .. 4282325 - -10.3  -3.55444   TGTTCACGCGGGAAA     CCGGGATGACGCC GAGCCAAT GGCGTCATCTCAG      TAATCAAAGCGATTA  77 38
        rhaB NONE
        rhaA 4277405 .. 4277456 - -13.8  -3.30243   ACGTAGGCCGGATAA GCGCAGCGCCATCCGGCAAT CGTGTTTCATTT ATTGCCGGATGGCGACGCGG GCGTCTTATCCGGCC 100 60
        rhaD 4276493 .. 4276504 -  -7.2  -3.80625   GCCGGATAAGGCAAA                GCCG CATC CGGC                 GTTGAGTTGGGAGGT  68 42
 STM474_4224 NONE
 STM474_4223 4274897 .. 4274933 -  -3.6  -5.49579   CGACAAAAAATAAAA   CCGTAGGCCCGGTAAGC TTGC GCC-ATCGGGCACACGA    CTTACTGCAGATAGA  86 27
 STM474_4221 NONE
 STM474_4220 4272931 .. 4272945 -  -8.5  -5.10208   TAACGCCAATAAAAA               GCGCC GATCA GGCGC               TTTTTTCGTTCATGT  91 295
 STM474_4218 4270458 .. 4270472 - -12.8  -5.26875   CTTCGAACGAAAAAA               GCGCCC CTG GGGCGC               TCTTTTGGCAGTCGC 100 99
        fdoG NONE
        fdoH NONE
        fdoI NONE
        fdhE 4263685 .. 4263711 -  -5.8  -2.79098   GTTATTGAGCAATGA         TCCGGCTAAC GTAGATT GCTAGCCGGT         ATACCAGAGAACTTA  50 38
 STM474_4210 4263012 .. 4263041 -  -3.7  -2.91695   TGTACTGTGAAACGA       TGATGCTATACGCC ATT GACGTATAG-ATTA       TTTTCACTACTATAA  46 35
 STM474_4209 4261862 .. 4261916 - -10.2  -3.96624   TAGTTCCATTACAAA GTTTTCAACCTGAAAACAATTTAGCG CAA CGTTATCCAGTTTTCAAGTTGAAAAC AAAATTGAATTTTAG  82 37
 STM474_4208 NONE
 STM474_4207 4260878 .. 4260892 -  -2.8  -3.62275   ACCCATTAGCGGAAA               GCCA AACGCCG TGGC               TGATTTGGGGTCGCT  51 221
        yihU NONE
        yihT NONE
        yihS NONE
        yihR NONE
        yihQ NONE
        yihP 4248646 .. 4248659 -  -9.5  -4.08064   AATCGCCTCTCAAAA               CGCCC CGCA GGGCG                TTATATTTTATTGTT  81 42
        yihO NONE
        ompL 4246394 .. 4246414 - -10.4  -2.80195   ATTCAGGATGAATGA            GCGGGCAG AACAA CTACCCGC            TGTGATGCTGATTCG  71 60
 STM474_4192 4245400 .. 4245453 -  -4.5  -3.22995   GTAATCACAATAAAT CCCTTTATCGTTGAGTAGGGGAATG TGCA CATTCCCCTACTCAATCACTCGGTG TACATCGCATTCATA  50 16
 STM474_4191 NONE
 STM474_4190 NONE
 STM474_4189 NONE
 STM474_4188 NONE
 STM474_4187 4240669 .. 4240695 -  -8.6  -4.87665   TCTTACGGATAAAAA         CCCTGCCGAAAT GAA AGCTCGGCGGGG         TTTTTTTATTCACGT  89 31
 STM474_4185 4236859 .. 4236876 - -11.3  -5.24129   TTGGTGGAGAAAAAA             GCCCATC CTGG GATGGGC              TGAAAGTTTCCACGG 100 187
        glnL NONE
        glnG 4234239 .. 4234262 -  -6.8  -3.93038   CATCGGAACAGTAAA          GCGCAAAA TAGCAGCG TTTTGCGC           TCAATTATTAATCTT  68 59
        ysxC 4230660 .. 4230671 -  -7.2   -2.5294   TAGGCCGGATAAGAC                GCGC AGCG GCGC                 CATCCGGCATAGCGG  57 45
        yihG 4226265 .. 4226289 - -14.3   -5.8096   GATAAAAAATAAAAA          GAACGCCGGTC ACT GACCGGCGTTT          TTATAAGATGTTTTA 100 10
        mobA NONE
        mobB 4223068 .. 4223112 - -13.6  -3.30124   CCGTAGGCCTGATAA GCGCAG-CGCCATCAGGCAAC CGGC ACTGCCGGATGGCGGCTCCGC CTTATCCGGCCTACA 100 36
        fadB NONE
        fadA 4209509 .. 4209527 - -13.1  -5.04385   CATACGGTGAAAAAA             CCCGCCC CTGAC GGGCGGG             AAAAACGGCAACTAA 100 181
        rfaH 4204329 .. 4204343 -  -4.2  -3.52204   TTACGCCGAAACCAA               CGTCAC GAC GCAACG               AGCCCGCGTATCTGC  52 152
        dlhH 4195242 .. 4195256 -  -2.8  -5.72118   AAAAAATATAAAAAA               TGCTGT GGT AAAGCA               TAGCTAACGTGGCGA  89 108
        metR 4189990 .. 4190012 -  -4.1  -2.72344   CTTTATGTGGAACTA          TGGCG-CTAC CCAG GTAGACGCCG           GGACGCTGGGTATCA  45 119
        rhtB 4186443 .. 4186460 -  -3.3  -3.28712   TTTTGTCGGCGATAA             CGTCGGCG CTG CGGCG-CG             CTGGGGTATTTTCGC  45 240
 STM474_4134 NONE
        rarD 4181546 .. 4181575 -  -4.9  -3.44051   TCGTTAGCATGACAA       TATGCTACCCCCC TTAC AAGGGGAGGCATA        TTTTTTCAGATTATA  56 59
        yigG NONE
        yigF 4180681 .. 4180716 - -14.8  -2.62175   CTGTAAGACATTAAG    GCCAGGGTGATTCAGC TGCG GCTGAACCACCCTGAA     AAGTTACAGGCTCCA  89 29
 STM474_4122 4172483 .. 4172501 -    -6  -3.29739   TGGAACCGATACGAA             TTACCGTT GTG AGCGGTAA             AGGATAAAACTCAGC  59 7
        cyaY 4171867 .. 4171881 -  -5.6  -4.95957   GAAATCAAGGAAAAA               CGTTGG TCA CCAGCG               TTACGTCAACTTTTT  80 237
        hemC NONE
        hemD NONE
        hemX 4164644 .. 4164672 -  -2.5  -4.36774   AAGCAACAACACAAA        GAGCAATAATACT TTT AGCATCATTATTC        TCCTTGCGGCGCGGC  60 20
        hemY 4163082 .. 4163098 -  -9.3  -4.16943   GGCGACACGCTAAAA              CCTCGCC AGC GGCGGGG              GGATGACAATCGCGT  82 395
        rhlB NONE
        gppA 4143301 .. 4143311 -  -6.8  -3.66178   CTGGCTAATCTGAAA                 GCCA TGA TGGC                 GGCAAAGCGAGCGAA  64 87
        ppiC NONE
        ilvY 4137798 .. 4137820 -  -4.8  -3.83771   AAGAAATGCAGCAAA           TTCACCATTG ATG CTCTGGTGAA           TATGCTTAGCCGTAT  58 77
        yifB 4128391 .. 4128403 -  -6.2  -5.15167   GATGATTAATAAAAA                GGGC GTAAT GCCC                TTTTTTTACGCCAAC  83 31
        yifA 4126997 .. 4127016 - -10.8  -4.06419   CCCTGCCAGAAATAA            TCCTTAGC ATCT GCTAAGGA             TTTTTTTTTGCCTAA  86 100
        yieP 4119941 .. 4119961 -  -6.2  -4.42748   CGACGCGAAAAATAA            CCAATTCA GATAG TGAACTGG            AGAGCGCGCAGGCCA  73 319
        yieN NONE
        yieM 4107480 .. 4107498 - -10.2  -2.71712   GCTGCGCGGCGAAAT             GCCGCAGA CCA TCGGCGGC             GGGATTGGGCAGTCG  66 144
        asnC NONE
        mioC 4105182 .. 4105197 -  -6.8  -3.92373   TAGCCGATGGAGAAA              GCCCCGG GAT CCGGG-C              TATTAAAAAGAAGAT  68 306
        gidA 4103133 .. 4103158 -  -8.9  -3.04089   TGTTAATAATCAAAT         GCCCGATGCGC TTTC GCTTATCGGGC          CTACAAATTTGTAGG  68 77
        gidB 4102408 .. 4102425 -  -3.4  -3.30038   CAGAGTTAAATGTAA             CAACGC TGAAAT GCGTTA              TACCTGTCGATTTTT  48 84
        atpI NONE
        atpB NONE
        atpE 4100372 .. 4100384 -  -3.3   -3.4052   TCTTAATTCAAGCAA                CGCTT ACT ACGCG                ACAGCGAACATCACG  48 19
        atpF NONE
        atpH NONE
        atpA NONE
        atpG 4096824 .. 4096834 -    -4  -3.73968   AAATCCTCTACGAAA                 TAAC CTG GTTA                 AACCGCGGCGGCCCC  55 23
        atpD NONE
        atpC 4094942 .. 4094961 -   -10  -6.26417   GAGGATAAAAAAAAA            CCAGTCCG CAAT CAGACTGG             TTTTATGCTTTCAAG 100 47
 STM474_4042 4094011 .. 4094030 - -11.4   -5.1417   TCAGAAAAGCAAAAA            CCAGCGAC AGAG GCCGCTGG             TTTTCCGTTGCGCGT 100 50
        glmU 4092285 .. 4092299 -  -5.6  -2.83271   TTATTTTTATAAGTA               CTGCTC ATG GAGCGG               AGGATTATTTTATCC  50 91
        glmS 4090305 .. 4090322 - -12.7    -5.626   CAGCGCACAAAAAAA             GGCCGTC TGTC GACGGCC              TTCTGCCTGGTACTA 100 50
        aroE NONE
 STM474_4037 4086060 .. 4086086 - -12.2  -5.96894   ATGGAAATAAAAAAA         GCTGGCCCGGGG AGA CACCAGACCAGC         CTGCAGGGGGAGATG 100 43
        pstS 4084782 .. 4084792 -  -3.2  -3.72695   ACTCTTTCCATTAAA                 CGCA TTT TACG                 ACGTTGCCCCTGCCG  53 130
        pstC NONE
        pstA 4082875 .. 4082900 -  -8.3  -3.10175   ACGCCGTAAAATAAT         GCCTGAT-GGCG CTA CGCTTATCAGGC         CTACAATGTCTTTAA  66 37
        pstB NONE
        phoU 4081303 .. 4081321 -  -3.1  -4.09685   CGCCACCGGGCAAAA             GAATGAG ATTTA CTCTTTC             GGATCTTTCCCCGCC  57 16
        yicO 4079014 .. 4079036 - -14.8  -4.58283   TAAGTTCGTTAAAAA           CCCTCCCCCC GAT GGGGCGAGGG           TTCATTTCATCAGTG 100 35
 STM474_4022 4070928 .. 4070954 - -13.1  -3.16742   GTGAACGTTCACTAA         CCCGCATTAAC TGCCT GTTAACGCGGG         TTTTTACTTTCCATA  91 435
        dnaA NONE
        dnaN 4063806 .. 4063821 -  -2.4  -2.75844   GCCGGGAGGCGAAAT              GGCAAG TAAA CCAGCC               CCTTTTCAGATTCTA  40 38
        recF NONE
        gyrB 4060127 .. 4060162 - -12.6  -2.77523   TGTCGATGAACATCA    TGATGCCCCGGCCAACC AGC GGTAGGCCGGGG-ATTA    AGGCAGGTTAAATAT  82 33
        yidA 4055467 .. 4055483 -  -9.4  -5.82281   AAAGACATAAAAAAA              CCCGCA GCAAG TGCGGG              TCGTTAAGCGAGTAT 100 62
        dgoR NONE
        dgoK NONE
        dgoA NONE
        dgoA 4051904 .. 4051914 -  -2.4  -2.82327   TTTTTATATTTAAAT                 TGGG TTG CCCG                 GAGGGCGACGTTTGT  40 60
        dgoT 4050353 .. 4050385 -  -6.1  -5.04601   CGCATAAATTAAAAA      GCGGCTGCGCCAGCC TGG GGATGACGCAGGCAA      CCGAAGCCTGTCGGG  84 167
        torT 4046418 .. 4046441 -  -3.9  -3.18681   CCTGAACGTGATGAA          TCACACGCTG GAGCA CAACG-GTGA          AGCCATTAAGCTTAC  47 230
        torC NONE
        torA NONE
        torD 4041394 .. 4041404 -  -3.2  -4.39414   AATACTAAATACAAA                 CCCA TCA TGGA                 TATTGATTGGTATCA  62 121
 STM474_3997 NONE
        ccmA 4039292 .. 4039311 -  -6.3  -2.86177   ACACGCCACATCACA            GCCCGGC CCCCCC GCCGGTC             AGCGCCAGGCGGCGG  55 1
        ccmB 4038612 .. 4038638 -  -2.9  -4.39386   CTGAAACCAGTAAAA        TGTCCGTCGCGC CGGG GCGCTACTG-CA         CGCTGAGGCGCAGCG  60 18
        ccmC 4037836 .. 4037848 -  -6.2  -2.50493   TCCACGATGAAAATG                CCGG ACTCA CCGG                TGCCCCCTTTTCAGT  53 19
        ccmD NONE
        ccmE NONE
        ccmF NONE
        ccmG NONE
        ccmH 4033531 .. 4033543 -  -7.7  -3.21593   GATGTCCTGATAAGA                GACGA TGC TCGTC                ATCATACTGCACACG  64 117
        yidR 4032105 .. 4032116 -  -2.2  -4.11235   TAACGATGAGACAAA                CTGG GGCA CCAA                 ATCGTTGGCCATCCT  56 196
 STM474_3986 4031653 .. 4031669 -    -3  -4.10612   ACGCATAATCATAAA             CTC-CTG AAAT CAGCGAG              AATGTCAGACCTTCC  56 263
        ibpA 4031205 .. 4031221 - -11.5  -2.80113   GAGCATGGGATGACA              GGCCGCG CAA CGCGACC              CGACGGAATCAGTTA  77 34
        ibpB 4030655 .. 4030676 - -17.3  -5.60993   CGTGGCATAAAAAAA           GCCCCGCCA TCTC TGGCGGGGC            AAGGCAAGGAGCTCA 100 41
        yidE 4028828 .. 4028841 -  -9.5  -2.66274   GGCCGGATAAGCAAC               GCGCC ATCA GGCGC                TAACCCATTCCCCAA  68 25
 STM474_3981 NONE
        yidH NONE
        yidG NONE
        yidF 4027112 .. 4027152 - -11.9  -3.35046   TCAGTGCCGGAAAGA CGGCAGCGCCATCCGGCA CGCCAT CGCCTGATGGCGCTAC-G  CTTATCAGGCCTGTG  85 44
        dsdC NONE
 STM474_3974 4021607 .. 4021624 -  -5.5  -4.42386   TCGCCAGCTATAAAA             CGCTGTT TGGT AACGGCG              CATTTAACTGTTACC  70 515
        ivbL 4018974 .. 4018998 - -10.7  -5.63517   GTCTTAAACAAAAAA         CCCCGCCCGG TTTGCG CCG-GCGGGG          TTTTGGAATCGTGTG 100 52
        ilvB NONE
        ilvN 4016663 .. 4016693 -  -5.4  -2.73159   TCAATCCGCGCAAAG       TGTTTATTTCCGCC AGC GGCGTACATGAACA       TTTTGGCGTGAGCTG  47 268
 STM474_3967 NONE
 STM474_3966 NONE
 STM474_3965 NONE
        uhpA NONE
        uhpB 4010375 .. 4010387 -  -5.5  -3.27525   CTTCCTTAAACGTAA                CGCTG GGG CAACG                AGACGCTCACCCGCG  54 3
        uhpC 4008949 .. 4008974 -  -2.5  -4.37534   AAATCCACAGGAAAA         GTGGCCTGCGAC AGC GTC-CAGGCAAA         ACCGGGAAAATTTCT  60 78
        uhpT 4007451 .. 4007469 - -13.1  -4.91712   CGCAAGGCATAAAAA             GCCCGGC GTTAA GCCGGGC             AAAACGTTACCAAAT 100 49
        yicN 4006621 .. 4006648 - -12.9  -2.94356   TTCAAAACAAGATCA        CATTTCCGTGA TATATG TCACGGAAATG         ATGAGCTATAAGTCT  86 226
 STM474_3959 NONE
 STM474_3958 NONE
 STM474_3957 4004979 .. 4004991 -  -3.3   -2.8552   TTTTATTTATGAAAT                CAGGC TTG GCCTT                TAAGGATTGAAACTA  44 12
 STM474_3956 NONE
 STM474_3955 NONE
        gatY NONE
 STM474_3953 4000469 .. 4000489 -  -9.1  -4.35327   TCAGCAAAAACTAAA            TTCAAAAGC CCT GCCTTTGAA            CCGATTCATAGCGCG  84 401
 STM474_3947 3993830 .. 3993856 - -11.5   -2.5638   GAGGAAGAAGAAAGG         TCTGGCGAGGC GCGAA GCCCCGCCAGT         AAAAGGATTAACTAT  77 33
 STM474_3946 NONE
 STM474_3945 NONE
 STM474_3944 NONE
 STM474_3943 NONE
 STM474_3942 NONE
 STM474_3941 3988969 .. 3988992 -  -8.8  -2.78049   ATTCAGGAAAATTTA          CCCCTGCGAG GAGG CTCGAAAGGG           AATCACTGACGGCTG  64 162
 STM474_3940 3987632 .. 3987642 -  -6.8  -3.62054   ACGCTAAAGAAGGAA                 CGCA CTT TGCG                 GTGAGCGGCAGCCTG  62 335
        mgtC NONE
        mgtB 3982579 .. 3982631 -  -2.8  -3.76811   GATACCATGAAAATA GCGCCCCGCC-ATAAAAAGAA-CAAC TAC ATCGATTCTTATTTTAAGCGGGGCTC GCCAACAGCAGCTTA  52 251
        cigR 3981857 .. 3981877 - -14.1  -3.66803   CCTGAAGAGGCTAAA            TAGCCCCAT TTA ATGGGGCTA            TTTTACTTGCCATTT 100 211
        marT NONE
        fidL 3978960 .. 3978978 - -14.6  -3.27902   TCAGGTAACAACAGA             GCCGCTGA TCT TCAGCGGC             TTTTACCCGGAAACG 100 85
 STM474_3927 3969860 .. 3969894 -    -5  -3.39862   AGGAAGTAGCTATAA    TGCGCGCGCCTCCAT GTAGCA ATCGAGGCGCG-GAA     GATCGTCGTCTCCGG  54 433
        yicJ NONE
        yicI 3965858 .. 3965873 -    -6  -3.30124   TTGTAGGCCGGATAA              GCGCAG CTCA CGGCGC               CATCCGGCGATTCAG  59 43
        gltS NONE
 STM474_3919 3960227 .. 3960241 -  -7.1  -3.38768   CCACAGCAGGCACAA               GCGCT GATTG AGCGC               TGGATGCCGGAAACC  58 64
        ligA 3952178 .. 3952192 -  -5.6  -2.87211   ATTGGCGCTCAGATA               GCCCTT GAT ATGGGC               GAAGGGCCAATTATC  49 304
 STM474_3910 3949541 .. 3949559 -  -2.4  -5.45652   ATTCTGAAGAAAAAA            GA-GGCG GTAGGT CGCCGTC             TGGACTTCATGATGC  85 215
         rph 3947970 .. 3947987 - -11.3  -5.96219   TACGGACAAAAAAAA             GGCGACT TTTC AGTCGCC              TTAAAATCAATTTTC 100 32
        pyrE 3946848 .. 3946875 -    -4  -5.69023   AAAAGATGAAAAAAA        CACCAGCACGCG TTTG CGCCTGATTGTG         TTGCTGATTCTGGGT  91 424
        radC 3943969 .. 3943982 -  -6.7   -4.2074   TCCCGAACAGACAAA               GATCC CGAT GGATC                GCGCAAAGAATCTTA  72 38
        rpmB NONE
        rpmG 3943314 .. 3943329 -  -8.2  -5.86976   CCAGAAAACAAAAAA              CCCCGC CGAA GCGAGG               TTTTTGTTACATCAA 100 49
        mutM 3942068 .. 3942094 -  -3.6   -4.2461   AGCCCCAGCAAGAAA         CCCATGTTCACC CTG GACGAACGTGTG         GCGCTGGCGCAAAAA  64 377
        rfaQ NONE
        rfaG NONE
        rfaP 3937235 .. 3937253 -  -2.4  -3.91897   TGTCTCACTCATAAA             TTACTCAC TGA GTGCATAA             TTATTATAATTACAG  53 35
        yibR 3936948 .. 3936960 -  -2.7  -4.23758   ACCCCAGAGTTAAAA                CCTTA ATC TAAAG                ACTTTAGATATTAAA  58 63
        rfab NONE
        rfaI NONE
        rfaJ 3933817 .. 3933827 -  -2.6  -3.05046   TTATTTGTGGAAAAG                 TTTA CGA TAAA                 GATATGCGCTTCCAG  43 0
        rfaY 3932971 .. 3932985 -  -2.9  -3.34369   AACCTATAAATAAAT               GTTAT ATTCA ATAAC               TAATATTACATCTCA  46 121
        rfaZ 3932004 .. 3932022 -  -4.7  -3.95424   AGGAGTAACAGTAAA             TATGATT TTTTT AATCATA             ATAGCTATAATCCAG  59 125
        rfaK 3930825 .. 3930854 - -13.7  -5.82281   AAATAGATAAAAAAA       CGCGCTGATAC TTATTACG GTATCAGCGCG        TTTTCCATCATCAGG 100 47
         kbl NONE
         tdh 3923921 .. 3923941 -    -9   -5.4505   TTCCCTAACAAAAAA            GGTTGGCG AATGA CACCAACC            TTTTACGATGAAACG 100 281
        yibD 3922536 .. 3922548 -  -3.3  -5.09426   TGCAAGCCGAAAAAA                CCGCT GCA ACCGG                TCTACGCTACGCGCT  76 146
 STM474_3876 3918193 .. 3918211 -  -3.9  -3.13504   GCGTCATGAAAACGA            CG-GGTAA TCAC TTACCGCG             CACCAGAGGCAGATT  48 14
        grxC NONE
        secB NONE
        gpsA 3916279 .. 3916308 - -10.1  -4.39426   CAGACGGGCAGAAAA       CGA-CCAACCCG TTCTGTG CGGGTTGGGTCG       TTTATGCAAACAGTT  87 49
        cysE 3914953 .. 3914976 -    -3   -3.6502   GACTGGCTACTCAAA          CGCGGCTATA GCCT TACCGTCGCG           CGGAAATTGCCTGTT  50 482
 STM474_3869 NONE
 STM474_3868 3911149 .. 3911162 -  -5.9  -3.96148   TGCGTTGACGACAAA               GGGCA CGCC CGCCC                ATAGCGCCGTAAGCT  65 211
 STM474_3860 3900071 .. 3900081 -  -4.6  -3.34398   GGTGTTTCGCAAAGA                 CGAC TAT GCCG                 TGAAATACGCTGTGG  51 409
        yibf NONE
        selA NONE
        selB 3892078 .. 3892104 -    -8  -5.69262   CCAGAAAAATAAAAA         GCACATCTGG TTCATTT CCTGATGTGC         TTTTTATAAAGCAAC 100 83
        aldB 3889026 .. 3889040 -  -4.2  -4.00526   AAGGCGAGAAGCAAA               GCGC CCCAGAT GCGC               AGCATCAGGCGTTGT  60 274
 STM474_3850 3886083 .. 3886094 -  -2.2   -3.9941   GGCCCGATAAGCAAA                GCGCC ATC GG-GC                ATTCAGTTTGCAACC  53 68
        yiaJ 3875889 .. 3875910 -  -4.5  -4.02534   ACGCAAACGGACAAA           TTTTGTCAG ATGC CTGATAAAA            CCTGGCGAGCTGTCT  61 40
        ysaA 3875258 .. 3875268 -    -4  -4.56775   AGGCGGGCGTAAAAA                 TTCT GGC AGAA                 GAGATAGAACGCGCC  69 92
         bax 3870664 .. 3870706 -  -7.1  -2.89881   TATCCAGCCTACAGA TGCCTTGTAAGCCGGATAGCG TAG CGCCATCCGGCACACA-GA-A TTACATATGCGCGGC  59 26
        xylA 3867740 .. 3867752 -  -2.6  -2.71364   TTACCGGGCTAATCA                CGAC TACAG GCCG                GGCTAACGCGGAGTC  41 56
        xylB 3866196 .. 3866221 - -12.7  -3.61922   AATATTTACGGGAAA         TGCCTTTCAGC CAAA ACTGAAAGGCA          TTCTGACTTATGACA  95 33
        yiaB 3865686 .. 3865703 -  -9.9  -3.61609   TTAGCTAAACGACAA             TGATGGC TCCG GCCATCA              TTCATCATCACTGTA  77 23
 STM474_3829 3864175 .. 3864191 -  -5.1  -3.10597   TTGTTTAGCGAAAAT              TGCCG GATTTCG CGGCA              TCACACCTCACCAGG  51 49
        glyQ NONE
        glyS 3861047 .. 3861062 -  -6.8    -5.626   TATGTTATAAAAAAA              CCTGCC CGAG AGCAGG               TTTTTGTTTATTTAA 100 49
 STM474_3825 3859953 .. 3859999 -  -2.4  -3.65522   TACTGAGTTCAACAA GGCAAAAGAACAATGCTGCCT TTCTGC AGGCTG-ACTATTATTTCGCC AAACATTTCCTCATC  49 16
 STM474_3824 NONE
 STM474_3823 3858686 .. 3858714 -  -8.9  -5.44721   ATTACGTTAAAAAAA        TGCCCGATAAC ATAATGG GTTATCGGGCC        TATAAAACGCCAACA 100 363
        yiaF 3855684 .. 3855713 -  -6.4   -3.9941   TTTGCCAGAATGAAA       TCGTCCGCCATT TTTATT AATGCCGGACGC        GGCCCGGTGGTCGAT  65 339
        bisC 3851407 .. 3851430 -  -2.5  -3.81741   AATGGACAACTGAAA         GGCTTCGTCAG CGTA CTG--GAAGCC          CGTTTTGTCGGGGCG  52 231
        yhjY 3849608 .. 3849626 -  -5.9  -6.23545   GCTAAATAAAAAAAA             GGGCACC AAATG GGTGCGC             TGTACGCCTGGTGTT 100 206
        lpfA 3848712 .. 3848734 - -13.5  -5.00616   CTCCGCTGGAAAAAA           TGGCAACGG GATTT CCGTTGCCA           TTATGATTGTCTGTA 100 56
        lpfB 3847978 .. 3847993 -  -3.2  -4.12599   AATAATCCTTTAAAA              CGTGTT AGTT AACGCG               CTGTGTCAACATGTC  57 14
        lpfC 3844929 .. 3844942 -  -4.5  -3.42241   AATATAGAGCGATAA               GTGAC CTTT GCCAC                CGGATGTCCATATTG  52 514
        lpfE 3843786 .. 3843803 - -12.7  -4.49644   ACTAAAAATGGAAAA             GGGCCAG CGAA CTGGCCC              TCAGTGATTATTCGT 100 33
        yhjW 3841706 .. 3841724 - -14.6  -5.76633   TCAGATACAAAAAAA             CCCTGCTC ATT GAGCAGGG             TTTCTGAATTTGGTC 100 203
 STM474_3804 3839265 .. 3839290 - -11.1  -5.69023   AAAACATCAAAAAAA         TAACCGCCAGC GCGG GCTGGCGGTCT          GTATTATTTCAACCA 100 29
 STM474_3803 3837876 .. 3837896 - -12.6  -4.00411   CAAAATTGTAAATAA            GTAGGCCG TCGTG CGGCCTAC            CGCGATCACAAAAAC 100 40
        dppA 3835683 .. 3835706 -  -2.2  -3.86897   TGCATCGCGGATAAA          GCATTACGCC GGAT GGCGCTGCGC           TTATCCGGCCTACAC  53 67
        dppB NONE
        dppC NONE
        dppD NONE
        dppF 3831626 .. 3831637 -  -7.2  -3.30124   GTGTAGGCTTGATAA                GGCG CAGC CGCC                 ATCCGGCATAAAACG  63 44
        ldrd 3829427 .. 3829466 - -18.6  -3.73775   CTTACCCGCAGTAAA  CCGAAAAAGGCCGCAAGG TTTC CCCTGCGGCCTGGTTCGG   GCGCATGTTGCCATT 100 66
        yhjR 3825536 .. 3825549 -  -2.3  -2.58544   CTGCAGTCCCAGAAT               CGCCA TTCA TGGCT                TCCTTAATGAATGTG  39 18
        yhjQ 3824769 .. 3824811 -  -5.3  -2.57463   AACCGGCGGGATAAG CAGCCACCGGGAAAGGGCG CTCAT CGCAGGCTCCCGGCGGACG TTTTGTCGCCCGCAT  48 3
        bcsA NONE
        yhjN NONE
 STM474_3786 NONE
        yhjL 3815155 .. 3815168 -  -3.7  -2.91199   TAACGGTTAATGATA               GCGTC TGAT GGCGC                TGCGCTTCTCAGGCC  46 77
        yhjK NONE
        dctA 3811556 .. 3811581 - -12.6  -3.37259   AATTATGCGCAAACA         CCCGCAGTCC TGGAAG GGACTACGGG          CATAAGTGGCGAGAT  90 40
        yhjJ 3809671 .. 3809684 -  -3.1  -4.32857   CTGCCGAAAGAGAAA               GTGAT AGAC ACCAC                TGCCGCAGGCGACTC  62 230
        yhjH 3807863 .. 3807908 -  -2.5  -3.30658   CCAGACGAAAAAGGA GGATGACCGCGCCTCGTAATAC CAC GTATTACG-GGAACAGTCTGGC GTTACAGGGTCAGAA  46 27
 STM474_3779 3805703 .. 3805730 - -11.2  -3.02144   TCAGGCGTTGTAATA        GGGCGCCGGATG GCAT CATCCGGCGCTA         CGTTTCACGTTACTG  79 35
        yhjB 3800483 .. 3800503 -  -5.3  -3.72695   ATCGCGTTTATTAAA            CAGTGGCAG GGT CTGTCGCTG            GAAAAGTATCGCGAT  58 316
 STM474_3772 3798350 .. 3798374 -  -7.1  -2.79183   GGTATGGCGACGATA          TGCTGGGCGAT GAA ATCGCCCATAA          CTGGTTAAAAACAGT  52 213
 STM474_3770 3795797 .. 3795821 - -11.5  -6.02546   GGAAACCAAAAAAAA          TCGGGATCC GCGATCT GGATCCCGA          TTCAGCCTGCTCTTC 100 59
 STM474_3769 NONE
 STM474_3768 NONE
 STM474_3767 NONE
 STM474_3766 3791274 .. 3791309 - -13.3  -3.03441   GACCATGCGTTAATA    TCTTGTGCGCCCATC TTCAAG GGTGGGCGCACAAGC     CTGCATGATTAATAC  86 34
 STM474_3763 3787453 .. 3787484 - -10.3  -3.01712   GCCGCCCCTTTAACA      TCATCCCGGCTTAC GTTTT ATAAGCCGGG-TGA      CAACGTCAGCGCGTT  73 31
        prlC 3785248 .. 3785270 -    -2  -3.18264   CGTTTCATCCATTAA           GCAGATTT GCACGTA AAATCAGC           CTTTAATCCCGTAAT  44 21
        yhiQ 3784464 .. 3784500 -    -3   -2.6924   CAAATAATTGAGAAT   CGTA-GGCCCGAT-AAGC GTA GCTCCATCGGGCAATCCG   TTACTCCGTCAGAGG  41 26
        uspB 3781323 .. 3781353 - -11.9   -2.8585   TTATTTAAGCCAAAT      GGGCCGGA-TAGCG CTGT CGCTAATCCGGCCT       GTCAGGATGAAACGA  80 127
        yhiN 3778134 .. 3778157 -  -5.8  -2.91395   ATGCGTGTCACAAAG          TCCGCCGGGC GTGC GCTCAGCGGG           GGTTTCCATTCGGGA  51 260
 STM474_3754 NONE
 STM474_3753 NONE
        yhhJ 3773068 .. 3773078 -  -8.2  -3.50555   CCGAAAGAAGACTAA                 CGCC GGG GGCG                 CTTCGCTTGCCCGGC  67 104
 STM474_3748 3769063 .. 3769085 -  -8.3   -4.6391   AACAACGATACAAAA           GCGTCGGCA GAAAG CGCCGCCGC           GGAAAGCCAGGCATC  87 486
        yhhP 3767721 .. 3767735 -  -7.1   -3.5511   CCGCATCCAGAAACA               GCCTC GTCGG GAGGC               GTCGCCAACGACGTT  60 122
        yhhM 3762155 .. 3762168 -  -3.7   -4.1196   AAGCGAGGTGGAAAA               CGGTC TGCC GCCCG                TTCCGGCGAACTGGG  60 404
        ftsY NONE
        ftsE NONE
        ftsX 3758290 .. 3758306 -    -8  -3.68024   GCGGGGAAGAGACAA              CAGGGA CTCTT TCCCTG              CGAACGGAAGCCCAT  69 69
        rpoH 3757207 .. 3757228 - -10.9  -5.49579   CTACAAAAAACAAAA           CCCCCGAAT TCAC ATTCGAGGG            TTCATTGGCAATTCG 100 47
        livJ 3755637 .. 3755663 -  -8.7  -4.66535   AAGCGCTAAAAGAAA        GCCGGAT-GGCG CTGA CGCTTATCCGGC         CTACATGCCGGGAGA  89 187
        livK 3753675 .. 3753693 - -13.1  -2.73159   GTAACCTTTTTAAAC             CCGCCCG GCGTG CGGGCGG             TGGGATAACTTATCT  85 48
        livH NONE
        livM 3751449 .. 3751462 -  -3.1  -2.78867   TTAACCGCTAATAAT               GGC-TG ACT CATGCC               TGCTCTCCTTTCGCC  43 19
        livG NONE
        livF 3749899 .. 3749912 -  -8.1  -5.65177   ACATGTACAAAAAAA               GAGCC ATCA GGCTC                TTTTGAAAAATTTTA 100 90
        yhhV NONE
 STM474_3725 3749089 .. 3749115 -  -2.4  -5.04175   CGAATGACAGAAAAA         TAACTTTTTTAT TAC AAAAAAAAGATA         GTAAGGCGACAGAGA  71 169
        ugpB NONE
        ugpA NONE
        ugpE NONE
        ugpC NONE
        ugpQ 3744023 .. 3744049 -  -9.4  -2.82516   TGTTGCAGCAGGACA         GCGGGACGCC GCAGCCT GACATCCCGC         TGAAAACCATCAGCC  69 58
         ggt 3741751 .. 3741771 - -16.9  -3.39028   CATAATCTGCAAATA            GCCCGGTGT CTG ACACCGGGC            CTGGAATTAAAAATC 100 39
 STM474_3713 3737429 .. 3737460 -  -5.8  -3.90744   GCGCGCGTGAAATAA      CGCTTCCCCGCCCCA CCC TGTGG-GGCGAAACG      TCACAAACCTTCACA  63 74
        yhhX NONE
        yhhW 3734562 .. 3734594 -  -4.8  -4.40993   GACAAACGATGAAAA     GCCGGATGGCAACGC TTTC GCGTCTT-ATCCGGC      CTACAAAAGGTTACA  68 46
        gntR 3733353 .. 3733364 -  -3.6  -3.53444   TTAGTCGTGCTCAAA                GCGG GCCC CCAC                 TCTACAAGTTGCAAA  50 151
 STM474_3708 NONE
        gntU 3731391 .. 3731416 -  -6.2  -5.80364   ACCTCAATAAAAAAA        CCGGGT-A-GCG ATTA CGCCTTACCCGG         CTTACGGTGTCGATA 100 90
         asd 3729838 .. 3729853 -  -6.1  -5.48825   TATTACGCAAAAAAA              GGGTG ACGATG CACCC               CTGGTTTAACACAAA 100 123
        glgB NONE
        glgX NONE
        glgC NONE
        glgA NONE
        glgP 3720199 .. 3720216 - -14.1  -5.32882   TACCACGATAAAAAA             CGGGGCC GTTT GGCCCCG              TTCTCAAGCGTTAAA 100 44
 STM474_3700 3719271 .. 3719287 - -10.8  -3.80461   TAAGCGATGACGAAA              GCGGGC TTCTT GCCCGC              TATGTCTTTTTATTT  85 40
        gldA 3713762 .. 3713795 -  -5.9  -2.84103   AAAACATTCACGATA     GCGGCAGACAGAAGT TGAA AGTTCCGGCTGCCGT      TTTTTATTTACAGGC  51 46
 STM474_3695 NONE
 STM474_3694 3711567 .. 3711577 -  -2.4  -4.63218   GGCGTCGTAATAAAA                 TCCG GGG CGGT                 TTATACCGCCCTTTT  64 56
        glpE NONE
        glpG 3708596 .. 3708617 -  -5.9  -4.56597   CCCGGCCTGGAAAAA           TATCTCGACC ACA GGCCG-GATA           CGCCTCACGTTCGTT  72 30
        glpR 3707366 .. 3707376 -  -8.2   -3.1855   CGTTTTAATACCGAA                 GCGC GCC GCGC                 CTGGCTGAGCTTCGC  62 419
 STM474_3688 3704256 .. 3704266 -  -6.8  -3.25072   GGCACGACAAGTTAA                 GGTG AAT CACC                 CGCTCTACCGTTGAG  59 206
        rtcB NONE
        rtcA 3701793 .. 3701812 -  -2.8  -2.78934   CTATACAGTTCAAAT            TGTAGCTC AACT GAGACACA             CATACAAACCGGGCC  41 75
 STM474_3685 NONE
 STM474_3684 3701135 .. 3701148 -  -3.8  -4.18018   GGGTTTGAGGCAAAA               CAGG CAACGT CCTG                GTGTGTAAATTTGTT  62 92
        malP NONE
        malQ 3693318 .. 3693349 - -20.4  -3.01924   TACGTGCTCTCAACA      TAATAAAGCCGGGG AAAT CCCCGGCTTTATTA       TTTCTTCTTCGCGGC 100 23
        bioH 3689106 .. 3689135 -  -7.1  -2.90075   GTTTGTTTAATTACA       TGATGCACACTGGC GAC GCC-GCGCGCTTCA       ATACGTTTATCCGCC  53 300
        ompR 3681086 .. 3681133 -  -4.8  -3.18023   TGACGATGAGCAACA GCGTGCGGGCAAATGAACTTCGC GGT GAGAAGCGCATTCGC-CTCATGC TTTAGAACCGTCCGG  52 20
        envZ 3679753 .. 3679778 - -13.4  -3.28791   ATCCGGCGTTGAGAA         GAAAGGGAGG GTAATA CCTCCCTTTC          TTATGCCTCTTTTGT  95 26
        yhgE 3675967 .. 3675978 -  -5.8  -3.30124   CCGTAGGCCGGATAA                GGCA TTTA TGCC                 GCCATCCGGCAAAAA  56 43
        nudE 3670733 .. 3670746 -  -9.5  -5.14563   GTTCTGATCAAAAAA               GGCGC TCCG GCGCC                TTTTTTATTGTGTTT  93 99
        yrfD NONE
        yrfC 3666740 .. 3666753 -  -3.7  -3.53419   ACCAGATATCAAAGA               GCGCG TTCA CGGGC                GGCGCTCCTCGTTAA  52 5
        yrfB NONE
        yrfA NONE
        hofQ 3664603 .. 3664618 -  -7.6  -2.84878   TTCGGCAAGGCAAAG              CGCATT AATC AATGCG               TAAGCAACGAAAAGC  59 139
        aroK NONE
        aroB 3662563 .. 3662583 -  -2.6  -5.15969   CCTGAAGCTAAAAAA            CTGACATC TACGC AATATCAG            TTTGACCTTTCTTGT  73 43
        damX 3661064 .. 3661085 -  -6.6  -2.97613   GACTAACTAATTACA           CCTTCTCC GGCTGT GGAGAAAG            CTCCGACAGCATCCT  56 166
         dam NONE
         rpe NONE
         gph NONE
        trpS 3657650 .. 3657664 - -11.4  -5.76633   GCAGATACAAAAAAA               CCGGGA TTT TCCCGG               TTTTTTTACAGGTCT 100 127
      tnpA_2 3656578 .. 3656598 - -12.5  -3.76167   TAACACTAATAAATA            TCCTCCGGC ATA GCCGGAGGT            TTTTCAGATGCGCCT 100 106
        ppia 3642674 .. 3642694 - -11.8  -4.46155   GAGACAGGGAGAAAA            CGCGGGCG GCTCG CACCCGCG            CAGGCATGTTTTATG 100 36
        yhfg NONE
         fic NONE
        pabA 3641200 .. 3641212 -  -2.7  -3.61609   CCAGTGAAATTATAA                TCACA AAA TATGA                ATAAAAAATCACTCA  50 55
        argD 3639899 .. 3639935 -  -9.3  -3.16437   TACAAAAGGTTAAGA    CCGACCGCCGGATGCGC TAC GCTTATCCGGCAATCCG    CCATCAGGCCACCAC  70 29
        yhfA 3636333 .. 3636358 -  -9.7  -2.72461   TAACCGCGGTGAAAT         GCCCGAT-GGCG CTA CGCTTATCGGGC         CTACGAGATAAAAAC  69 83
        ydhR 3633558 .. 3633576 -    -3  -3.85698   TCGCCCCGGTATAAA             GATTACCG TTG CGGTCAGC             AGCACCGGAACAGAA  54 57
        kefG NONE
        kefB NONE
        yheV NONE
        slyD 3627621 .. 3627635 -  -8.5  -5.58454   TTGAGACGAAAAAAA               GCGGG GTTAA CCCGC               TTTTTTTGTGCCCGA 100 187
        fkpA 3626321 .. 3626342 -   -13  -6.09888   CCTGAATAAAAAAAA           CCGCCGCT ATTACA AGCGGCGG            CTCTCAGTTTTTATT 100 36
        yheO NONE
        yheN 3624962 .. 3624974 -  -2.7  -2.53748   AGACAAATGCAATAC                GTTTC ATT AAAAC                TGCACCACCCGATCG  40 19
        yheM NONE
        yheL 3624239 .. 3624261 - -10.6   -4.7268   AAACACGTAATAAAA           CGCCCTCACA CAA TATGAGGACG           CCGAATTTTAGGGCG  95 81
        rpsL NONE
        rpsG 3623202 .. 3623225 -  -8.9  -4.21275   TTAAGTTATCCAAAA          CGGGCGACTT ACCTG AAG-CGCCCG          CCTGGTGACTATGAC  82 51
        fusA 3620988 .. 3621013 - -13.3  -2.78935   ATATTCCTTACTATA         GCGCTCTCCCC TTCA GGAGAGAGCAC          GGGATTTTGGTTTTT  85 52
         tuf 3619739 .. 3619754 - -11.8  -5.11063   AGCAGGCAACAAAAA              GGGCGC CGAA GCGCCC               TCTTCAATTCAAAAC 100 55
         bfd 3619396 .. 3619406 -  -5.4  -5.78622   GGATGTCAAAAAAAA                 GAGT GTG ACTC                 AGGCGATCTCTTTAA 100 24
         bfr 3618831 .. 3618853 -  -5.7  -2.52623   CGGGTTTCATAACAG          GT-TGGAAAG TTTT CTTTCCAGAC           GGTTAATCGGTAACC  49 28
        rpsJ NONE
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ 3613008 .. 3613033 - -12.7    -5.252   TATGGGTAGAAAAAA         TAAACGGCCCA TCGC TGAGCCGTTTA          TTCGTTGAGAATGCG 100 48
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF NONE
        rplR 3609993 .. 3610003 -  -3.2  -3.32963   ACCTCTACCTTAGAA                 CTGA AGG CCAG                 CTTCACGGGCAGCAT  48 9
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY NONE
        rpmJ 3607302 .. 3607331 - -12.3   -4.6645   TACAGACATACAAAA       GATTG-GCTGGCTA ATC TAGCCAGCTCAACC       CAACTTTGCAAGAAA 100 55
        rpsM NONE
        rpsK 3606445 .. 3606463 -  -4.4  -4.15508   AACTAACCTGGAAAA             CGAAGCGT TAT ACGCGACG             TTTTTTCGGCGGACG  64 14
        rpsD 3605795 .. 3605813 - -10.4  -3.14132   TCTCTTTGGTACTAA             GCTTTACT TGG AGTAAAGC             TCGACGATCAGGTGT  74 10
        rpoA NONE
        rplQ 3604325 .. 3604338 -  -9.5    -5.626   GAGGGTATAAAAAAA               CCCGC CGAA GCGGG                TTTTTTTACGTTACT 100 46
        yhdN NONE
        zntR 3603415 .. 3603436 -  -5.8  -3.61244   GATTGTATAAATTAA           CGGCGCGAG TGTAG CCC-CGCCG           GTTCAATAAATCAAT  59 36
 STM474_3576 3603089 .. 3603123 -  -2.1  -5.09426   CTCAACCGTAAAAAA    GCAGAAGA-GCCGGCA GCTC CGCCAGCGCCTTCTAA     AGAGGAAGTGTTATT  74 22
        dprA NONE
         smg NONE
        yrdD NONE
        yrdC NONE
        aroE NONE
        yrdB 3594408 .. 3594432 -  -4.1  -4.08767   GGCAGTCCGGTAAAA          CAGATCCGCCC CTT GAGCGATGCTG          AGAGATCGGGCCTGC  60 87
 STM474_3552 NONE
        envR 3581262 .. 3581279 -  -4.1  -3.63968   GGCGAAAGCGTTAAA             TCTGCAA ATTG TGGCAGA              AGGGGTAGAGAATGA  53 194
        yhdA 3566113 .. 3566140 -  -5.6  -3.85698   TTCCTTTGTTACAAA        TCTCGGC-CTGAG TCC CTCAGGGCTGAAA        AAATCAGCAGCAATC  61 172
        mreB 3564939 .. 3564953 -  -2.8  -2.75064   GCCCGTATCCAACTA               CTCTTC GCT GAACAG               GTCGCCGCCGTGCAT  41 8
        mreC NONE
        mreD NONE
         maf NONE
        cafA NONE
        yhdP NONE
        tldD 3555542 .. 3555555 -  -5.3  -3.96999   GTACACCGAAAAAGA               TAAGC TGCC GCTTA                AAGTGCAGGTAGTGA  63 240
 STM474_3527 3554600 .. 3554612 -  -2.6  -2.68942   ATCGCCGCAGAGAAG                GGCA AGAGA CGCC                AGGCGAGAGCGACAT  40 103
        aaeX NONE
        yhcQ NONE
        yhcP 3551391 .. 3551409 -  -8.1  -5.65177   ATAGTCATAAAAAAA             CCGACGC TTTTG GCATCGG             TTCTTGTGGGTTAGC 100 36
        yhcO 3550742 .. 3550758 -  -4.3  -3.06261   GGTCAACGCGGAACA              GGCGCAG AAT CTGCAAC              CGATGGGCACCATTT  47 243
         mdh 3548060 .. 3548079 - -12.8  -3.98913   TTTACAGTCAAAGAA            GCCGGAGC AAAA GCCCCGGC             ATCGGGCAGGAACAG 100 42
 STM474_3518 NONE
 STM474_3517 NONE
 STM474_3516 3545206 .. 3545224 -  -4.5   -2.5474   CCTTAGTCAGAACAG             CTTCCGT TAATT ACGGATG             AAAAGGGAAAAGGAT  46 17
 STM474_3515 3544292 .. 3544305 -  -2.4  -2.98447   TTAGTCATCAGAAAT               TCAC TCCGCT GTGA                GACGTAATGGTGTAA  41 4
 STM474_3514 3543518 .. 3543534 -  -3.6  -3.82519   ATTAGTCATAAAATA              GCCTTC AGGCA GGAGGC              ACGATAATGGGGCTA  53 158
        oadG NONE
        oadA NONE
        oadB NONE
 STM474_3510 3539367 .. 3539389 -   -12   -4.4078   GGCGTCGAACTAAAA           CGACGCGG CTTTTGC CCGCGTCG           TTCGACGACTAGTCA  95 34
        yhcM 3534929 .. 3534941 -  -3.3  -3.39896   TGCACAGATATAATA                CCGCA TAA TGCCG                GAGCGCTGCGCTTGT  48 46
        rplM NONE
        rpsI 3533771 .. 3533784 -  -9.5  -5.64274   TTAGCCATAAAAAAA               CCCGC CGAA GCGGG                TTTTTTCGCTAACAG 100 64
 STM474_3503 NONE
        sspA NONE
        sspB 3531442 .. 3531459 - -12.7  -4.97158   GGAGACCAAACAAAA             CAGGCCC TTCA GGGCCTG              TTGATTATTTTACTA 100 30
        nanR 3530510 .. 3530532 -  -4.8  -3.60925   AAGCAGCAAATAATA           CAGAACGC TTATAGT GCGATCTG           CTTCACTAAACCGGG  57 57
        nanA NONE
        nanT 3527902 .. 3527924 - -16.4  -3.52113   ACTCCCTTACAAATA           TTGCCCGGTT GAA AACCGGGCAA           GCGGATTAACTTTTC 100 31
        nanE NONE
        nanK NONE
        yhcH 3525368 .. 3525384 -  -4.4  -3.61654   GACACTTACCCGAAA             CGTCGTG GCGT CACG-CG              GGTGAAAGAGATGCT  55 499
        yhcC 3514319 .. 3514344 -  -8.3  -2.60813   TATTGTGCGAAATAT         GCGTAGCGC CCCTCATC ACGCTACGC          TACAGGTGGTATCCA  63 20
        arcB 3511845 .. 3511861 -  -2.1  -3.86266   ACATCATCATAATAA              GCACGGC GCA GCCACGA              TTTCCCTGGTGTTGG  53 73
        yhbL NONE
        mtgA 3510278 .. 3510289 -  -7.2  -3.30124   TCGCAGGCCGGATAA                GGCG TTCG CGCC                 GCCATTCGACAAAAT  63 40
        yrbF NONE
        yrbE NONE
        yrbD NONE
        yrbC NONE
 STM474_3469 3497960 .. 3497975 -    -9   -2.9911   ATAAGCAAAAGATTA              CGCTGA TAAA TCAGCG               CGGTAAAAGTGCCGG  68 117
        yrbA NONE
        murA 3496267 .. 3496295 - -13.9  -4.08692   TAAGTGCCTGTAAAA        CAACCCCCGCA TCGCGTT CGCGGGGGTTG        TTCAGCGTACAGAAG 100 42
        rplU NONE
        rpmA 3493869 .. 3493889 -   -14  -4.75174   CATCGAATGTAAAAA            GCCCCGCA ACAGG TGCGGGGC            TTTCATCCGTTACCG 100 54
 STM474_3462 NONE
        obgE 3491568 .. 3491587 - -16.4  -4.94147   AAGAACATAATAAAA            CGGGCCGC AAAT GCGGCCCG             TTGGCTTTTGTAGGC 100 73
        greA 3489283 .. 3489297 - -12.8  -4.36914   TCTCCGTTGATAAAA               GGCCGC TAT GCGGCC               TTTTTCCTTTCTTTA 100 74
        rrmJ 3488071 .. 3488085 -  -2.8  -3.40899   AACCTCTTATTACAA               CTGTGT TAA AAACAG               CGTCAGGATACTCTA  46 84
        hflB 3486047 .. 3486066 - -12.8  -5.27206   CATAGACAAGAAAAA            CCCCGGGG CAAG CCCCAGGG             TTTCGGTGAGCGCTA 100 65
      tnpA_2 3485330 .. 3485362 - -11.3  -5.47218   GGTGAGTTAAAAAAA      TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA      GATGCGCCTATAAGG 100 100
        folP NONE
        glmM 3482991 .. 3483005 -  -5.7  -4.00469   TGAATACTAACCAAA               GCGAA TGACC TTCGC               AAGGGCAATTTAAGC  63 132
        secG 3482426 .. 3482441 -    -9  -5.92337   ACAGACGAAAAAAAA              GACGCT TTTC AGCGTC               TTTCTTTCGGAATAT 100 141
 STM474_3449 3480993 .. 3481008 - -11.8  -3.08798   ATCGTTGATGCAACA              GGCCGC GAAA GCGGCC               TTTTTTGTGAATATC  81 74
 STM474_3446 3478555 .. 3478573 -    -3  -3.07487   CCAGACTGTTAAAAG             TGGGGAAC CAG GTTCGCCT             TCTGGATATTACTCA  43 0
        nusA NONE
        infB 3474124 .. 3474138 -  -9.2  -5.61913   AATAAAGACAAAAAA               GGGGCC ATA AGCCCC               TTTTTAAATTTCTTG 100 202
        rbfA NONE
        truB 3472685 .. 3472699 -  -2.8  -3.95071   TAAACTGTTAAATAA               TTTACG CGA CGTTAA               GCGGCGGTATTCTAC  54 75
        rpsO 3472290 .. 3472306 - -10.8  -5.00884   ATCTGCTGGAAAAAA              GGGGCC ATGAA GGCCCC              CTCTTTCTGAAACTC 100 48
         pnp 3469920 .. 3469940 - -18.3  -3.57792   CCAGCCAGGTCTAAA            GCCCTCCGC ACT GCGGAGGGC            AAAAGGCTACCTTAC 100 37
        nlpI 3468899 .. 3468924 -  -7.5  -4.04023   ATTAACGAACAACAA         CGCCCTCACCC GCGA AGGTGATGGCA          ATCAAAAAGATTACG  72 59
        deaD 3466824 .. 3466846 - -13.4  -6.11392   AAAGAAATAAAAAAA           GCCCCGATTG TGA CGATCGGGGC           TGTATATTTTACTTT 100 69
         mtr 3465458 .. 3465484 -  -8.7  -2.61144   GGACTTGTGAAATAT         TGCCGGATGAA AACAG CTCATCCGGCT         CGTTCAATTACTGGT  63 33
 STM474_3435 3463908 .. 3463942 -  -8.4  -3.89215   GGTGATAAAGCGAAA     GTCCGCCACGGGCTGG AAT CCATCCTGCGGGAGAC     CCAGGCGGATGAAAT  71 106
        yhbT NONE
        yhbS 3459655 .. 3459691 -  -5.9  -3.75169   GAGTATCGCATCAAA   CAGCTCACAAAGCGCC AGAAAG AGCGCCTTGTGA-CGG    AACGCGAAGCGTTTG  60 74
        yhbP 3458598 .. 3458615 -  -3.3  -5.72207   GTGAAAGGAAAAAAA             GGCGAGG CCAG CGTCACC              ATTGATAAGGCTATT  89 365
        yraR 3457625 .. 3457636 -  -7.2  -3.43338   ACGTATATTAAGTAA                CCGG TGTG CCGG                 GTGGCGATAAGAATG  65 80
        yraL 3452728 .. 3452738 -  -3.2  -3.89822   CATTGATGCGACAAA                 CGGT ATT ACCA                 CGTTTAACGAAGGTT  54 392
        agaR NONE
 STM474_3408 3440972 .. 3440989 -    -7  -4.08064   AAGCGCCTCGCAAAA             CATGGC TTAAGG GCCATG              TTTTCATATGTTTGA  70 221
        garL NONE
        garR 3437121 .. 3437149 - -10.2  -2.64803   CCAGTCTGAAATTCA        GGCCCGGATCGC TACAC GCCATCCGGGCA        CAACGTCGTTAGCGA  70 34
        garK 3435484 .. 3435497 -  -9.5   -5.0925   CTGTAAAAGCAAAAA               CCCGC CGAA GCGGG                TTTTATGAAGAAGTG  93 443
        tdcA NONE
        tdcB NONE
        tdcC NONE
        tdcD NONE
        tdcE 3427099 .. 3427138 -  -2.7  -3.08798   ACCGTTCAGCGAAGA  TCCGT-CGCGGGGCGATC CACAC GATCGCCCCGTTCACGTT  ACATCGCCTGAGTAA  43 24
        tdcG 3425623 .. 3425642 -   -15  -5.58179   TATCACAACAAAAAA            GGGCGCAC TTTG GTGCGCCC             TTTTCTCAACTTCTG 100 86
        yhaO NONE
        yhaN 3422610 .. 3422647 - -11.4  -3.57144   GGCCGCAGCCTGAAA  TCATGCCGGATGGCGGCG CAAG CGCC-CGATCCGGC-TGA   TAACGGGTAGACCCG  87 98
        yhaJ 3420703 .. 3420713 -  -8.2  -3.53012   GGCGCCGCTTTTAAA                 GCGC CGC GCGC                 TATTTATTTTCCGGC  67 29
        ygjO 3408653 .. 3408664 -  -3.6  -4.27316   TGCTGCAACGCAAAA                CCAG CAAG CCGG                 GCGAAGGGTTAGGTA  64 420
         aer 3403393 .. 3403433 - -12.7  -2.78384   CCGCCTTCTATCAGA GCGCATCCGCCCGGTAAGC CTGTT GCT-ACCGGGCGGATGT-C ATTACCATTGCTACC  82 52
 STM474_3370 3401260 .. 3401274 -  -7.8  -5.40072   GCGGGCGGAAAAAAA               TCGCGA TTA CCGCGA               ACGGCGCGCAATGGC 100 258
        yqjH 3399813 .. 3399830 - -11.3   -3.5275   AAATCATATAATTAA             GCCACTC TAAA GAGTGGC              CTTTTTGTTTCTGAC  85 59
         mug 3398973 .. 3398990 - -14.1  -3.95073   CCGCACACGTATAAA             CGCCGCC GCAA GGCGGCG              TTTTTTTATCAGGCC 100 112
         gcp 3393290 .. 3393316 -  -5.8  -3.01712   GCTGCGTCTGGAAGA        GGGCCGCAACC GTCTGG GGAT-CGGCCC         ACAAGGGTTGACCGG  52 228
        folB 3392129 .. 3392147 -  -3.1  -3.40051   AAACACTGCAAAAAT             GGATCTC GCGTT AAGACCC             CATATATAACCGTTT  48 69
        uppP 3391169 .. 3391200 - -11.6  -3.64822   ACCCCGCCAGCTAAA      CGCCATCCGGCA CGATAAAT TGCCTGATGGCG       CTGCGCTTATCAGAC  87 97
        ygiF 3387612 .. 3387624 -  -6.2  -2.94708   TATCCTTTAAATAAT                GCCG GGTGG CGGC                GTTTCGCCTGATCCG  55 107
        glnE 3384750 .. 3384762 -  -5.5  -3.82484   ATAGCATAATTCAAA                CGGCT ACC AGCCA                CTTCCGCCAGCTTGC  61 8
        rfaE 3383170 .. 3383183 -  -2.3  -5.76949   TAGGTCGAAAAAAAA               GCAGC GTCA ACCGC                GAGATACGCGTCGAA  91 106
        glgS 3379949 .. 3379976 -  -9.8  -4.93316   CAACAAGAGTAAAAA        CGTGAACGGGCC TGAC GGCCCGCTCATA         TAAGATCTGAATAAT  93 68
        ribB 3378512 .. 3378531 - -12.2  -5.50925   AAGGAATACAAAAAA            GCCGATGA CATC TCATCGGC             TTTTTTCAACCATGA 100 50
 STM474_3345 3374485 .. 3374498 -  -2.3  -3.96068   CGATCCTAACAATAA               CCCCA GCTA TGGCG                TGCTTTGCGGTATGT  54 157
        ygiD 3372420 .. 3372438 -  -2.4  -4.08064   AACCGGCCTGGAAAA             GCATTATC TCC AATAAAGC             GTTGTTGCCGCTGTT  56 448
        nudF NONE
        yqib NONE
         icc NONE
        yqiA NONE
        parE 3364653 .. 3364672 -  -8.6   -3.0636   GCAGACCAGATAAAG            CGTGCAAC AACC GTTACACG             TCGAGATCCGCGAGA  66 19
 STM474_3334 3364078 .. 3364088 -  -6.8  -3.33265   ATTCCATAAAGCCAA                 CCAG TTC CTGG                 GCATGGACGCGCTGC  58 483
        ygiW NONE
 STM474_3328 3359971 .. 3360009 - -14.7  -3.31726   TTGCCGCAGATAATA   CCCTATCTCACGGTCTG AGTCA CAAACCGTGAGACAGGT   GGCGAGGAAGTTAAC 100 36
        parC 3357553 .. 3357596 - -13.3  -3.61103   TAATCCGATCTGAAA CCGTAGGCCGGATAA-GACGC TACT GCGTCGTCATCCGGCA-ACGG CAGAGCGCCGGATGG 100 80
        plsC 3356601 .. 3356621 -  -3.9  -4.18762   AAGCTCCATGTAAAA            CAGGCTAAA GAG TTGTGCCTG            AAAAAATGATTTCTA  62 61
        sufI 3355130 .. 3355165 -  -5.4  -4.07568   GCTCCTTCCTGAAAA    CCCTG-ACGGGTCTG CGCTATT CAGACCCGTACTCGG    ACGCTTTACGACGCT  65 31
        ygiq 3349362 .. 3349404 -  -7.2  -2.85351   TTTTTCCATATTACA TGCTTTAATAGCCATTATGA ATA TAACAACAGCTATTATAGCA ATTACGATAAAACAG  59 263
 STM474_3320 3349052 .. 3349071 -   -15  -4.77036   GCTGATGATGAAAAA            CTGGCCGC GCTG GCGGCCAG             AATTCGTGAGGCATA 100 199
 STM474_3318 3348590 .. 3348608 -  -7.4  -2.83522   AGGGTTGTATTAAAC             GCTTAACG CAT CGATAAGC             CCCTCAGTTAACGGA  58 1
        yqhC 3343697 .. 3343711 -  -5.6  -2.61912   TGACGTATCCATAAT               CGGCCA GGA TGGCCC               GGTTACGCTTCGTTG  50 62
 STM474_3311 NONE
        exbB NONE
        exbD 3340232 .. 3340259 -  -9.9   -5.4833   TTAGGCAATAAAAAA       GCCGGGT--GGCG ACTT CGCCTTACCCGGC        CTACAGCGTCAGCAG 100 46
 STM474_3305 3337731 .. 3337746 -  -3.2  -4.43911   AAATGGCAAGTAAAA              TAGCCC TAAT GGGATA               GGCTCTAAATCTCAT  62 30
        yqha 3336701 .. 3336716 -  -7.6  -2.81055   GAATATAAGAGATTA              GTCATC AGAC GATGAC               GCACTCTCGTTATCG  58 286
 STM474_3303 NONE
        yghW NONE
 STM474_3301 NONE
        hypO NONE
        hybA NONE
        hybB NONE
        hybC NONE
        hybD NONE
        hybE NONE
        hybF NONE
        hypG 3327846 .. 3327871 -  -6.3  -3.28712   GGTTTCGCCCCATAA         TCGATATATAA ATAA TTATATAACGA          TTATAGAGCGATATA  59 59
 STM474_3292 NONE
 STM474_3291 3326007 .. 3326039 -  -4.8  -3.63283   AAAGTTAAACCATAA      TGCCGGATGGGG TAGTAATGT CGTCATCCGGCA      TGGTATTCCCTGCTG  57 53
         gsp 3323001 .. 3323037 - -13.8  -3.81488   CGCTGGTAAACACAA   CAGGCGGGATATCGGCA CCCA CGCCGATATCCCGAC-G    AGAATGACCCCGTTA 100 38
 STM474_3288 3321160 .. 3321193 - -16.9  -3.18582   GAGGTTACTGATTAA     TCCCGAATCACTTAC TAAG GTAAGTGATTCGGGT      AAACAAACACAGCCA 100 154
 STM474_3284 3315052 .. 3315071 -   -15  -3.25539   TAAGGGTAATGAAGA            CGGCCACC CGAA GGTGGCCG             TTAGAACCCGGTAGC  95 76
 STM474_3283 NONE
 STM474_3282 3312701 .. 3312712 -    -3  -5.46698   GTGAAAACTAAAAAA                TGAT TTAA ATCA                 AAAAACAAACTATTC  79 199
 STM474_3280 NONE
        iraD 3311266 .. 3311279 -  -5.2  -3.69354   TGGGATAATGTTAAA               CGCC CGGCCC GGCG                TTCCTTCCTGCATTA  57 41
 STM474_3277 NONE
 STM474_3276 3307819 .. 3307829 -  -3.2  -4.09805   TGACGAACAATTAAA                 GGAT TCA ACCC                 TGCTTATGGCTTTCA  57 19
 STM474_3275 NONE
 STM474_3274 3305426 .. 3305442 -  -6.6  -3.09234   ATAAATCGCACGGAA              CTGGTT TCCCG AACCAG              AATGTCTTCGGTACA  54 163
 STM474_3272 NONE
 STM474_3271 3300883 .. 3300896 -  -3.8  -3.85698   TTGTGCTGGCAGAAA               CGCA TCCTGC TGCG                GCGTGTAAACAGATT  56 418
        cilB 3299430 .. 3299445 -  -5.4   -3.3761   CTCTGTTAATAAAAT              CAGGAA AAGA TCCCTG               CCCGGGCGAGTAATC  56 9
 STM474_3268 NONE
 STM474_3267 NONE
 STM474_3266 3296875 .. 3296891 - -10.9  -2.62616   TCAGTCGGTAGAGCA              GGGGATT GAA AATCCCC              GTGTCCTTGGTTCGA  74 217
        speC 3293282 .. 3293292 -  -4.6  -4.24948   GTATTACACTCAAAA                 CGGC ATT ACCG                 ACTGGCAGACCGTGT  66 209
        trmb NONE
        yggL 3288159 .. 3288180 -  -9.3  -3.11024   TCCCTCAAGACAAAG           CGGGCCGGC ATTT GCCGACCCT            GTACTTATTAGTCCC  68 33
        yggN 3287379 .. 3287399 - -15.5  -5.35365   AAAACAGAATAAAAA            GGCGCAGAT ACG ATCTGCGCC            ATTGTTTAAAAAGGA 100 45
        ansB 3286155 .. 3286176 - -15.1  -3.24232   GGTCTTCCAAAGATA           GCCCCGGCC TTCC GACCGGGGC            ATTATCTTTAATACT  95 33
        yggM 3284957 .. 3285008 - -12.5   -3.9461   CTCGCGGAATAACAA GGATAAGCCTGTCGCGCCAGCGGGTA AAA TACCTGATGGCGCGAC-G-CTTA-CC GACCTGTGGCGGTTA 100 61
        yggR 3280550 .. 3280566 -  -2.1  -3.08812   GTGGTTTTAACAAAG              CTGCGAT TTT AACGCCG              GTTCGCCAGGATACA  42 108
 STM474_3246 3279518 .. 3279556 -  -9.5  -3.53761   GAACGTTTGCTGAAA   GAGTGGCAGCCGGACGA AATTA TTGTCGGGCTACCGCTC   AATATGGATGGCACT  71 300
        yqgD 3271804 .. 3271821 -  -6.3  -4.52703   GAAACCACGAGAAAA             CTCTTGC GTTA ACAAGAG              CGCCCTTGTTCAGTC  76 244
        yqgB NONE
        speA 3269582 .. 3269609 - -15.8  -4.94487   TTATAAAATATAAAA        GGGTCGATTTAA ATAA TTAAATCGACCC         ACAAGTGGAATACTC 100 45
 STM474_3233 3268664 .. 3268675 -  -2.2  -2.52464   CTTTCCCGCAACCTA                CG-GC TAT GCGCG                TCACACAGTCCTTCC  39 104
 STM474_3232 NONE
 STM474_3230 NONE
 STM474_3229 NONE
 STM474_3228 NONE
 STM474_3227 3262390 .. 3262422 -   -10  -4.79756   TACAGAACGTAAAAA     GCCTTTCCGCGATTA ACCC CAA-CGCGAAAAGGC      TCTGAAGTCAGAAAA  91 137
 STM474_3226 3261193 .. 3261225 - -12.7  -5.80817   GTCAATATAAAAAAA      CCCTCCCGCGTCG TTAGGCC CGACGAGGAAGGG      TTTGAATTTGTTTAC 100 164
        speB 3259914 .. 3259937 -  -4.6  -4.57073   GATCTTGGCGAAAAA          CTG-GTGAACT CGC AGTTCTCTCAG          CGTCAGGAGTCCGAA  71 327
        tktA 3257074 .. 3257093 -   -15  -5.56673   AGGGAGAATAAAAAA            CGGGTCGC CGAA GCGACCCG             TTTTATGCCGTATTA 100 45
         epd NONE
         pgk 3251386 .. 3251405 -   -15   -3.6053   TCGGCGATAAATCAA            CGGGCAGG AATC CCTGCCCG             TAACGATTACTTCTT 100 32
         fba 3250192 .. 3250211 - -12.2  -5.73339   ATAACGATAAAAAAA            TGGCTTCC CAAG GGAAGCCA             TTTCAATCAGCAGAC 100 45
        yggB 3249058 .. 3249080 -  -8.5  -3.73904   AAAGAGACTGAATAA          CGGAT-AGCG GCTA CGCTTATCCG           CTCAATAACCAGAGA  75 89
        yggA 3248306 .. 3248322 -  -3.7  -3.54475   TTGTCCATCAGACAA              CGCTT AGTTGAA AAGCG              CGTGCATATGCGCGA  52 12
 STM474_3212 3247438 .. 3247463 - -12.5  -4.39828   AACACCGGGAGAAAA         CGCGGCCTGGA AGCG CCCAGGCCGGG          TGAGATTACTGCGTG 100 31
        rpiA 3245431 .. 3245444 -  -2.4  -2.92924   GGCAAACGATTAAAC               GTGA TACATG TCAC                CAAATTTGCCCTGAC  41 78
        serA 3243966 .. 3243987 - -11.6   -3.0955   AAACCAGAGAAAGGA           TGGGCAGG TCATCT CCTGCCCA            TTTAGCGGAAATTAG  79 37
        ygfB NONE
        pepP NONE
        ubiH 3239106 .. 3239117 -  -7.2  -3.30124   CCGTAGGCCGGATAA                GGCG AAGC CGCC                 ATCCGGTATTTTTAC  63 93
        visC 3237785 .. 3237811 -  -5.8   -3.8901   TTTCAAACGAGGAAA        GCCC-CCCGGC GCGATA GCCGGGAAAGC         AAAGTGTGACGGGTT  63 71
        gcvT 3236311 .. 3236331 -  -8.9  -2.84946   AAAAAGGATGAATCA            CGCGACGGC TTT GCCGTTACG            CACAAAAACAGGTTT  67 2
        gcvH 3235831 .. 3235846 -  -5.4  -3.41359   GTGCGAAAACGAATA              CGCAAA ATCA TTCGCG               TTGCAGTGAGTAGGC  56 72
        gcvP 3232818 .. 3232831 -  -9.5  -4.24123   TTAACAAGCTGAAAA               GGCGC CGAA GCGCC                TTTAGAAGACAGTCG  84 51
 STM474_3199 3231185 .. 3231196 -  -4.4  -3.94823   GACAAAGTAGAAGAA                GATG GCAG CATC                 AACGACGACTACCGA  60 337
        yqfB 3229411 .. 3229421 -  -5.4  -3.86897   CTTACTCCGGAGAAA                 CGTT CAT AACG                 ATGAACTGCGCCTCT  63 161
        yqfA 3228632 .. 3228674 -  -9.9  -4.16279   GATATCACGTTAAAA GC-CG-GATAGCCTGATAGCG CAA CGCCATCAGGCTCGCACGTGC TGTTCTCGTAGGCCG  84 85
        ygfy NONE
        ygfX 3226644 .. 3226665 -  -2.2  -4.15044   CCTGGTGTGAACAAA           TTCTCGGC GAAATG GCCGAACA            CTACGCCTGAAACCT  55 88
        xerD NONE
        dsbC NONE
        recJ 3222607 .. 3222632 -  -9.1  -3.30903   AAAATGCGGTTATAA         GGGCGAAAT ATTAGCGG ATTTCGCCC          CTTAATTACAGCGAA  71 62
        prfB NONE
        lysS 3219899 .. 3219929 - -17.7  -3.18366   GCCTGAACGAAGAGA      TGCCGGATGGCGGC TGAT GCC-CCATCCGGCA       ATTTACATCTTATTT 100 35
 STM474_3185 3217818 .. 3217845 -  -4.1  -5.12617   GAACCACCTAAAAAA        CGGGGATTATA TCGGTG TCTACTCCCCG         CTTGACGGGCTGGAC  77 475
 STM474_3182 3216926 .. 3216946 -  -7.5  -3.60098   ATTCTCCATGTCAAA            GTGATCGTC AGC GACGACCGC            CACACCGAGGTGGAC  67 85
 STM474_3181 NONE
 STM474_3180 3215646 .. 3215666 - -11.9  -5.99154   CAGGAAACAAAAAAA            GAAGGGAGC GGT ACTCCCTTC            GTAAACATGTCAGAA 100 235
 STM474_3179 NONE
 STM474_3178 3213348 .. 3213364 -  -5.1   -5.4593   TTAAAACAATAAAAA              TAGATCG ATA CGATCGA              TGATTATGATCGTAA  87 516
        stdA 3212497 .. 3212522 -  -4.7  -4.61868   CAGTCAGATATAAAA         GCCGTCC GATCCCCTCCGT GGACGGC          TTCTCCCTGTCGTTA  71 55
        stdB NONE
        stdC NONE
 STM474_3174 NONE
 STM474_3173 NONE
 STM474_3172 3206567 .. 3206584 -  -4.9  -2.93747   ATGAAAGGCCATACA             TTCA-GCG TCC CGCCTGAA             TTCTGTATTTTACTC  50 126
        yohL 3205224 .. 3205247 - -12.5  -3.88396   GGCTAAAGTAAAAGA          TAGCCGGGA TATAAC TCCCGGCTA           TTTTATATAAGAATC 100 23
 STM474_3167 3202373 .. 3202386 -  -2.4  -5.41143   GATTGTTTAAAAAAA               GTGA GTTTTA TCAC                AAAGGAAATGACGCT  77 60
        yqeF 3200730 .. 3200746 -  -8.1  -4.42788   CGCAATGGCACAAAA              TCAAAAC ACT GTTTTGA              TTTATTTAACGGCAT  79 399
        kduI NONE
        kduD 3198957 .. 3198974 -    -7  -5.69473   GAGATCATAAAAAAA             CCCTGT ACGAGG ACAGGG              CTTTATCAGTTTTTT 100 87
        araE NONE
        ygeA 3196012 .. 3196022 -  -4.6  -3.71848   CCCCGGCAGGAACAA                 CCCG TAC CGAG                 TTACTAACGCTGAAT  55 447
        lysA 3193873 .. 3193908 -  -9.7  -2.86164   CCTGTAATGATGACA   CGGCGCTGGGCGCGGCA AAAG CGCTGCGC-CAG-GCCG    GATTACGCATCCCAC  65 274
         aas NONE
        lplt 3187762 .. 3187777 -  -4.6  -3.55622   CTGAACGGGGCCAAA              CCCGCA GGCG CGCGGA               ATACCTTGTTCAGCC  52 387
 STM474_3151 3184298 .. 3184313 -  -6.8  -2.83519   GTTATAAACAGATGA              TGACGC CCTT GCGCCA               TTTTATTCACCTTTT  55 223
        ygdP NONE
        ptsP 3181205 .. 3181229 -  -9.2  -3.37354   GATAGCGATTGATAA          GCGCGCCTGC GCGTT GCAGACGCTC          CAAAGGTGCGAATAA  71 167
         lgt NONE
        thyA 3179438 .. 3179457 -  -7.1  -5.81032   GAAGGGTAAAAAAAA            CCGACGC GCGATG ACGTCGG             TTATGGCAGGATCGT 100 47
        ppdA 3178813 .. 3178840 -    -4  -3.37796   CTCCAGTAGCGAGAA        CCCCCGCGTG GTTATTGA CACGTGGCGG         CCTCGTTACGCTCGC  50 9
        ppdb NONE
        ygdB NONE
        ppdC NONE
        recC NONE
         ptr NONE
        recB NONE
        recD 3165704 .. 3165716 -  -9.1  -3.30124   TTGGAGGCCGGATAA                GACGC TAC GCGTC                GCCATCCGGCGAGAA  71 47
        amiC 3162719 .. 3162732 -  -8.1  -3.41636   AACCAACTTAATGAA               CACCC TTAC GGGTG                TTTTTTTGTATCTGT  65 111
        mltA 3161132 .. 3161150 - -10.3  -5.88565   CTCAGAATAAAAAAA             GGTGAGG TTATT CCTCACC             CCTGCTCACTATTTT 100 96
        ygdL 3159851 .. 3159873 -  -2.9   -2.9348   GCGAAAGTTTATACA          TTAT-GATGT GATG ACATCGATAA           CGATTGAAACATTAT  42 457
        ygdI 3156957 .. 3156976 - -10.7  -2.57423   ATAGTGATTAATGTA            GCACCGC CATATT GCGGTGC             TTTTTTTTGTATAAC  74 47
        gcvA NONE
        ygdD NONE
        ygdE 3154178 .. 3154222 - -16.6  -3.34962   TCGTAGACCGGATAA GCG-TGC-GTCATCCGGCGC TGATGAC GCGCCGGACGACGGCAACGC GTTTTTATCGCTCGT 100 30
 STM474_3120 3147861 .. 3147873 -  -4.9  -3.33509   GTTGAAATAATCGAA                TAGTT AGC AACTA                TCATCATACTGAATA  54 85
        fucA NONE
        fucO 3145786 .. 3145798 -  -4.9  -3.95073   CTTGAGACGCATAAA                GAAAT GGC ATTTC                TTTGCCGCGATATTG  60 194
         syd 3138587 .. 3138598 -    -3  -2.95093   ATACCTTAAGTAAAT                TTTC ATAT GAAA                 GTGCGCAAAAACATT  42 157
        yqcC NONE
        yqcB NONE
 STM474_3109 3136212 .. 3136224 -  -3.3  -5.01535   GGAGAAGTATAAAAA                GCGCG CCA CACAC                ACTCACCGTGCAACA  76 340
        gudT 3134710 .. 3134721 -  -4.4  -2.64099   CGTTGTCATGATAAT                TGTC CTGC GACA                 GGTTTCAGTTCAATA  46 4
        ygcY NONE
        gudD 3131972 .. 3131997 - -15.5  -3.54436   CATACACCCAGAGAA         GAACCGGTTCC TTAC GGAACCGGCTC          TGACTTAACGCACCA 100 30
 STM474_3104 3130337 .. 3130373 -    -5  -3.85698   TTGCTGCGCTATAAA   CCTGGCGCCAAC-GTAGC AGC GCGCCTGATGGCGCC-GG   AACCAGCTGAATTTA  61 434
        rumA 3126596 .. 3126622 - -10.9  -2.52464   CCTCTCCTTAAGGGA        CCAGGCCTACCG AAGT CGGTAAGCC-GG         TAATCATTACATGCG  74 32
        relA 3124257 .. 3124286 -    -3  -4.63184   AATGTACGTCAAAAA       CATACCCCATA TCTCATGCT TATGGGGT-TG       CTAATGCGGCTTTGC  65 82
 STM474_3100 NONE
 STM474_3099 3123361 .. 3123374 -  -2.5  -3.60597   AGAAATGTAGAAATA               TAATA TTTT TATTA                TGACCTATTTTTACC  50 292
        mazG 3121988 .. 3121998 -  -4.6  -2.88788   GGAGGGAGAAAATAG                 CCCC TTT GAGG                 TAAATGTTTTTGACG  48 100
        pyrG 3120170 .. 3120193 - -13.9  -4.08164   AAAACTTCAGACAAA          CGGTGCACC GCTGAG GGTGCACCG           CCGTTCTAACTTTTT 100 40
         eno 3118786 .. 3118799 -  -9.5  -5.77988   ACAGATACAAAAAAA               CCCGC CGAA GCGGG                TTTATACGTTAAGAG 100 53
 STM474_3095 3117811 .. 3117824 -  -3.8  -4.06533   TAAATTATTAAAGAA               CAGC TAATTT GCTG                ATTTTGATGCAAAAA  59 221
 STM474_3094 3117390 .. 3117419 -  -3.6  -4.28994   TACTACGTATCAAAA      CGGTTTATCCCCGC TGGC GCGGGGA-ACAC-G       TGGTGGCCTCAAATA  60 122
 STM474_3092 3115020 .. 3115035 -  -5.4  -3.36492   GCCTGAAGGGCATAA              GTGC-GG CCG CCTGCAC              GGACACTCGTTTATG  53 386
        cysJ NONE
        cysI 3110992 .. 3111003 -  -3.6  -2.99471   TCAGGCCTACACAGA                CGCC ATCC GGCA                 ATTCAGGTTATTCCC  45 33
        cysH 3110143 .. 3110159 -  -9.4  -4.32804   ATAACCAATTTAAAA              TCCGGC TGCCT GCCGGA              TTTTTCATAGCAGCA  86 67
 STM474_3086 3108722 .. 3108734 -  -3.4  -2.82803   TATCGACACGTAAAC                TCCA GCATG TGGA                TAATAAAAGCACTCT  43 105
        ygcB NONE
 STM474_3084 NONE
 STM474_3083 NONE
        yghJ NONE
 STM474_3081 NONE
        ygcH NONE
        cas1 NONE
        ygbF 3100209 .. 3100221 -  -4.1  -4.41114   TTACTACATAACAAA                CTACC AAC GGTAA                GATAACAATTCCTTA  64 60
        cysD NONE
        cysN NONE
        cysC 3094886 .. 3094903 -  -9.8  -2.79831   GTAACCTTGACCATA             CCGGGC ATACAA GCCCGG              TGGTGTCTCAGGATC  69 33
        ygbe 3094426 .. 3094452 - -13.8  -2.57344   GATTGCCGCGACAAC         GCCGGCAAATGT ACC ACATTTGCCGGA         TGTTACGTATACCCG  86 110
        ftsB NONE
        ispD NONE
        ispF NONE
        truD NONE
        surE NONE
         pcm 3090305 .. 3090328 -  -6.8  -3.21912   CGTGCAACGCATTAA          GTGAACAC GGGAAAAT GTGTTCAC           GATACGCTTAACCCA  59 116
        nlpD 3089050 .. 3089062 -  -3.3  -3.35996   TATTCTGACTCATAA                GGTGG CTC CTACC                CGTGATCCCTTGACG  48 73
        rpoS 3088005 .. 3088048 - -14.8  -4.27117   CTGGCAGAAGACAAA CGGTAAAAAAAAGGCCAGTC GACA GACTGGCCTTTTTTTGACAA GGGTACTTACTCGCG 100 32
 STM474_3060 3085154 .. 3085167 -  -9.5   -3.2661   CCAAACAATAGCGAA               GCGGC GCAA GCCGC                TTACGTCATCATCTT  72 26
        ygbJ 3083274 .. 3083287 -  -2.3  -2.74999   CAATTTTTAACATGA               CGGCT CCTC AGGCG                TGACGCCAGGCAGAG  40 3
        ygbK NONE
        ygbL NONE
        ygbM NONE
 STM474_3054 NONE
 STM474_3053 3077820 .. 3077840 -  -3.9  -4.04174   CTGGAGATAAGCAAA            GCCGGCAAA ATT TCTGTCGAC            AGCGCGCGCTCGCTG  58 310
 STM474_3051 NONE
 STM474_3050 3075424 .. 3075463 - -21.6   -3.5394   AAAGTCTGGTGTAAA  CGTGTCAGACCCGATAGCG CCG CGCTATCGGGTCTG-CGCG  CCGGAACAGGCTTTT 100 40
 STM474_3048 3072154 .. 3072166 -  -2.6  -4.03885   GGCCAAAAAAACGAA                GCCG TAATC CGAC                GCAGGTAGTTACTCG  56 34
 STM474_3046 3070407 .. 3070425 -  -6.6  -2.92463   TGCATCACTGATATA             TGCACAGG TTC CCGGCGCA             ATCAGCAAAGGATTA  53 395
 STM474_3043 3068571 .. 3068586 -  -6.2  -3.63569   GTAAGCCTTTAACAA              TCAGAA TGTT TTCTGA               ATCAGCGAAAGCTGG  60 332
        invF NONE
        invG NONE
        invE NONE
        inva NONE
        spak 3060536 .. 3060551 -  -3.2  -2.85078   GATATTGCAGTAAAC              GAGGTG TTTT CATCTC               ATTAGCGACCGACTA  44 19
        invC NONE
        invI NONE
        invJ 3057817 .. 3057831 -  -2.1  -3.12351   CTGTCTCACACGCAA               TGACA TCAGG CGTCA               TCCTCCTCGCCAGAT  42 16
        spaO NONE
        spaP NONE
        spaq 3055947 .. 3055966 -  -3.6  -2.76037   ATTTCAAAGTACAAC            GCGTAAAA CATT TTTTACCC             CTTAGCCAACGCCAG  43 20
        spaR NONE
        spaS 3054043 .. 3054053 -  -2.4    -3.767   GATGCAGTTATTAAA                 CCCC GAC GGTG                 GTTAGTGAACATTCA  51 81
        sicA NONE
        sipB NONE
        sipC 3050367 .. 3050423 -  -7.9  -3.34806   ATATTAAGCATAATA TCCCCAGTTCGCCATCAGGAGCGCGAT TAA ATCACACCCATGATGGCGTATAGATGA CCTTTCAGATTAAGC  65 35
        sipD NONE
        sipA 3047260 .. 3047274 -  -2.1  -2.60075   TCCCGGTTAATTAAC              GC-TGC ATGT GCAAGC               CATCAACGGTAGTAA  39 6
        iacP NONE
 STM474_3019 3046680 .. 3046691 -    -3  -2.90075   TCCTCTTGAATTATA                TCTT TTAT AAGA                 TTGCTTCTTCAAATT  42 18
        sicP NONE
        sptP 3044605 .. 3044638 - -14.9  -4.18019   ATAATTATACAGAAA     TAGCTTACTTTCAGA TAGT TCTAAAAGTAAGCTA      TGTTTTTATCAGCTT 100 34
        prgH NONE
        prgI NONE
        prgJ NONE
        prgK NONE
        orgA NONE
        orgB NONE
        orgC 3035908 .. 3035920 -  -3.3  -3.17982   ACAAATCGCCAGCAA                TGGGG GTT CACCA                GTCAATTGCCTCTTT  46 20
        hilC 3034684 .. 3034696 -  -6.3  -2.96307   AATAATTTCACAAAT                CAATG GTT CATTG                TACGCATAAAGCTAA  55 12
        sprB 3033422 .. 3033440 -    -6  -3.90048   TTGCCTGCAAAAATA             TGCCTCAA TGA TTGAGCCA             GGCTACCAACCACCT  66 128
        avrA 3032035 .. 3032046 -  -2.2  -2.77043   CGCACCAGGCGAAAG                CCAG CGGG CTGA                 ATACCACACTACTGC  39 456
        ygbA 3028273 .. 3028283 -  -2.4  -4.25104   GTGGCTGGACCAAAA                 GGCG CGG CGCA                 GCGTCTGGGGCTTAA  60 163
        hycA 3021649 .. 3021679 -    -9  -3.65542   CCCATCCCCAAAACA       TTCATGACATGGCG CAA CGCCACATCGCGAA       TCAAAGCGGGCAACG  75 49
        hycB NONE
        hycC NONE
        hycD 3018200 .. 3018218 -  -3.7  -2.90992   AACTCTCTTAAATCA             CGCCGCC AGCAA GGAGACG             AAGGCTAAAAACGCA  46 4
        hycE NONE
        hycF NONE
        hycG NONE
        hycH NONE
        hycI NONE
 STM474_2982 3013367 .. 3013379 -  -7.7  -3.31144   GTGTCATCGTCACAA                GTGTC GAT GACAC                GTAATGTCGCCAGTG  65 91
        hydN 3012640 .. 3012651 -  -5.8  -3.34962   CCGTAGACCGGATAA                GGCA TTGA TGCC                 GCCATCCGGCAATGC  56 73
        hypF 3009804 .. 3009830 -   -10  -3.54424   GCTTACGCCCGGAAA         CCGCTCTGGCGC GCC GCGCCGGAGTAG         CCGTCAACCGCGGCG  71 508
        ygaA 3005887 .. 3005900 -  -2.3  -4.25283   AGTGGTCGATGAAAA               CGGCA AACT CACCG                GCGCCATTAACCTGC  60 66
        mltB 2999517 .. 2999542 -  -9.8  -3.89505   AAAAAGCCATAATAA         TAGCGGAGGGG GTGCT CCCCTCC-CTA         AGCGTAAATTAGCGC  81 34
        ygaD 2998556 .. 2998575 -    -8  -2.84098   CTGTTGAAGCAATTA            TACTGTAT GCTC ATACAGTA             TCAAGTGTTTTGTAG  61 26
        recA 2997344 .. 2997363 - -11.4  -4.26189   GGAGAAATGCCAAAA            GGGCCGCA TAAA TGCAGCCC             TTGATGGTAATTTAA  93 92
        recX 2996712 .. 2996758 -  -2.9  -3.25652   TGTATTTAAGGAATA TTCGTCGCAGACGCTGTTCGCC GTTA AGCAACCCGCGTCCA-GACGGA AAAAGTGGGAATAAG  45 80
        alaS 2993908 .. 2993929 - -17.3   -3.6502   TAGCGTTGACGTAAA           CGCCGCAGC ACGG GCTGCGGCG            CCAACGAACGCTTAT 100 43
        csrA 2993049 .. 2993059 -  -5.4  -3.10796   CCGTATCAGGTAAGA                 GATG GTG CATC                 CGGGAGGATTCGAAC  52 493
        yqaB NONE
        yqaA 2991109 .. 2991126 -  -3.5  -2.76171   TTTAATAAGCATAAC             TGTAATGG CGG CCAT-ACA             TGCCAAACCTACAAT  43 43
        gshA 2989394 .. 2989410 -  -2.2  -4.85782   TTTTTTAAAAATAAA              CTGAAC TCTTT GTTCCG              GGGCGAGTCTGAGTA  66 126
        luxS 2988793 .. 2988811 - -10.2   -5.5604   TTAAGCAATAAAAAA             CCCCGGCC ATA AACCGGGG             TTAATTTAAATACTG 100 60
 STM474_2954 2987095 .. 2987110 -    -9  -4.41206   AACTATCTGATAAAA              GGGATC TGCG GATCCC               TTTTTTAGTAGACCA  85 45
 STM474_2940 2972171 .. 2972182 -  -7.2  -3.16564   GGTGTAGCGTAGGAA                CCGC CGCA GCGG                 TGGGGATTTTTATCG  59 150
        ygaC 2971355 .. 2971384 -  -8.5  -2.53911   CTAAGGCGTAAGTTA       GCGTCGCGACTGGC ATT GCCAGTCGCG-CTT       TTAGTCGGTTTTTTC  63 26
 STM474_2935 2969649 .. 2969659 -    -4  -4.58283   GAACCGGGCGAAAAA                 TTGA TCC TCAA                 AGCGGCAGATGTCAC  69 167
        yqaE 2968245 .. 2968262 - -14.1  -3.31263   AGGTTATCCTGATAA             GCGGCGC TTAT GCGCCGC              CGGTGGCCGGTAATT 100 39
        ygaU 2967645 .. 2967664 - -13.6  -2.62192   CGCCAGCGAATTAAT            GCGTCAGC ATTT GCTGACGC             CGATTCCCATTATTC  78 88
        tctD NONE
        tctE 2954874 .. 2954895 -  -2.9   -4.2717   ATCATTTGATTAAAA           CGTCACACC TCAA GATGCGACT            TTTTGTAAACGTGCT  58 65
        nixA 2953737 .. 2953767 -  -9.8  -2.59876   TCAGGAGATAAAATG       CTTCGGCAATGATA TGA CACCACTGCCGAAA       TGCTATTTTTAAAGA  68 47
       pipB2 2948911 .. 2948924 -  -3.1  -4.17023   GGAACTACTGGAAAA               TATGG CAAC CCACA                GTTATTGGGTTTTAC  60 479
        iroN 2946137 .. 2946159 - -17.8  -3.29043   AACCCGCCGCCAGAA           TATGCCCGCC AGC GGCGGGCATA           ATCCATCAAAACGAG 100 31
        fljB 2935770 .. 2935787 -  -9.8  -4.99134   ATGCTAAATGAAAAA             GCCCCG AATTCA CGGGGC              TGAATAAAACGAAAT  93 44
        fljA 2934942 .. 2934955 -  -3.1  -3.42548   ATGAATGAAGAGTAA               TCATC ACCA GACGA                CAATAGTGTAACTGC  50 269
 STM474_2902 NONE
 STM474_2901 2930338 .. 2930353 - -11.8  -2.80016   TCCCATTACTAATGA              GCGCCC AACA GGGCGC               TTGTGAATCAGGTCA  79 33
 STM474_2900 2929461 .. 2929477 -  -5.1  -4.10855   AAAAGCTTCGGAAAA              CCGTATC GTG GATACCG              TTCAGCTGCCGCCTG  63 190
 STM474_2899 2928597 .. 2928621 -    -5  -3.91084   CCAGGTTGAATGAAA          TCTTCCGTTG GGCGG CTACAGAAGA          GCTGACCCGCAGATA  61 495
 STM474_2898 2927577 .. 2927590 -  -3.1  -2.81888   TTTTAAACTGAATTA               CGGTA GGCG TACCA                ACTTTGTATAAGATA  43 135
 STM474_2897 2925964 .. 2925983 -  -8.6  -3.43071   TTGCACATCAACCAA            GCCCATAC GAAT ATATGGGC             CATAACGATGCTTTC  71 222
 STM474_2893 NONE
 STM474_2892 NONE
        hxlB NONE
 STM474_2890 2916223 .. 2916244 - -13.7  -2.93783   AAAAGTGTGAAATCA           GGCGCAGAG TTCC CCCTGCGCC            TTCACCTCAGTGATG  87 32
 STM474_2883 2910809 .. 2910848 -  -5.8  -4.82685   TTCAAAAAAAAAATA  GCGAAATACACCGTTTCA ATAC CGAAATGGTGTATTTTTC   AGAAAAAAAACCACC  76 116
 STM474_2878 2904151 .. 2904169 -    -6  -3.41602   TTCAGTTGATTATAA             CTCTGC TGCGCTT GCAGAG             ATAAGATACAGCAAC  56 393
 STM474_2867 2895217 .. 2895240 -  -2.4  -3.05022   GCTCTCAGACATATA          GCGGCT GGTGCGGACGTG AGCCGC           CGTGCGGCAGAAAGG  42 49
 STM474_2866 2894373 .. 2894395 -  -9.9  -4.22948   AAAACGCATGCAAAA           CCATGCACC TTATG GATGCATGG           CTTATTTCGTTAAAA  84 72
 STM474_2865 2891177 .. 2891206 -  -3.5  -3.88603   AGTGATAAAAATGAA       GTACGAAGAGC TTATAACC GCTCAACGTAC        CTGAATAAAAGAATA  56 92
 STM474_2860 2886479 .. 2886494 -  -3.3  -3.59262   TTTCATACCTCGAAA              GTTCA CATAAT TGAAC               TTAACAACCAACTAC  51 26
 STM474_2859 2885437 .. 2885465 -  -8.1  -3.28924   CATCTTTCCCGATAA        TCCAGCCATGGCC GCA GTGCATAGCTGGA        CTTTGTTTTTTCAAT  65 513
 STM474_2857 2884971 .. 2884981 -  -2.4  -3.09908   TTTGGGCAAAAGAAT                 GCCC GGC GGGT                 TTACGCCATTAATTT  42 51
 STM474_2856 2884557 .. 2884576 -  -6.3  -2.89743   AACGCAGAGATCACA            GCCCGGC ATGGCG GCCCGGC             GTTCTTCGGGAATGA  55 161
 STM474_2855 NONE
       endph NONE
 STM474_2853 2881104 .. 2881138 -  -4.4  -3.68988   TGCCACGGAACACAA     TACTGTATATATAACC ACT GTTTATAATTACAGTA     TATTAGAAAGTTAGA  55 106
 STM474_2852 NONE
 STM474_2851 2880563 .. 2880574 -  -2.2  -3.72302   CTTAGATCAAAAAAT                GCTC ACTA AAGC                 CTCGCCTTGCTCGTT  51 91
 STM474_2850 2878994 .. 2879013 - -11.4  -4.33675   ATGACATGAGCAAAA            GCCCGCCA GTTC TAGCGGGC             CTCATCAAAAACGAT  93 437
 STM474_2848 NONE
 STM474_2847 2876849 .. 2876877 -  -6.6  -3.29144   TGACGCCGCGCAGAA        CCAGGAGGACGT GAACA ACATCCGCCAGG        CCATGAAAAGCGCCA  56 393
 STM474_2844 NONE
 STM474_2843 NONE
 STM474_2842 NONE
 STM474_2841 NONE
 STM474_2840 2870931 .. 2870945 -  -2.8  -2.59927   AAGCGTCATAATTCA               GTCC CATAGCT GGAC               GGTCTGCGCCGTGGT  40 8
 STM474_2839 NONE
 STM474_2838 NONE
 STM474_2837 NONE
 STM474_2836 NONE
 STM474_2835 NONE
 STM474_2834 NONE
 STM474_2833 2868408 .. 2868462 -  -4.1  -4.24948   CCATCAGAGGGAAAA GGGAGGCAGCGCGGGCGCTTGTGCCA GCAG TGGCACAAA-GATCACCCCGCCAGCC AGCGCAGCAGAGTGT  62 12
 STM474_2832 NONE
 STM474_2831 2867445 .. 2867463 -  -3.8  -2.76261   CGGTAACCGGGAAAG             GTCAATGA CTG CCATTGTC             TGCTCCTGTTGATAT  45 8
 STM474_2830 NONE
 STM474_2829 NONE
 STM474_2828 NONE
 STM474_2827 2863868 .. 2863906 -    -9  -5.58074   CAACCATCAAAAAAA   TAGCCATTGCTGCTATAT AAC ATATAGCAGCAGTCTCTA   CTACATATCTATATT 100 42
 STM474_2825 NONE
 STM474_2824 NONE
 STM474_2823 2860740 .. 2860765 -  -8.9  -3.90291   ATCCTGTTAATGAAA         TACTGGCGCGG CTGC CCGCGCCGTTA          AGGTTAATCAGAGGC  79 33
 STM474_2822 2860383 .. 2860403 -  -7.5  -3.42395   GCGACCAGTGAAAGA            TGGTGGCGA TAT CCGCCACAA            GATCATCAATCGTCA  65 38
 STM474_2821 NONE
 STM474_2820 NONE
 STM474_2819 NONE
 STM474_2818 2855863 .. 2855889 -  -2.5  -3.29144   CCACTTTTGCCATAA        TCGCAATAATGA TACA TCATTATT-CAA         TATTAAGAACCAATC  46 39
 STM474_2817 2855593 .. 2855609 -  -7.2   -5.4505   GGCGGCAACAAAAAA              CCCGCC ATTAA AGCGGG              TTCTGTTCAGAAACT 100 32
        yfiG 2837044 .. 2837063 -  -5.8  -3.51825   CCACTTCAACCACAA            GTTTATCCG GCA CGG-TAAAC            CTCTTTGGCGCGAAC  57 8
        yfjF 2836760 .. 2836778 -  -3.1  -3.64716   TTATCCGGCAAAAGA             GGCTAAT TATCT ACCAGCC             GATTTTTCGGCGCGC  51 13
        grpE 2832746 .. 2832766 -    -9  -5.53288   TTTAAGCTAAAAAAA            TGGCCGAC TTTAC ATCGGCCA            TCAAACTTTTACTTC 100 34
         ffh 2828103 .. 2828130 - -13.4  -4.43307   GTGTGAATAAAACAA        CCGGGCCCCATC GAGG AACGGAGCCCGG         CGTCATATTAAAAGC 100 285
        rpsP NONE
        rimM 2827269 .. 2827279 -  -2.4  -3.33744   CGGTGGTTTAAAAAC                 CAGG ATC CCAG                 TCTACTTCGATAGTA  45 7
        trmd NONE
        rplS 2825998 .. 2826020 -   -12  -5.52023   ACCACCAATAAAAAA           GGGGTCAGCA ATT CGCTAACCCC           TTGTTTTACAACACG 100 66
 STM474_2787 2816784 .. 2816796 -  -2.7  -2.92444   AGAGTTAAAAAAAGT                TTACG TTT CATAA                GTTCCCTTATACATG  42 32
 STM474_2786 2815223 .. 2815245 - -10.5  -5.33866   CAAACCCATAAAAAA           GGGGCCAGC GTAAT GCCAGCCCC           TTCTTTTCTACAAGC 100 162
        aroF 2811876 .. 2811892 -  -2.3  -2.52933   GGTCAATTCAGCAAC              CATAACA ACC TCTTATG              CGACGCGCACCGCCA  39 21
        tyrA 2810722 .. 2810736 - -11.4  -5.37593   CCTTAAACGAAAAAA               GCCAGC AAA GCTGGC               TTTTAGTATAGATGT 100 46
 STM474_2781 2809390 .. 2809416 -  -4.3  -4.67353   GCAGCGATGGAAAAA         GTCGCGCAG GCAAACTCT CCGCGCGTC         GCGGCGCTCGGCAGC  71 400
        rluD NONE
        yfih 2805145 .. 2805159 -  -5.7  -3.83998   CTACTGGAGATTAAA               TGAGG TCATC CCTCA               ATTATTCAAGGTGAA  61 98
        clpB 2802492 .. 2802509 - -10.5  -5.27335   GTTTTTAAACAAAAA             CGAGCCC GTCA GGGCCCG              TTTTATTCAAATTTG 100 45
 STM474_2768 NONE
        kgtP 2794622 .. 2794648 -  -6.6  -3.19463   GTCACCAGGGAGTAA        GCCCTGACCGC AGCGCA GCGAT-AGGGC         TGATGTTTTCTTTGA  56 165
        yfiF 2787745 .. 2787758 -  -9.5  -2.57344   TATCGCCCGGATAAC               GGCGC GAAA GCGCC                TTGTCTGACCGGGCG  68 93
        yfiD 2786274 .. 2786298 - -16.5  -5.34857   CCAAATAAAACAAAA          GCGGAAAAGGC CCG GCCTCTTCCGC          TTGTTATTACCGGAT 100 46
        yfiE 2784657 .. 2784678 - -14.5  -3.44206   GAAGAGTGATGATAA           TGCCGGGTT CGTT AACCCGGCA            TTTTTTTATCTTCCA 100 15
        yfiC 2782127 .. 2782138 -  -3.6  -4.08064   AAGCCGCGTGGAAAA                CGCC GATG AGCG                 GGTGGTGATTCAGCA  60 335
        rpoE NONE
        rseA NONE
        rseB NONE
        rseC 2777310 .. 2777322 -  -4.1  -4.96848   TGGTGGACACAAAAA                CCATG ACT CATGA                TGTCGTAGGTTGACT  74 430
 STM474_2749 2775897 .. 2775909 -  -4.1  -4.15044   GGTGGCTCCAACAAA                TGGCT TAA AACCA                AAGTCAATGAGTGGC  60 116
 STM474_2740 2767734 .. 2767758 -  -3.5  -3.97834   TAATTCCACCAGAAA         GCCGTTGGTG TTCGAG CACCG-CGGC          TTTCGCCTTTTTAGT  55 52
 STM474_2739 NONE
 STM474_2738 NONE
 STM474_2737 NONE
 STM474_2736 NONE
 STM474_2735 2764306 .. 2764316 -  -2.4  -3.57792   TTAGCCACGGTTAAA                 CTCC TGC GGCG                 GTTCTGGTAGCGGCA  49 0
 STM474_2734 2763582 .. 2763618 - -12.9  -4.09685   TTTTAGGCGGTAAAA    CCCGCCCGTTACCGAGG AAT CCCCAGCAATGGGTGGG    TTGAATTGATGGGAT 100 424
 STM474_2733 2762969 .. 2762985 -  -2.9  -2.97667   TCATCCAGCAAAGGA              CGCATAG ATA CCATGCC              ATTTACACGATAGAT  42 262
 STM474_2732 NONE
 STM474_2731 NONE
 STM474_2730 NONE
 STM474_2729 NONE
 STM474_2728 NONE
 STM474_2727 2760486 .. 2760500 -  -7.1  -5.59534   AACGACAATAAAAAA               CACGC TCGCG GCGTG               TCTCTGTCGCGGTGA 100 114
 STM474_2726 2759419 .. 2759441 - -12.8  -3.61164   AATGGCGGAAAAAAT           TGACCAGTGA AGT CCACTGGTCA           TGGGTCATGCAGTTG  95 337
 STM474_2724 2759024 .. 2759041 - -10.5  -5.64421   AGGGGAAATAAAAAA             GGCCGCC GAAT GGCAGCC              TCAAATGGAATATGT 100 42
 STM474_2722 NONE
 STM474_2721 2757124 .. 2757140 -  -2.2  -2.86432   TTGAACATCATGACA              GGAACA GAGCA CGCTCC              GCCTCACGCCGACGG  41 1
 STM474_2720 2756333 .. 2756347 -    -5  -3.53779   TCCGGAAAATACGAA               CTGAAA GTA CTTCAG               ACACGTAATGAAGCT  55 324
 STM474_2718 NONE
 STM474_2717 NONE
 STM474_2716 NONE
 STM474_2715 NONE
 STM474_2714 2750007 .. 2750017 -  -5.4  -2.72263   ATAGTGGTGGTAAAT                 GACA TAC TGTC                 TCCTTATCAGGTGGC  50 32
 STM474_2713 2749643 .. 2749657 - -12.8   -4.1043   GTTAAATACGATAAA               GGCCGC TTC GCGGCC               TTCTTATTACGGTAA 100 32
 STM474_2712 2748555 .. 2748569 - -11.4  -4.45068   ATTTGTAACAATAAA               GGCCTG AAT CAGGCC               TTTTGGGATGCTTAA 100 37
 STM474_2711 NONE
 STM474_2710 2747761 .. 2747780 - -16.4  -3.53343   AATGCCTCCGGGAAA            CCCCGGCC TTTA GGCCGGGG             AGCAGTCAAACATTC 100 15
 STM474_2709 2747051 .. 2747065 -  -7.1  -2.95787   CACGTAATATCAAAG               CTGCC GGGCT GGCAG               TGTTAGCCCACGGAG  59 124
 STM474_2707 NONE
 STM474_2706 2744688 .. 2744703 - -11.8  -3.48924   TGATTTTCCATAGAA              GCCCCG GAAC CGGGGC               GGACTGATAAGAGAG  88 43
 STM474_2705 NONE
 STM474_2704 NONE
 STM474_2703 NONE
 STM474_2702 NONE
 STM474_2701 2739767 .. 2739806 -  -2.7  -3.21099   TGTTCTCACCACGAA GCCGCACGACTCCGCAGGC GCAC ACCGTCGG-G-CGTGCGCC  AGAATATCCTGTTCT  45 52
 STM474_2700 NONE
        vtai 2738499 .. 2738528 - -12.9  -4.10161   TATTACCCCGTAAAA       CGACAAAACCGCC CGGA GGCGGTTCTGTCT        GAATCTGTTCTGTTG 100 41
 STM474_2698 2735106 .. 2735121 - -10.4  -3.62354   TTGTTAAACGAAAGA              GACCGG AAAT CCGGTC               AGTTTGTGAAGTTGT  78 24
 STM474_2697 2734803 .. 2734820 - -10.5  -5.24129   TGCCTCCATAAAAAA             GCCCGCC CGCA GGCAGGC              TTCAGATTCATTCAC 100 44
 STM474_2696 NONE
 STM474_2695 NONE
 STM474_2694 2730974 .. 2731008 -  -5.1  -2.95476   ATCAGTTATGACAGA     CAGGTCTTCTTCATA TTTGC TATAAATAAGGCCTG     AGCTTTCCTGACAAA  50 41
 STM474_2692 2729454 .. 2729470 -  -2.3  -4.74103   GCTTTAACCCAAAAA              CTATTAA GCA TTAGTAG              CAATGATGAATGTAA  68 64
 STM474_2690 2728221 .. 2728233 -  -4.1  -2.95068   TAATATATTTATATA                TAGAG CAG CCCTA                TTGGAGTTAAGGATA  46 182
        lepA 2724461 .. 2724473 -  -3.4  -3.64609   CAGAATCAGGGCAAA                CATG TTCGC CATG                CCAACTCCTTAGGGA  51 41
        lepB 2723448 .. 2723480 - -17.2    -4.015   TTATCCAGGAAATAA     TTCACGCTGCCG-CT AAAA AGACGGCAGCGTGAA      CGATCATTTCATCAC 100 43
         rnc NONE
         era NONE
        recO NONE
        pdxJ NONE
        acpS 2719325 .. 2719350 -  -3.3  -4.39329   ACTGTAGATAACAAA         TCAGCGCCAG AAAAGAG CTGGC-CCGA         GCAGAAAATAGGCGT  62 454
 STM474_2679 NONE
 STM474_2678 2716157 .. 2716185 -  -9.6   -4.0896   AAACTGGTTTGAAAA        TGGCTCTTCCGC CTCAT GCAGAAGAGCTA        TCAAGTTTATTGCGC  81 32
        murQ NONE
 STM474_2675 NONE
        yfhb 2712269 .. 2712281 -  -3.3  -3.02471   GCGGCATTATACACA                GACGC TAT GCGTT                TCACTATTCGAGCTG  45 29
        yfhC 2711377 .. 2711387 -  -3.2  -4.74103   CTGTTAAGCCAAAAA                 CCGT ATT ACAG                 TAAGCTAACCTACGG  70 347
        purG 2705933 .. 2705951 - -11.7  -5.24129   GCCGTCTACAAAAAA             GCCCCTC GTGAA GAGGGGC             TTAATGGCTATCGGG 100 45
        yfhK NONE
        yfhG NONE
        yfhA NONE
        glnB 2700865 .. 2700876 -  -5.8  -3.36991   GAGCAGCCCGAAAGA                GAGC GCCC GCTC                 GGTGCTGCGCGTCTG  56 525
 STM474_2660 2692696 .. 2692714 -    -3  -4.07687   ATTTGTGCCTGAAAA             GGCAGTCC GTG GGACTTCG             GCCAACAGTATAACC  56 100
        glyA 2691295 .. 2691333 - -12.5  -3.69621   AGGGAGAAGTTCAAA  CGGCAACGCCGCCGGA TAATGACT TCCGGCGGCGTCA-CG   TTATGGCGCATAAGT  95 90
        hcaT 2689928 .. 2689940 -  -4.7  -4.57073   CAGGCGTTTCAAAAA                GAGGG ATG CCCGC                GCGGCGTAGCGCTGA  71 148
 STM474_2656 NONE
 STM474_2655 2686773 .. 2686785 -  -9.1  -4.77438   ACGCACCAGTAAAAA                GACGC CGC GCGTC                GGCAAGCTCTTCCTC  93 290
 STM474_2649 2681249 .. 2681262 -  -3.9  -2.71681   TAATTTGGTCAACTA               TTTAC TTGA GTAAA                TTAGTCAGGTATTTA  45 65
        yfhP 2680479 .. 2680502 -  -2.4  -2.72144   TCATTGCTCTTAAAC          TCCGTACATC ACTC AATGCAAGGA           ATCAGGCAACCGGCT  40 171
        nifS NONE
        nifU NONE
        iscA 2678323 .. 2678349 -  -8.7  -4.30719   GCCTGTCAGAACAAA        CCCCACACGCAG GCGA CCACG-GTGGGG         TTATACCTTCTTACT  84 163
        hscB NONE
        hscA NONE
         fdx NONE
 STM474_2641 2675140 .. 2675161 - -15.1  -3.78775   TTCCTTATTAGCAAA           CGGGCCGCC GTAG GGCAGCCCG            TTAGATCTTTTGCTA 100 228
        pepB 2673793 .. 2673818 - -11.1  -3.12395   GCCATCAGGCAAAAT         GCCGGGT-GGCG CTT CGCTTACCCGGC         CTACAAAAACACCGT  76 41
        sseB 2672480 .. 2672495 - -10.4    -5.626   CAGGCCACAAAAAAA              CCGCTC AATT GAGCGG               TTTTTTTGTGCTGGT 100 478
 STM474_2637 2671224 .. 2671236 -  -9.1  -3.53012   TCCTGGCGCGCTAAA                CGTCC CGT GGACG                GAACTGGTGTATGAG  68 390
 STM474_2634 NONE
        pbpC 2663105 .. 2663121 -  -3.1  -4.59853   GTAATTCCGGAAAAA              TTAATAA TTC TCATTAA              CTTTAAATTAAATGA  66 67
 STM474_2632 NONE
 STM474_2631 NONE
 STM474_2630 NONE
 STM474_2629 2658303 .. 2658313 -  -2.6  -3.09878   TGGATGCAGGTAACA                 TTTT TTT AAAA                 TAAAATGAGCATTAG  43 50
         ndk 2657637 .. 2657669 -  -4.1  -5.04249   GGTTGAAAAAAGAAA     CGCCCC-GG-TAAGC TTACT GCTCGTCCGGGGGCG     CTGCATTGTACAAAT  76 142
        yfgB 2656230 .. 2656240 -  -6.8  -3.50045   AGTCAGACAGTATAA                 GCCT GTC AGGC                 CGCAGATGACAAAAC  62 198
        yfgA NONE
        ispG 2653943 .. 2653963 - -13.3  -3.00298   GGGTTCAATCATACA            CGGGAAGCG CGC CGCTTCCCA            TCACGTTCTTATTTT  86 34
        hisS NONE
        yfgM NONE
        yfgL 2650717 .. 2650737 - -11.1  -4.60746   TTAAAAACAGGAAAA            CGGCCCCTA CAC CAGGAGCCG            TTTTTTAAAACACAC  95 52
        engA 2649124 .. 2649151 - -10.6  -3.60296   TACTTTTACTTGAAA        GGCCTGA-TAGCG CAG CGCTTGTCAGGCC        TGGAATATTACTGAA  83 47
        yfgJ 2648752 .. 2648762 -  -4.6  -4.59946   AAAAGAATAAAATAA                 CCGC CGG GCAG                 GATACTATGCTGATA  71 126
        sinH 2646292 .. 2646322 -  -6.9  -3.04398   CCTTTTTCTCAAAAT      TCAGCGGC-TGGCT GGTC AGCCACAACGCTGA       CGCTATTTCTGACTA  58 28
        sinI 2645271 .. 2645294 - -15.4   -4.0896   AAAGTGCGCGGAAAA          TACCACTCCC CGCG GGGAGTGGTA           TGTTGAGGACAACTT 100 39
        ratA 2639271 .. 2639285 -  -5.6  -2.62983   GGGATCGTTACACTA               TCGGCC TGA GGCGGA               GTGCCATTAATAGCC  50 331
        shdA 2625272 .. 2625294 - -14.1  -4.08216   TCATTCGCCTCAAAA           CCGGGCAGG GAACA CCCGCCCGG           TTTTGTCTAACTTAC 100 37
        imdH 2622138 .. 2622161 - -13.9  -4.56113   AACAGATTAAATAAA          TCGCCCGAC ACGAAG GTCGGGCGA           AGAAAATCAGGAGCC 100 32
        guaA 2620453 .. 2620472 - -12.2  -5.42975   GCACATAAATAAAAA            CCCTCTGT AAAA ACAGAGGG             TTAAATTCACCTTTA 100 74
 STM474_2610 2619696 .. 2619714 -  -4.6  -4.58085   ATATTGAGAAAGAAA             TTATCGAT TTT ATCGATCA             GGAATATAACACTAA  71 319
 STM474_2607 2618637 .. 2618664 -  -2.1  -4.96388   AATTATTAAACAAAA        GTAACATTTGA TTTAAG TCAATTATTAC         CTTTCTCCTGCAGCC  69 180
 STM474_2606 2616268 .. 2616305 -  -9.1  -2.71924   GATCGCCGCGTAAAT   TGT-GAGCCAGACGCCGC GCC GCGGCGTCTGTCTTTACT   GAATCTCAGATAATA  66 21
         upp 2609712 .. 2609730 -   -11  -5.81412   TTTATTCAAAAAAAA             GCCGACTC TTA AAGTCGGC             TTTTAATTATTTATT 100 44
        uraA 2608344 .. 2608364 - -18.3  -3.58726   TCCCGTGAGATAGAA            CCGGGCAGC ATC GCTGCCCGG            CAACCCGTTACTGAT 100 33
        yfgE 2607432 .. 2607460 -  -8.1  -3.09327   TGAGCTGAGTGAAGA        GGCGTTAATCCAG GCG CTGGTTGAACACC        CTAAACTGATGGAGC  60 141
        perM 2604284 .. 2604303 -  -9.3  -5.18726   TTCCGACAATAAAAA            TGCCGCA ACACGG TGCGGCA             TTAAAAAAAAGAGCG 100 134
 STM474_2595 2603829 .. 2603857 -  -8.8  -3.10843   GAAAACGCGTAAAAG       CCTCAGGCCGCGC TGAT GTGCGGCCTG-GA        AAGGGAATGCGCCGT  66 40
        dapA NONE
        nlpB 2600681 .. 2600700 - -11.4  -5.31275   TCTTATCAGAAAAAA            GGGCCGGA TTGC TCCAGCCC             TGTTAAATTACTTGT 100 33
        purC 2599786 .. 2599807 - -11.5  -2.90054   GAGGAAAGGATGATA           CCGGAGAGC GGTT GCCCCCCGG            TCAGAAGCGGAATTA  78 38
 STM474_2589 2598806 .. 2598817 -  -2.2  -2.64735   AGCGCATCGATATCA                GACA TCCC TGCC                 CCGGTTTATCAAAAG  39 34
        ypfI 2596776 .. 2596801 - -11.2  -2.64973   AGTAACCGGATATCA         TGCCGGACAG GTATCG CTATCCGGCA          TGGTCCCCACCGCCG  77 16
        aegA 2587179 .. 2587191 -  -9.1   -3.5393   ATCAGGCCTGTTAAA                CGTCG CCC CGACG                GGAAAATGTTTATCG  73 165
        yffH 2584786 .. 2584797 -    -3  -3.53012   TCTTTTTTGTGTAAA                GAAA TATA TTTC                 TTTTTTTTCAGTCCA  48 33
        ypfG 2583641 .. 2583656 -  -5.4  -3.11955   ACAACCAGGATTCAA              CGC-GTG ATC CACAGCG              TAGGCCAGGCATCCG  52 6
 STM474_2578 2583238 .. 2583278 -   -12  -3.12449   CGTTAGCAACACAGA  CTTTGCACAGTCTGCAGA CCTGT TCTGTAGGCTGTGCAAAA  TTACTTCGTAGACTC  81 26
        maeB 2577655 .. 2577672 - -12.7   -5.4251   TCCATAGACAAAAAA             GCGCAGG AGAA CCTGCGC              CAGAAGAGAGAGTAA 100 48
      tnpA_2 2576946 .. 2576966 - -12.5  -3.88703   GCGCATAAATAAATA            TCCTCCGGC ATA GCCGGAGGT            TTTTCAGATGCGCCT 100 106
        eutS 2576231 .. 2576245 -  -2.9  -3.15861   CATTACCGCCACCAA               TTAAC TTTTT GTTAA               CTCACACAGGGTAAA  45 11
        eutP NONE
        eutQ NONE
        eutT NONE
        eutD 2573240 .. 2573257 -  -2.6  -2.83403   TTCCTCTCATTAAAG             GGGTCC AGAACG GGACCG              TTCATTCAACCAGTG  41 27
        eutM NONE
        eutN NONE
        eutE 2571121 .. 2571131 -  -6.8  -3.48924   TCATCCCTTATACAA                 TGCG AAA CGCA                 TCCACCAGCACGCAT  62 7
        eutJ NONE
        eutG 2569000 .. 2569027 -  -7.6  -3.57144   TTTTTGATTTGTAAA        CCGGATAAGACG TTTA CGTCGCCTCCGG         CATTAACGCCGTGTT  67 84
        eutH NONE
        eutA 2566332 .. 2566349 -  -4.1  -2.58544   CTTTAGTTTCATAAG             TCGTTCC CTCA GGAAGGA              AATGCGAGTGATTTC  44 16
        eutB NONE
        eutC NONE
        eutL NONE
        eutK NONE
        eutR 2561755 .. 2561769 -  -4.2  -2.52834   CACGTTATCAGCAAC               CGGAGA GCC TCCCCA               TCAATATCAAGCCCA  44 32
 STM474_2552 NONE
        yfeZ NONE
 STM474_2550 2556265 .. 2556282 - -11.3  -3.68359   TCCTGAAAATGAGAA             TGCCACG CAGT CGTGGCA              TTAATGGAGGCTATT  87 81
 STM474_2549 2555224 .. 2555241 - -12.7  -5.48825   TATTAGGTAAAAAAA             TCCCCGC GGAG GCGGGGA              TGGGCATTTTTATGC 100 128
        ucpA 2554277 .. 2554304 - -12.8  -3.84992   AAGGGAATAAGAGAA        TC-CCTCCCCACG CGG CGTGAGGAGGAGA        CCGGCATCAATCAGA 100 36
        cysP NONE
        cysT NONE
        cysW NONE
        cysA 2550298 .. 2550323 - -13.3  -5.02074   TCAGCTCGTAAAAAA         GCCCGGTATGCG TAG CGC-CACCGGGC         GATAACTATACAAAT 100 48
        cysM 2549372 .. 2549391 -    -2  -3.62275   ACTCATTAGTTTAAA            TCCCTGCC CCCT GGCTGAAA             TGCTCTTCACCAAAC  49 1
        pdxK NONE
 STM474_2537 2544905 .. 2544922 - -12.7  -3.67597   TGCCGCAGTGAAGAA             TGGCGCC TTTG GGCGCCA              TTTTTTTGCCTGTAC  95 137
 STM474_2533 2541947 .. 2541962 -  -6.1  -5.08011   AAAACGCGTAAAAAA              GCACC TTTTTG GGTGC               TTTTTTGTGGCCTGC  83 100
        zipA 2538756 .. 2538772 - -10.8  -5.38249   ATCAATGATAAAAAA              CCCCCG ACAGG CGGGGG              TTACGTTAAAAATGT 100 57
        ligA NONE
 STM474_2528 2536316 .. 2536345 -  -4.1  -5.40072   GCGGTTCGAAAAAAA       GCCTGGCCAACGG GATC CCGATGGCCAATA        TTCTGTTTCCGACGT  86 177
        yfeR 2534431 .. 2534452 - -10.1  -3.09273   CTGTTTTAACACACA           GCCCTGTCA AAAA TGGCAGGGC            AAGACCGCACCTCAC  73 59
        xapA 2532545 .. 2532559 -  -9.2  -4.03234   TTGCCGTGAGATAAA               GCCCCA ATA CGGGGC               CGTAGTCATTGTGTT  80 40
        xapB 2531227 .. 2531256 -  -8.6  -4.82901   CCTTGTTCATAAAAA       TGGACTGGCGAA CATCCT CTCGCCAGTCAA        ATAAAATTAATGTGC  89 32
        xapX 2531042 .. 2531052 -    -4  -2.82933   CTGGAATTTACCATA                 TTAC CTA GTAA                 AAAATAGATTTAACG  45 19
        xapR 2529957 .. 2529971 -  -9.2  -5.17576   CACCAATGTAAAAAA               GCGCCC TAA AGGCGC               TTTTTTGCTATCTGC  93 164
        gltX 2527833 .. 2527861 - -13.3  -4.24413   CGGACTAACAAATAA        TAAACGGCAGG CGTCTGC CCTGCCGTTTA        TTCTGTTTCAGCTGG 100 43
        yfeA 2524242 .. 2524259 - -12.7  -3.97368   GGTTTAATGCAGAAA             CCGGGGA GCTA TCCCCGG              TTTTTTTATGCCGCT 100 40
        mntH 2521393 .. 2521417 - -12.2  -3.38812   TCCTGCTGAATAACA         GCCCGATGACG CCCA CG-CATCGGGC          CTGCTATCTTTCTGT  85 43
 STM474_2506 2517773 .. 2517801 -  -9.6  -3.53444   TTAGCCGTCGTCAAA       CTCGCCG-CGC TGGTCATC GCGGCGGCGAG        CGGCTTTCGCGGCGG  71 328
         glk 2515555 .. 2515571 - -13.7  -5.64006   AGGCAATGAAAAAAA              CCGCGTG AGG CACGCGG              TTTGAGACTGACAAG 100 134
 STM474_2503 2515100 .. 2515122 -  -3.5  -3.93177   AAAAAAGAGGAACAA           GCGTAAAAA CTTAC TTTTTAAGC           GTGTCAGTTATAGCA  55 204
        yfdZ 2513692 .. 2513711 - -13.6  -5.33026   CAATGCAAAGAAAAA            CAGGAGCC ATGG GGCTCCTG             TTTGCTTTTCTACTC 100 35
 STM474_2500 2511748 .. 2511758 -    -4  -3.91473   AGAAATGTCCATAAA                 TAGA TCA TCTA                 TAATACCTCCTGTCT  57 183
 STM474_2499 2511264 .. 2511282 -   -16  -3.65812   TCCTGGGGAACAGAA             GCGCCGAC ATT GTCGGCGC             TATCTATTCACTGGC 100 256
        pgtC NONE
        pgtB NONE
        pgtA 2504933 .. 2504946 -  -2.4  -2.71364   TTATCTGGCTAACGA               CATC GTTGCT GATG                TTGTCAGCCAGATTG  40 56
        pgtE 2503729 .. 2503760 -  -8.7  -4.72986   TACGTTCAGCAAAAA      GTCGTCATCGGCC GGTTAT GACCGATGACATC       CCGATGTGGTCTAGA  89 36
        vacJ 2501443 .. 2501461 -   -11  -4.78764   GAAACGGATCAAAAA             GGTGAGCA TTG CGCTCACC             TTTTTATTTACTGCC  95 43
        yfcZ 2499409 .. 2499445 -  -9.4  -5.66684   GAAGCGACAAAAAAA    GAAAACGCCTCCGCCA GATGA TGACGGAGGCGTCGTG    AATGAACGGATTAAC 100 36
        fadI NONE
        fadJ 2495682 .. 2495695 -  -3.1  -4.56597   TGGCTGCGGCAAAAA               TG-CGG TGG CCGGCA               TTGTGCCTTATCCAT  64 151
        sixA 2494961 .. 2494974 -  -9.5  -2.84325   GGCGCCGAAAGAGTA               CGGCG GCGA CGCCG                CGCTGCTGGTGTTGA  64 178
        yfcB NONE
        aroC NONE
        mepA NONE
        yfcA NONE
        yfcM NONE
        yfcL 2489727 .. 2489754 - -11.2  -3.08798   ATGGGTCAGTCAATA        GCGGAAGGCGGC AAGC GTCGCCTTCCGG         CCCACGGCGTTATTG  79 35
        fabB 2486284 .. 2486303 - -13.6  -5.26875   CCCTGAATGAAAAAA            CAGGTCGC ATTA GCGACCTG             TTTCATTGTTGATAC 100 60
 STM474_2476 2485323 .. 2485361 -  -5.3  -4.82901   CTCGGCGGAGAAAAA  GTGGATGTTCTGTTGGCT ACAG AGTCAAC-GCCCATCCAC   CTGGAAGTTTATACC  76 248
 STM474_2472 2483503 .. 2483539 -  -8.6  -2.60212   GCATTACTCCAGAAT    GCAGAGTAAGGCGGGG AAAGG CCACGCCCCCCTCTAC    CTGAACGTCAGGATT  63 153
        yfcj 2482098 .. 2482112 -  -7.1  -3.58536   AAATTCAGCCGCAAA               CGGTG CTGAC CACCG               CCCAGGTGCAGGATT  67 222
        pdxB 2480029 .. 2480058 - -11.5  -3.80279   TCCAGAAATACATAA       GCGTCCCTGTCGCA TTA TTCGACAGGGA-GC       ATTAAGAAGACATTA  91 38
         usg 2478993 .. 2479010 -  -4.1  -2.62184   GCTGTCCGGACATCA             GTACAGA TACT CCTGCAC              CAGCTTCTCCGCAAT  44 5
        truA NONE
 STM474_2466 2477446 .. 2477458 -  -3.3  -5.24531   ACTTTGGATAAAAAA                GTGGT CGA ACCGC                TGAGTTACTTTCTAT  77 37
        accD 2476368 .. 2476400 - -17.1  -3.06515   CTTTACGGTGAAAAG      CAAAAGGGCAGAGCC TGC GGCCCTGCCCTTTTC      AGTTATCAGGCCTCA 100 31
        folC NONE
        dedD 2474368 .. 2474401 -  -2.3  -2.52519   TTACCAGATGAACAC     CG-TAGGCCTTAACGC TGC GCGCTCAGGCAAAACG     CGCCTTAGTTCGGGC  39 30
 STM474_2462 NONE
        cvpA NONE
        purF 2472017 .. 2472048 -  -9.4  -2.52464   GTGGTGCGTAATTGA      CATCGGCCAGCGGCA TTG CGCCGCTGGCAAA-G      CCATTAGCCTTCGTT  68 29
 STM474_2458 NONE
 STM474_2457 NONE
 STM474_2456 2466333 .. 2466357 - -14.9  -2.62613   CGTGAGGTCAAAGAT          GCCGCCGCGAC ATA GCCGCGGCGGT          TATGCGTTAACGCGT  89 32
 STM474_2455 NONE
        ubiX 2464247 .. 2464265 - -13.2  -4.37092   ATCGCGGTTACAAAA             TTGCCCTG AAA CAGGGCAA             CAGGGACAATAATGC 100 58
        argT 2463060 .. 2463093 - -14.7  -2.77899   TCGTGCCATTAATCA     GGCCGACAAGGCAAA GCAT TCTACCTTGTCAGCC      GGTTTATTTTGCATA  89 159
        hisJ 2462087 .. 2462098 -  -7.2  -2.62184   TTTTGCCTCACATCA                CGCC GGAT GGCG                 GCTGTGCCTTGCCCG  57 134
        hisQ NONE
        hisM NONE
        hisP 2459724 .. 2459736 -  -9.1  -4.07568   CGGGCGCTGCCAAAA                CGGCT TGA AGCCG                CCGGATTCGCATTTC  80 136
        yfcF NONE
        yfcE 2456663 .. 2456679 -  -2.9  -2.73124   CCGTACTTGCCAAAC              GACGCTG TTC CACCATC              AGGAAACCTTCTTAT  41 81
 STM474_2443 2456064 .. 2456093 - -10.1  -3.74224   GTTAAATCAGGGAAA       CTGGA-GCGATCGA AAA TCCATCGCCTCCAG       TTTATGTATGCGGGA  80 56
 STM474_2441 NONE
 STM474_2440 NONE
        ulaA NONE
 STM474_2438 NONE
 STM474_2437 2450824 .. 2450852 - -11.8  -4.20084   ATCATTGATCCAAAA       TGCCGGATGAGCA TCAG CGC-CATCCGGCA        ATATCTCCATGATTA  95 38
        yfbV 2444815 .. 2444834 - -10.8  -5.52384   TGGCGATGAAAAAAA            GAAGGCAT TGGT ATGCCTTC             TTTTATATGCGTAAT 100 51
        yfbU NONE
        yfbT 2443585 .. 2443602 - -14.1  -2.70946   TTCTGCCATAAATAT             GCCCCGC CAAA GCGGGGC              GATATCATGATCAGG  87 36
        yfbS 2441314 .. 2441335 -  -4.3  -5.10497   AAGCGATCGAAAAAA           TCGCCCAGC AAAA GCTGGTTGA            TATGGCGCCGGATGA  80 400
        lrhA 2437769 .. 2437802 -  -9.6  -5.61596   ATGGGCACAAAAAAA     GAGCCACTGAGCGTT TTTTC ATCGC-CAGCGGCTC     TTTTTTACATTTACG 100 64
 STM474_2426 2437301 .. 2437319 -  -2.4  -6.13503   GAGGAATAAAAAAAA             CCCTACAA TTA CTGTAGAA             AATGATAAAAACAGC 100 315
        nuoA NONE
        nuoB NONE
        nuoC NONE
        nuoE NONE
        nuoF NONE
        nuoG NONE
        nuoH NONE
        nuoI NONE
        nuoJ NONE
        nuoK 2427209 .. 2427224 -  -2.5  -3.18199   TAATGGTTAAGGCAA              GCATG TTCATC CACGC               ATCTCACTTACTGAA  45 16
        nuoL NONE
        nuoM NONE
        nuoN 2421978 .. 2421994 -  -9.5  -3.29829   CACAGGTTTTCATAA              GTTGGAT GCA ATCCAAC              ATTTAGAGGCTCAGG  74 101
 STM474_2412 NONE
        yfbK 2419366 .. 2419396 - -18.4  -3.05715   AAGCGCCTGACGTAA       CAGGGGATGCCTAC AGT ACAGGCATCCCCTG       ACGCTTAGTGAGACA 100 30
        elaA NONE
        elaB 2416415 .. 2416431 -  -6.5  -4.56597   CCTCCCTGTTAAAAA              CCCCACA TTA TACGGGG              TACTGCCCTAAAAAA  76 88
        menF NONE
        menD 2413349 .. 2413364 -  -4.7  -3.00923   GTGCAACATCATAGA              TGGCT TACCTG AGCCA               AAAGTTGCTGCAACG  49 3
        yfbB 2412601 .. 2412611 -  -5.4  -3.41125   GTCAGAGACGCAGAA                 TCTG AGC CAGA                 CTGTCTACCACGCCA  56 1
        menB NONE
        menC NONE
        menE 2409325 .. 2409339 -  -2.1  -3.21924   TGATTGTTCATAACA               CGTTA CACAT CAACG               GATAAACAAAACGGC  44 75
        pmrD NONE
         ais 2400515 .. 2400535 -  -8.9  -2.64616   TTCTGAGCGATATTA            CGCCGTGGA CCT TCCGCGACG            ATATCCGTATTAAAA  59 273
        yfaZ 2399498 .. 2399515 -  -9.1  -4.30576   CCGTTAGCATCAAAA             GCTGGCG TTTA CGCCAAC              ATAAGGGCCGTCAGC  85 2
 STM474_2389 2398111 .. 2398145 -    -5  -2.92398   AAAAAGCAGATGATA    TTGCCGGATAATGGC ATAGCG GCC-TTATCCGGCTC     ACGATGTCGTTCCCA  50 61
        yfaX NONE
        yfaW 2395882 .. 2395893 -  -4.4   -3.1978   ATGCTCATAGCAATA                TCCT CAAC AGGA                 TGAGGGCGTTGCCGT  50 62
        yfaV 2394592 .. 2394602 -  -2.4  -2.86582   AGATAAGATTAATGA                 TGCG CAG CGCC                 GGATTGCGCCACCGG  41 8
 STM474_2385 NONE
 STM474_2384 2393542 .. 2393566 - -14.3  -2.77104   TTATAAGTATATAAG          GGTGGGAAGGC CAG GCCTTCCCACT          AAAAGTTCTATGCCG  87 33
        glpT NONE
        glpQ 2385179 .. 2385231 -    -9  -3.54543   ACTTACGCTGGCAAA CGTTGCGCCAGGCCGGATGAGG CGTTTATGC CCTCATCCGGCGCGTCACTTCG ACTATGGCAAACCTT  73 40
 STM474_2376 2382849 .. 2382874 - -16.3  -2.87931   TCCAGCCGGGAGAGA         TTTTGCCCTGC TGCT GCAGGGCAAAA          GGCGATATCGAAATC 100 51
 STM474_2370 NONE
 STM474_2369 2374265 .. 2374286 -  -2.3  -3.14132   GGGCCTGGCCAGGAA           GAGGT-TAGA AAA TCAATACCTC           CCGTGTATACCCGTC  44 212
        gyrA 2371393 .. 2371410 - -14.1  -5.29846   AACGGCAAAGAAAAA             GGGCCGG ATAT CCGGCCC              TCGCACAGCAATAAC 100 42
        rcsC 2367979 .. 2368006 -  -9.8  -3.75024   TCTGACCATGAACAA        CAACCCGGCGAT CCTG AGCGCCGTGTTG         GATCTTGATATTGAA  79 482
        ompC 2363124 .. 2363137 -  -9.5  -5.18357   TAAGGCATGAAAAAA               GGGCC CGCA GGCCC                TTTAGCAACATCTTT 100 47
        apbE NONE
         ada NONE
        alkB NONE
        yojI 2358170 .. 2358182 -  -5.5  -3.28924   GATGCTGCGCTACAA                CAGCA AGC TGCCG                ATCGTGGTGTATACC  52 321
        napF NONE
        napD NONE
        napA NONE
        napG NONE
        napH NONE
        napB NONE
        napC NONE
        ccmA 2350766 .. 2350785 -  -6.3  -2.86177   ACACGCCACATCACA            GCCCGGC CCCCCC GCCGGTC             AGCGCCAGGCGGCGG  55 1
        ccmB 2350086 .. 2350112 -  -2.9  -4.39386   CTGAAACCAGTAAAA        TGTCCGTCGCGC CGGG GCGCTACTG-CA         CGCTGAGGCGCAGCG  60 18
        ccmC 2349310 .. 2349322 -  -6.2  -2.50493   TCCACGATGAAAATG                CCGG ACTCA CCGG                TGCCCCCTTTTCAGT  53 19
        ccmD NONE
        ccmE NONE
        ccmF NONE
        ccmG NONE
        ccmH 2345069 .. 2345102 - -20.3  -3.75105   GGAATGCAGTAACAA     GCCAGGCCCGGTGGCG CCG CGCCACCGGGCC-GTC     AGGGTCTTATTTCTC 100 32
 STM474_2341 2342705 .. 2342722 -  -8.4  -4.08064   AATTCCCCTTGAAAA             CCAGCC TGTCAG GGCTGG              TTTTTTTATGCCTAC  77 428
 STM474_2339 2341493 .. 2341505 - -10.5  -3.10344   CTCTGATTTAAGATA                CGCCG CAT CGGCG                AATAATGTGTCATCT  73 156
 STM474_2338 NONE
 STM474_2337 2341000 .. 2341012 -  -3.4  -2.73543   AATTTACATATAGTA                TCTG TCCGG CAGA                CATCATCTCTTCCTG  43 149
       sspH2 NONE
 STM474_2335 NONE
 STM474_2334 NONE
 STM474_2333 2336873 .. 2336899 - -15.3    -3.767   CATTCATCCAGTAAA         TAATACGCCCC TGCAT GGGGCGTATTA         TTAAACGTCCATATC 100 26
 STM474_2331 NONE
 STM474_2330 NONE
 STM474_2329 NONE
 STM474_2328 2332405 .. 2332418 -  -3.1  -2.63381   TAAAGCCTGAAAGAT               TGCGCC ACC GG-GCA               GAGAGGTATAGATCC  42 157
 STM474_2327 2331660 .. 2331714 - -11.1   -4.7629   TGAGGAAGTGAAAAA GCAGATTT-CAAAATAAACAGAGGGG CTTG CCCCTCTTTTTATTTTATAAAACTAC AACAATAATGCAAAT  95 40
 STM474_2323 2328624 .. 2328640 -  -9.4  -3.65581   AGCAACGGGGAATAA              TCGGGG AAAAA CCCCGA              CACAAAACATCGACT  77 62
        yejK NONE
 STM474_2318 2324456 .. 2324471 - -11.8  -5.10208   GAAGTTGAAGAAAAA              CCCCGC CCCG GCGGGG               TTTTTTTATGCGTTT 100 96
        rsuA NONE
         bcr 2320146 .. 2320187 -  -7.3  -2.63596   GTGTAGCGGATAGCA TCCCCCAACGCCGCC TGCGCATTCTTC GGCGCCATTGAGGGA  CAGCGCGCCCGTCAC  57 37
        yejg 2319032 .. 2319051 -  -3.4  -3.71924   CAAATTATCGAAGAA            GGCCTGCG CGTC CACCAGCC             TACGCTTTCAGGCGC  51 438
        yeiW 2307546 .. 2307564 -  -4.6  -3.42257   CGGTAAATACATCAA             TGATAGAT ATA AACTATCA             AATTCATGATATCGA  52 323
 STM474_2301 NONE
 STM474_2300 2306481 .. 2306497 -  -2.1  -3.19602   CGCTGTATACCAATA              CCATTCG CGT CGGCTGG              ATCATTGCCGGTTCG  43 213
        fruF NONE
        fruK NONE
        fruA 2301261 .. 2301278 - -11.3   -5.4833   TCAGGCAATAAAAAA             GGCAGAG CGCG CTCTGCC              TTTTTTAGCGTGTTT 100 44
 STM474_2293 2300198 .. 2300213 -  -3.2  -5.09225   AGCGCATTGAAAAAA              GCGG GGGCGAAA CCGC               TGCTGATGGCGCTGG  76 85
 STM474_2291 NONE
        yeiE 2298228 .. 2298241 -  -3.7  -4.80882   AGCGGATACTAAAAA               TGGCG ATGC CGCCC                GGGCAGCCCTCCTCT  71 47
        lysP 2296510 .. 2296527 - -11.3  -6.07374   AGAAAAAACAAAAAA             CCCTCTC GAAT GAGAGGG              TTAGAAGAGTCAGGT 100 102
        cirA 2294228 .. 2294262 - -16.4   -2.5294   CATCGGTTATAACAT     TCTGGCGACAGCGGCA AAA CGCGGCTGTCGCCAGT     CTCTGTCAGAAACGG 100 31
 STM474_2285 NONE
 STM474_2284 2289769 .. 2289782 -  -8.1  -2.60392   TAGCTGCGAATTAAT               GCTGG CCAG CCAGC                CGCAGGACGCCATTC  56 247
        folE NONE
        yeib 2286947 .. 2286959 -  -3.4  -3.85698   GGGCTGCGTGAGAAA                CATC ACAGG GATG                GAAACGGTTACAGCC  53 69
        galS 2285785 .. 2285802 -  -6.3  -4.21989   CACAATGTTAATAAA             CTGTGAA TTTA CTCACAG              ATTGAAAACGGTTAC  70 54
        mglB 2284229 .. 2284250 -  -3.7  -2.70932   CGGCCTTTTTAATTA           TGACTATCCG CGC CGGATGG-CA           AAAGAAATACGTTAT  45 109
        mglA NONE
        mglC 2281593 .. 2281621 - -10.2  -3.14211   AGCTCTCGGTATGAA       GCCCGGCGC-GCA GTTT CGCTGCGCCGGGT        TATCTGATAAGCAAG  74 58
 STM474_2268 2273102 .. 2273114 -  -3.3  -2.89881   GATTTATTTCAGACA                TGGAG ATT CTCCT                TATTCGTTTACGACG  44 25
 STM474_2267 2272072 .. 2272082 -  -2.4  -3.81146   CTCCCTAATTAATAA                 CGTG CTT CGCG                 GAACAGCCCCAGGGC  51 8
 STM474_2266 NONE
 STM474_2265 NONE
 STM474_2264 2269401 .. 2269421 - -11.9  -5.58454   TCCACAGCAAAAAAA            GAGGCGCTA TCA TAACGCCTC            TCTGCGATGAGCAAA 100 91
        yohI 2268162 .. 2268179 -  -6.3  -2.50575   AAAAGTCCCACTAAC             CCGTTCA TAAA TGAACGA              TTTTGCTGCAATACG  48 286
        yohG 2266535 .. 2266550 -  -3.2  -2.71011   ACCCTGTCTGAATCA              TCCGGA AAAA TCAGGA               ATGATAACCGCCGCC  43 20
        yohF 2265695 .. 2265709 -  -4.9  -3.32963   ATCCGGATGGCATAA               CGCCG CCATC CGGCA               CCCGGCGTTTATTTT  54 34
        yohC 2264274 .. 2264294 -    -9  -2.79302   AGCAGTGGCATCATA           GCGGC-ACG CCAG CGTTGCCGC            TACAGAAGAATCGTC  66 85
        pbpG 2263061 .. 2263079 -  -3.7  -3.88787   GGACATCTGTATAAA             GCGCCGG AAACG CTGACGC             GTTTTTATCGGCAAA  56 187
        bglX 2258856 .. 2258874 -  -8.8  -2.88663   AGTCATTGCCAGACA             GGGCGC TGCTATC GCGCCC             TGTTGACGGCAGGCT  65 40
        yehZ NONE
        yehY NONE
        yehX NONE
        yehW 2254740 .. 2254750 -  -6.8  -4.37092   ATGGTGCGGAGAAAA                 CCAG ACG CTGG                 CGCAGCAGCAGCAAC  74 238
        yehU NONE
        yehT NONE
        yehs 2250442 .. 2250459 -  -2.7  -3.34102   CGATCAGAAAAACGA             TACTCTC CAGG GAAAGCA              AAATAACATGACAGC  47 512
         mrp 2246115 .. 2246150 - -17.2   -3.1478   ATTATTTTATTAATA    CATTCACTGCATCAAT ATAT ATTAATGCAGTGAATG     TCATATTCTCTTTGG 100 56
        yehE 2245574 .. 2245603 - -18.1  -5.82036   ACAACAAATAAAAAA       GCCCATATCATTG ATAT CAATGATATGGGC        CTGCGGAATTAATAA 100 44
        stcA 2244784 .. 2244803 - -12.8  -5.24129   CTTGCTTATAAAAAA            CCGGCGAC GAAC GCCGCCGG             TTGAATAAATTAGTC 100 35
        stcB 2244030 .. 2244061 -  -2.3  -4.70772   ACAGAGTCAATAAAA      CAAGCGAAGCGATG GGCGT CATC-CTTAGCATG      ATGAACTCCTGTTTA  64 38
        stcC NONE
        stcD 2240291 .. 2240311 -  -8.2  -5.64274   TCATCGATAAAAAAA            GCCCCCTC ATCCA GAGGGGGA            AATACAGCCCCATGT 100 262
        thiM NONE
        thiD 2237980 .. 2237992 -  -4.8  -2.66964   GTAGGCAGTATACTA                CCAC CACGC GTGG                AAATGATGTACCGGA  48 10
 STM474_2232 2236939 .. 2236980 -  -5.1  -3.59315   CGAAGCATGGGTAAA CCG-CTTTTCCGCGCCGC TGGTGGT GCGCCACGATAAAGACGG AGCGTGGTATTTTAG  55 240
        fbaB 2232197 .. 2232211 -  -8.5  -3.99805   CCGGAAAAACTTAAA               GCCGC ATTGG GCGGC               GTCTCCTATCTTATC  74 495
 STM474_2226 2231379 .. 2231398 -  -3.6  -4.15222   ATGTTTGGTAATAAA            TATCAGGT TTTT ATCTGATA             TTATGGTGTTTGAAA  57 156
 STM474_2225 NONE
 STM474_2224 2230230 .. 2230242 -  -7.7  -3.72742   TCATTATGAACACAA                GCAGT TTA ACTGC                CAGTTCTTGGAGGTA  71 77
 STM474_2212 2211690 .. 2211704 -    -5  -2.79209   TAATCACTAAGAGTA               TCACCA GTA TGATGA               CTACCTTCATCATAA  49 117
        alkA 2208904 .. 2208917 -  -3.7  -4.08767   GCGACTCTGCGAAAA               CTGCG GCAA CGCGG                CTGCCAGGTGATTCT  60 312
 STM474_2208 2205966 .. 2205977 -  -3.6  -2.71712   GGGGGGCGCCGAAAC                GCCA AACG CGGC                 AATTATAGGGATTTC  43 39
         udk 2205209 .. 2205234 -  -2.6  -3.14132   CCTTTCGCGCATCAA         GCCCTTAA ATCAAGCACA TCAAGGGC          TAACCAGGTTATCAC  45 65
         dcd 2204579 .. 2204596 -  -2.6  -2.53263   GCTACCCTCAATGGA             CCGGCA GTATTG CGCCGA              ATGGCTCAGTCTTTA  40 31
        asmA 2202387 .. 2202399 -  -6.2  -3.83026   TTCCTGGACAGCAAA                CGGC CATAT GCCG                CTGGAGGATTTGGTG  63 333
         wza NONE
         wzb NONE
         wzc NONE
        wcaA NONE
        wcaB NONE
        wcaC NONE
        wcaD NONE
        wcaE NONE
        wcaF 2191456 .. 2191473 -  -4.1  -3.54424   TTTCATTTCCTCAAA             TAGTCCC GTTA GGGAGTA              ACTTTCTGAACGCGC  52 16
         gmd NONE
        wcaG NONE
        nudD NONE
        wcaI NONE
        manC 2186207 .. 2186231 -  -3.5  -3.30124   GCTTACCGGGCATAA          TTGCAGGCG TCAGACC CGCCCGTAA          CGATCCTCGAACCGC  48 10
        cpsG NONE
        wcaJ 2183227 .. 2183242 -  -4.6  -2.60508   CAGCGCGGAAAAACC              GGAGCG TACA CGCTGC               CCTGGTGCAATATGG  46 70
        wzxC NONE
        wcaK NONE
        wcaL NONE
        wcaM 2177722 .. 2177732 -  -2.6  -3.14211   ACTTTTTCCCAGGAA                 TTTT CGT AAAA                 ATAGCGGTACTTACC  45 36
        galF 2176578 .. 2176629 - -10.1  -4.75518   TATACAAAACTAAAA CGGCAGTCAACACTCGTTTCAGC CAACTT GCCGCTTCGAATGTTCACTGCCG TTATTATGTTTATCA  91 68
        rfbB NONE
        rfbD 2174287 .. 2174300 -  -8.1  -4.55287   CTCATTCATAGAAAA               TGCCC TGAT GGGCA                TTTAAATTTATTAGA  82 36
        rfbA NONE
        rfbC NONE
        rfbI NONE
        rfbF NONE
        rfbG NONE
        rfbH 2168636 .. 2168652 -  -6.7  -4.43576   ACCAGATAGAATAAA              TTGAATT AGA AATTCAA              ACCAAAGAACTCTTC  74 14
        rfbJ 2167701 .. 2167721 -  -3.3  -4.28548   ATTTATTTATTAAAA            GATCATGAA AAT CTCATAACC            GTTTCAGTAGTTCTT  60 18
        rfbX NONE
        rfbV 2165295 .. 2165314 -  -2.2  -3.97636   AGCTGAATCCAGAAA            GGTTAAAT CTAC ATTTAATC             TCAATATAATAACTT  53 45
        rfbU NONE
        rfbN NONE
        rfbM NONE
        rfbK NONE
        rfbP 2158509 .. 2158532 -  -9.6  -2.72511   GTCAGGTGTGGAAAC          CCTGCCACAA ACGG TCATGGCAGG           TTAAAGGTGAATAGT  69 139
         gnd 2157038 .. 2157056 - -11.7  -6.06529   TAGAGATAAAAAAAA             GCCCGGT ATTAA ACCGGGC             TTAAACATTTTTGCA 100 45
         udg 2155645 .. 2155664 -   -10  -3.10244   TTGGTCAATAAATCA            TCGGGACT CATC AGCCCCGA             TTGCCTTATTAATCA  73 34
        wzzB 2154478 .. 2154492 - -12.8  -5.48303   ATAAGCGTAAAAAAA               CCGGGC AAT GCCCGG               TTTTTTAATGAGAAA 100 80
        yeeZ NONE
        yeeY 2145057 .. 2145084 -  -9.2  -5.63103   TTTGAAGCAAAAAAA        TAACCGACGCGT ATTA AAACGTCGGTTA         GTGTCATTTTTTGCA 100 127
        yeeF 2143496 .. 2143514 -   -16  -5.73978   ATGACAAACAAAAAA             CCGGAGGC ACT GCCTCCGG             TTTTACTATTGCCGA 100 53
        phsA NONE
        phsB NONE
        phsC 2134979 .. 2135014 -   -12  -2.99251   CAAACATGGATAAAT    TGCAAGAAAATGTGAC ACAA GGCACATTTTCTTGCT     GACATTATTTTATGG  81 47
        dacD NONE
        sbmC NONE
        yeeA 2131824 .. 2131837 -  -2.3  -3.53012   CGCCGTCTGGGGAAA               CCTGA AGGT TCGGG                GATAAAATCGTTGCC  47 131
        yeeX 2131321 .. 2131355 - -10.7  -3.53091   ACTGGCGGGGTCAAA     CTGCAGTGAGAGCCT GATAT ACGCTCCCACTGCCG     TAGCGCATTATTCGG  81 33
        pduF 2113135 .. 2113154 - -12.2  -4.47259   ATGACAATATCAAAA            GTCTCCCA TTGC TGGGAGAC             GTTTTGATCAGTTCG 100 113
        pocR 2111715 .. 2111728 -  -8.1  -2.82516   GTCGTCAGCATCACA               GCAGC GGGG GCTGC                GGGGGATTTTCACCC  60 411
        cbiA 2110145 .. 2110155 -  -2.4  -3.23715   AGAATCGTCATAATA                 CGCG CCT CGCC                 GCCGCCAGCCAGTGC  44 7
        cbiB NONE
        cbiC NONE
        cbiD NONE
        cbiE NONE
        cbiT NONE
        cbiF NONE
        cbiG NONE
        cbiH NONE
        cbiJ NONE
        cbiK NONE
        cobI NONE
        cbiM NONE
        cbiN NONE
        cbiQ NONE
        cbiO NONE
        cobQ NONE
        cobU NONE
        cobS 2096111 .. 2096128 -  -4.8  -2.76696   CTCGTCCGTAATAAT             CGGCTC ATAACA GAGCCA              GCAGAAAGATCAATT  49 12
        cobT NONE
        erfK 2094016 .. 2094029 -  -2.3  -3.73414   GACAGGATATTTAAA               GGCCA GGCC TGCCC                GCGCTAATGTTGACC  51 7
 STM474_2098 2091785 .. 2091812 -   -12  -5.05782   ATGGATGTCAAAAAA        CCCGGTAAACCT TCTC AGGTCAACCGGG         TAAAGATAATTTATT 100 305
 STM474_2094 NONE
         amn 2088910 .. 2088945 - -12.6  -2.87146   CCGCGGCACAATAAG    GCCTTAACGGGATACA GAAC CGCCTCCCGCTAAGGC     TTCATTCAGCCACTT  82 102
 STM474_2085 2082282 .. 2082293 -  -7.2  -4.58585   CACCGAAAGAAGAAA                CGCC GCCC GGCG                 CGCCGGAGAAATACG  83 476
 STM474_2071 NONE
 STM474_2070 2070020 .. 2070031 -  -2.2  -2.67401   GAAAGGCAATAAGAG                GCAT GTTG ACGC                 GGTAATTACGCCCAA  39 179
 STM474_2069 2068738 .. 2068751 -  -5.9  -3.53012   CTGCTCTTCCGCAAA               CACCG TTCA CGGCG                CGCCAGAAAGGCGCT  57 423
 STM474_2068 2067556 .. 2067585 -  -6.5  -2.74322   TGTAATTGTCCAAAT       CCCTG-ATCCGC TTATCTG GCGGATACAGGA       TGATTTCTACCGCTG  53 212
 STM474_2066 NONE
 STM474_2065 2065202 .. 2065220 -    -6  -2.87132   CTGGCGGGCCATAGA             CAAAAGCG CTT CGCCTTTA             TATCCGATCTTTCTC  55 317
 STM474_2064 2064770 .. 2064785 -  -8.2  -4.84529   CCAGAAACGCAAAAA              CCCCGC AAAG GCGAGG               TTTCGTAATTTTAAT  86 118
 STM474_2061 NONE
 STM474_2060 NONE
 STM474_2059 2062459 .. 2062477 -  -6.6  -4.96848   CTGCGGATATAAAAA             CGCCCCGC ATT ACGAGGCA             TTTTCATGAAAGTCA  82 67
 STM474_2058 2061446 .. 2061462 -  -3.7  -3.14344   CACGGCTCTCATCAA              TTCACTA TCA TAGTGAC              TGACCTTCTCTACAA  48 450
 STM474_2057 NONE
 STM474_2056 NONE
 STM474_2055 2058610 .. 2058622 -  -2.6  -2.79327   TTACCTTAGTTAAAG                CGAG CGGAT CCCG                TAGGACTCAATGTGG  41 7
 STM474_2054 NONE
 STM474_2053 NONE
 STM474_2052 NONE
 STM474_2051 2055293 .. 2055312 - -12.8  -3.21924   TCACCTGTCAGAACA            GGGGCGCC GTTC AGCGCCCC             ACCAGTGATTACGCC  86 34
 STM474_2050 NONE
 STM474_2049 NONE
 STM474_2048 NONE
 STM474_2047 NONE
 STM474_2046 2053180 .. 2053194 -  -3.5  -2.62184   GTGCGCCGGACATCA              CCAGCG GCCT CGC-GG               CGCAGCCAGTAGTTA  42 133
 STM474_2045 NONE
 STM474_2044 NONE
 STM474_2043 NONE
 STM474_2042 2048941 .. 2048954 -  -8.1  -4.78237   TACCCCATAAGAAAA               CCTGC CGGA GCAGG                TTTATCGTGATGTAC  86 27
 STM474_2041 NONE
 STM474_2040 2046514 .. 2046529 -  -3.2   -3.0263   ATCATGTTCTGAAGA              GGATGG TTAG CCATCA               GAAATCTGCCTCCTC  45 23
 STM474_2039 NONE
 STM474_2038 2045426 .. 2045444 -  -5.3  -3.56959   AGATAATCGATATAA             CCATACA GCGTA TGTACGG             CAGCAGCCTGTACCC  57 157
 STM474_2035 NONE
 STM474_2034 2042228 .. 2042247 -    -5  -3.20302   TCATCAGAAAATAAT            GACTGACA CTCA TACCAGTC             CTGTCCATCGTCCGA  52 142
 STM474_2033 2041769 .. 2041787 - -11.7  -5.32396   ACAGGAAAAAGAAAA             GGCGGGT AATAA ACCCGCC             TGAATATTTAGCGTG 100 33
 STM474_2031 NONE
        umuD NONE
        umuC 2037406 .. 2037421 -  -3.2  -4.25104   CTTGTGCGACCAAAA              CCGGTT AGAG AACGGG               GATGATTTGGCAACC  60 64
        cspB 2036570 .. 2036584 -  -7.1  -5.24129   TCCGGGCATAAAAAA               GCTCC TGTAC GGAGC               TAATATGAATTATTT  91 234
 STM474_2025 NONE
        yedj NONE
         dcm NONE
         vsr NONE
        yedi 2029451 .. 2029465 -  -4.2  -3.23733   TTCATTGTAGAAAAT               CAGTGC GAA ACACCG               CGAATTTTCGCCACA  48 10
 STM474_2019 2029163 .. 2029182 - -12.8  -4.34402   TTCTCCACAGCAAAA            CGCCCGGC ATTA ACCGGGCG             TTTTGTCATCGGGCT 100 31
 STM474_2018 2026949 .. 2026961 -  -4.7  -3.14211   ACCCGTCTGCATGAA                GCGTC GGT GTCGC                TGATCTGGCGCGATA  47 375
        dsrB 2025553 .. 2025564 -  -4.4  -4.28115   ACGCATAATAAACAA                GTGA TCTA TCAC                 GTAGTACGGCTGACA  66 118
 STM474_2000 NONE
        fliE 2013105 .. 2013123 -  -5.4  -3.91792   AGAAGCCAAAAAAAT             GATAAAAA TTA TTTTCATC             TCCATTATTGGAGTC  63 478
        yedd 2010657 .. 2010667 -  -2.4  -3.30554   GTAACTAATGATCAA                 GGCG AAG CGAC                 GTTCTTCTGCAACGC  43 117
        fliC 2005172 .. 2005187 - -10.4  -5.26875   TCCGGAATTAAAAAA              GGCAGC TTTC GCTGCC               TTGATTGTGTACCAC 100 64
        fliB 2003911 .. 2003934 - -10.2  -4.42974   TCCATAGACAATAAA          CGGGATGCGC AAAA GCCCACCCCG           AACAAAACTATGTCA  87 33
      tnpA_2 2003202 .. 2003222 - -12.5   -3.8147   CAGATAGAATAAATA            TCCTCCGGC ATA GCCGGAGGT            TTTTCAGATGCGCCT 100 106
        fliA NONE
        fliZ NONE
        fliY 2000671 .. 2000688 -  -5.5  -5.67283   AACGGAAATAAAAAA             GGCGC-CG ATT CACGCGCC             TCCGTTTGCTGACAT 100 95
        yedO NONE
        yecS NONE
        yecC 1997979 .. 1997990 -    -3  -3.39327   CTTTGATATTGATAA                TCAT TATT ATGA                 ATGACTTAAATTAAC  46 215
        sdiA 1997167 .. 1997193 - -12.2   -5.1861   GCCAGTAGTAAAAAA         CCGGCTGTTAGC ATC GCTTTCAGCCGG         TTTCGCGTCTGGCGC 100 58
        uvrY NONE
        uvrC NONE
        pgsA 1992872 .. 1992885 -  -8.1  -5.66684   GAAGGCACAAAAAAA               CCACC CGTA GGTGG                TTTCACGACACTGCT 100 521
 STM474_1973 1992312 .. 1992335 -  -3.8  -3.91084   CTACCTTTAATTAAA          CTGTGCAGAA AACA CCCTGAACAG           TTATATACTCGTTTA  57 38
 STM474_1972 1990515 .. 1990534 -  -3.5  -3.95324   TACCGCCAACAATAA            CTCTCAC TTCAAT GTGTGAG             GCACATAATCACATC  55 187
 STM474_1971 1990117 .. 1990136 -  -6.4  -4.52589   TCGCCCCACACAAAA            GCGAGAGA TGGG TTTCTCGC             TATATTATACTCATG  76 46
        yeca 1989191 .. 1989227 - -18.1  -3.66874   TTAACGCCAGGCAAA    GATTACCGGGCCCGGAC GCC GTCCAGGCTCGATAATC    ATCACGCTATGGCCG 100 52
        yecH 1987268 .. 1987290 -  -2.8  -3.59867   CAAAAAATTAATGAA          CTGGCTCAT GCCGCA ATGA-CCAG           CCAGGATTATCCGAC  49 237
 STM474_1965 1985096 .. 1985115 -  -9.2  -3.23692   GAGGATTATCAGCAA            CGCGCCAG CACG CTGTCGCG             TCTGGCAGATGAAGC  65 400
 STM474_1963 1983697 .. 1983715 -  -2.4  -3.61398   GCCCTGGGTGAATAA             CGATTACC AGG GATAATAG             ATATGTTCAGCCTGT  49 10
        otsB NONE
        otsA 1980487 .. 1980504 -    -4  -3.55761   CAGCTACTGGCTAAA             GCGGTC TCTATC GCCCGC              CCTGTTCAGGCGAAA  51 388
        flhD NONE
        flhC 1978653 .. 1978676 - -15.4  -5.86332   GCAAGGCAAAAAAAA          GCAGCGGTAA TGAC TTACCGCTGC           TGGAGTGTTTGTCCA 100 52
        motA NONE
        motB NONE
        cheA 1974748 .. 1974763 -  -3.2  -2.75064   CTTCTCACTCAATCA              GGCG GCTGTGAT CGCC               ATACGTTGTTCGCGG  43 7
        cheW 1974178 .. 1974225 -  -8.4  -3.50853   CTGGCGGAAGCATAA CG-GTGAATATTGCCGGATGGCG CGA CGCCATCCGGCAACGTTATTACG CGACGTGTGATGCTG  71 21
        cheM 1972201 .. 1972223 -  -6.9  -2.76483   CATTCAAAGTACAAC          GGGCGC-GCC CTGC GGCAGCGCCA           TGCTTCCCGTATTAC  55 125
        cheR NONE
        cheB NONE
        cheY NONE
        cheZ 1969111 .. 1969142 - -13.1  -3.10493   GCGTTAATAGAGATA      GCCGGATACGATA AGAAAG TCTCGTATCCGGC       CGGGTTGACGGATTC  86 78
        flhB NONE
        flhA NONE
        flhE 1965354 .. 1965372 -  -4.5  -3.56042   TTATTCAAAAAGAGA             GTCAGGT CTGCT ACCTGGC             AAAGAAAGGGGCGGT  54 40
 STM474_1944 1963855 .. 1963880 - -10.3  -4.09685   CTTGATTCTGGAAAA         CGGCGGAAGCG ACGG CGTTACCGCCG          CACCCATCATGCGAA  86 156
        yecM NONE
        cutC 1958520 .. 1958544 -   -10  -5.71983   TGAAGGAGAAAAAAA          GGCCCCTG TTGAATTGG CAGGGGCC          TGGTACGAGCAAGCA 100 73
        aspS NONE
        nudB 1952113 .. 1952133 -  -3.2  -5.40474   ATTTCCTCAAAAAAA           GCG-CGCCT TTTC AGGCGACGT            TAATGACAAACTCTT  81 15
        yebC NONE
        ruvC 1950765 .. 1950787 -  -7.7  -3.75153   CCTGTGGAATTGAAA           CCCCTCAAC GCGAG GCTGAGGGA           GAATGATTTAGCGCA  71 33
 STM474_1928 1948306 .. 1948321 -  -7.6  -4.47611   TATCATAAAAAAAGA              CTGGAT GTTT ATCCAG               ATGAAAAACACGTTA  80 131
        ruvA NONE
        ruvB 1946588 .. 1946606 -  -3.8  -3.21934   CCGGGCCTACAAAAT             CGCCCA GGTCTGA TGAGCG             CAGCGACTTCAGGCG  48 41
        znuA NONE
        yeba 1942609 .. 1942631 - -13.4   -5.8901   ACACAAAACAAAAAA           GCCGGCACAC ATC GCGTACCGGC           TCTGTCAGCGCATTT 100 42
        msbb 1941537 .. 1941554 - -11.3  -3.96148   GTTTGTCAGCATAAA             GCCTCTC TTAC GAGAGGC              TTTATTTATTTGATG  91 31
         zwf 1937130 .. 1937155 -  -5.4  -5.80364   AGTGTAATAAAAAAA         GCCTCGCA-GG TGAAT CCACACGAGGC         TTAAAAGTGCAAAAA 100 105
         edd NONE
         eda 1934406 .. 1934438 - -11.4  -3.08046   GCGTGACGGTAAAAG     GCTAATG-CGCCATC GCCT GATGGCGACGTTAGC      GCATTTTTATCAGAC  79 97
        yebG 1932789 .. 1932799 -  -4.6  -4.41206   AAGCATGGTACAAAA                 CGCC GGG AGCG                 CAAGTGTGGGTTCAG  66 37
        yebF 1932375 .. 1932387 -  -5.5  -4.17048   GTTCCGGCAAAAGAA                GCGCA AAT TACGC                TGCTAGCGGGGCTTA  67 28
        yebE 1931597 .. 1931611 -  -5.6  -3.39908   GGGTGGCAAAAGACA               CGCATG ATG CAAGCG               AAACATGTTACTTAA  56 51
        ptrB 1929339 .. 1929365 -  -8.7  -3.89291   GGAACACCACAATAA        CCCGCGAC-GCT CACA AGCCGTTGCGGG         CGCGCGTCTATGCGC  76 33
        yobA NONE
 STM474_1906 NONE
        yeby 1925818 .. 1925845 -  -8.5  -5.76633   TCAGAGATAAAAAAA        CCGTAAGCCTT TTCGTG AAGGTTTACGG         TTTTTTATTAAAAAT 100 44
 STM474_1904 1925626 .. 1925655 -  -7.3  -5.33026   TAATCTAAATAAAAA       GAGACCGAATAC GATTCCT GTATTCGGTC-C       AGGGAAATGGCTCTT  95 57
 STM474_1901 NONE
 STM474_1900 1922720 .. 1922731 -  -4.4  -3.85817   ATGTGGTCGCAGAAA                TTCC TGAT GGAA                 GATGAGTGCCTTGAT  58 369
 STM474_1896 NONE
       mig-3 1920994 .. 1921028 - -10.9  -2.95476   ATCAGTTATGACAGA     CAGGCCTTCTTCATA TTTGC TATAAATAAGGCCTG     AGCTTTCCTGACAAA  75 41
 STM474_1893 1919990 .. 1920000 -  -5.4  -3.05343   TTGACATTTGCAATA                 CATG ACA CATG                 ATTAGCTTCAGCCGC  52 77
        pagM 1919540 .. 1919574 - -11.7  -3.67976   TTCATCAAGGTTAAA    GGAACAAAGAGCT-CT TTAA AGTAACTCTTTGTTCC     ATTACGATAGTTTAA  89 108
 STM474_1884 1913324 .. 1913335 -  -4.4  -3.39908   TTTCCCCAAAAGACA                TGAG CAAC CTCA                 AGCGCCTTGTCTGGA  52 414
 STM474_1882 1912538 .. 1912550 -  -6.3  -2.79915   AGCTACCTGATTACA                GCTTT CAT AAAGC                TATGGGTATTCAAAT  53 50
       sopE2 1909476 .. 1909507 -  -6.6  -4.75288   TTATATTAAAATAAA      GATGACGACGTTTT GTTA AAAGCGTCGCCATA       AAAACGAATATATAG  80 98
 STM474_1878 NONE
 STM474_1877 NONE
        pphA 1907948 .. 1907963 -    -6  -4.44608   CTGACTCAAAAAGAA              CCCGTC GCCA GGCGGG               TTATTTATTCTTCCT  76 319
        yebR 1901507 .. 1901526 - -12.2  -3.15996   CAGCAGGCATGAACA            GGCGTCAT TATA ATGACGCC             ATCAGTAATTGCTAC  83 53
        proQ NONE
         prc 1898673 .. 1898694 - -13.1  -6.06723   CTTGTTAAAAAAAAA           CAGGCACAA TTTT TTGTGCCTG            TTTAGCGTTACTTAT 100 33
        htpX 1897585 .. 1897602 - -12.7  -5.42259   TCAGGCGTAAAAAAA             GCGCGTC ATTC GACGCGC              TTTTCATACTTGCCA 100 50
        kdgR 1895186 .. 1895208 -  -9.9    -5.626   GATGTTATAAAAAAA           GCAGCTACA TTTTT CGTAGCTGC           TTTTTTTTAACGTCA 100 56
        yobG NONE
        yebo 1893829 .. 1893842 -  -3.9  -4.88288   CAAAATAATAGAAAA               GAAAA GCGA TTTTC                GGCACCGCTTTTTGT  71 312
        yobF NONE
        cspC 1893048 .. 1893066 - -12.4  -4.89009   ATATTGAATTAAAAA             GCCCCGCT TTT AGCGAGGC             TTTATATCTGAGGCT 100 74
 STM474_1858 1891110 .. 1891137 -    -7  -3.53224   GACTGGGGCGCTAAA        GGGCGCAAGT GTAACGCG AATTGCGCCC         CGGGAAAATCCTTTA  62 38
        rrmA 1890242 .. 1890265 - -10.4   -2.5655   CGTACTGATAGGAAT          TGGCGTCCAGA TCC TCTGGACGC-A          TTTTCACGGTTAACG  70 35
 STM474_1851 NONE
 STM474_1850 1883967 .. 1884019 - -12.5  -3.09635   ATGCCCATTAGCGAA TTTCCACAGTGGCTGGCGGGCAGCG CGC CGCCGCCCGCCCGGCATAACGGACA GATTATGTCCGCGAT  81 75
 STM474_1845 1878280 .. 1878290 -  -2.4  -4.56597   GCGGTGCTGGAAAAA                 CAGG GCT CCAG                 TAAGTCACGTATTCT  65 209
        yoaA NONE
        yeaz NONE
         slp 1874631 .. 1874655 - -14.4  -2.56596   GTCTCTATGAATGCA          GAAACAGCGG ACCAG CCGCTGTTTC          TTTTATTGATAAAAC  87 47
        fadD 1872747 .. 1872763 - -11.5  -5.76633   CCATAGACAAAAAAA              CGCCGGC TTA ACCGGCG              TCTCTCGTTAGCTGA 100 49
      tnpA_2 1872037 .. 1872057 - -12.5  -3.93868   GCGCCAAAATAAATA            TCCTCCGGC ATA GCCGGAGGT            TTTTCAGATGCGCCT 100 106
         rnd 1870787 .. 1870802 -    -9  -5.14563   TCCTGGATTAAAAAA              GGCAGA AGAA TCTGCC               TTTTTTATTTTTTTA  93 98
        ycgL 1868501 .. 1868511 -  -8.2  -2.55544   TCATGATGGAATTCA                 GGCG CGG CGCC                 GAATACCGTTTAACG  59 35
 STM474_1833 NONE
        ycgN 1867253 .. 1867268 -  -2.5  -3.98291   AAGAATTGTAAACAA              TCAGC CGTTTT GCCGA               AGACTTATTCTGCCC  54 30
 STM474_1831 1866735 .. 1866751 - -10.1  -5.17054   AGAAGATGTAAAAAA              CCGCCTG GCA CAGACGG              TGCATCAGGCGGTTG  93 58
 STM474_1830 1865904 .. 1865919 - -10.4  -2.98823   GGTCGTTGATACACA              CGCTCC TTCG GGAGCG               TTTTTTTTGCCCGAA  73 525
        fadR 1862447 .. 1862458 -  -4.4  -4.27617   GAGATTCGATCAAAA                CTGT CGTC ACAG                 TATAACCTGAGCAAT  66 309
        dadA NONE
        dadX 1858396 .. 1858416 -  -3.9  -3.90241   GACGAAGCAGAATAA            GGTCGCC TGGCAAC GTCGACC            CGCCCCCAAGTGGAC  57 67
        emtA 1854731 .. 1854788 - -10.7  -3.14257   GGAAAAATGAAACGA TCACCACTCC-CCGCCTGAGCTTTCGTT TCCTT AACGTTAGCCC-GGCGGTGGAGCGG-GA GTTGCAGCGGATTAT  69 106
        ymgE 1853651 .. 1853678 - -14.2  -2.62184   CGCGTGTTTATAGTA        GGTTGACCCGGT GCTG ACCGGGTCAACG         CTTACACGTTCTGCA  87 45
 STM474_1816 1851733 .. 1851750 -    -7  -4.08945   ATCATTGCGCTAAAA             TCCACG TCCCGG CGTGGA              TTTTTTGTCTGTATA  70 2
 STM474_1805 NONE
 STM474_1804 1839318 .. 1839328 -  -2.4  -4.17048   CGGTTTTGAAAATAA                 CCCG TAT CTGG                 ACCAGGTTCGCGAAA  56 449
        ychh 1837380 .. 1837406 - -10.1  -2.65388   CAGTTAATGGACAAT        GCCCGGT-GGCG ATAA CGCTTACCGGGC         CTGAACCGGTTAGCT  70 35
 STM474_1798 1834192 .. 1834203 -  -7.2  -3.21276   CTGGCTGTTAGAATA                CGCG CCGT CGCG                 CCTGACTGGGACAGG  59 167
 STM474_1795 1832644 .. 1832656 -  -2.6  -2.59379   CAATAAAAGAGAGAG                CCCC CTTTT GGAG                TAATTGGCAGCGCTC  40 100
        hemA 1831276 .. 1831288 -  -2.7  -3.59262   CTTCATAGGCGTAAA                TTCAC CCT GTAAA                AAAGTGTGGTGTGTG  50 44
        prfA NONE
        hemK 1829365 .. 1829375 -  -2.4  -3.05597   GTCATGGCGTAAAAC                 GTCC GCA GGTC                 ACGCGTTCATTACCA  42 1
        sirC NONE
        ychA NONE
        kdsA 1827216 .. 1827237 - -10.2  -5.36441   GCCTGATATAAAAAA           GCCGGATA GTATCT TATCCGGC            CTACACAAGCTAAAA 100 48
        chaB 1825153 .. 1825167 -  -2.8  -4.37886   CCATTGCCGACAAAA               TTTCTC AAG GAGAAG               GGTTATCCATGCAAA  60 467
        ycho 1823389 .. 1823403 -  -5.7  -3.19192   CGCGATGTAACGCAA               CTCAC CCCGC GTGAG               CGCGATATTCTGAAG  54 197
        narK 1819362 .. 1819380 -  -8.8  -6.06529   TACAGATAAAAAAAA             GCGCGG TCTAACG CCGCGC             AAAGGATAATCAAAA 100 42
        narG NONE
        narH NONE
        narJ NONE
        narI 1812314 .. 1812329 - -10.4  -5.65177   ACAGCCATAAAAAAA              CTCCGC CGAA GCGGAG               TTTAGGGCATCGAGA 100 46
 STM474_1776 1810427 .. 1810443 - -12.3  -2.95102   AGCGCAGCGAGAAAG              CGTTGCC GCA GGCAACG              ACCCGAAGGGCGAAG  82 161
        rssa 1806836 .. 1806853 -  -2.6  -3.23853   TGGCTTTAATCAATA             GTGGCA TGGTAT TGCCGC              TTGCGCCTGTCAGAA  45 68
         hnr 1805724 .. 1805734 -  -5.4   -4.0056   ACAAATACTTATAAA                 TCTG CCG CAGA                 TAGTAACACTCGTCG  63 83
        galU 1804635 .. 1804653 -  -9.5  -5.64274   CCAGGCATAAAAAAA             GCGCCGG ATTTA CCAGCGC             TTCTGTTAAAAAATT 100 53
         tdk 1802688 .. 1802705 - -12.7  -3.85864   TTAGCATGACAATAA             CGGCCTC AATT GAGGCCG              TTTTTTTGTTTTACC 100 176
        yche 1798814 .. 1798835 - -13.7  -3.36492   GTGGGAATGTCACAA           GGCGGC-CCC TTA GGGCGCCGCC           TGTAAATCAGCAGGT 100 47
        oppa 1796427 .. 1796452 - -16.3  -2.80583   GATGAAAAAAGACAC         CATGGGACAAC CGCA GTTGTCCCATG          TCTTGCCATTAATGT 100 34
        oppB 1795430 .. 1795444 -  -2.8  -3.20616   AGTATCAATAGCGAA               TTTTCG GGT CGATAA               CGGCATAGAGCACAT  45 0
        oppC NONE
        oppD NONE
        oppF 1792449 .. 1792469 - -12.6  -4.21812   CCTCACCTAAAAGAA            GGGCTGAC GAATT GTCAGCCC            TTGCGATTATAACGG 100 32
 STM474_1759 1791235 .. 1791252 -  -3.4   -3.6579   AATGGATCTGAACAA             TCGCCT GACTGA AGACGA              AACGCTTGAGCAGGC  51 365
        yciy 1789180 .. 1789200 -    -9  -3.21595   AAGGGCGATTATTAA           CTGCCGGGC CGAT GCCC-GCAG            TGGACAGTAACGATC  65 230
        tonB 1787798 .. 1787826 - -10.3  -2.54504   ACTGGCCAAAGAGAT        CGCGCACGGTC GGGTTGT AACCGTACGCG        TGGAAGGAATGACAT  65 312
        ompW 1784436 .. 1784448 -  -9.1  -2.56271   CGTGTACTACAACAT                GTCGC AAG GCGAC                GATCCGCGAGGTAGC  59 323
        trph NONE
        ycio 1773583 .. 1773598 - -11.8  -2.69188   AACAGGAGAATGAAC              GGCGCG TTGC CGCGCC               ATTTTAAGGCCGCGT  79 60
        yciL 1772587 .. 1772616 - -10.8  -3.14931   CGTAGGCCGGATTAA       GGCGTTTGCGCCG CCATC CGGCACAAAC-CC       TCTTGTCTGATGATC  78 66
        sohB 1769901 .. 1769929 - -16.1  -2.56596   TGGTTGATTAATCCA        TGCCGGATGGC GCTGAAT GCCATCCGGCA        ATAGCGGTTTACATC 100 34
        topA 1766599 .. 1766616 - -14.1  -5.37043   AGGGGATATAAAAAA             GGGCCGC TTAC GCGGCCC              GCTTGACTATAGTGA 100 54
        cysB 1765105 .. 1765116 -    -3  -4.20516   TTGCCAGTGAATAAA                TCAA TCTT TTGA                 CTCAAGATAACTATT  58 169
        ymia NONE
 STM474_1728 1764430 .. 1764455 -  -9.1  -4.88228   AGCGAAGATGAAAAA         GCCCGATAA ATAACGCA TTATCGGGC          TTTGACGAGATTAGA  90 238
        acnA 1761569 .. 1761599 -  -9.6  -2.84051   CCACCGGTATTAAAG       CGCGGGCCTGCC TGTTTAC GGCAGGCCCGAT       AAACGGCTTTAGTTC  70 34
        pgpB 1759919 .. 1759950 -  -5.2  -3.54543   ATCCAGCCTTCTAAA      TTACCATTTTCCCGC CTC GCGCGAAA-TGGAAA      TGCGCCCACCATCAG  56 77
        yciS NONE
 STM474_1723 1758259 .. 1758286 -  -2.8  -3.64703   TGCGGCGCAGGGAAA        TTAACAGGTT CGATTGAC AACCTGATAA         GCCCTGGTCGCCGAT  50 107
        pyrF NONE
        yciH 1756649 .. 1756659 -  -5.4  -3.50555   GCGAAATAACAGGAA                 GTGA CTA TCAC                 CTGCGTGATATACCC  57 480
 STM474_1711 1746609 .. 1746632 -  -2.4  -5.20534   ATCAATCAATAAAAA          CGATCAATAT ATAA AAAATGATCG           AAAAAAACAATATAT  74 403
 STM474_1710 1745482 .. 1745508 -  -7.8  -3.85698   GCGCCGGGGCAGAAA         CAGCGTCTGGGC CTG GCCCGCGCGCTG         ATTTTACGCCCTAAA  68 353
        pspA 1738562 .. 1738587 -  -3.1  -3.70902   CTCCTTACACCTAAA         GCTGATGAGCG ACGG CGCGTATCGGC          GCCGCCATTGTCATT  51 39
        pspB NONE
        pspC NONE
        pspD NONE
        pspe 1737279 .. 1737295 - -10.8  -3.80018   CGGAGAGATCAACAA              CGGCGC ATTAA GCGCCG              CGGTTAGTATGAGTA  85 57
        ycjX NONE
 STM474_1697 1734680 .. 1734712 -   -12  -2.60508   CATGGCGGAAAAACG     GGCGCTG-CGGCGTA AAGC CAGGCCGTCAGCGCC      ATGTGAAAGGTCATT  79 36
 STM474_1696 1733003 .. 1733026 - -12.5  -3.28712   GCTCTTTTGTCACAA          GAAGGCCTC TATCCG GAGGCCTTC           TTGTTTTCTACTCTT  90 33
        aeep 1731066 .. 1731110 -  -2.8  -3.69354   GCTCAGAACCGGAAA CCCAGGCGCTTTGCCAGTTAA TTCA TCGACTC-CAACCCGCCTGGG TCGTCTCTTTTCACG  51 272
        mppA 1728758 .. 1728776 -  -2.3  -3.55889   ACACAGCAATGAGAA            CG-GCGGC ATCA GGCGCTCG             CTTAATCCCCATGCC  47 100
 STM474_1690 1726534 .. 1726556 -  -2.6  -3.60805   ATATTCCACGCTAAA           GCACCCTTTC GTC GTAAAGACGC           CATGATAAGAGCAAA  50 270
 STM474_1689 1725585 .. 1725615 - -14.1  -2.75074   GCCAGGCGAATATCA       CACGGTTGCCG TCTACGCTC CGGCAACCGTG       TTAGAAGCTGTTCAT  87 68
 STM474_1687 1724102 .. 1724114 -  -5.5  -3.06915   ATGTACTTTACCGAA                TACCG CAA CGGCA                AGATGGATGATTAGG  52 97
 STM474_1686 1723774 .. 1723792 -  -5.2  -3.87994   ATTCAGGCCCAGAAA             CAGTCCGG TAC CCATACTG             GACACGGCCTCCCAA  61 54
 STM474_1683 1720107 .. 1720119 -  -5.5  -3.29511   TTTATTTGGCGATAA                CCATC AGC GACGG                ATAGCGCGTTTATTC  56 16
 STM474_1682 NONE
 STM474_1681 1717173 .. 1717187 -  -2.2  -4.52873   TGGTGATAAAAAGAA               TTATAT TAG ACATAA               TAATTAATATAGTTT  61 40
 STM474_1680 1716462 .. 1716473 -  -4.4  -3.91597   AGTATATATATTAAA                TGTG AGGG CACA                 CAAGAGAATGCCTGC  59 98
 STM474_1677 1714659 .. 1714700 - -13.1  -5.18371   TGCGACAAAATAAAA GATAGC-CGGTGCCCGATAA GTG TTATCGGGCACCGAGGCTTC CCTGTCCGGATGGCG 100 67
        ynaj 1712990 .. 1713000 -  -6.8  -3.04248   GAACACGGCCGAACA                 GGTC ATT GACC                 ATCTGCGCTGCGACC  54 157
        ydal 1709644 .. 1709657 -  -2.3  -4.44245   ATATCAGGCATAAAA               TCGGG TTCG CGCGA                GCTTGCGCTGGCGGT  59 63
 STM474_1670 1708094 .. 1708112 -  -7.4  -5.03145   GAACGTGCGAAAAAA             GCGCCT TAGCAAC AGGCGC             TTACCAAACATGTAT  86 43
        zntB 1706792 .. 1706811 -  -9.3  -5.83822   TACAGGCAAAAAAAA            GCCGACT AATCTA AGTCGGC             GTCGTACGAATCAAT 100 215
        dbpA 1705099 .. 1705136 - -13.5  -3.00106   TCGAAGTGAAATAAT   CTGCA-GGCGTCTCAGCA CTC CGCTGAGACGCCATGCTA   TCGATCATTTTAATA  87 30
 STM474_1665 1703423 .. 1703452 -  -9.3  -2.62613   TGGTACGCTAAATAC       CCGAGCCCGCA TAAGAGAG TGCGGGCTCAA        ATCAATCATCATCGC  66 41
        ydbJ 1698112 .. 1698125 -  -3.7  -4.24002   GCGTAAACGGTAAAA               CGGTC ACCG GCCCG                GAGCTCAGCTTTGGC  64 336
        ydbh NONE
        ynbE NONE
        ydbL 1693414 .. 1693426 -  -6.3  -3.75153   TTCGCCTAATGTAAA                TACGA CCT TCGTA                TTCAGAAATTACCCA  64 83
 STM474_1655 1692689 .. 1692716 -  -5.6  -3.60792   CTGGTAACCGGTAAA       CG-CGCGG-TGG TTCTCT CCAGCCGCGGCG        GTATCCATAAAGACA  55 201
        hrpA 1688168 .. 1688179 -  -3.6  -3.53811   CGGATCGCTTTGAAA                GACG TCGT CGCC                 TGGCTTTTTAGGCCG  50 33
        ydcF 1687262 .. 1687278 -  -2.3  -4.06687   AGCTTTTATAAATAA              TTCATCA AAT TTATGAA              ATGGTGGTCGCACTT  55 70
        cybB 1686358 .. 1686395 -  -6.9  -3.14931   GTGACTTTGGAGCAA   CATGGCGCCGTTGCG CTATTTTC CGCCACTACGCCACG    CTCATCGTAAGTACA  59 306
 STM474_1644 1679059 .. 1679074 -  -5.4  -3.84514   AGCTTAAGGATGAAA              GCATCG CTCA CAATGC               CCTGTTAAAAACTAA  61 444
 STM474_1642 1676668 .. 1676682 -  -5.6  -3.07622   ACAGATGCTAGCCAA               TGCCTC AGG GAGGCC               TGTTATAGGTTACTA  52 347
 STM474_1640 NONE
 STM474_1639 1674496 .. 1674520 - -15.7   -4.5538   AGAAAATTCAGAAAA          GCGCCAGCGGA AAA TCCGCTGGCGG          ATGAATCAGTTATCG 100 31
         trg 1672693 .. 1672724 - -16.6  -4.30719   CTGTCGGAGAATAAA      CGCGCCCGC-GGCTA AAA TAGCCCGCTGGCGCG      ACGCTTACTAAAGGA 100 33
 STM474_1636 1670084 .. 1670102 -  -3.8  -2.62184   CTTCCTTTTACAGTA             TCCTCACA GCC TGTGAAGC             TTACCGCTTTTAAAG  44 35
 STM474_1635 1668503 .. 1668515 -  -5.5  -3.79906   TTATGTCGATAAGAA                CCGAC CGA ATCGG                ATGTAAACCTCACGC  61 65
        mdoD 1666684 .. 1666694 -  -3.2  -3.25356   AGGCAAACTGACTAA                 CGCA TGA TACG                 ATCGTCGACATAACG  46 11
        yceI NONE
 STM474_1632 1664668 .. 1664688 - -15.5   -4.4084   AATCATACAGGAAAA            GGTCGGGTA TAG TACCCGACC            TTTATATTACTGGGG 100 32
        rimL 1657512 .. 1657523 -  -4.4  -4.25681   ATCGAAGGCAACAAA                GACA ATAA TGTC                 TGGATCTGTGACTGC  66 397
        tehA NONE
        tehB 1655180 .. 1655191 -  -3.6  -3.95873   GCCCGACAAAAAAAT                GCCG AACG CAGC                 GAGACTTACAGAACT  55 49
 STM474_1619 1653988 .. 1654043 -  -3.9  -3.55444   CCGCCATTTGTCAAA GCCCG-GAC-GCGCACCCCGATCCAACG CGT CGCTGGTTAGCGGC-CGCCGCCGCAGGC GTTTTTTATTTACTT  51 373
        ydcN 1652516 .. 1652527 -    -3  -2.72211   GAAGCGCAAACTAAC                GAAA TAGT TTTC                 CCGCTTAATCACGTG  41 30
        ydcP 1650059 .. 1650073 -    -5   -3.2789   ATAACTTTAAATATA               TACTCC CAG GGAATA               ATGGATTTACTATGG  54 441
        ugtL 1647635 .. 1647645 -  -8.2  -2.86391   AGCAGGTAAAGATTA                 GCGG ACA CCGC                 TTAAACAGATGGTTA  61 479
        pcgL 1646733 .. 1646750 -  -3.5  -4.10161   TATCAGTTGTTAAAA             TTAACAA TGAT TTGCTAA              CTGTTATGGTGCTTT  57 82
        ydcR 1645177 .. 1645207 -  -6.1  -3.53855   TTTCCTAAAAATAGA      CG-GCGCGCCAGAT GCTC ACCCGGCACACTCG       GGAAATTTAGTCAGG  60 65
        ydcW NONE
        ydcX 1643084 .. 1643112 -  -5.2  -4.57073   GACCTGGCGGAAAAA        CCATGCCCGGTA ACCTG TATCGGGCTTGA        GGTCAGAAAAGCGAA  71 28
        ydcY 1635692 .. 1635705 -  -4.5  -3.14051   CCAGCTTGATGAACA               CG-CCG CGC CGGACG               CCTGCTGATGAACCA  50 487
        yncB 1633657 .. 1633677 -  -7.6     -2.55   CAACATCGCAATCGA            GTCCCGAA GAAGT TTCGGAAC            TTAATTGTAAAAAAG  57 297
        yncC 1632908 .. 1632922 - -12.8  -3.04515   AAATATCCGGCAATA               GCGGGG AAT CCCCGC               TATTGATAAGTCATA  83 53
 STM474_1599 1629409 .. 1629430 - -10.1  -2.80821   CGTTTAAAGAGATGA           CTGGAGGGG TTTC CCCCTCCAT            ACCCTATTTACAGAG  71 33
 STM474_1598 1629054 .. 1629064 -  -2.4  -3.01712   GCGTTGCCGCCAACA                 CCGC ATC GCGC                 CCAATGCTTAGTCAG  42 33
 STM474_1596 1626189 .. 1626203 -  -5.7  -4.79949   TTTTGAAAAAAATAA               GACAG GCCGG CTGTC               GCGCCGGAGGTACGT  76 179
        nhoA 1625120 .. 1625150 -    -6  -3.30441   CACCATTCGCGATAA       CCAGCCGGAAAACG TCA CCATCTCCGGCCAG       GCGGTCATTCTGTTT  54 103
        smvA 1613191 .. 1613205 -  -4.2  -2.82742   ACTCGGTCATAAGGA               GTATGC CGT GCAGAC               GTTCACTGGTCGTTG  45 483
        fdnG NONE
        fdnH NONE
        fdnI 1605702 .. 1605727 - -14.1  -4.38171   GACAGCAGATGAAAA         CAAGGCGCTAC CAGG ATAGCGCCTTG          TTTATCAGATTGCGA 100 46
 STM474_1578 1602350 .. 1602367 -  -3.3  -3.93782   GGAGTTAACATGAAA             TCGAACC GTCA GGCTCGT              CATATACTTGGACTG  56 43
        osmC 1600956 .. 1600976 - -13.3  -3.27951   TAGGCCACGACAATA            GCCGCAGAC GTG GTCTACGGC            GCGTTGAGGTGATAG  95 139
        hdeB 1600374 .. 1600391 -  -6.2  -4.53036   TCACAAATAGTAAAA             CCCGAC ACACAG GCCGGG              TTTTGATATCAGTTT  76 45
 STM474_1573 1599402 .. 1599412 -    -4  -2.97158   CATCCGAAGAACAAG                 CATA GAC TATG                 GGGCTAATCTTTACG  46 96
 STM474_1572 NONE
 STM474_1571 NONE
 STM474_1570 1592871 .. 1592887 - -10.8  -5.14965   AGCGCCAGTAAAAAA              CCGGCC ATCAA GGCCGG              TTGGGTCCGGAGCGC 100 51
 STM474_1566 1587037 .. 1587049 -  -2.7  -4.19472   CAATACACTGGAAAA                TCTGA CGG TCAAA                GCAGCAACCGGGGAA  58 234
 STM474_1562 1583698 .. 1583712 -  -4.2   -3.3334   AATGCCAGCTTATAA               GTCATC AAT GTTGAC               CTCAATGACGCGTTC  50 5
 STM474_1561 NONE
 STM474_1560 1582813 .. 1582844 - -12.6  -4.72497   CAGGGATGAATAAAA      TAAAACCGGTA-CAT ATA ATGCTACCGGTTTTA      CCGAGAATAAGCATC 100 39
 STM474_1557 NONE
 STM474_1556 NONE
        pqaA 1576628 .. 1576639 -    -3  -3.17956   AAATCAGTTGATTAA                TTGA AAAT TCAA                 TCGGAGCTATCGTTT  45 22
 STM474_1554 NONE
 STM474_1553 1574131 .. 1574158 - -17.1  -3.71848   TTTGTCGATGAATAA        CACCGCATGGC GGTCAT GCCATGCGGTG         GAGCTTGCCGTAAAT 100 40
 STM474_1550 1571774 .. 1571787 -  -5.3  -2.75963   ACGTTTATCCCAAAC               CACTA TAGT TAGTG                TGGGCATCATATGTT  49 123
 STM474_1549 NONE
 STM474_1548 NONE
 STM474_1547 NONE
 STM474_1546 NONE
        hypC NONE
 STM474_1544 NONE
 STM474_1543 NONE
 STM474_1542 NONE
 STM474_1541 1564321 .. 1564334 -  -6.7  -4.11751   ATCAATCTGCTAAAA               GATGG CAAC CCATC                GAATCCTAATACAGA  70 218
 STM474_1539 1561965 .. 1561991 -    -8  -3.06183   CTGAGCTCGACTTAA         CTGGCGCAGA ATGTTCA TCTGCGCCAT         AACCTGAATAGCAAA  62 43
        yneJ NONE
        ydeA 1555333 .. 1555347 -  -4.2  -3.40403   TTTCCCGCAGCAGAA               GGCG CATGAGT CGCC               GGAAGCGAAAAGCAA  51 433
        marR NONE
        marA NONE
        marB 1553678 .. 1553696 - -12.4  -5.52986   ACGGTACTAAAAAAA             TGCCCCGC AAA ACGGGGCA             AAGAGGTTAAAGGTG 100 32
        ydeE 1550864 .. 1550898 - -16.5  -4.55287   GCCATCCAGACAAAA    GCGGCCCCTTGC-GCA ACGA TGCAGCAAGGGGCCGG     CTCTGCGAGGGATTA 100 394
        ydeJ 1549066 .. 1549084 -  -5.2  -5.03145   GAAGCGGGTAAAAAA             GGTGGCCA AAA TAGCCACA             GTGGTGGACGGAAAT  82 171
        ydfG NONE
        ydfH 1544813 .. 1544823 -  -4.6  -3.41126   TGAGAAAGCGGAGAA                 GGCG TCT CACC                 CCGACGTTAAAGGGG  52 42
        ydfz 1544401 .. 1544423 - -17.8  -3.10513   ATAGCGTAACAGAGA           CCCGGTAGCA TTA TGCTACCGGG           AAGGCCGGAGCGGTT 100 58
 STM474_1518 1542321 .. 1542340 -    -2  -3.85698   TGGTTGTCCGATAAA            TACGGTCG TCGG CTGCCGTA             TATAATATTGAATAT  51 519
        ynfB NONE
        speG 1537526 .. 1537562 -  -7.3  -2.88023   CGATTACTACTAAAC   CG-GGCGCGGT-GCGAC TCTCC GTGACTACCGCGCCGCG   CTTACTGCGCGGTGG  59 27
        ynfD 1536344 .. 1536356 -  -6.3  -3.14132   CCCCTTTGGGAGTAA                GGATT ATT AATCC                ATGTCAAAGAGCGTT  57 70
        ynfe 1533788 .. 1533803 -  -3.2  -4.56597   CCGGGCGCGTAAAAA              CGTCCCG GAG CAGG-CG              GCTTAGATTTTTTCG  64 28
        ynff NONE
        dmsb NONE
 STM474_1506 1529760 .. 1529777 - -12.7  -2.78349   AAACAATCCCGAAAG             GTGCGGG TCGC CCCGCAC              GCATAAATTAACCTG  82 33
        ynfI 1529099 .. 1529116 -  -8.4    -4.614   CGCAATGAGAGAAAA             GGCAGG TAAAAT CCTGCC              TTTTGTGGGGATTAA  89 37
 STM474_1504 NONE
 STM474_1503 NONE
 STM474_1502 NONE
 STM474_1501 1525343 .. 1525371 - -14.6  -3.04443   CGTACAATAATGATA        CTGCCGGATAGC GAGAG GCTATCCGGCGG        CAACGTTAGCTGTTT  89 31
 STM474_1500 1523545 .. 1523556 -  -2.2   -4.4846   TAAGCGAAGAAGAAA                GCAGC GTC GC-GC                ATAGCTGTCCTATAA  62 421
 STM474_1495 1519513 .. 1519545 - -11.3  -2.90496   CGTGGCGTGAAACCA      GCCCGGCGATAGC GCACGTT GCTATCGCCGGAT      TATTTCTTTTCAGGC  78 35
 STM474_1494 1518879 .. 1518897 -  -8.1  -4.57569   TTAGCGCCGTAAAAA            CGGGCGCG GGGG CGCGCC-G             CAGCATGTTACGACT  82 40
 STM474_1493 NONE
 STM474_1492 1517788 .. 1517813 - -10.4  -2.62263   ATTTGCCTGAGACGA         TCGCTGCCGG TTGGTT CAGGCAGCGA          TTCCCGCATTAATCC  70 34
        ydgG 1515564 .. 1515595 -  -6.4  -3.91897   GGCTGCACTCAGAAA      CCCCGGTCACATCG TTAT CTATGCTCCCGGGG       ATTTCTTCCCTTGCC  66 82
        ydgH 1511030 .. 1511041 -  -5.8  -3.30124   GTGTAGGCCTGATAA                GGCA GGTA TGCC                 GCCATCCGGCGAGAA  56 62
 STM474_1484 1509018 .. 1509033 -  -6.8  -3.73224   GGACTCGTGATTAAA              GCTGCCC TGG GGGC-GC              TGGTCGTCGTATTGA  62 389
        rstA 1508081 .. 1508103 -  -9.1  -3.01712   TCTGTTTTTTGAACA           GTGGCGGTG ATGAG CATCGCCAC           TATGACTTGATAAAG  68 64
        ompN 1506489 .. 1506507 - -17.4  -5.45813   GATGAAAAAAGAAAA             GCCCGCCG AAA CGGCGGGC             TTGAGAAGAATTAAT 100 47
 STM474_1479 1504587 .. 1504635 -  -5.2  -2.75826   GATCTCAATACATTA GCTCTATCGCGCGCTGACGAAAA AGAT TTCCCGTCAGCGC-CGCTGGTGG GTTATAAAAGCAGGC  49 60
        rstB 1503206 .. 1503216 -    -4  -3.36327   TCACTTTAGTTACAA                 CATA CTA TATG                 TATAGCACAGTTCCC  50 67
         tus 1502146 .. 1502170 -  -8.5  -4.07535   AAGGCGCATAAAGAA          GGGCTGACGCT CAA AGCCTCAGCCG          TGGCATTAGGATACC  77 108
        manA 1497585 .. 1497606 -   -13  -4.38116   TCCATAAAAATGAAA           CCAGGCGG ATTAAA CCGCCTGG            AGGAGTTTTACGTCT 100 83
        ydgA 1495997 .. 1496020 -  -5.2  -3.12352   TAACGCAAAAGTAGA          GGCTGCGC GTCGTTCG GCGCAGAC           CGGGTGCAGCGTCGC  51 58
         add 1494238 .. 1494273 -  -7.6  -3.06133   GAACTGGGCATGGAA    TC-GGCAAAACATCGCG CGA CGCTGTGTCTTGCCTGA    GATGTCGCATTTCTC  60 100
        ydgT NONE
        ydgK NONE
 STM474_1466 NONE
        ydgM NONE
        rnfC NONE
        rnfD NONE
        ydgP NONE
        ydgQ NONE
         nth 1485229 .. 1485242 -  -5.3  -3.80114   CATGAAGTTATCAAA               GTGAT CCTG ATCAC                GGATAGATAGAATTT  59 192
        tppB 1483257 .. 1483279 - -13.5  -6.17184   ACGAGCAAAAAAAAA           GCCGCTAAC GCACA GTTAGCGGC           CTGAATGTTGTTTCC 100 48
         gst 1482553 .. 1482582 -  -6.4  -2.93708   TGCTGCTAAAAAGAG       GCCGGATGGC GGTACAGCGA GCTATCCGGC        AACATGACATTAATT  55 35
        slyB 1477213 .. 1477245 -  -2.7    -3.727   GTGACCACACGTAAA     GCCTGGTTTAGCGT GGAGAG ACGGTAA-CCTGGC      TGCCGTTGCTGGCCA  52 0
        ydhI NONE
        ydhJ NONE
 STM474_1448 1473328 .. 1473348 -  -5.3   -4.3665   GAAGTGAAAGATAAA            GCGCTCATG ATC CATGTGGGC            GGCGATAACATGTCC  69 76
 STM474_1444 1470928 .. 1470947 -  -6.4  -5.41941   TAAAGGAAATAAAAA            CGCCTG TTACTGCT CAGGCG             TTGCAATGATGGTCT  91 12
        nemA 1469747 .. 1469768 -  -7.3  -2.97058   AAGATATTCAAAGTA           TAGCGGC GATGTGAG GCCGCTA            TCAATGAAATTACAG  59 35
        gloA 1469269 .. 1469296 - -14.8   -4.2828   CGGGATGCAGTAAAA        CAACGGGCGCAG TGAC CTGCGCCCGGCG         GGGGATCAGTTACCC 100 31
         rnt 1468493 .. 1468510 - -11.3  -4.05446   CTGTGCAAGGAGAAA             GCGACCT GTAA AGGTCGC              TTTTTTACCGCCATC  91 69
        ydhO 1466941 .. 1466969 - -13.3  -4.20868   GGCGCAAAAGAAGAA        GTTATCCTGTCGT TAA ACGACAGGATAAA        ATATTAGCGAATTGT 100 29
        sodB 1466234 .. 1466255 - -14.5  -4.07885   TATCCCTCTCTAAAA           CGCAGAAGG CGTA CCTTCTGCG            TACTCAGACTTATGC 100 35
        purR 1464667 .. 1464680 -  -4.5   -4.2558   GACGTGGCAGCAAAA               CGAGGC CTC GCC-CG               CGCTGGCATGGCTGC  66 117
        ydhC 1462307 .. 1462326 -   -10  -2.91276   GGCTTTGTGAGAAAT            CCCACGGA CAAT TCCGTGAG             CCAGTTATCCGACGT  72 224
         cfa 1461058 .. 1461082 - -14.3  -3.72228   TAACGGAAAATAAGA          TTCCCCCGCAT GAA ATGCGGGGGAG          ATGATTAGCGAGGAA 100 30
        ydhE 1458786 .. 1458805 -   -10  -4.39828   AACATGTCGAGAAAA            TAGCCGCC ATGC GACGGCTA             TCGTCGTATTATCGC  87 34
        ssrA NONE
 STM474_1397 1432848 .. 1432863 -  -3.2  -2.78438   TACGACATGGTAAAG              CCCGTT AAAT AAGGGG               ATTCTACTATATCAT  43 181
 STM474_1396 1432126 .. 1432137 -  -2.2  -3.32343   CCTATAGTGTGATAA                CCTC CAGC GAAG                 CGACCACGTTGCGCC  45 0
 STM474_1394 1430531 .. 1430548 -  -7.7  -5.00616   GGCGTTTCGAAAAAA             TGGCCTC GCCA GAGACCA              GAATACGAACAACGT  91 457
        ttrB NONE
        ttrC NONE
        ttrA 1422956 .. 1422969 -  -2.3  -2.73067   TTCAATCACAGATTA               TGCGG TCAA CCGGA                AGTAACCCCAAATGA  40 263
 STM474_1387 NONE
 STM474_1386 NONE
 STM474_1385 NONE
 STM474_1384 1418600 .. 1418611 -  -4.4  -2.55551   CATAATGTCAATCGA                GCAA CTTT TTGC                 CTTCCAGGTCGATGG  46 6
 STM474_1383 1418316 .. 1418339 -  -2.3  -3.43773   GGTGACATCGAAAGA          GCGTGCAGA GGAATG TGTGCTCGC           GTTTCAGCCCAACGG  47 157
        pykF 1416731 .. 1416745 -  -8.5  -5.99154   GATTAAATAAAAAAA               GCGCC GGAAG GGCGC               TTTTTTAAACAAATT 100 58
        lppA 1416192 .. 1416210 - -14.6  -5.75342   TGTGGGTAAAAAAAA             TGGCGCAC GAT GTGCGCCA             TTTTTATTACGCAGG 100 46
        lppB 1415856 .. 1415906 - -15.1  -3.72695   AGCCTTTGCAGCAAA CGACGGACAA-A-AAAATGGCGCAC GAT GTGCGCCATTTTATATTGTGCGTCA AATTATTTACAGATG 100 28
 STM474_1372 1407130 .. 1407142 -  -6.2  -3.30124   GTGTAGGCCGGATAA                GGCG TTAGC CGCC                ATCCGGCTATGTTAC  59 277
        ydiK 1401944 .. 1401970 - -15.8  -3.56862   ATAAACGTCGCTAAA         GCATCGGGCGGC AAT GCCGCCCGACGG         GATTATGACTGCTTG 100 28
        ydiL 1401020 .. 1401030 -  -5.4  -2.62616   CGATTTTTCATATTA                 TCTG ACT CAGA                 GATGCCGCCTGAACG  50 151
        ydiM 1399558 .. 1399574 -  -5.1  -3.34239   TATATGTACATAACA              TGGCGTT TAA AATGCCA              GGTTTATTGCATTGA  54 255
        aroE NONE
        aroD 1396394 .. 1396404 -    -4  -3.33696   GCGGCTTTCAATGAA                 TATG GAA CATA                 TTCATGTCAGATAAC  50 91
        ydiF NONE
        ydiO 1393494 .. 1393541 -  -7.9  -2.54801   GACGGCGAAATATAT CTGATTTATTCGGCCTGA-TGCC GTAA AGCAGTCAGGCCGAATAAGAC-G TTCCGGTACGATCCT  59 40
        ydiQ NONE
        ydiR NONE
        ydis NONE
        ydiT 1388738 .. 1388751 -  -8.1  -3.68222   GGGCAAGCCGAATAA               GACGC CGTA GCGTC                GTTATCCGGTGTTTC  69 47
        ydiD 1387009 .. 1387038 - -19.3  -3.08283   AGAAGTAGTGTAATA       CCGGATGGCGGCG TTAA CGTCGCCATCCGG        CAATTTATACCGCAG 100 30
        ydia 1383445 .. 1383456 -  -4.4  -3.80516   AACCAACCCATTAAA                CTAG TTTG CTAG                 TACATCCTGCGGTTA  58 22
        aroH 1382223 .. 1382245 - -15.6  -4.21631   AACGCATCGAAGAAA           CGCCCATCCC GGC AGGATGGGCG           AGCTATTAAAAGCGG 100 31
        ydie NONE
         rfc 1366917 .. 1366933 - -15.1  -4.92385   CAGAGCCAAATAAAA              CGGCGGC ATT GCCGCCG              TATAACTTATTTATT 100 32
 STM474_1333 1363925 .. 1363956 -  -6.6  -3.16961   CTATAAGATGTAATA      TTGTACCGGGTTACG TTA CGTAACCCGGTT-AT      TCCGTGGTGACGCCT  59 40
        pfkB 1361882 .. 1361897 - -11.8  -3.01791   ACTGTGTTTTTAACA              GCGGCG GATG CGCCGC               CCGTTAACCGATTTT  81 71
        ydiZ 1361521 .. 1361531 -  -4.6  -3.50466   AAAAATACGAACTAA                 CGCA CAT CGCG                 GACGCGCCGCGGCGG  54 50
 STM474_1329 1360556 .. 1360578 - -12.1  -4.81851   ATGTAAACTGAAAAA           TGCCGGATA GCCCG TATCCGGCA           TGGGCTGTACCTATA 100 36
        yniC 1359136 .. 1359160 -  -7.8  -3.53012   TTTGTCTCTGTCAAA         GCCGCT-TGCC GTCT GGCTCAGCGGC          TAATTGCCCGTTGAC  67 58
        ydjM 1358421 .. 1358432 -  -4.4  -3.30038   TATATTCAAATGGAA                TGGT TTAT ACCA                 AAAATGATTTTGGCG  52 49
        ydjN 1356834 .. 1356864 -  -9.8   -5.5112   CTGACTAAGAAAAAA       CAAAACGCCGGT ACTGGAG ACCGGCGTTTTT       AGTGACAGACATTTT 100 89
        katE 1353714 .. 1353728 -  -2.8   -3.1211   GAGGAGATCACCGAA               GCGT GCTTTTT ACGC               ATTCTGGATGCCTCG  43 264
        nadE 1346928 .. 1346954 -  -3.7   -2.7535   GCTGGGAAGAGAGGA         GGCCGGATA GACGAGCGA TATCCGGCA         CAACAGTAGAAGTAC  45 43
 STM474_1313 1345876 .. 1345889 -  -3.8  -4.36127   CGCAAGAAGGTAAAA               TGCC TGCTGC GGCA                GAATAACTTTCCGCA  64 106
        xthA NONE
        nudg 1337130 .. 1337147 -  -4.1  -3.53012   GGTCGGGCTGGCAAA             CCAGAAC AGTC GTCCTGA              TATTCAGGTGAATGT  51 184
        gdhA 1335422 .. 1335444 -  -7.6  -5.41143   GAGCGGGCAAAAAAA           GCCCGCCTGC TGC GGAGACAGGC           CGTCAGACCGAATAA  95 70
        sppA 1329706 .. 1329746 -  -8.3  -2.79276   AGGACGTATTAATGA  TTATCGGATGGCGGC TATGAGCAGAC GCCGCCATCCGGTAT  GGCTATTGATGAAGC  64 42
        ansA NONE
        pncA 1327609 .. 1327621 -  -3.3   -4.2349   TTGCGACATTGAAAA                TGCAG TAA CGGCA                GCCGGATAAGAGGTA  60 372
        gapA 1325503 .. 1325520 - -11.3  -5.95166   TTTAAGCAAAAAAAA             GAGCGAC CTGA GTCGCTC              TTACCAATGACTGTG 100 51
        yeaD 1324241 .. 1324289 -  -3.1  -4.37886   TGACGCCGGATAAAA TGTGTAAGCGCCGCCATCCGGCA GGTCA TGCCTGATGGCG--GCTGACGCC TTTCAGATCCTATAG  62 63
        yeaG NONE
        yeah 1317239 .. 1317264 - -11.9  -3.91897   CTTGTTAGTGATAAA         TCAGCCCGTGA CTCA TTACGGGCTGA          TTTATGGTTATGCAC  93 33
        yeaJ NONE
 STM474_1285 1314385 .. 1314415 -  -2.5  -4.62069   TCTCTACGTGAAAAA       CGGCGTTGTCA TTAAATTGC CATCAACGCCG       CGTATTGCTAACAGG  65 180
        yeaL 1313775 .. 1313796 - -11.5  -5.03715   ACCATGTTTAAAAAA           GGCCTGGGG CAGA CGCCAGGCC            AGTATCTGACGGGCG 100 43
        yeaN NONE
        yeaO 1311154 .. 1311166 - -10.5  -3.91716   TTACTGCCGAAAGAA                GCGCC TCG GGCGC                TGTGGCTGGTTACGG  80 148
 STM474_1277 1310258 .. 1310288 - -14.3  -2.90219   CAGAACTTTCAGAGA       TAATAAAGGCTAC GACAG GTAGCCTTTATTA       TTCAAAATGAATTTA  89 38
 STM474_1269 NONE
 STM474_1268 1305914 .. 1305939 - -11.1  -3.41693   TGCATTATTAACGAA         CAGGGGAGGAG TAAA CCCCTCCCTTG          TTTATACTCTTCATA  80 233
 STM474_1260 1300804 .. 1300825 - -15.9  -2.52464   GTCGCCGTTAACGCA           CCGGGAACC CATG GGTTCCCGG            TATTGTCGGCAGAGA 100 43
 STM474_1254 1294953 .. 1294970 - -14.1  -4.90296   AAAATGGGATAAAAA             GCCGGCG GCAT CGCCGGC              TTACTGTTGTTATTG 100 35
 STM474_1253 1294258 .. 1294292 - -13.6  -2.96444   CGCTGGAATAATAAT    GCCTTGCCCGGCGTG CTCTCT CACGCCGGG-ATGGC     CGAAATAGTCATGAT  87 34
 STM474_1249 1291688 .. 1291699 -    -3  -3.30124   TCTGATGTGGCACAA                CATT GATA AATG                 GTTTAATAAAGATAT  45 203
        pliC 1290596 .. 1290628 - -13.4  -3.05384   GGCCTGGGGATTTAA      CCGCGCCAGAGCGT ATGCA AGACCCTGGCGCGG      TTGGCCGGTGATCGT  86 295
        pagD 1287951 .. 1287971 -  -3.9  -4.47707   CGTCAGGAAAAATAA            TGCCAGCTA TAT TTGATGGCA            ATCAAGATTTCCGGG  66 83
 STM474_1241 1287566 .. 1287576 -  -2.6   -4.3129   GAGTCATTAGCAAAA                 TAAA TCT TTTA                 GATTTTCGCCACTGA  60 134
        envE 1286690 .. 1286725 - -10.5  -2.94329   CACGTGGAAGTAAAG    GTCGCTAACCTGTTG TCGTGT CAAGAGGTTAGCGGC     ACTCTCTTCACAGCG  72 49
        msgA 1286264 .. 1286281 - -12.7  -2.89191   TTATATCGTCACAGA             CAGCGCC TCAG GGCGCTG              TTTTCGATCGGACAT  82 63
        envF 1284956 .. 1284968 -  -3.3  -4.04174   TGTCAGAGAATGAAA                TAGCG ATT CGCTG                TCTTCAAGCAGTGCC  57 99
 STM474_1235 NONE
 STM474_1234 NONE
        ymfB NONE
        mnma 1278384 .. 1278433 -  -2.8  -4.93877   TTGTATCAAATAAAA TACACTTCATCTTTTAAGCCGC TTTGAG GCGACTTGAATGGTGTTGTGTA TTGAATAATCAGACC  70 34
        hfld NONE
        purB 1276303 .. 1276331 - -12.6   -2.7955   AAACCAGACAAATAG        TCACCCTCTTTC TGAAG AAAAGAGGGTGA        GGCAGGCATTATTTA  82 34
        phoP NONE
        phoQ 1274054 .. 1274069 -  -4.7  -2.90723   GGATGCTTAACGAGA              TGCGT GGAAGA ACGCA               CAGAAATGTTTATTC  48 35
        ycfD 1272532 .. 1272547 - -10.4  -4.27117   CTGGCAGAATATAAA              CGTCGG CAGT CCGACG               TATCAATGGTGTTGT  90 355
        potA NONE
        potB 1267263 .. 1267288 -  -6.3  -2.53263   TTTATGCCGAAGGCA         TGAAGTTTACC CTTG AATAAACTTCA          TGCCTGGATGCGTGT  53 62
        sifA 1265791 .. 1265804 -  -6.7  -2.83867   GCAGCCAGGAAGAAG               CAAGC TGCC GCTTG                AAGCCGCGAATTTTA  56 207
        potC 1264885 .. 1264901 -    -5  -2.71011   ACGTCCCCTGAATTA              CGGGCC TTATC GGCCCT              TGGTTTTATCACGAG  49 15
        potD 1263647 .. 1263657 -  -4.6  -3.06831   TGAATCTTGAGCCAA                 GCCA AGT CGGC                 AGCGAGTTTGAAGAG  47 188
         mfd 1255002 .. 1255030 - -10.3  -2.85069   AATTTGTAAAGATTA       GGCCGGACG-CA GAGTAA TGACGCCCGGCC        TGACGCTTATGCAAT  72 32
        ycfS 1253877 .. 1253898 - -15.9  -5.74684   CAATAAAAAGAAAAA           GCCTCGCGA TGCA TCGCGAGGC            TTTTTTGTCGGTCAG 100 51
        ycfQ 1252434 .. 1252452 -  -2.4  -4.26351   GATCAATGCAAGAAA             GTGATACT TAC ACTACCAC             GCAGCAACGCTGTAA  60 266
        fhuE 1243971 .. 1243988 - -12.7  -3.44146   GTTGGGGAGAATTAA             GGCAGCC ATTC GGCTGCC              TTTTTTAATGGCGCT  93 66
         maf 1230615 .. 1230629 -   -10  -4.13945   AGCGGTATTTGAAAA               GCCTAC AGA GTAGGC               CGTTTATTGCTGTAG  82 29
         rne 1224460 .. 1224477 - -12.7  -5.25803   AAGGGGCATAAAAAA             GCCGACC TGGC GGTCGGC              TTTGTATCAGCATTT 100 44
        flgA NONE
        flgM NONE
        flgN 1212685 .. 1212712 - -10.7  -2.64472   GACGGCGTAAATTCA        GTGCCTGATAGC GCTGT GCTATCAGGC-C        TACAAGGCATTCAGG  74 74
        yceL 1207204 .. 1207226 -  -5.4  -2.86492   CGACAGGTATCAAAT           CAGGCGCCGG GTT CCAGCATCCG           GCGCGGCGTGCGTTT  51 2
        grxB 1206460 .. 1206482 - -10.6   -4.7657   GAAAAAGCTGAAAAA           GGCGGCAA GAAAGGG TTGCCGCC           TGGCGGGAGTTAGAT  95 35
        yceb NONE
        pyrC 1204602 .. 1204631 -  -3.7  -3.01712   GCCCCCTGTTGAATA       TACTGGATATA TATACAGT TAAATCCAGTA        TATAGCAACAGGTAA  47 50
        dinI 1204295 .. 1204310 - -11.8  -5.63517   TGCGCAAATAAAAAA              GCCGGG GCGA CCCGGC               AAACATACATCACTG 100 52
        bssS 1203754 .. 1203769 - -10.4  -2.73799   GCCAGAAATAAGTGA              GGCACC TTAC GGTGCC               TGAGAGAGGGGGAGC  71 49
        solA 1202538 .. 1202556 -  -9.5   -4.1822   GCTTACCTTAATAAA             CAGCCCC TTTAC GGGGCCG             ACAAATTATTGGCTA  84 31
        yceO 1202324 .. 1202338 -  -2.1  -3.68222   GCGCAACGGCAAGAA              CTGGCA TTAT TGCC-G               TGCTTCAACGTTATG  49 95
        yceJ NONE
        yecI 1200952 .. 1200991 - -12.1  -3.13403   TCCGGCTGAGTAATA  TTTTGCCGGATAGCGGC GTAAAG GCCGCTATCCGGCATTT   CGCCAGGCGTTACTT  83 35
        htrB 1198732 .. 1198751 - -12.2  -4.69464   AAAAGAGGGGAAAAA            TTGCAGCC TGAC GGCTGCAA             TCCTGTCAATAGCGC 100 31
        yceE NONE
        msyb 1196660 .. 1196678 - -10.3  -4.62783   GAGTGAGGTGAAAAA             TACCGGC GTGAT GCCGGTA             TTTTTATAGTGAAAT  91 279
        mdoC 1191042 .. 1191072 -  -4.6  -4.42464   AAGGTGTTAAAGAAA       GAACCCGCTACGCG TTT CTGGCAACGAGTTC       TGGTACGGTTGGCGG  68 86
        csgD NONE
        csgE NONE
        csgF NONE
        csgG 1184131 .. 1184151 -   -14  -5.86976   TCACAAAATAAAAAA            GCGTGGGG TTCTT CCCCACGC            TTTGTCGTATTCATC 100 39
 STM474_1129 1180847 .. 1180866 -   -10   -4.9755   ACATATAAGCAAAAA            GCCCGTAC TTCT GTACAGGC             TCTCAACTTAAATAT  93 201
 STM474_1123 1174402 .. 1174423 -  -8.7  -4.24948   TCATGAGATGTAAAA           GGCAGAGCA TTTA TGCTCCACC            AATGGTGATGCCCAG  80 199
 STM474_1122 1172569 .. 1172606 -  -4.3  -3.90707   CGGCATGAAAAAAAG   CGCGATGTAAGTA AAGGAGGGGGAA TATTTACATCGCG    TTGCCAACTTATGAC  59 183
 STM474_1121 1171488 .. 1171498 -  -5.4  -2.91264   CGCTTCACGCATACA                 GCTA ATA TAGC                 ATTGACTTTCAGAGC  51 125
        puta 1163885 .. 1163902 -  -9.1   -4.7373   TGACGCGAGTAAAAA             GGCTCCA TTGA CGGAGCC              TTAATTAACCACAGT  90 42
 STM474_1117 1163253 .. 1163270 -  -3.4  -4.84527   TTGATAGATGAAAAA             TCCGCGC TGATT GC-CGGA             TGGGTGCACAGCGGG  74 220
        wraB NONE
        yccj 1161261 .. 1161299 -  -8.1  -4.09511   AACACTGCTGCAAAA  TAGC-CATATGCCCCCGC GCAG GCGGGGGCGTTTGTGTTA   TACGTTTTTACGTTC  74 23
        cbpA NONE
        cbpM 1154968 .. 1154995 - -14.9  -2.78679   CGGGTGCATGTAAAT        CCG-GGGTGGGC AGAAA GCCCACCCTCGG        TTTATTGCCTTTATC  89 46
 STM474_1102 1153616 .. 1153638 - -17.8  -2.71325   GCAGGGATAAACCCA           CGGGCTGACA TGA TGTCAGCCCG           TTATGCTTTTGGCGA 100 387
        hpaR NONE
        hpaB NONE
        hpaC 1141411 .. 1141443 -   -12  -2.50443   TTAGATTGTATTAAT      CGCCGCGATTTATG GCGAG CAAACATCGCGGCG      GGAATAAAAATCTTC  79 100
        copR NONE
        copS 1138558 .. 1138571 -  -6.7  -3.35798   AGGTTGTATTGATAA               CCACA GCCC TGTGG                CAGGGAAGGGGAACA  61 56
        pipD NONE
 STM474_1085 1136283 .. 1136295 -  -7.7  -3.15503   TGGGAACATTCAACA                GGGTT AAC AACCC                TTTAAAAGGATGTGA  64 471
        sopB NONE
        pipC 1134058 .. 1134076 -  -2.4  -4.84527   CTTACACACTAAAAA             TGCTCC CGCAAAC AGAGCA             AAATGAGAGAGATGA  72 144
        pipB 1132581 .. 1132597 -  -3.1  -3.31188   GACTACAATTATGAA              TTATTTA AAT TAAACAA              TAATAGTGTTTTTAG  48 200
        pipA 1131742 .. 1131763 - -10.1  -4.04806   CGCCAGATTAAACAA           GGGGTTACC GAAA GGTAGCCCC            TTTGTTTTTTTAGGC  82 132
        ycca 1130553 .. 1130570 - -12.7   -5.0917   GTAGCAAAAAATAAA             GCCCTGC ATAA GCAGGGC              TGGAAGAGGGGAATG 100 45
 STM474_1076 1130085 .. 1130101 -  -7.9  -3.55801   ATCAAGTGGCTGAAA              GAGGGCG GGC CGCGCTC              TGCTCGTGTGGACAA  62 98
        yccW NONE
        yccV 1126651 .. 1126688 -  -8.5  -4.86731   GCTGGCGAAATAAAA   GTTTAAATGGCCGGATA TCGC TTTCCGGCCTTTTAAAT    ACAATCAGTTACGTA  89 30
        ycct 1125324 .. 1125335 -  -2.2  -3.05816   CGATTCCGTAGTTAA                CCTG TCTA CAGA                 TTACTGGAAGCGCTT  42 89
        mgsA 1124813 .. 1124839 - -15.8  -2.76737   GAGGAAGCCCTAAAG         CGCGGGCGGTAC AGC ATCCCGCCCGCG         TAGCGTTTATTTCAG 100 32
        yccF NONE
        yccS 1119963 .. 1119998 - -14.1  -2.55351   TCGGCGTACATGAAG   CGGC--GCTCCCGGCGA GTCG TCGCCAGGAGCTTGCCG    ACTGGGCTCATTCGC  81 41
        sulA 1118594 .. 1118627 -  -5.4  -4.80882   ATCGTACAGCAAAAA     TTGCGGAAACCGCTT CTGAC AAGCGTTCT-CGCAA     AAAAAACGTTAGCAC  76 94
        ompA 1117253 .. 1117267 - -12.8  -5.23316   GACCAGAGCAAAAAA               CCCCGC GAC GCGGGG               TTTTTTATCAGACGG 100 45
        lonH 1114812 .. 1114826 -  -5.7  -2.77895   TGTACGCTGAACAAG               TCCGA TCAGT TCGGA               ATAAAAGCGTTCAGC  50 16
        fabA 1114150 .. 1114174 - -18.7  -4.82901   GTCTCTTTAGAAAAA          GAAACCTCCGC AGT GCGGAGGTTTC          GCCTTTATGGGCTTT 100 81
 STM474_1052 1104672 .. 1104682 -  -2.4  -4.00348   TTCGAATTAACCAAA                 GAGC AAC GCGC                 GGAGCTGGTATTGAA  54 341
        msgA 1099579 .. 1099591 -  -2.7  -3.41024   TGTCTTAACATAATA                TACTC GCC GAATA                GTAATTTTGTTAATG  46 279
 STM474_1047 NONE
 STM474_1046 1098542 .. 1098559 -  -2.5  -3.91196   TCCACACATATGAAA             CCGCCAG TCGT CAGGCTG              AAAGTATAGGGCAGG  54 70
 STM474_1044 1097399 .. 1097419 -  -7.5  -4.82128   TCAGGAAAGAGAAAA            GCCAGTCGC TGT ACGACTGGA            TACAGGCGCAGTTGA  83 515
        sodC 1086477 .. 1086509 -  -6.3  -3.61654   GACAGTGACGTCAAA      GCTGGAACCTAGG TGCTTGG CGTAGGTTACAGC      TTCTGACCTTTAACA  62 121
 STM474_1017 1070277 .. 1070309 - -22.3  -3.14132   TGTGTTCTTTATGAA      TAAATATCCTCCGGC TAT GCCGGAGGATATTTA      TTATTTCCTCTCATA 100 218
 STM474_1016 1069646 .. 1069659 -  -4.5  -2.87931   GTGAGTCGTTACAGA               TAGCC GCCG GGCCA                GACACCACAACGGTA  48 58
 STM474_1000 1061573 .. 1061592 - -10.8  -4.91109   TTTGGAGCATAAAAA            TAGCACCT AAAG AGGTGCTA             CCTGTATGGATGAGT 100 50
 STM474_0996 1060734 .. 1060758 -  -4.2  -3.30159   TCAATTCGTGTAGAA          TGGAGGTGCC TTAAC AGCACCCCGA          TATATCTGGTTGTTA  50 102
 STM474_0995 NONE
        recT 1056665 .. 1056681 -  -5.1  -4.40572   ATAAGGCGCATAAAA              CCTCC TCAGGCG GGAGG              GCGTAACCCCTCCCG  68 47
 STM474_0993 1055937 .. 1055957 -  -3.9  -4.67048   TTATCGCAAAACAAA            CCGAAGAAC GCA GTTCGCCAG            CTATCTTGCGATTTT  69 489
        pncB 1053360 .. 1053386 - -12.3  -3.41745   TGGTCAGAAGAGTAA         CAAAGCGCCCA CTTTC CGGGCGCTTCG         CACAGGCATGGTTAA  90 37
 STM474_0988 1049588 .. 1049607 -  -5.7   -4.6526   AGAAACCTGTAAAAA            GTTCGCA CCTGCT CGCGAAC             CATTGAGAATTTAGG  74 65
        asnC 1048011 .. 1048027 - -13.7  -5.78622   TCAGGCGAAAAAAAA              GGCCAGC ATA GCTGGCC              TTGAGTGTGACGTAA 100 44
        ompF 1046300 .. 1046315 -    -9  -5.77988   AGAGAGATAAAAAAA              CAGGAC CGAA GTCCTG               TTTTTGAGGCATAAA 100 58
        aspC 1044918 .. 1044948 - -14.2  -3.50853   GTCTGGTAAGCAGAA       TGAAAAAGCCTGCA CAT TGCAGGCTTTTTTA       TCGGTCACGCCAGTC 100 50
 STM474_0976 1032811 .. 1032835 -    -7  -3.36991   CAGTATGCTTAAAGA          CGCCCGTAGC GATCA GCTTCTGGCG          ATGGTCGGCCCCGGG  58 251
 STM474_0961 1015195 .. 1015215 - -10.4  -5.26247   CGAAAATAAATAAAA           CGGGGCCGC AAAG GCG-CCCCG            TAATATAACGCAGCC 100 77
        focA 1013950 .. 1013967 -    -2   -3.1247   AGCTCGGACATGTAA             CACCTA CCTTCT TAAGTG              GATTTTTTATTTACT  42 63
        pflB 1011602 .. 1011621 -  -7.8  -4.79667   AAAAGTCATTAAAAA            GGCCCCAC TGAT ATGGAGCC             TTTTTTGTACGCTTT  86 67
 STM474_0957 NONE
        pflA 1009206 .. 1009227 - -11.6  -4.39568   ATCCAGACAGCAAAA           CGGCTACC GTCATG GGTAGCCG            TTTAAAAGCGGGTAA  93 53
        trxB  991718 ..  991734 - -12.3  -4.89063   CGACGCAAAAATAAA              GGCGACT TAT AGTCGCC              TTTTTTACTTTTGTT 100 56
        cydD NONE
        cydC NONE
         aat NONE
 STM474_0941 NONE
        infA  986831 ..  986847 - -10.1  -5.10497   AATGGACGCAAAAAA              GGCCGGT TAA ACCGACC              TTTTATCCAGCCGCC  93 62
 STM474_0938 NONE
 STM474_0937  984186 ..  984209 - -13.2  -3.69364   ATGCAATAGACATAA          TCCCCGC-CCA AAC TGGCGCGGGGA          GGCAAATTAACGCTG 100 32
 STM474_0935  983382 ..  983400 -    -3   -4.0219   CAACAAAATCAAGAA             CCTGAGCA TGA TGCTCCTG             CCGTTTATTACATCT  56 103
 STM474_0934  982378 ..  982397 -  -8.6  -5.49809   CAAATGCGAAAAAAA            GTCCGTAC TTTC GTACGAAC             TCTTTCTTGAATATG 100 252
        cspD  978282 ..  978302 - -12.6  -5.27335   GGCGTTAAATAAAAA            TGCCAGCC GATCG GGCTGGCA            TTTTGCCTCCTGGAT 100 62
        ybjX  973780 ..  973794 -  -4.2  -3.95324   GATCGGGAAGAAGAA               CGCGAA CAT CTCACG               GCGTTGCCTGCGCTG  60 283
        ybjE NONE
         hcp NONE
         hcr  968471 ..  968482 -  -7.2   -2.7464   AAGCGAGTGGTAAAT                CGCC CGGT GGCG                 CTGACGCTTACCGGG  58 63
        poxB NONE
        ltaA NONE
        ybjT NONE
 STM474_0919  962914 ..  962927 -  -5.2  -3.78329   GGCTATGAAGTCAAA               GCCG ATATGA CGGC                ACGCGAGCAGCAGCG  61 149
        ybjP  961189 ..  961219 -  -7.7  -3.97709   AGTAGGTAAGAAGAA      TTGTC-GGCATCCC GGGC AGAATGCCAGACAA       TTTACGGGGTTATGG  72 67
        artP NONE
        artI NONE
        artQ NONE
        artM  958044 ..  958070 - -10.9  -5.68039   AAATGGATAAAAAAA         GACGGACAGGT TAACC ACTTGTCCGTC         GGATTTATTCAATAT 100 118
        artJ  956928 ..  956948 -  -3.9  -4.93877   TTTGATGAAAGAAAA            TGATGCTCC GGC GGAGCAGTA            TCGCCGTCTGGGTCT  75 272
        grxA  944295 ..  944331 -  -7.1  -5.41143   CACCGGCGAAAAAAA    CGCCGATAGCGCCCTCC GTC AGAGGGCGTTGCCAGAG    CAATCAGGCGAAAAG  95 29
 STM474_0896  941732 ..  941742 -  -8.2  -3.09933   TTGTAACGGATCGAA                 CGCC GCT GGCG                 CGTGAAGCGATTTTA  60 253
 STM474_0894 NONE
        ybji  938865 ..  938878 -  -4.5  -3.48105   TGAAGTCAGTAAACA               CGCCT GGTT AAGCG                GCGGCAATGGGCTAT  52 189
        ybjG  936784 ..  936812 - -14.7  -3.70902   CCCTGGAGAGTTAAA        TAAGCGCTCCGCA CCA TACAGAGCGCTTA        ATATTACTCTTTTTT 100 48
        deoR  935967 ..  936001 -   -20  -3.09908   TTCTCGTAAAATAAC     TCCGTAGCCGGGTGCG CGT CGCATCCGGCTACGGG     CGGTTAATACATCAG 100 29
        yliJ  933599 ..  933609 -  -4.6  -3.06312   AAATTGTCGAGGGAA                 CGGC GCA ACCG                 GTTTACTACTGGAAG  47 304
 STM474_0886  932225 ..  932239 -  -8.6  -2.87132   CTGCTTTTTTATAGA               CTCAGT CAG ACTGAG               TATTTCGGCCTATCC  65 225
 STM474_0885  930777 ..  930796 -  -4.4  -3.21938   GGAAAATGGTAGTAA            TTTCAAAC CCTG GTTTAAAA             AAGGGCGTGTGATAG  49 513
 STM474_0877  922763 ..  922778 -  -8.2  -2.50074   GGCGGGATAACACAT              CCGGCA CCCG CGCCGG               GGGAGGTGGCGTTAA  59 37
        moeA NONE
        moeB  914179 ..  914197 -  -8.8  -2.87564   TTATCTGTTGATACA             GCACGGCC ATA AACCGTGC             TTTGGTATGTTTATC  65 51
        pflE NONE
        pflF  910535 ..  910552 - -11.3  -3.14211   ATCCCTTCTGATTAA             CAGGCCT GCGT AGGCCTG              TTAAACGTAGCGCCA  81 81
 STM474_0866  908138 ..  908165 - -10.6  -3.02144   GTAGGTCCGGTAAGA        CGGGTGCGCCC AGACAAA GGGCGCACC-G        CAGTTAAGCGGGCAG  76 54
     ybiV(2)  907246 ..  907263 -  -8.4  -3.92075   ATGCTCATTGAGAAA             TCGGGG TAATTG CCCCGA              CTCTCGTTAAAGTGT  76 32
        ybis  903117 ..  903143 - -19.6  -3.03243   ACTGATGCCGTAAGA         GAAGCCCGATAG TAT CTATCGGGCTTC         GCAGGCAGAGTCTGT 100 40
        ybiP  899333 ..  899350 -  -8.4   -5.0925   GGTGAAAATGAAAAA             TCCGCC TTTCGG GGCGGA              TTTTTTTTGCCTGAA  91 48
        ybiF  897429 ..  897455 -  -6.8  -3.61398   TTTGGTGGGTAATAA         TTCTCATTTT AATGTAA AAAATGAGAA         AAAATATGACAAAAA  64 124
         dps  896593 ..  896611 -  -7.4  -4.19953   TATTTAAGTGCAAAA             CCCCTG TGCCAGG CAGGGG             TATAGGGATGACTTA  74 162
        glnH  895469 ..  895509 -  -9.9  -3.40597   TCCGTCACGGAAAGA GCT-GTAGGCCCGGTGAGCG TCCT CACT-ACCGGGCC-ACAAGC CAACATCAGGTCGTT  74 41
        glnP  894727 ..  894738 -  -4.4  -2.95448   TTAAATTCAATCACA                GGAT TTTC ATCC                 TTCTTTCAAGACGAC  48 9
        glnQ NONE
        ybio  891446 ..  891463 -  -3.5  -3.90707   CTTTATTAAAAAAAT             GATT-GCT GAA AGCCAATC             CTTCCGCCGTCAGGT  56 224
        ybii  890128 ..  890140 -  -4.9  -3.41693   TTGATTATTAATTAA                TTCAA CGG TTGAA                TTTACCTTTCTTGTC  54 147
 STM474_0849  889567 ..  889588 - -13.7   -5.8187   TAGCGAATAAAAAAA           GCCCGTCCA GTGA CGGACGGGC            AAATAAGGGTAACAA 100 154
        ybiH NONE
        ybhG  882937 ..  882953 -  -3.6  -3.65046   CGTGCAGCGTAATAA              CGGCCT CACTC ATGCCG              TGCCTCGTCATTAAA  51 14
        ybhF NONE
 STM474_0842  880015 ..  880040 -  -8.3   -3.9941   GGCCTGATAAGCAAA         GCGCATCAGGCA TAA TGCCGGATG-GC         GGCGTGAACGCCTTA  76 75
        ybhR  878493 ..  878505 -  -4.8  -4.46212   TGCTTCAGGAGAAAA                GCCA TGAAG TGGC                AACAACGCGTTCGTG  68 388
        ybhP NONE
        ybhO NONE
        ybhn  875367 ..  875393 -  -5.9   -4.4009   TTTTACCGGATAAAA        CGCGTTGT-GCT GGAA AGCGAAAACGCG         TCTGCTTAAATTTAT  70 37
        ybhk  868527 ..  868554 - -13.6  -2.95894   CAGAAGAGGGAGAGA        GCCTGTTTAC-CC TTC GGTGTAAACAGGC        TTCTGATAAGCGCAG  87 59
        bioA  858029 ..  858045 -  -2.2  -3.36803   GAAGTGTAGCCAGAA              GCAGCA TCGCT TACCGC              TGATTAATGGCTAAA  45 29
        ybhB  857101 ..  857123 -  -5.5  -4.33417   GCCAGCGAGAATAAA          GCGCTG-GCG CACC CGCACAGCGT           GGATAGCCTGCCGAC  69 417
        ybhC  849516 ..  849550 - -13.5  -4.25104   TTGCTTGCAGTAAAA     CCACGGGCCGCCACA TCTGC TGCGGCGGCCCGTTT     ATAAGCCTGAACCGG 100 49
        ybhA  846968 ..  846986 -  -3.8  -3.72695   ATTCTCTCGATGAAA             TTCTCCAC CTG GCGGATAA             AGTCATGGTGCTGGA  53 492
        modE NONE
        modf  842124 ..  842138 - -11.4  -3.29263   AGAGTGGTTCCAGAA               TGGCGC GCG GCGCCA               TTCTGATAATACATT  83 40
 STM474_0802  841030 ..  841044 - -12.8  -5.44119   TTTATCCGAAAAAAA               GGCGCG TTA CGCGCC               TGGGAATGAAACGGA 100 55
        galE NONE
        galT NONE
        galK NONE
        galM  836417 ..  836439 -  -7.7   -2.8001   ATAATTCTCATTATA           TTGCCGCGA GGTGT TGGCGGCAA           TGCTTACGCATAACC  60 179
        gpmA  835587 ..  835601 -  -7.8  -3.30124   TCGTAGGCCGGATAA               GGCAGT TAT ACCGCC               ATCCGGCAAAGGTGA  65 41
 STM474_0789  826410 ..  826426 -  -3.7  -4.56597   TCTGGTTGCTAAAAA              TGAAGGA ATT TCTTTCA              TTTTGGACGCTGTCG  69 199
 STM474_0787 NONE
 STM474_0786  824120 ..  824155 -  -5.4  -4.57353   GTGCAGGATAGAAAA    CATATTGGTCCGGTAA CAGC CTACCGGACCGGTATT     ACCAATATTAATGTA  72 44
 STM474_0784  822282 ..  822299 - -11.3  -5.54907   CTGACAAAATAAAAA             GGAGAGC GAAA GCTCTCC              CGTTATCAGACTTTT 100 48
        ybgR  821239 ..  821265 - -13.6  -3.51934   GCCTGTGGATAAACA         GCGCGCGGGAGC GAG GATCGCGCGCGC         TTTCCCGTTAATGGT 100 33
 STM474_0764  808591 ..  808604 -  -3.9  -4.67904   CATTAACTTCAAAAA               TTGAT TTTA ATCAA                TATTTAAATGTTGGA  69 18
        gltA  795328 ..  795357 - -17.9  -2.79535   AAAAGGGAAAATGTA       CCGGATGGCGAGG GTTG CGTCGCCATCCGG        TTGTCAATTAACGCT 100 33
        abrB  794076 ..  794087 -  -4.4  -4.21194   CGGCATTATTGAAAA                GACA ACAC TGTC                 CTCACGCCCGTTTTA  62 120
 STM474_0732  775615 ..  775640 - -11.1  -2.87463   AAGGGGCGTGATACA         GGCCCGGTAGC GCAA ACTACCGGGCA          TTCTGCTATCAGGAT  75 34
 STM474_0729 NONE
        kdpA NONE
        kdpB NONE
        kdpC NONE
        kdpD NONE
        kdpE  765670 ..  765695 -  -9.7   -2.7471   TATAAAATATAATAT         CGCCGCGAAAA TAAT TATTCGCGACG          CCGAAAATAAATGAC  69 80
        speF NONE
        potE  761439 ..  761467 - -14.5  -3.18657   TCAAAGAGTGAAAAT        GCCCGGACTACCG TTA CCGCAGCCCGGGC        GCGCCATCAGCCGTG  95 32
 STM474_0720  760830 ..  760845 - -10.4  -5.12068   GATATGGAAGAAAAA              GGAGCC TTAC GGCTCC               TTTTTTGTATTAACG  93 104
        ybff  757597 ..  757635 - -13.1  -2.57244   TCAGCGAGGAAGCGA  CGCCAACGCCCGCGCGCG TAAT CGCGCACAGGCGATGA-G   TTTTTAATCAGTTAG  84 37
        ybfE  757165 ..  757182 -  -3.4  -3.37755   AGATATGCGGAAACA             GCAATC ACGCGG GACTGC              ACGCTCTGCTACACG  48 75
        fldA  756363 ..  756379 -  -6.5  -4.55128   ATGCCGAAATGAAAA              CCGCAAG TCT CTCGCAG              ATGTTAATAAAACTG  76 185
         fur  755769 ..  755786 - -11.3  -5.39721   GGAGGATATAAAAAA             GCCAACC GGGC GGTTGGC              TCTTCGAAAGATTTA 100 44
 STM474_0713  754771 ..  754786 -  -3.2  -3.14683   ACAGGGGTTTAGTAA              GCGTAA AGGG TTGCGC               CTGGCCATTCACCGG  46 3
 STM474_0712 NONE
        citB NONE
        citA  750493 ..  750505 -  -6.2  -3.34715   TAGCCGGCTGAAAGA                GGCG TACAG CGCC                TGTATCAATACCGCA  56 302
        nagB NONE
        nagA NONE
        nagC  741043 ..  741059 -  -3.7  -2.86177   ATATCGCAGATTACA              TTCTTGA TGG TCATGAA              CTACCCAGGGAATTT  46 69
        nagD  740124 ..  740135 -    -3  -2.80005   GAAAAATGAAAAATG                CAAT CGTC ATTG                 TTGATTAGTGAAAAA  41 194
        asnB  738318 ..  738333 - -10.4  -5.60993   TTTGCTATAAAAAAA              GAGCCC CTAA GGGCTC               TTTCGTCATCGTTAA 100 42
 STM474_0693 NONE
        miaB  733851 ..  733876 - -13.3  -3.23216   GGCCATGACCAGGAA         GCCCGACAGGCG TAG CGCC-ATCGGGC         ATTATTGCCTTTTCA  91 47
 STM474_0690 NONE
        ybeY  732139 ..  732171 -  -8.4  -2.57988   AAAGGCATGAATGTA     GGCCGGATAA-GGCG CAAG CGCCGCCATCCGGCA      AGCTACTATTCTGCA  63 31
        corc NONE
         lnt NONE
        gltI  728181 ..  728197 - -12.3  -5.76949   TACTCCGAAAAAAAA              GGGTAGC AGC GCTACCC              TCGAAGATTGTTGCC 100 148
        gltJ NONE
        gltK NONE
        gltL  725991 ..  726012 -   -13  -2.90714   GTAAAGCGTGAGATA           GCGCGCAC TCTGAC GTGCGCGC            CGGGAAGATTAGTGC  86 34
        rihA NONE
 STM474_0681  723659 ..  723692 - -11.9  -3.51633   AGAGAGTTTATAGAA     TAAAGAACACCAC-CC TCT GGCGTGGTGATCTTTA     TCAATGTCACGCCTG  88 32
        hscC  721938 ..  721952 - -12.8  -3.65529   ACAGGGGTAGTGAAA               GCGCCG TTA CGGCGC               TTTCGGCTCGTCAAT  95 17
        ybeQ  716296 ..  716316 -  -4.6  -2.74012   CCAGGATTTGAATCA            CCACGGCG TGTAT CACAGTGG            CGAAGTGGTGGGATT  45 197
        leuS NONE
        rlpB NONE
        holA NONE
        nadD  706224 ..  706237 -  -2.3  -4.07885   CAGCGCTGCGCAAAA               CGAGC GTCT GCTGG                CGGCGCTGCGCAATG  56 44
        cobC  704422 ..  704438 -  -5.1  -3.78934   GGCTGCGGAGAATAA              CAGCC TGTCGGG GGCTG              TCAATGGGCGAAACC  59 69
        ybeb NONE
        ybeA NONE
        mrdA NONE
        mrdB NONE
        rlpA NONE
        dacA  697808 ..  697838 - -13.5  -5.82316   ATTACGTAAAAAAAA      TAACAACTCCCGCC ACAG GGCGGGAGTT-TTA       CTGATGCATAGTATA 100 76
        ybed  697494 ..  697508 -  -2.1  -3.31461   GAGTTACCCGGATAA              GACCGG GTAA CCG-TC               TGGATGTATTACAAT  45 34
        lipB  696628 ..  696642 -  -8.6  -3.10597   TTGTTCACGGAAAAT               TCCTCA TCA TGAGGA               CTGAAGAGGCCATGC  66 159
        ybeF  695424 ..  695448 -  -4.9  -3.38768   GTATATCATTGATAA          GGGCCATAAAG CAG CCTGACAGCCC          GGCAAAATGTAAAAT  54 98
        lipA  694299 ..  694313 -  -8.5  -5.58454   CGCAGAGTAAAAAAA               CCGGC GAGTT GCCGG               TTTTTTTTGCCTGAA 100 62
        crcB  692641 ..  692657 - -10.8  -4.20042   AGCAAGATTTCAAAA              CCCGCC CTTTC GGCGGG              TTTTTTTTGCGCTTA  88 38
        dcuC  689839 ..  689869 - -13.9  -3.02043   AAGCCTGGTTTAAGA       TGCCGGGGCGATG TTTTC CCTCGCCCCGGCT       TACCGGCTATCAGCC  87 35
        citC NONE
        citD NONE
        citE NONE
        citF NONE
        citx NONE
        citG NONE
        citT  680339 ..  680364 - -15.5  -5.37345   TTTAATCATAAAAAA         TGCCGCTCAGG TGAA CCTGAACGGCA          TCATTTTTAACCTGC 100 54
         rna  679301 ..  679323 - -12.7  -5.07652   GGTCCCAAAAGAAAA           CCCTCACCG TCTGG CGGCGAGGG           TTTAACTCTCATGAT 100 179
         rnk  678780 ..  678799 - -12.2  -3.75897   AAGGGCTAACGGAAA            GAGGATGC GCAG GCATCCTC             TGTGTAAACGCATTA  93 58
        ybdQ  676810 ..  676836 - -20.2  -4.75372   ATGATGCAGTAAAAA         GCCCTGCCAGGC GTG ACCTGGCAGGGC         GTGTAAGTTTTTAGC 100 49
        dsbG NONE
        ybdO  667399 ..  667409 -  -2.6  -2.69964   GTGTTAACTACAGTA                 TATT CGA AATA                 ATTAACATAAAGGAT  41 147
        ybdN NONE
        ybdM  665190 ..  665212 - -11.9  -3.01712   CGTTTTGCGTCAATA           CGCCGGCGC AACTG GCGCTGGCG           GATATGCTGCGCGCC  76 353
        ybdh  662884 ..  662908 - -12.9  -3.19602   CTTTTTACATCAATA          GCCCTCTCC AGAATAA GGAGAGGGC          ATTTGAATGACAGGT  91 281
        fepB  654420 ..  654470 - -13.5  -3.14211   ATGCTGGCTGATGAA GGGGCGTTTATCCGACTGACCAAA TCGG TCTGGTCAGTCGGATAAG-ACTCC GATAAGGCTAAAACA  93 33
        fepD NONE
        fepG NONE
        fepC  650233 ..  650252 - -12.2  -4.14739   TGATTTACCCGAAAA            GCCGGATA GCGA TATCCGGC             TTTGTCATCAGTGTG  93 46
        fepA NONE
        entD NONE
 STM474_0603 NONE
        ybdJ  638687 ..  638719 -  -4.9  -4.29845   GAACGGAAGCTAAAA     CTGG-CGGCGCGCGA CCTGC TCG-ACACCGACCAG     AAGGTGTATGATATT  66 157
 STM474_0600 NONE
        ybdf NONE
        nfnB  636486 ..  636503 - -12.7   -5.1361   AGAAAGGTGAAAAAA             GCCGGAC GGGC GTCCGGC              TTAGGCAGGGGATTA 100 38
 STM474_0597 NONE
 STM474_0596 NONE
 STM474_0595 NONE
 STM474_0594  633809 ..  633823 -  -3.4  -3.53444   TTACCTCTCGTCAAA               GCAGGC CCA GCGCGC               TGGCAAGAAGCCCAA  50 6
 STM474_0593 NONE
 STM474_0592  631569 ..  631584 - -11.8  -4.66609   TAGTTCAGGGAAAAA              GGGGCG CTAG CGCCCC               GCAGAAGAAAGACCT 100 116
        ybdg  624645 ..  624661 -    -8  -3.05844   GCGTTTATTCGAATA              GCCGAA TGCTG TTCGGC              CTGTCCGTACAAGGC  60 487
 STM474_0587  621736 ..  621750 -  -4.2  -2.63549   CATCCGGAAGAATAT               CGTCAG CAT CTGACT               CATGAGGGCGAACTA  44 461
 STM474_0583  618696 ..  618740 -  -3.5  -3.28712   CGCCTTGCGGCATAA CGTGTGCACCCCGCCTGCGGC GTCAA ACTGCAGGCGGGTT-CAG-CG TACGTTTATCGTCCG  48 31
 STM474_0581 NONE
 STM474_0578 NONE
        yfdH NONE
 STM474_0576  614239 ..  614271 -  -9.1  -3.20858   TACGATATGTAGGAA      TCCCCGCCGCC CGTTACCCATT GGTGGCGGGGA      ACATTAATTATACAT  70 46
 STM474_0575  613074 ..  613088 -  -7.8    -3.322   AGTTGGATAGAGCAA               CGGCCT TCT AAGCCG               TGGGTCGCAGGTTCG  65 18
        fimW NONE
 STM474_0572 NONE
        fimY  610768 ..  610779 -    -3  -3.59781   AAATAATATGAAAGA                CTAA TTGT TTAG                 TATTTGTTATGTAAT  50 226
        fimZ  609360 ..  609372 -  -2.6  -4.37092   ACCTGGCCGACAAAA                CAGC TTCAC GCCG                CCGGTGACGCTACGC  60 397
        folD NONE
        ybcj  601935 ..  601968 - -12.5  -2.75307   AAGACAGCGTAATCA     GGCCGGATAA-GACGC TTT GCGTCGCTATCCGGCA     CTCTGTATCAGGCCA  82 33
        ybcI NONE
 STM474_0560 NONE
 STM474_0559  599607 ..  599629 -  -5.5  -3.97368   CGTGGAACGGATAAA          TCAGCGGCCC CGGC GGGCGGC-GA           GGCGTTTGAAGCGCG  63 448
        ppiB NONE
        lpxH  597125 ..  597135 -  -2.4  -4.08394   ACATGCGTCTTAAAA                 CTCC TGT GGTG                 CGGGACACGCTGCTT  55 121
        purE NONE
        purK  595462 ..  595476 -  -7.1  -2.80816   CGCGTATTGATGATA               CCCTG GCGGG CAGGG               CGGGAACCTGCATCT  58 89
        allD NONE
        allC NONE
 STM474_0547  587347 ..  587366 - -13.6  -5.71983   TTAAGCATAAAAAAA            GCCACGGT TCTC ACCGTGGC             AAAATCCAACATAGC 100 74
        ybbS NONE
        ybbB  573136 ..  573161 -  -6.1  -3.35197   CGCGACAGACACTAA         GCCGGCTCAATG TAG CGTC-AGCCGGC         AATAAAAGTAAGCTA  59 38
        tesA NONE
        ybbO NONE
        ybbN  563119 ..  563139 -  -3.9  -3.39521   TCCAGGAAAAGTTAA            GTTTGGGCG CAA CGCCGAAAA            TGGCCTCCGCCGGGC  49 389
        ybbK NONE
        ybbJ  560072 ..  560084 -  -5.5  -5.40474   ATGTGGCGAAAAAAA                CCGGT TTA ACCAG                CAAAGCCATTCGGTT  95 402
        copA  557397 ..  557426 - -18.1  -3.62597   CTGATGGCTTAATAA       TATATCAGGCAGC TGAT GCTGCCTGATATA        GCGTTTTTACGCTTT 100 32
 STM474_0518  556411 ..  556425 - -12.8  -4.36914   GCGCGTTGGAGAAAA               GGGCGC AAT GCGCCC               TGACGGGACGTCAAC 100 52
        ybaP  555495 ..  555514 -  -3.4  -3.11291   GCGACAATCTGAAGA            TCCGAAGC GAAA GCGTCGGG             ATAATAATAACGATG  45 83
        ybak  554484 ..  554494 -  -8.2  -3.89956   GTAGCACAGATGAAA                 CCGG ACT CCGG                 CGCCTATCCACAGCT  71 422
         fsr  551636 ..  551646 -  -3.2  -2.98592   TGAAGGCAAAAAGAG                 CACG GAA CGTA                 AAAGTGATAAGTATG  45 108
        ybaL  549395 ..  549416 -  -4.3   -4.4518   AAGCAAAACGTAAAA           CCCAGCATC CGCT GCTACCGGG            AGCTATTGCTGAATT  68 447
         aes  547287 ..  547332 -  -2.5  -5.00616   GCGGGCGGTAAAAAA TATGCGTACATTCCGGCGCTG AACG CGACGCCGGAACATATTGATA TGATGCTGAAACTCA  74 54
        priC NONE
        ybam NONE
 STM474_0499  537379 ..  537419 -  -3.9   -4.2803   TACGGCAAGCTAAAA GGCGGTGGGCCGCGCGC TTTATGAGT GCGCGCGGCGC-C-GCT AATGCGAAAGCGTAG  62 24
        acrA  531913 ..  531927 -  -2.8  -3.14878   CTGTTTAAGTTAAGA               CCTG GGCTGAG CAGG               TTGATCACCGCTTGC  45 5
        acrB  528701 ..  528716 - -11.8  -5.00616   TTTTTGCGTAAAAAA              GGCCGC TTGC GCGGCC               TTATCAACAGTGAGC 100 44
        ybaj  527835 ..  527851 -  -2.3  -2.79133   TAATGGTTTATCAGA              CATAAAT TCT ACCTATG              ATTGTAATAATTTTT  40 39
         hha  527496 ..  527507 -  -5.8  -2.91869   TAATAAAGTATTAGA                GGGA ACGT TCCC                 TGCTATTGCTATGTG  51 137
         maa NONE
        ylaC  526271 ..  526294 -  -8.1  -2.94322   AGTTCAGGGAAAGCA          GTGCGTACC AGGGAG GGTGCGCAC           TTTTTTATTACCGGC  61 33
        ylab  523828 ..  523844 -  -2.9  -4.16842   CGGATGCGCAAGAAA              CCAGCAT CCG ATGCCTG              ATGGGTTGCAATTGC  58 246
        ybaZ  523104 ..  523117 -  -2.3  -4.56597   GTGCTGTCGCAAAAA               GCGGT ACGT ACCGA                AGGTAAACAGGCGCC  65 353
        tesB  521747 ..  521761 -  -9.2  -3.17212   TCATCAGGCCATTAA               CGCCGC ATA GCGGCA               TGTTTTTTAATTGTG  70 32
 STM474_0479  514554 ..  514572 - -10.3  -3.14344   GATCTCTTCCAGCAA             GCCAGAC ATTCA GTCTGGC             TTTTTTTTGGTTTCT  74 39
        ybaE  511868 ..  511879 -  -2.2  -3.15663   AGTTATCCTGATCAA                TGAC GAAA GCCA                 ATATGGTAACGCGTA  44 63
        ybaX  510830 ..  510847 -  -5.5  -3.15396   AACATCAATATAAAT             TACCGTC GCCC GGCGGTA              TTGAGCGATCTATTG  50 335
        yajg  499575 ..  499590 - -11.8  -2.92091   ATAGGCATCTACAGA              CCCGGC TTCT GCCGGG               TCTTGTTGTTGCTAT  80 40
        ampG NONE
 STM474_0464  497847 ..  497859 -  -6.3  -3.35996   GATGTTGAGGGATAA                TTGGT ATA ACCAA                TGTAAAAATAAAACA  59 46
        cyoA NONE
        cyoB NONE
        cyoC NONE
        cyoD NONE
        cyoE  492798 ..  492818 - -11.1  -5.68039   AAATGGATAAAAAAA            CCGCCGTTT GTG ACACGGCGG            TTTTTTCAATAGCAA 100 47
        yajR  487365 ..  487375 -  -8.2  -3.29461   TAACGGTGTGGATAA                 CGCG GTT CGCG                 AGGTTGAGTCTCGTT  62 491
        apbA NONE
        thij  485586 ..  485600 -  -7.1   -3.2614   GATTGCGCATATTAA               TGCGC GTCTG GCGCA               GGGCGAACGCCCGTA  62 138
        phnR  482741 ..  482751 -  -3.2  -2.53379   AGAGAAATAAATCAG                 TCCA CGC CGGA                 TGATGCTGCGCTTAT  42 109
        phnS NONE
        phnT NONE
        phnU  479638 ..  479648 -  -5.4  -2.84602   TTTAGGTGACCAAAT                 TAGC ATG GCTA                 GCTCCTTACGCCGGT  51 23
        phnV  478432 ..  478462 -  -6.2  -4.37711   CCATTAAAGCGAAAA       TTGAAGCCGAAG AAGAAAA CTTCGACTTCAG       TATTCTCGATAAGGT  73 409
        xseB NONE
        ispA NONE
         dxs NONE
        yajO  472710 ..  472725 -  -4.6  -3.25472   AGACGGCGAAAGATA              TGGGCG TACA CGACCA               CGGCAGTATTGTCTG  49 385
        yaji  467929 ..  467939 -  -6.8  -4.21812   CGGGAGTGAAAAGAA                 CGCA ATT TGCG                 TTTCTAAATATTTCG  72 272
         tsx  466988 ..  467011 - -12.4  -2.72144   GCATGCGCCCGAAAC          GGGCCAGAGG ACGA CCTCTGGCCT           TTTTTGCAGGTTTAG  82 37
        yajB NONE
 STM474_0421  457523 ..  457540 - -12.7  -5.28176   CTTACGCATAAAAAA             GGCTCGC ATTC GCGAGCC              TTTTATCAATGCACT 100 44
 STM474_0417  452365 ..  452380 - -10.4  -3.31799   TATAACTTTCCATAA              GCCAGC GGAT GCTGGC               TTATTTTCTTTGCAG  76 193
 STM474_0414 NONE
        sbcD NONE
        sbcC NONE
        araJ  444237 ..  444248 -  -5.8  -3.29144   TGAGCGCCTGTACAA                GACG GTTC CGTC                 GCTGATGAAATCGTT  54 159
        rdgC  442201 ..  442215 -  -4.2  -2.95223   GAAGGGGAGTATACA               TTTGGC ACC GCCGAA               CCCGAAGAGATGACG  46 225
        proC  438694 ..  438736 -  -2.8  -4.18676   TTACAAAGCAAAGAA TGCCGGACGT-A-ACCG-CAC CGAA GTGGCGGCATGACGTCCAGCC GGGCTTCAGGATTTA  58 31
 STM474_0399  436864 ..  436874 -  -5.4  -4.19704   TAATCGTATTTAAAA                 CAAC ACA GTTG                 TTATAACGTTACTTT  67 26
         ddl  432994 ..  433021 - -12.8  -3.70674   GGATGAGGTAAAAGA        CGCCCGATAAACG TTG CGCT-ATCGGGCG        TGCGCTATTACATCG  95 33
        yaiY  432044 ..  432062 -  -8.8  -4.13767   TGGCCGAGGCCAAAA             CGGGCAAG ACG CTTGCGCG             GGAAATGTTGCCCGG  80 175
        ampH  428303 ..  428338 -  -3.9  -5.19251   GAATATTAACAAAAA    TGTTGCGCCTCGT-CT GATAT AGCGCGAGGCGCGACG    ACTCAGGATGCAGGA  79 28
        hemB  423135 ..  423153 - -13.8   -3.5936   TGTAAAGTCGGGAAA             GGGCGGCA GCG CGCCGCCC             TGTAACAGAATTAAC 100 36
        prpR  415457 ..  415481 - -12.2  -4.91511   ATTGCATCATAAAAA         TACCCGCCTGG GTTT CC-GGCGGGTA          TATTTATTCCTGGCA 100 117
        yahN  413948 ..  413963 - -10.4  -3.05816   TTATGCTCCACGGAA              CCAGGC CAGC GCCTGG               CTAAGCTACGATGTG  69 360
 STM474_0366 NONE
 STM474_0365 NONE
 STM474_0364  391857 ..  391906 -  -9.7  -3.10344   TTTGCAGGTAATATA TGCCTGTTTAGCGCGCGCGCCGC ACTG GCGACGCGGGCGCTATTTGGGCT AACCTTGCTTTTTCT  71 24
        stbA  383852 ..  383877 - -13.3  -4.19817   CCTAGCGATTGAAAA         TGGTCTGGCGT TTCA ACGCCAGACCG          TAGCGACAATTATTT 100 35
        stbB NONE
        stbC NONE
        stbD NONE
        stbE  378268 ..  378286 -  -3.2  -3.63991   TATGATGCGTAATAA             TAATACGT TCT ACACATTA             ATTGAATCAGATAAT  51 198
 STM474_0349  376562 ..  376580 -  -3.1  -3.09286   ATATTACGGTAAAAC             TCACGCT AACGG ATCGTGA             AGTGGATCTGGTGGA  45 496
 STM474_0340  368166 ..  368218 -  -9.3  -2.84098   GTGCGTAATTAATGA CGAGCGGTGCAAAAATAGCCGGTTG AGTAG CAA--GGCTATTGACGCACCGCCCG GTTAGTTTTAACCTT  67 482
 STM474_0336  365568 ..  365584 -  -3.7  -3.07655   CCCGGTAAAAAACAG              GAAGGTT TTT AACGTTC              GGTAATGAAAGATTT  47 17
        phoE  364408 ..  364435 -  -6.3   -3.2964   AAACTGTCGGCATAA        CCCTGCTGCCAT GCCTG ATGGC-GCAGCG        CCATCAGGCACAATG  59 48
        pepD  360060 ..  360096 -  -9.5  -4.66318   AGCACGTTAATAAAA   CCGACTCGGCA-GTGCG GGCCA CGCACCTGGCGAG-CGG   GATTAGCGTGAAGGT  91 380
        yafK  356256 ..  356277 -  -8.7  -3.91798   TAACGGGGAATGAAA           CCTGGCAAA AGAT TATGCCAGG            CGAATGGGCGTTATT  73 36
        fadE  352038 ..  352055 - -14.1  -5.08088   AAGCGGCAAGAAAAA             GCCCCGC GAAA GCGGGGC              AGGAAAGACACGAGA 100 45
        yafv  351174 ..  351194 - -11.8  -2.97676   ACGGAGTGAAACAAT            CCCGCCGC GGTGA GCGGCAGG            TTGCTTACAAGGTGA  80 30
 STM474_0322  350389 ..  350412 - -11.8  -3.87815   CCCGACCTGGATAAA          GCCCGTTATC CCGG AATAACGGGC           AAAAATATTTACTCA  93 34
 STM474_0321  349094 ..  349140 -  -8.7  -2.55544   TGATGACTGAATTGA GGCATCGAGATATG-CGACTGG TCAG CCAGTCGTCTTTTGACGATGCC CAATACAAAACATGA  63 256
 STM474_0309  339803 ..  339818 -  -3.2   -4.9138   AGGATTGAAACAAAA              CATCTG GAAC CGGATG               AATAATGTGTAAAAG  72 139
 STM474_0307  338770 ..  338795 -  -5.5  -3.90163   AATGAAAATAAAAAG         CCGGGAAAGA TCTTTTG TCTT-CCCGG         ATTTTATTATTTAAT  63 36
 STM474_0282 NONE
        sciE NONE
 STM474_0280 NONE
        vasA NONE
 STM474_0278 NONE
 STM474_0277  304382 ..  304406 -  -8.6  -5.95166   GTGAAGTAAAAAAAA          CCGTATCACT GTAAA AGGGATACGG          TTTTTTTTCGTCTTC 100 275
        rnhA  302855 ..  302872 -  -2.6   -2.7976   GGCAATATCGCAAAC             CGGATG GCTAAG CTTCCG              CCTGGTAGCCACTAT  41 15
 STM474_0272  301311 ..  301323 -  -3.3  -2.93623   TTGCTTAAAAGACGA                CCGAT CAT AACGG                CGAAGTTAGCGAATG  44 55
        mltD  299869 ..  299889 - -11.1  -4.31085   TATAGCAATTTAAAA            GGCGCCG GGGGAAG CGGCGCC            TTTTGGCTTTTTCGT  90 50
        yafC  295752 ..  295765 -  -8.1  -3.35088   AAATCTGGCAAGCAA               CCTGC TGGC GCAGG                ATCTGCATCTGGATG  64 144
 STM474_0258  288756 ..  288766 -  -6.8  -3.53444   GGACTGGGTGTTAAA                 CAGC CTT GCTG                 ACCTGCCATCAGCGA  60 131
        metN NONE
        yaeE NONE
        metQ  285459 ..  285476 - -12.7  -3.64915   TTGCATAAATGACAA             GACGGGC AATA GCCCGTC              CTGAATAATATTACA  95 63
        rcsF  284987 ..  285011 -  -2.1  -2.90349   TGTTCAAACTGAAAG          CTGCTCATTTC GCC GAAATATTCAG          GGCGGACCCGATACA  41 5
        yaeB  284206 ..  284224 - -13.2  -3.13343   AGTTGAACGATCGAA             CAGGCTCA ATG TGAGCCTG             ATACAAAAAAAGTGA  91 88
        proS  282390 ..  282410 - -16.9  -4.72497   CACTCACTAATAAAA            GGCCTCGCA GGG TGCGAGGCC            TTTACATATCTGCCG 100 73
        yaep NONE
         rof  279807 ..  279838 -  -3.7  -5.04868   GTAAATTAAAGAAAA     TCTGGCAGGAGCAGG GGAT CCCGC-CCTGGC-GA      CGAGATACCACGCCG  77 229
         map  252831 ..  252861 - -16.3   -4.7497   GCCACCCATTAAAAA      GCCGGATAATGGCG TGAA CGCC-TTATCCGGC       CTACGTATTTATCTT 100 212
        glnD NONE
        dapD  249256 ..  249271 - -11.8  -2.84878   CGCCGTAATGCAAAG              GGGGGC TGTC GCCCCC               GCTTTTCACTCGCTT  80 39
        yaeh  247312 ..  247329 -  -5.6  -3.09452   ATCCGGCAACACACA             GCTTAC TTACGG GTAAGC              TTGTCCAGATCGGCT  52 10
         pfs NONE
        btuF NONE
        yads  240352 ..  240366 -  -5.6  -4.68994   ATGACCATCGAAAAA               CAGGGC GTT GGCCTG               GTGGTTGACCCGATG  76 264
        hemL  237155 ..  237180 -  -7.6  -6.23209   TGAACCAAAAAAAAA        CCGGGT--GGCG GCTT CGCCTTACCCGG         CCTACGTTGTTTCTG 100 52
        ligT NONE
        sfsA  216976 ..  216987 -  -5.8  -4.25283   ACCCTGTGAGGAAAA                GCGT ATTT ACGC                 ACGCGGCCAGAATAC  67 64
        dksA  216389 ..  216401 -  -6.2  -3.61244   TAGGGTAGAAACGAA                CGGG ATTAA CCCG                CCATCTGTTTTTCGC  62 18
        yadB NONE
        pcnB NONE
        folK NONE
        panB  212446 ..  212458 -  -9.1  -3.30124   CTGTAGGCCGGATAA                GACGC GTC GCGTC                GCCATCCGGCACGGT  71 49
        panC NONE
        panD  210876 ..  210894 -  -4.4  -3.79533   CAAAGCAGCAAAAGA             CGCCGGTT TCC ATCTGGCG             GTAACCACGGTGAGA  58 158
        stiA  208352 ..  208373 - -11.5  -4.68209   ACCTCAATAAACAAA           GGGGCCAGC CGAC GCTGGCCAC            CAGGATCAGTTATAT 100 31
        stiB NONE
        stiC NONE
        stiH  203979 ..  203992 -  -3.8  -3.27525   CTTGTCGAAACCCAA               CGCT TCTCTC AGCG                AATCTGAATCTCCAG  48 20
        yadF  201359 ..  201391 -  -8.4  -2.95459   AGTAAGCGCAGAAAT     GCCGGATGGCGTCGC TAAA GCGACTT-ATCCGGC      CTATAGCTAATGGCT  65 40
         gcd  198189 ..  198208 -   -15  -3.30124   CGCCACCCGGCACAA            TGCCCGGC ATAC GCCGGGCA             TTAATGGTTATTTCG 100 33
        yacc  195932 ..  195951 - -12.2  -3.71487   CATCATAGCTAACAA            TGACCGTG GATG CACGGTCA             TTATTTCAGCAATAG  89 53
        speE NONE
        speD  194200 ..  194220 -  -6.1  -2.71731   GCCAGTGGTGAATCA            GACCGCA GAAATAT TGCGGCC            GTAGTAAATCTCGCG  53 2
 STM474_0168  188310 ..  188325 -  -4.6  -3.57144   GCGCTGATCGGCAAA              CTGCCG ACGC CGGAAG               AGTACCAGACCTACG  52 211
 STM474_0165  182887 ..  182910 - -10.3  -2.67694   AGCATCAGCAGATCA          CCCACACGC ATGAAG GCGTATGGG           CGGCTAATTCCGGCA  66 161
        aroP  173343 ..  173366 -   -16  -3.51924   CTGTGAGGCAGATAA          CACCCTCCCC GGAC GGGGAGGGCG           GAAAAGTAACGCCAC 100 43
 STM474_0157 NONE
 STM474_0156  170681 ..  170695 -  -3.4  -4.17701   CTGACAAAGTAGAAA               CCCCCA AAG CGGCGG               TGTCGATGGCGAAGA  58 194
        nadC  168345 ..  168367 -   -17  -2.91582   CAGGTGATTTATAGA           CCCGACGGCG CAG CGCCATCGGG           TGGAGAGGATCAGCA 100 35
        ppdD NONE
        hofB NONE
        hofC  165074 ..  165088 -  -3.6  -3.71848   CGGGTGCAGGAACAA               GAAAAC CGC ATTTTC               AATAGCCTCTAATAT  53 68
        coaE NONE
        yacf NONE
 STM474_0145  162093 ..  162122 -  -4.9  -3.35996   TAGGGTCAGTGATAA       CGCGCCGAGGT TTTCATCC ACCCTGGCGCA        GTGGCGGCTACGTTT  54 170
        leuL  133789 ..  133806 - -14.1  -5.64274   TCAGGCATAAAAAAA             CCCGCGC AACG GCGCGGG              TTTTGTTTGACTTCG 100 48
        leuA  132173 ..  132185 -  -3.3  -2.62263   AGTTCTTCGACATTA                CACGG TTT CCTTG                TTGTTCTCTTTATTT  42 10
        leuB NONE
        leuC NONE
        leuD  128927 ..  128945 -  -8.8  -5.28826   AAATCGTATAAAAAA             TGCCGGAA TAT CCCCGGCA             TGAGCGACTGATGAG 100 140
        sgrR NONE
 STM474_0112  126701 ..  126725 -  -7.2  -3.62518   TTAAAGAGTGGCAAA          GGACTTGAGA GGTAG CCTCAAATCC          CTTCGCCGGCATTAT  67 18
        tbpA NONE
        thiP NONE
        thiQ  122915 ..  122931 -  -6.5    -3.273   GGATAAAACCGAACA              CGCGCTG CAT CAGCACA              GTATGTTCACGATCC  56 507
        araB  119577 ..  119587 -  -2.4  -3.48529   ATAATTATCAAAAAT                 CGTC ATT GTCG                 TGTCCTTAATGAGTC  47 31
        araA  118049 ..  118070 -  -4.3  -3.53811   CGTAGGCCCGGTAAA           CGCAGTGCC ACCG GGCAATCCG            TTTCACCAATTAACG  54 35
        araD  117212 ..  117231 - -12.8  -3.20858   GACCAGATTCATCAA            CGCGCCCC CCAT GGGACGCG             TTTTTAGAGGCATTA  86 38
 STM474_0102 NONE
        polB  112993 ..  113022 -  -3.5  -2.66435   ATTGCGAGTATACGA       CCCCGCTACCA GGCTAATG TGGTAGTGGCG        TTAATTAGGTCCAGG  42 88
        hepA NONE
        rluA  108988 ..  109026 -  -8.7  -3.21099   GGCGGTTATCATCAA  CAGTCCG-GCGGCGGCTG GCAG CAGGCGCAGCGCGGCCCG   ACGCTGGAAGATGCC  65 333
         imp  105780 ..  105790 -  -8.2  -3.35813   TTCCATTTCAATTAA                 CCGC AAT GCGG                 ATTACGTTGTAAATC  65 48
        surA  104488 ..  104498 -    -4  -3.11569   TTAGTTACTCAAAAT                 CTTA ACG TAAG                 CGCTGGCGCGCTGTT  47 0
        pdxA NONE
        ksgA NONE
        apaG NONE
        apaH  101348 ..  101403 -  -9.1  -3.53811   CGGATGGCGGCGAAA CGCCTTATCCGGCCTAC-TCTTGAGCC AGAT GTCGCCAGATGTAGGCCTGATAAG-CG TAGCGCCATCAGGCA  73 49
 STM474_0087   94380 ..   94391 -  -3.6  -4.11371   CAAGAGGGGGTAAAA                GGGC AGGG ACCC                 ATGGTGATAGCATTT  60 408
 STM474_0083   91677 ..   91695 -  -5.2  -5.42259   CCATGCGTAAAAAAA             TCCTGCGC CAT GCGAAGAA             AGTGGGCTTCATTAA  95 361
        caiT NONE
        caiA   85446 ..   85479 - -13.1   -2.8294   TAGGCCGGATAAGCA     CAGCGCCATCCGGCA TGAT TGCCTGATGGCGACG      CCCCGCGTCTTATCA  85 58
        caiC   82535 ..   82565 -  -5.3  -2.76418   TCTCCAGATAAATAG       TTTTCCGGCGGGA GGGAT TCCTGCCGGAAGG       TTTATTTCAGATTTT  49 27
        caiD   81660 ..   81702 -  -7.8  -2.60496   TGGCGGCGTAAACAC CTTATCCGGTCTACGG TTGCGCATGTG CTGTAGGCCGGATAAG CGAAGCGCCATCCGG  59 51
        caiE   80785 ..   80806 -  -5.1  -3.53224   CAGCGTCTGGTGAAA           GTCGTGAGT ATCG ACTCTCAAC            TCTATCGCCGATTGA  55 242
 STM474_0068   74896 ..   74914 - -11.8  -3.99405   TTAATTGATTACAAA             GGGCAATA TAT TATTGCCC             TTTTGTTTTTGCCCC  93 78
 STM474_0060   67037 ..   67047 -  -2.4  -3.06696   TTTGCTGCCAAGACA                 CCGC CGT GCGT                 TTTTTTACACCATCA  42 30
        oag3 NONE
 STM474_0058 NONE
 STM474_0057   63518 ..   63540 - -12.1  -4.27192   AAATTTGGATGAAAA           TGGGATACG ACATG CGTATCCCA           TCCACTATTACATCG  95 33
 STM474_0056 NONE
 STM474_0055   60745 ..   60765 -  -3.2  -3.89346   GCTGGACGTTACAAA            TCAGGCAA TGCTC TCGCCAGA            TTTTCTGAATAAACT  54 366
        rpsT   52234 ..   52248 -  -8.5  -5.64274   GCAGGCATAAAAAAA               CCCGC TTTAC GCGGG               TTTTTCTACAAAGCT 100 57
 STM474_0045 NONE
 STM474_0044   48335 ..   48367 - -14.9  -3.06492   GTACCTACCGTAATA      CTTCCGGCTGCGG TATTAAC CCGCAGCCGGAAT      CATTCTACAAGTTCA  89 30
 STM474_0037   38703 ..   38735 -  -9.2  -4.74052   ATTAAAGAAAAACAA      TGCCTGTAGTCGTG TCATT CACGACTACAAACC      GGGGAAATTAAGTAA  90 63
 STM474_0036   37065 ..   37095 - -16.3  -2.87274   TTGCATAACTAAGTA       TGTTATGCGGCCG GTTAT CGACCGCATAACA       TTATGGCTTATTTGC 100 33
 STM474_0034   34270 ..   34287 -  -2.7  -5.16472   AAAAATGTCAAAAAA             CTGATAT CAAC ATTTCAG              TCGACCTTTCTTTTT  79 114
 STM474_0031   32420 ..   32434 -  -4.2  -3.49738   AAGATAAGCAATTAA               CAGTGC TAC GCATTG               TCTATGACTGAACCG  52 136
 STM474_0018 NONE
 STM474_0017 NONE
        yaai   10837 ..   10851 -  -2.8  -3.70022   GGAATAGAAATAACA               GCGA TTAATCG TCGC               CAATGACTTTAAGTC  50 15
        yaaw   10057 ..   10080 -  -8.2  -3.69395   TCTATGATCTAATAA          GGGGGAAA AGAAAATA TTTCCCCC           AGTGAGGGCATTCAC  69 37
        yaah    9339 ..    9371 -  -7.7  -2.67903   AAAATACTGATAGTA      GGGTTATTCCTCCCG GTG CGGGAGGAATAAAAG      AGATTTAGTGCGCCT  59 30
        yaaJ    5907 ..    5929 -  -4.2  -3.05463   AGTCCTTGCAGGGAA           TTTTCTGCGA CTT TAGCAAAAAA           ACGCCGCAGAGTTGA  47 62
        yaaa    5021 ..    5060 -  -9.3  -3.62775   ATGACCCGCCAATAA CCATTGCGCCCGGT-GGCG CTGT CGCTTACCGGGC-CTATGG  GGTGGTGTCGATTTG  75 79
