STM474_p1005 NONE
STM474_p1006    7609 ..    7633 +    -5  -5.28176   CGCCTGCAGGCGTAT         TCA-CGGCGGT ACCC GCCGCTGCTGA          TTTTTTATCGCTGAC  90 270
        finP   33993 ..   34039 +   -30  -3.43564   AATGTCCGGGAAGAA TAACATAAGTAAAGCCCCGAAA AAT TTTCGGGGCTTTACTTATGTTA TTATGACTTACATTC 100 289
        samA NONE
        umuC   48061 ..   48074 +  -3.1  -4.24745   GCCTGAGAAATCAAT               TTCAG TATA CTGGA                TTTCTGTTCGTCGTC  62 324
STM474_p1057 NONE
STM474_p1058   51529 ..   51554 +  -2.5  -3.55444   GAATTTATCTGTCGG         C-CGCTGTCGTT AAA ACCGACATCGAG         TTTGGCCCGTGAGAG  47 175
STM474_p1061   53064 ..   53078 +  -3.4  -4.20516   TCATCATCACGCATT               CTGGCC ACC GGTCTG               TTTATTGCCTGAAAG  60 230
STM474_p1064   54930 ..   54953 + -11.2  -3.16881   TAAATGCATGATTAA          TGCTAATGTA TGCG TACATTAGCA           TTAATCACATAAGTC  76 38
STM474_p1066   56425 ..   56445 +  -9.8  -3.95126   AAACGCACAGTCTGG            TGAGACAG TTTTT CTGTCTCA            TTTGGGTTGTTTTTA  79 138
        rlgA NONE
STM474_p1068 NONE
STM474_p1069   59772 ..   59782 +  -2.4  -4.99134   TTATCACCTAATGTG                 AGCC GGT GGCG                 TTTTTCATTTGCAGT  70 112
        spvR   62552 ..   62566 +  -2.8  -2.83112   CGTCAATCTGACACA               GAATCA GTT TGATGC               TCTGGTGGATTACCT  42 164
STM474_p1074   62884 ..   62898 +    -5  -4.65263   GACATTATCAGTCTT               CAGGAT TTC ATTCTG               TTTATTTTCAGGAGT  71 158
        spvA NONE
STM474_p1076   63836 ..   63857 + -10.1  -3.54741   AAGCAGAAAATATAC           CTGGCCATC GTCA GACGGCCAG            TTTCAGGAGATAGTG  77 39
        spvB   65708 ..   65721 +  -2.3  -4.66163   TATAAGGGGTTATAC               TCCGG AACC CCAGA                TTTTTCCGTCACCCT  67 84
        spvC   66688 ..   66700 +  -3.3  -3.70674   AACGGAACAGTAAAC                GCCGT TAA ACAGC                TATTTTAAATGCTCA  53 58
STM474_p1079   66856 ..   66866 +  -2.6  -3.52021   CATAAGCAAGAGCGT                 TTTT TGA AAAA                 TATTATATTTAATGT  49 53
        spvD   67671 ..   67681 +  -8.2  -3.53444   GATATAAGGCGAAAA                 GCCC GAA GGGC                 TTTAGGGCAGGCTAC  69 130
        ydcA   69001 ..   69018 +  -6.9  -4.08216   GACGCTCTTCGTAGT             CCTCCAC ATCC GGGGAGG              TTTTCCAGCCGGTCA  70 502
STM474_p1095   75172 ..   75182 +  -5.4  -2.68758   TATAAACAAGGCACG                 CAAG AGG CTTG                 GTTAATTCCTTCTAT  48 254
STM474_p1096   75787 ..   75799 +  -3.4  -3.62224   AGATACGCACTGGAG                TCAC AGCAA GTGA                TTATTGAAAAACTAT  53 89
       repA2   77418 ..   77456 +  -4.7  -3.46602   CTCCATATATCGTAA  TAT-GCTCACTACAGCTT ATAT AAGCTGTGGTGAGTGACG   TTGTCATGTCAGGGC  55 237
        pefB   79635 ..   79646 +  -4.4  -4.56367   TTTTTACGATGTCAC                GTCA TAGC TGAC                 TTTATTTCTGCCCTG  68 180
        pefA   80313 ..   80336 + -13.8  -3.97659   ATTTTATTTAAATGA          CGCGGCGCAC CGCC GTGCGCCGCA           TTTAATTACCTTGTT 100 65
        pefC NONE
        pefD NONE
STM474_p1103   84294 ..   84319 +  -2.5  -2.93703   CGGAATCAACTGAAT         GCCGAGTGGC TAAGACT GACAC-CGGC         TCTGTAAATGATTAT  42 153
STM474_p1104   85379 ..   85392 +  -2.3  -2.59431   CATGCGTGGTGTACT               GAGGC CAAA GCATC                TGCGTTATACCCGGC  39 110
        pefI NONE
STM474_p1106   86290 ..   86308 +  -5.4  -4.67607   TATCACTGAAAGTTA             TTTTATGA TGT TCATGAAA             TTTATTTATTACGCC  75 42
        srgA   87228 ..   87242 +  -3.5    -3.615   GTGCACTGATTCTCC               TGCTG CTGAC CAGCG               TCTTTATCTCCGGCT  50 82
        srgB   88222 ..   88246 +  -4.3  -3.54475   TGAAGCGGCGTTACG          GGTGTGC AGGAGCAGAAA GCACACC          TTCTGTCATAACACA  52 44
         rck   88834 ..   88844 +  -4.6  -3.40403   GCGTTAACGTTGGTG                 TCGG TTA CCGG                 TTCTGATAACGGAGA  52 9
        srgC   90316 ..   90347 +  -8.6  -3.13164   GTCAACTGCTGAATC      GCGGGGTCCCGCGCC TTT GGCGTGGG-TTCCGA      TTCAGTGGTTGACAA  64 466
STM474_p1117   93226 ..   93267 -  -6.6  -3.90318   TTATTACTTCAGAAA CGCCGG-AATCGGGGGAAA CTCGT TTTTCCCGGATTGCCGGGG CTGGACAACGACGCG  66 222
STM474_p1116   92537 ..   92549 -  -4.9  -2.96183   GCAGAGAATACTACA                GATTT CTA AAATC                AGCGACTTACTTTAT  49 163
        repC   91997 ..   92013 -    -3  -4.46212   TTTCTGAGCATAAAA              CTATAC TCCCT GCATAG              CCTGATTGGTGGCTA  62 254
         tap NONE
        repA NONE
STM474_p1112   90480 ..   90518 - -13.6   -4.3129   CATTCATTATTAAAA   GCGACTCCATTCCGGCCC TTT GGGCCGGGGCGGCGGCGC   TTTTCAGTGGTGGGA 100 333
STM474_p1111   89876 ..   89886 -  -3.2  -4.19746   TTTATTGCAAAATAA                 CAGT AAA ACCG                 TCGTATAACATCCGG  60 111
STM474_p1097   75906 ..   75922 -  -2.3  -4.34402   CCTGTTAGATCAAAA              GAAGA TCCCGAC TCTTC              TAAAGGCCGCGTCAG  61 268
        ccdA NONE
        ccdB   73224 ..   73236 -  -3.3  -2.65815   CTGACACGCATATCA                GATCC CCC GGAAC                ATCAGGTTAATGGCG  42 10
STM474_p1092 NONE
STM474_p1091 NONE
        rsdB NONE
STM474_p1089   70919 ..   70929 -  -8.2  -3.62354   GCCGGAAATGAAACA                 GCCC GAA GGGC                 ATCGGGGCGCCGCAG  71 130
STM474_p1088 NONE
STM474_p1087 NONE
STM474_p1086   69635 ..   69658 -  -4.4  -2.61264   GCCTGCATCCACAAT          GTGGCCCAGG TACA CCCCGTCCAC           GCCGGGGAGTACAGG  44 50
STM474_p1085 NONE
STM474_p1084   68339 ..   68357 -  -2.3  -3.97308   CGTAAAGACATTAAA             CCGCTTC TGGCT GTAGCGA             AAAAATTCCGTAAAT  54 259
STM474_p1081   67671 ..   67681 -  -8.2  -4.23007   GATATAAGGCGAAAA                 GCCC GAA GGGC                 TTTAGGGCAGGCTAC  77 37
STM474_p1073   62303 ..   62313 -  -2.4  -3.83998   GCACTGCACATCAAA                 GGCG TAG CGCT                 CTGTACCTCCTTGTA  52 82
STM474_p1071 NONE
STM474_p1070   59401 ..   59415 -  -3.4  -3.72576   CTGCTGGCGATGAAA               CTGCGA ACA CCGCTG               CAGGTCCAGTTGCAC  53 484
STM474_p1065   54417 ..   54438 -  -2.1  -3.21925   ATACGTTAGCATTAA           CCAGAGACA GACA TGCCGCAGG            ATGAATCAGTCGTCA  43 31
        tlpA NONE
        yacC   52514 ..   52530 -  -7.9  -3.28712   CCTGTGCTGTCATAA              CGGCGTC AGT GACGGCG              GAATGAGCCACCCCG  64 48
STM474_p1060   52002 ..   52016 -  -4.3  -4.91712   CGCAAGTCAGAAAAA               TGATG TAATT CATCA               GGCATAATCAGCACA  74 43
STM474_p1059   51107 ..   51117 -  -6.8  -3.38522   CAGGCAGGCGAAACA                 TCGG ACG CCGA                 AGCCTTTGTACGCGA  59 319
        parA NONE
        parB   47830 ..   47841 -  -5.8  -3.64371   AAGTTAGATGTGAAA                TCGC CGTG GCGA                 AATTATTGACTCAAA  61 28
STM474_p1052 NONE
STM474_p1051   44587 ..   44613 -  -5.6  -4.93296   GCAGGAGCAGAAAAA         TCGCCCGTCCCG TGC CCGGCCGGACGC         GGGATACTGACCACA  78 148
STM474_p1050 NONE
STM474_p1049 NONE
STM474_p1048 NONE
STM474_p1047   42075 ..   42096 - -10.9  -5.30575   GAAAAACTGAAAAAA           GAGAAGGAG ACCT CCCCTTCTC            TTTTCTTTCTCGTTA 100 77
STM474_p1046   41182 ..   41217 -  -9.6  -2.98014   AATCAATGAATGACA    GTTACAG-CGGGGCGGC ATC GCCGCCCCGTCGGTTAA    TCAGTCGAGCGCGGC  69 26
STM474_p1045   40546 ..   40579 - -14.5  -4.13014   GGCAGATGGGGAAAA     GGGCAGGGAGCGGCGC GAA GCGCGGC-CCCTGTCC     TTCCCCCCGCAGGCG 100 163
STM474_p1044   39644 ..   39685 -  -8.9  -3.28712   CTGTCCGGGGCAGAA CGCAAAAGTTTTTGCCG GCCTTTTA CGGCAAAAAGTTTTGTG  GGTTGTTCATTTCAC  69 498
        ssbB   38902 ..   38918 - -13.7  -3.28712   TGTTCTCCTGGATAA              GCCCCGT CAG ACGGGGC              ATCAGTGAAAATTTA  91 46
STM474_p1042   38599 ..   38637 -  -2.4  -3.29471   CCTTCATGATATTAA  TAATTGTCTGCCGGACG TGTTCC CGTCCGGCAC-CTCTTA   CGGCTTACTGCGTTT  45 30
STM474_p1041 NONE
        psiB NONE
        psiA   34902 ..   34921 -  -5.6  -5.08088   AATTCTGAAGAAAAA            GCAGTGAC CGGA GACACCGC             CATTTCCGTTAACAC  82 472
        traM   32445 ..   32461 -  -2.9  -4.08485   TTTATTTAAACTAAA              TCAGGAT TTA ATCCCGC              TATTATTCTTCATTT  56 28
        traJ NONE
        traY   31264 ..   31277 -  -2.5  -2.96531   CTATGAATATGAAAG               TTAAA TCTC TTTAA                ATGTGGACTCTGTTT  42 12
        traA NONE
        traL   30542 ..   30553 -  -2.2  -3.11955   ATAATGATTACTTAA                TCCA CTGC CGGA                 AACACGAATCGGGAA  43 6
        traE NONE
        traK NONE
        traB NONE
        traP NONE
        trbD NONE
        traV   26436 ..   26454 -  -8.8   -4.2074   TTTTGAATACAGAAA             GCCGGC CGGCATT GCCGGC             TGATATCTGACTGAC  77 48
        traR NONE
STM474_p1025   25630 ..   25642 -  -4.7  -4.49981   TACACCAGGAGAAAA                CCGGC CAC GCCGT                AACGCTGCAGATAAA  71 44
STM474_p1024   25274 ..   25285 -    -3  -2.51547   TCTTCACACGAACAC                CTTA ACCT TAAG                 AAAAACAGAATGTTG  40 21
        traC NONE
        trbI NONE
        traW NONE
        traU NONE
STM474_p1019 NONE
        trbC NONE
STM474_p1017 NONE
        traN NONE
        trbE NONE
        traF   16301 ..   16311 -  -2.6   -3.1506   AAACGCCGCCATGAA                 TAAA CTA TTTA                 ACAGTGGGGGCTATT  45 136
        traQ NONE
        trbB NONE
        traH NONE
        traG NONE
        traS NONE
        traT    9884 ..    9898 -  -7.8  -3.18264   GGCGTCAGTCAGGAA               GCCAGT CAG ACCGGC               CTCCTGAAGATGATT  62 39
        traD NONE
        trbH NONE
        traI NONE
        traX     653 ..     663 -  -4.6  -3.32343   GTCACATCGCCAGAA                 CGCC CAG GGCA                 GCCAGATGGCAGGTG  52 1
        finO NONE
