Shewana3_0023	PWY-5136	fatty acid β-oxidation II (peroxisome)
Shewana3_0023	PWY-6435	4-hydroxybenzoate biosynthesis V
Shewana3_0023	PWY-6863	pyruvate fermentation to hexanol
Shewana3_0023	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Shewana3_0023	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Shewana3_0023	PWY-6948	sitosterol degradation to androstenedione
Shewana3_0023	PWY-7094	fatty acid salvage
Shewana3_0023	PWY-7288	fatty acid β-oxidation (peroxisome, yeast)
Shewana3_0023	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
Shewana3_0023	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
Shewana3_0023	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
Shewana3_0023	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
Shewana3_0023	PWY-735	jasmonic acid biosynthesis
Shewana3_0024	PWY-1361	benzoyl-CoA degradation I (aerobic)
Shewana3_0024	PWY-5109	2-methylbutanoate biosynthesis
Shewana3_0024	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Shewana3_0024	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
Shewana3_0024	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Shewana3_0024	PWY-5177	glutaryl-CoA degradation
Shewana3_0024	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Shewana3_0024	PWY-6435	4-hydroxybenzoate biosynthesis V
Shewana3_0024	PWY-6583	pyruvate fermentation to butanol I
Shewana3_0024	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
Shewana3_0024	PWY-6863	pyruvate fermentation to hexanol
Shewana3_0024	PWY-6883	pyruvate fermentation to butanol II
Shewana3_0024	PWY-6944	androstenedione degradation
Shewana3_0024	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Shewana3_0024	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Shewana3_0024	PWY-7007	methyl ketone biosynthesis
Shewana3_0024	PWY-7046	4-coumarate degradation (anaerobic)
Shewana3_0024	PWY-7094	fatty acid salvage
Shewana3_0024	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Shewana3_0024	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
Shewana3_0024	PWY-735	jasmonic acid biosynthesis
Shewana3_0024	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Shewana3_0041	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Shewana3_0041	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Shewana3_0043	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Shewana3_0051	PWY-1042	glycolysis IV (plant cytosol)
Shewana3_0051	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Shewana3_0051	PWY-5484	glycolysis II (from fructose 6-phosphate)
Shewana3_0051	PWY-5723	Rubisco shunt
Shewana3_0051	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Shewana3_0051	PWY-6886	1-butanol autotrophic biosynthesis
Shewana3_0051	PWY-6901	superpathway of glucose and xylose degradation
Shewana3_0051	PWY-7003	glycerol degradation to butanol
Shewana3_0051	PWY-7124	ethylene biosynthesis V (engineered)
Shewana3_0051	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Shewana3_0054	PWY-5667	CDP-diacylglycerol biosynthesis I
Shewana3_0054	PWY-5981	CDP-diacylglycerol biosynthesis III
Shewana3_0066	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Shewana3_0088	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Shewana3_0098	PWY-5028	L-histidine degradation II
Shewana3_0098	PWY-5030	L-histidine degradation III
Shewana3_0100	PWY-5028	L-histidine degradation II
Shewana3_0100	PWY-5030	L-histidine degradation III
Shewana3_0101	PWY-5028	L-histidine degradation II
Shewana3_0101	PWY-5030	L-histidine degradation III
Shewana3_0125	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
Shewana3_0125	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Shewana3_0125	PWY-6148	tetrahydromethanopterin biosynthesis
Shewana3_0130	PWY-6823	molybdenum cofactor biosynthesis
Shewana3_0131	PWY-6823	molybdenum cofactor biosynthesis
Shewana3_0134	PWY-6167	flavin biosynthesis II (archaea)
Shewana3_0134	PWY-6168	flavin biosynthesis III (fungi)
Shewana3_0147	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Shewana3_0147	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Shewana3_0176	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Shewana3_0180	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Shewana3_0180	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Shewana3_0182	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Shewana3_0182	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Shewana3_0183	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Shewana3_0183	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Shewana3_0184	PWY-3961	phosphopantothenate biosynthesis II
Shewana3_0274	PWY-6823	molybdenum cofactor biosynthesis
Shewana3_0277	PWY-6823	molybdenum cofactor biosynthesis
Shewana3_0300	PWY-381	nitrate reduction II (assimilatory)
Shewana3_0300	PWY-5675	nitrate reduction V (assimilatory)
Shewana3_0300	PWY-6549	L-glutamine biosynthesis III
Shewana3_0300	PWY-6963	ammonia assimilation cycle I
Shewana3_0300	PWY-6964	ammonia assimilation cycle II
Shewana3_0327	PWY-5367	petroselinate biosynthesis
Shewana3_0327	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Shewana3_0327	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Shewana3_0327	PWY-5989	stearate biosynthesis II (bacteria and plants)
Shewana3_0327	PWY-5994	palmitate biosynthesis I (animals and fungi)
Shewana3_0327	PWY-6113	superpathway of mycolate biosynthesis
Shewana3_0327	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Shewana3_0327	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Shewana3_0327	PWY-6951	Shewana3_0327
Shewana3_0327	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Shewana3_0327	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Shewana3_0327	PWYG-321	mycolate biosynthesis
Shewana3_0337	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Shewana3_0337	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Shewana3_0337	PWY-5989	stearate biosynthesis II (bacteria and plants)
Shewana3_0337	PWY-5994	palmitate biosynthesis I (animals and fungi)
Shewana3_0337	PWY-6113	superpathway of mycolate biosynthesis
Shewana3_0337	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Shewana3_0337	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Shewana3_0337	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Shewana3_0337	PWYG-321	mycolate biosynthesis
Shewana3_0355	PWY-5101	L-isoleucine biosynthesis II
Shewana3_0355	PWY-5103	L-isoleucine biosynthesis III
Shewana3_0355	PWY-5104	L-isoleucine biosynthesis IV
Shewana3_0355	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Shewana3_0356	PWY-5101	L-isoleucine biosynthesis II
Shewana3_0356	PWY-5103	L-isoleucine biosynthesis III
Shewana3_0356	PWY-5104	L-isoleucine biosynthesis IV
Shewana3_0356	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Shewana3_0356	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Shewana3_0356	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Shewana3_0356	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Shewana3_0358	PWY-5101	L-isoleucine biosynthesis II
Shewana3_0358	PWY-5103	L-isoleucine biosynthesis III
Shewana3_0358	PWY-5104	L-isoleucine biosynthesis IV
Shewana3_0358	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Shewana3_0360	PWY-6832	2-aminoethylphosphonate degradation II
Shewana3_0385	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Shewana3_0385	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Shewana3_0386	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Shewana3_0386	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Shewana3_0390	PWY-2941	L-lysine biosynthesis II
Shewana3_0390	PWY-2942	L-lysine biosynthesis III
Shewana3_0390	PWY-5097	L-lysine biosynthesis VI
Shewana3_0391	PWY-2941	L-lysine biosynthesis II
Shewana3_0391	PWY-5097	L-lysine biosynthesis VI
Shewana3_0403	PWY-3781	aerobic respiration I (cytochrome c)
Shewana3_0403	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Shewana3_0403	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Shewana3_0403	PWY-5690	TCA cycle II (plants and fungi)
Shewana3_0403	PWY-6728	methylaspartate cycle
Shewana3_0403	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Shewana3_0403	PWY-7254	TCA cycle VII (acetate-producers)
Shewana3_0403	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Shewana3_0404	PWY-3781	aerobic respiration I (cytochrome c)
Shewana3_0404	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Shewana3_0404	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Shewana3_0404	PWY-5690	TCA cycle II (plants and fungi)
Shewana3_0404	PWY-6728	methylaspartate cycle
Shewana3_0404	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Shewana3_0404	PWY-7254	TCA cycle VII (acetate-producers)
Shewana3_0404	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Shewana3_0408	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Shewana3_0413	PWY-6502	oxidized GTP and dGTP detoxification
Shewana3_0416	PWY-7193	pyrimidine ribonucleosides salvage I
Shewana3_0422	PWY-5316	nicotine biosynthesis
Shewana3_0422	PWY-5381	pyridine nucleotide cycling (plants)
Shewana3_0422	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Shewana3_0422	PWY-7342	superpathway of nicotine biosynthesis
Shewana3_0426	PWY-6891	thiazole biosynthesis II (Bacillus)
Shewana3_0426	PWY-6892	thiazole biosynthesis I (E. coli)
Shewana3_0426	PWY-7560	methylerythritol phosphate pathway II
Shewana3_0428	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Shewana3_0428	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Shewana3_0433	PWY-5747	2-methylcitrate cycle II
Shewana3_0435	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Shewana3_0435	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Shewana3_0440	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Shewana3_0440	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Shewana3_0440	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Shewana3_0441	PWY-6123	inosine-5'-phosphate biosynthesis I
Shewana3_0441	PWY-6124	inosine-5'-phosphate biosynthesis II
Shewana3_0441	PWY-7234	inosine-5'-phosphate biosynthesis III
Shewana3_0474	PWY-723	alkylnitronates degradation
Shewana3_0489	PWY-5674	nitrate reduction IV (dissimilatory)
Shewana3_0511	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Shewana3_0511	PWY-6416	quinate degradation II
Shewana3_0511	PWY-6707	gallate biosynthesis
Shewana3_0534	PWY-1042	glycolysis IV (plant cytosol)
Shewana3_0534	PWY-5484	glycolysis II (from fructose 6-phosphate)
Shewana3_0534	PWY-6901	superpathway of glucose and xylose degradation
Shewana3_0534	PWY-7003	glycerol degradation to butanol
Shewana3_0560	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Shewana3_0560	PWY-2161	folate polyglutamylation
Shewana3_0560	PWY-2201	folate transformations I
Shewana3_0560	PWY-3841	folate transformations II
Shewana3_0568	PWY-5667	CDP-diacylglycerol biosynthesis I
Shewana3_0568	PWY-5981	CDP-diacylglycerol biosynthesis III
Shewana3_0568	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
Shewana3_0568	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
Shewana3_0588	PWY-5669	phosphatidylethanolamine biosynthesis I
Shewana3_0592	PWY-6938	NADH repair
Shewana3_0596	PWY-2781	<i>cis</i>-zeatin biosynthesis
Shewana3_0601	PWY-3781	aerobic respiration I (cytochrome c)
Shewana3_0601	PWY-6692	Fe(II) oxidation
Shewana3_0601	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
Shewana3_0601	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Shewana3_0606	PWY-5958	acridone alkaloid biosynthesis
Shewana3_0606	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Shewana3_0606	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Shewana3_0623	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Shewana3_0623	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Shewana3_0623	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Shewana3_0623	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Shewana3_0648	PWY-5484	glycolysis II (from fructose 6-phosphate)
Shewana3_0652	PWY-2941	L-lysine biosynthesis II
Shewana3_0652	PWY-2942	L-lysine biosynthesis III
Shewana3_0652	PWY-5097	L-lysine biosynthesis VI
Shewana3_0652	PWY-6559	spermidine biosynthesis II
Shewana3_0652	PWY-6562	norspermidine biosynthesis
Shewana3_0652	PWY-7153	grixazone biosynthesis
Shewana3_0658	PWY-5674	nitrate reduction IV (dissimilatory)
Shewana3_0676	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Shewana3_0676	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Shewana3_0684	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Shewana3_0684	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Shewana3_0695	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Shewana3_0706	PWY-5198	factor 420 biosynthesis
Shewana3_0708	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Shewana3_0710	PWY-6759	hydrogen production III
Shewana3_0710	PWY-6785	hydrogen production VIII
Shewana3_0714	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Shewana3_0766	PWY-7560	methylerythritol phosphate pathway II
Shewana3_0768	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Shewana3_0775	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Shewana3_0775	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Shewana3_0780	PWY-6654	phosphopantothenate biosynthesis III
Shewana3_0793	PWY-6599	guanine and guanosine salvage II
Shewana3_0793	PWY-6609	adenine and adenosine salvage III
Shewana3_0793	PWY-6610	adenine and adenosine salvage IV
Shewana3_0793	PWY-6620	guanine and guanosine salvage
Shewana3_0806	PWY-7533	gliotoxin biosynthesis
Shewana3_0808	PWY-6823	molybdenum cofactor biosynthesis
Shewana3_0808	PWY-6891	thiazole biosynthesis II (Bacillus)
Shewana3_0808	PWY-6892	thiazole biosynthesis I (E. coli)
Shewana3_0808	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Shewana3_0819	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Shewana3_0819	PWY-6853	ethylene biosynthesis II (microbes)
Shewana3_0819	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Shewana3_0846	PWY-3781	aerobic respiration I (cytochrome c)
Shewana3_0846	PWY-4521	arsenite oxidation I (respiratory)
Shewana3_0846	PWY-6692	Fe(II) oxidation
Shewana3_0846	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Shewana3_0855	PWY-6683	sulfate reduction III (assimilatory)
Shewana3_0856	PWY-6683	sulfate reduction III (assimilatory)
Shewana3_0861	PWY-6803	phosphatidylcholine acyl editing
Shewana3_0861	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
Shewana3_0861	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
Shewana3_0861	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
Shewana3_0862	PWY-5194	siroheme biosynthesis
Shewana3_0862	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Shewana3_0863	PWY-5278	sulfite oxidation III
Shewana3_0863	PWY-5340	sulfate activation for sulfonation
Shewana3_0863	PWY-6683	sulfate reduction III (assimilatory)
Shewana3_0863	PWY-6932	selenate reduction
Shewana3_0864	PWY-5278	sulfite oxidation III
Shewana3_0864	PWY-5340	sulfate activation for sulfonation
Shewana3_0864	PWY-6683	sulfate reduction III (assimilatory)
Shewana3_0864	PWY-6932	selenate reduction
Shewana3_0866	PWY-5340	sulfate activation for sulfonation
Shewana3_0897	PWY-4061	glutathione-mediated detoxification I
Shewana3_0897	PWY-6842	glutathione-mediated detoxification II
Shewana3_0897	PWY-7112	4-hydroxy-2-nonenal detoxification
Shewana3_0908	PWY-5506	methanol oxidation to formaldehyde IV
Shewana3_0930	PWY-5344	L-homocysteine biosynthesis
Shewana3_0930	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Shewana3_0936	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Shewana3_0936	PWY-6153	autoinducer AI-2 biosynthesis I
Shewana3_0936	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
Shewana3_0951	PWY-5988	wound-induced proteolysis I
Shewana3_0951	PWY-6018	seed germination protein turnover
Shewana3_0966	PWY-2941	L-lysine biosynthesis II
Shewana3_0966	PWY-2942	L-lysine biosynthesis III
Shewana3_0966	PWY-5097	L-lysine biosynthesis VI
Shewana3_0967	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Shewana3_0967	PWY-5686	UMP biosynthesis
Shewana3_0967	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Shewana3_0968	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Shewana3_0968	PWY-5686	UMP biosynthesis
Shewana3_0968	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Shewana3_0978	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Shewana3_0978	PWY-5723	Rubisco shunt
Shewana3_0988	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Shewana3_0988	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Shewana3_0988	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Shewana3_0989	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Shewana3_0989	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Shewana3_0991	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Shewana3_0991	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Shewana3_0998	PWY-5381	pyridine nucleotide cycling (plants)
Shewana3_0998	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Shewana3_1024	PWY-6614	tetrahydrofolate biosynthesis
Shewana3_1025	PWY-6749	CMP-legionaminate biosynthesis I
Shewana3_1026	PWY-1042	glycolysis IV (plant cytosol)
Shewana3_1026	PWY-5484	glycolysis II (from fructose 6-phosphate)
Shewana3_1026	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Shewana3_1026	PWY-7003	glycerol degradation to butanol
Shewana3_1041	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Shewana3_1042	PWY-7181	pyrimidine deoxyribonucleosides degradation
Shewana3_1043	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Shewana3_1044	PWY-4202	arsenate detoxification I (glutaredoxin)
Shewana3_1044	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Shewana3_1044	PWY-6608	guanosine nucleotides degradation III
Shewana3_1044	PWY-6609	adenine and adenosine salvage III
Shewana3_1044	PWY-6611	adenine and adenosine salvage V
Shewana3_1044	PWY-6620	guanine and guanosine salvage
Shewana3_1044	PWY-6627	salinosporamide A biosynthesis
Shewana3_1044	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Shewana3_1044	PWY-7179	purine deoxyribonucleosides degradation I
Shewana3_1044	PWY-7179-1	purine deoxyribonucleosides degradation
Shewana3_1072	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Shewana3_1094	PWY-1622	formaldehyde assimilation I (serine pathway)
Shewana3_1094	PWY-181	photorespiration
Shewana3_1094	PWY-2161	folate polyglutamylation
Shewana3_1094	PWY-2201	folate transformations I
Shewana3_1094	PWY-3661	glycine betaine degradation I
Shewana3_1094	PWY-3661-1	glycine betaine degradation II (mammalian)
Shewana3_1094	PWY-3841	folate transformations II
Shewana3_1094	PWY-5497	purine nucleobases degradation II (anaerobic)
Shewana3_1097	PWY-6167	flavin biosynthesis II (archaea)
Shewana3_1097	PWY-6168	flavin biosynthesis III (fungi)
Shewana3_1097	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Shewana3_1098	PWY-6167	flavin biosynthesis II (archaea)
Shewana3_1098	PWY-6168	flavin biosynthesis III (fungi)
Shewana3_1098	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Shewana3_1099	PWY-6167	flavin biosynthesis II (archaea)
Shewana3_1099	PWY-6168	flavin biosynthesis III (fungi)
Shewana3_1101	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Shewana3_1101	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Shewana3_1101	PWY-6896	thiamin salvage I
Shewana3_1101	PWY-6897	thiamin salvage II
Shewana3_1102	PWY-5269	cardiolipin biosynthesis II
Shewana3_1102	PWY-5668	cardiolipin biosynthesis I
Shewana3_1115	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Shewana3_1115	PWY-7177	UTP and CTP dephosphorylation II
Shewana3_1115	PWY-7185	UTP and CTP dephosphorylation I
Shewana3_1116	PWY-1042	glycolysis IV (plant cytosol)
Shewana3_1116	PWY-1622	formaldehyde assimilation I (serine pathway)
Shewana3_1116	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Shewana3_1116	PWY-5484	glycolysis II (from fructose 6-phosphate)
Shewana3_1116	PWY-5723	Rubisco shunt
Shewana3_1116	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Shewana3_1116	PWY-6886	1-butanol autotrophic biosynthesis
Shewana3_1116	PWY-6901	superpathway of glucose and xylose degradation
Shewana3_1116	PWY-7003	glycerol degradation to butanol
Shewana3_1116	PWY-7124	ethylene biosynthesis V (engineered)
Shewana3_1116	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Shewana3_1118	PWY-7560	methylerythritol phosphate pathway II
Shewana3_1119	PWY-7560	methylerythritol phosphate pathway II
Shewana3_1121	PWY-5381	pyridine nucleotide cycling (plants)
Shewana3_1121	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Shewana3_1121	PWY-6596	adenosine nucleotides degradation I
Shewana3_1121	PWY-6606	guanosine nucleotides degradation II
Shewana3_1121	PWY-6607	guanosine nucleotides degradation I
Shewana3_1121	PWY-6608	guanosine nucleotides degradation III
Shewana3_1121	PWY-7185	UTP and CTP dephosphorylation I
Shewana3_1129	PWY-2941	L-lysine biosynthesis II
Shewana3_1129	PWY-2942	L-lysine biosynthesis III
Shewana3_1129	PWY-5097	L-lysine biosynthesis VI
Shewana3_1129	PWY-6559	spermidine biosynthesis II
Shewana3_1129	PWY-6562	norspermidine biosynthesis
Shewana3_1129	PWY-7153	grixazone biosynthesis
Shewana3_1139	PWY-2941	L-lysine biosynthesis II
Shewana3_1139	PWY-2942	L-lysine biosynthesis III
Shewana3_1139	PWY-5097	L-lysine biosynthesis VI
Shewana3_1139	PWY-6559	spermidine biosynthesis II
Shewana3_1139	PWY-6562	norspermidine biosynthesis
Shewana3_1139	PWY-7153	grixazone biosynthesis
Shewana3_1140	PWY-702	L-methionine biosynthesis II
Shewana3_1189	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Shewana3_1193	PWY-3341	L-proline biosynthesis III
Shewana3_1193	PWY-4981	L-proline biosynthesis II (from arginine)
Shewana3_1193	PWY-6344	L-ornithine degradation II (Stickland reaction)
Shewana3_1194	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Shewana3_1229	PWY-7560	methylerythritol phosphate pathway II
Shewana3_1235	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Shewana3_1235	PWY-6596	adenosine nucleotides degradation I
Shewana3_1235	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Shewana3_1236	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Shewana3_1240	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Shewana3_1240	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Shewana3_1240	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Shewana3_1243	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
Shewana3_1302	PWY-6143	CMP-pseudaminate biosynthesis
Shewana3_1302	PWY-7330	UDP-<i>N</i>-acetyl-&beta;-L-fucosamine biosynthesis
Shewana3_1302	PWY-7331	UDP-<i>N</i>-acetyl-&beta;-L-quinovosamine biosynthesis
Shewana3_1302	PWY-7332	superpathway of UDP-<I>N</i>-acetylglucosamine-derived O-antigen building blocks biosynthesis
Shewana3_1304	PWY-6143	CMP-pseudaminate biosynthesis
Shewana3_1309	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Shewana3_1309	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Shewana3_1309	PWY-6143	CMP-pseudaminate biosynthesis
Shewana3_1345	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Shewana3_1379	PWY-3221	dTDP-L-rhamnose biosynthesis II
Shewana3_1379	PWY-6808	dTDP-D-forosamine biosynthesis
Shewana3_1379	PWY-6942	dTDP-D-desosamine biosynthesis
Shewana3_1379	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Shewana3_1379	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Shewana3_1379	PWY-6974	dTDP-L-olivose biosynthesis
Shewana3_1379	PWY-6976	dTDP-L-mycarose biosynthesis
Shewana3_1379	PWY-7104	dTDP-L-megosamine biosynthesis
Shewana3_1379	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Shewana3_1379	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Shewana3_1379	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Shewana3_1379	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Shewana3_1379	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Shewana3_1379	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Shewana3_1379	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Shewana3_1379	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Shewana3_1380	PWY-3221	dTDP-L-rhamnose biosynthesis II
Shewana3_1380	PWY-6808	dTDP-D-forosamine biosynthesis
Shewana3_1380	PWY-6942	dTDP-D-desosamine biosynthesis
Shewana3_1380	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Shewana3_1380	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Shewana3_1380	PWY-6974	dTDP-L-olivose biosynthesis
Shewana3_1380	PWY-6976	dTDP-L-mycarose biosynthesis
Shewana3_1380	PWY-7104	dTDP-L-megosamine biosynthesis
Shewana3_1380	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Shewana3_1380	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Shewana3_1380	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Shewana3_1380	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Shewana3_1380	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Shewana3_1380	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Shewana3_1380	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Shewana3_1380	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Shewana3_1387	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Shewana3_1391	PWY-3221	dTDP-L-rhamnose biosynthesis II
Shewana3_1391	PWY-6808	dTDP-D-forosamine biosynthesis
Shewana3_1391	PWY-6942	dTDP-D-desosamine biosynthesis
Shewana3_1391	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Shewana3_1391	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Shewana3_1391	PWY-6974	dTDP-L-olivose biosynthesis
Shewana3_1391	PWY-6976	dTDP-L-mycarose biosynthesis
Shewana3_1391	PWY-7104	dTDP-L-megosamine biosynthesis
Shewana3_1391	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Shewana3_1391	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Shewana3_1391	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Shewana3_1391	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Shewana3_1391	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Shewana3_1391	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Shewana3_1391	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Shewana3_1391	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Shewana3_1410	PWY-7199	pyrimidine deoxyribonucleosides salvage
Shewana3_1418	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Shewana3_1432	PWY-6012	acyl carrier protein metabolism I
Shewana3_1434	PWY-6700	queuosine biosynthesis
Shewana3_1435	PWY-6700	queuosine biosynthesis
Shewana3_1441	PWY-5194	siroheme biosynthesis
Shewana3_1441	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Shewana3_1460	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Shewana3_1460	PWY-6435	4-hydroxybenzoate biosynthesis V
Shewana3_1460	PWY-6863	pyruvate fermentation to hexanol
Shewana3_1460	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Shewana3_1460	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Shewana3_1460	PWY-6948	sitosterol degradation to androstenedione
Shewana3_1460	PWY-7094	fatty acid salvage
Shewana3_1460	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
Shewana3_1460	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
Shewana3_1460	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
Shewana3_1460	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
Shewana3_1460	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
Shewana3_1460	PWY-735	jasmonic acid biosynthesis
Shewana3_1461	PWY-1361	benzoyl-CoA degradation I (aerobic)
Shewana3_1461	PWY-5109	2-methylbutanoate biosynthesis
Shewana3_1461	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Shewana3_1461	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Shewana3_1461	PWY-5177	glutaryl-CoA degradation
Shewana3_1461	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Shewana3_1461	PWY-6435	4-hydroxybenzoate biosynthesis V
Shewana3_1461	PWY-6583	pyruvate fermentation to butanol I
Shewana3_1461	PWY-6863	pyruvate fermentation to hexanol
Shewana3_1461	PWY-6883	pyruvate fermentation to butanol II
Shewana3_1461	PWY-6944	androstenedione degradation
Shewana3_1461	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Shewana3_1461	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Shewana3_1461	PWY-7007	methyl ketone biosynthesis
Shewana3_1461	PWY-7046	4-coumarate degradation (anaerobic)
Shewana3_1461	PWY-7094	fatty acid salvage
Shewana3_1461	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Shewana3_1461	PWY-735	jasmonic acid biosynthesis
Shewana3_1461	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Shewana3_1469	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Shewana3_1471	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Shewana3_1471	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Shewana3_1471	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Shewana3_1477	PWY-2941	L-lysine biosynthesis II
Shewana3_1477	PWY-2942	L-lysine biosynthesis III
Shewana3_1477	PWY-5097	L-lysine biosynthesis VI
Shewana3_1477	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Shewana3_1477	PWY-6559	spermidine biosynthesis II
Shewana3_1477	PWY-6562	norspermidine biosynthesis
Shewana3_1477	PWY-7153	grixazone biosynthesis
Shewana3_1477	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Shewana3_1480	PWY-2161	folate polyglutamylation
Shewana3_1483	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Shewana3_1483	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Shewana3_1483	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Shewana3_1483	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Shewana3_1519	PWY-5958	acridone alkaloid biosynthesis
Shewana3_1519	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Shewana3_1519	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Shewana3_1520	PWY-5958	acridone alkaloid biosynthesis
Shewana3_1520	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Shewana3_1520	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Shewana3_1543	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Shewana3_1543	PWY-6148	tetrahydromethanopterin biosynthesis
Shewana3_1543	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Shewana3_1543	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Shewana3_1551	PWY-1281	sulfoacetaldehyde degradation I
Shewana3_1551	PWY-5482	pyruvate fermentation to acetate II
Shewana3_1551	PWY-5485	pyruvate fermentation to acetate IV
Shewana3_1551	PWY-5497	purine nucleobases degradation II (anaerobic)
Shewana3_1551	PWY-6637	sulfolactate degradation II
Shewana3_1552	PWY-5482	pyruvate fermentation to acetate II
Shewana3_1552	PWY-5485	pyruvate fermentation to acetate IV
Shewana3_1552	PWY-5497	purine nucleobases degradation II (anaerobic)
Shewana3_1555	PWY-5480	pyruvate fermentation to ethanol I
Shewana3_1555	PWY-5485	pyruvate fermentation to acetate IV
Shewana3_1555	PWY-5493	reductive monocarboxylic acid cycle
Shewana3_1561	PWY-6936	seleno-amino acid biosynthesis
Shewana3_1563	PWY-4381	fatty acid biosynthesis initiation I
Shewana3_1565	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Shewana3_1581	PWY-4381	fatty acid biosynthesis initiation I
Shewana3_1606	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Shewana3_1606	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Shewana3_1606	PWY-5989	stearate biosynthesis II (bacteria and plants)
Shewana3_1606	PWY-5994	palmitate biosynthesis I (animals and fungi)
Shewana3_1606	PWY-6113	superpathway of mycolate biosynthesis
Shewana3_1606	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Shewana3_1606	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Shewana3_1606	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Shewana3_1606	PWYG-321	mycolate biosynthesis
Shewana3_1610	PWY-5269	cardiolipin biosynthesis II
Shewana3_1610	PWY-5668	cardiolipin biosynthesis I
Shewana3_1624	PWY-40	putrescine biosynthesis I
Shewana3_1624	PWY-43	putrescine biosynthesis II
Shewana3_1624	PWY-6305	putrescine biosynthesis IV
Shewana3_1624	PWY-6834	spermidine biosynthesis III
Shewana3_1625	PWY-6834	spermidine biosynthesis III
Shewana3_1626	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Shewana3_1626	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Shewana3_1639	PWY-6854	ethylene biosynthesis III (microbes)
Shewana3_1648	PWY-4202	arsenate detoxification I (glutaredoxin)
Shewana3_1648	PWY-4621	arsenate detoxification II (glutaredoxin)
Shewana3_1656	PWY-2941	L-lysine biosynthesis II
Shewana3_1656	PWY-2942	L-lysine biosynthesis III
Shewana3_1656	PWY-5097	L-lysine biosynthesis VI
Shewana3_1668	PWY-5074	mevalonate degradation
Shewana3_1671	PWY-4381	fatty acid biosynthesis initiation I
Shewana3_1671	PWY-5743	3-hydroxypropanoate cycle
Shewana3_1671	PWY-5744	glyoxylate assimilation
Shewana3_1671	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Shewana3_1671	PWY-6679	jadomycin biosynthesis
Shewana3_1671	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Shewana3_1686	PWY-5839	menaquinol-7 biosynthesis
Shewana3_1686	PWY-5851	demethylmenaquinol-9 biosynthesis
Shewana3_1686	PWY-5852	demethylmenaquinol-8 biosynthesis I
Shewana3_1686	PWY-5853	demethylmenaquinol-6 biosynthesis I
Shewana3_1686	PWY-5890	menaquinol-10 biosynthesis
Shewana3_1686	PWY-5891	menaquinol-11 biosynthesis
Shewana3_1686	PWY-5892	menaquinol-12 biosynthesis
Shewana3_1686	PWY-5895	menaquinol-13 biosynthesis
Shewana3_1708	PWY-3781	aerobic respiration I (cytochrome c)
Shewana3_1708	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Shewana3_1708	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Shewana3_1708	PWY-5690	TCA cycle II (plants and fungi)
Shewana3_1708	PWY-6728	methylaspartate cycle
Shewana3_1708	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Shewana3_1708	PWY-7254	TCA cycle VII (acetate-producers)
Shewana3_1708	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Shewana3_1709	PWY-3781	aerobic respiration I (cytochrome c)
Shewana3_1709	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Shewana3_1709	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Shewana3_1709	PWY-5690	TCA cycle II (plants and fungi)
Shewana3_1709	PWY-6728	methylaspartate cycle
Shewana3_1709	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Shewana3_1709	PWY-7254	TCA cycle VII (acetate-producers)
Shewana3_1709	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Shewana3_1710	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Shewana3_1711	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Shewana3_1712	PWY-5392	reductive TCA cycle II
Shewana3_1712	PWY-5537	pyruvate fermentation to acetate V
Shewana3_1712	PWY-5538	pyruvate fermentation to acetate VI
Shewana3_1712	PWY-5690	TCA cycle II (plants and fungi)
Shewana3_1712	PWY-5913	TCA cycle VI (obligate autotrophs)
Shewana3_1712	PWY-6728	methylaspartate cycle
Shewana3_1712	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Shewana3_1712	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Shewana3_1713	PWY-5392	reductive TCA cycle II
Shewana3_1713	PWY-5537	pyruvate fermentation to acetate V
Shewana3_1713	PWY-5538	pyruvate fermentation to acetate VI
Shewana3_1713	PWY-5690	TCA cycle II (plants and fungi)
Shewana3_1713	PWY-5913	TCA cycle VI (obligate autotrophs)
Shewana3_1713	PWY-6728	methylaspartate cycle
Shewana3_1713	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Shewana3_1713	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Shewana3_1734	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Shewana3_1734	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Shewana3_1734	PWY-6164	3-dehydroquinate biosynthesis I
Shewana3_1736	PWY-5484	glycolysis II (from fructose 6-phosphate)
Shewana3_1737	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Shewana3_1737	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Shewana3_1745	PWY-6123	inosine-5'-phosphate biosynthesis I
Shewana3_1745	PWY-6124	inosine-5'-phosphate biosynthesis II
Shewana3_1745	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Shewana3_1745	PWY-7234	inosine-5'-phosphate biosynthesis III
Shewana3_1750	PWY-5913	TCA cycle VI (obligate autotrophs)
Shewana3_1750	PWY-6549	L-glutamine biosynthesis III
Shewana3_1750	PWY-6728	methylaspartate cycle
Shewana3_1750	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Shewana3_1750	PWY-7124	ethylene biosynthesis V (engineered)
Shewana3_1750	PWY-7254	TCA cycle VII (acetate-producers)
Shewana3_1750	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Shewana3_1758	PWY-5663	tetrahydrobiopterin biosynthesis I
Shewana3_1758	PWY-5664	tetrahydrobiopterin biosynthesis II
Shewana3_1758	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Shewana3_1758	PWY-6703	preQ<sub>0</sub> biosynthesis
Shewana3_1758	PWY-6983	tetrahydrobiopterin biosynthesis III
Shewana3_1758	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Shewana3_1762	PWY-7193	pyrimidine ribonucleosides salvage I
Shewana3_1763	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewana3_1764	PWY-6543	4-aminobenzoate biosynthesis
Shewana3_1764	PWY-6722	candicidin biosynthesis
Shewana3_1766	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Shewana3_1766	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Shewana3_1766	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewana3_1766	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Shewana3_1766	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Shewana3_1766	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Shewana3_1785	PWY-5022	4-aminobutanoate degradation V
Shewana3_1785	PWY-6728	methylaspartate cycle
Shewana3_1785	PWY-7126	ethylene biosynthesis IV
Shewana3_1786	PWY-5686	UMP biosynthesis
Shewana3_1788	PWY-3162	L-tryptophan degradation V (side chain pathway)
Shewana3_1788	PWY-5057	L-valine degradation II
Shewana3_1788	PWY-5076	L-leucine degradation III
Shewana3_1788	PWY-5078	L-isoleucine degradation II
Shewana3_1788	PWY-5079	L-phenylalanine degradation III
Shewana3_1788	PWY-5082	L-methionine degradation III
Shewana3_1788	PWY-5162	2-oxopentenoate degradation
Shewana3_1788	PWY-5436	L-threonine degradation IV
Shewana3_1788	PWY-5480	pyruvate fermentation to ethanol I
Shewana3_1788	PWY-5486	pyruvate fermentation to ethanol II
Shewana3_1788	PWY-5751	phenylethanol biosynthesis
Shewana3_1788	PWY-6028	acetoin degradation
Shewana3_1788	PWY-6313	serotonin degradation
Shewana3_1788	PWY-6333	acetaldehyde biosynthesis I
Shewana3_1788	PWY-6342	noradrenaline and adrenaline degradation
Shewana3_1788	PWY-6587	pyruvate fermentation to ethanol III
Shewana3_1788	PWY-6802	salidroside biosynthesis
Shewana3_1788	PWY-6871	3-methylbutanol biosynthesis
Shewana3_1788	PWY-7013	L-1,2-propanediol degradation
Shewana3_1788	PWY-7085	triethylamine degradation
Shewana3_1788	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Shewana3_1788	PWY-7118	chitin degradation to ethanol
Shewana3_1788	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Shewana3_1788	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Shewana3_1788	PWY-7557	dehydrodiconiferyl alcohol degradation
Shewana3_1837	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Shewana3_1837	PWY-3162	L-tryptophan degradation V (side chain pathway)
Shewana3_1837	PWY-5057	L-valine degradation II
Shewana3_1837	PWY-5076	L-leucine degradation III
Shewana3_1837	PWY-5078	L-isoleucine degradation II
Shewana3_1837	PWY-5079	L-phenylalanine degradation III
Shewana3_1837	PWY-5082	L-methionine degradation III
Shewana3_1837	PWY-5480	pyruvate fermentation to ethanol I
Shewana3_1837	PWY-5486	pyruvate fermentation to ethanol II
Shewana3_1837	PWY-5751	phenylethanol biosynthesis
Shewana3_1837	PWY-6028	acetoin degradation
Shewana3_1837	PWY-6313	serotonin degradation
Shewana3_1837	PWY-6333	acetaldehyde biosynthesis I
Shewana3_1837	PWY-6342	noradrenaline and adrenaline degradation
Shewana3_1837	PWY-6587	pyruvate fermentation to ethanol III
Shewana3_1837	PWY-6802	salidroside biosynthesis
Shewana3_1837	PWY-6871	3-methylbutanol biosynthesis
Shewana3_1837	PWY-7013	L-1,2-propanediol degradation
Shewana3_1837	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Shewana3_1837	PWY-7118	chitin degradation to ethanol
Shewana3_1837	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Shewana3_1837	PWY-7557	dehydrodiconiferyl alcohol degradation
Shewana3_1838	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Shewana3_1906	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Shewana3_1906	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Shewana3_1909	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Shewana3_1909	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Shewana3_1909	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Shewana3_1909	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Shewana3_1924	PWY-5767	Shewana3_1924
Shewana3_1936	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Shewana3_1937	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Shewana3_1937	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Shewana3_1937	PWY-6897	thiamin salvage II
Shewana3_1937	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Shewana3_1937	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Shewana3_1937	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Shewana3_1937	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Shewana3_1940	PWY-6891	thiazole biosynthesis II (Bacillus)
Shewana3_1940	PWY-6892	thiazole biosynthesis I (E. coli)
Shewana3_1941	PWY-6892	thiazole biosynthesis I (E. coli)
Shewana3_1941	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Shewana3_1968	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Shewana3_1968	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Shewana3_1968	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Shewana3_1968	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Shewana3_1968	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewana3_1968	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewana3_1968	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Shewana3_1968	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Shewana3_1969	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Shewana3_1969	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Shewana3_1969	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Shewana3_1969	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Shewana3_1969	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewana3_1969	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewana3_1969	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Shewana3_1969	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Shewana3_1971	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
Shewana3_1971	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
Shewana3_1971	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
Shewana3_1971	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Shewana3_1971	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
Shewana3_1971	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
Shewana3_1971	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
Shewana3_1971	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
Shewana3_1971	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Shewana3_1971	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
Shewana3_1974	PWY-5913	TCA cycle VI (obligate autotrophs)
Shewana3_1974	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Shewana3_1974	PWY-6638	sulfolactate degradation III
Shewana3_1974	PWY-6642	(<i>R</i>)-cysteate degradation
Shewana3_1974	PWY-6643	coenzyme M biosynthesis II
Shewana3_1974	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Shewana3_1974	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Shewana3_1974	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Shewana3_1975	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Shewana3_1976	PWY-7205	CMP phosphorylation
Shewana3_1981	PWY-5686	UMP biosynthesis
Shewana3_1985	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Shewana3_1985	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Shewana3_1988	PWY-5269	cardiolipin biosynthesis II
Shewana3_1988	PWY-5668	cardiolipin biosynthesis I
Shewana3_2040	PWY-6167	flavin biosynthesis II (archaea)
Shewana3_2040	PWY-6168	flavin biosynthesis III (fungi)
Shewana3_2040	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Shewana3_2054	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Shewana3_2064	PWY-4261	glycerol degradation I
Shewana3_2070	PWY-5101	L-isoleucine biosynthesis II
Shewana3_2070	PWY-5103	L-isoleucine biosynthesis III
Shewana3_2070	PWY-5104	L-isoleucine biosynthesis IV
Shewana3_2070	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Shewana3_2072	PWY-2723	trehalose degradation V
Shewana3_2072	PWY-6317	galactose degradation I (Leloir pathway)
Shewana3_2072	PWY-6737	starch degradation V
Shewana3_2107	PWY-3781	aerobic respiration I (cytochrome c)
Shewana3_2107	PWY-4521	arsenite oxidation I (respiratory)
Shewana3_2107	PWY-6692	Fe(II) oxidation
Shewana3_2107	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Shewana3_2108	PWY-3781	aerobic respiration I (cytochrome c)
Shewana3_2108	PWY-4521	arsenite oxidation I (respiratory)
Shewana3_2108	PWY-6692	Fe(II) oxidation
Shewana3_2108	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Shewana3_2121	PWY-5913	TCA cycle VI (obligate autotrophs)
Shewana3_2121	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Shewana3_2121	PWY-6638	sulfolactate degradation III
Shewana3_2121	PWY-6642	(<i>R</i>)-cysteate degradation
Shewana3_2121	PWY-6643	coenzyme M biosynthesis II
Shewana3_2121	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Shewana3_2121	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Shewana3_2121	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Shewana3_2122	PWY-1042	glycolysis IV (plant cytosol)
Shewana3_2122	PWY-5484	glycolysis II (from fructose 6-phosphate)
Shewana3_2122	PWY-6901	superpathway of glucose and xylose degradation
Shewana3_2122	PWY-7003	glycerol degradation to butanol
Shewana3_2124	PWY-1042	glycolysis IV (plant cytosol)
Shewana3_2124	PWY-5484	glycolysis II (from fructose 6-phosphate)
Shewana3_2124	PWY-6901	superpathway of glucose and xylose degradation
Shewana3_2124	PWY-7003	glycerol degradation to butanol
Shewana3_2125	PWY-6854	ethylene biosynthesis III (microbes)
Shewana3_2128	PWY-5316	nicotine biosynthesis
Shewana3_2128	PWY-7342	superpathway of nicotine biosynthesis
Shewana3_2129	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Shewana3_2134	PWY-2723	trehalose degradation V
Shewana3_2134	PWY-3801	sucrose degradation II (sucrose synthase)
Shewana3_2134	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Shewana3_2134	PWY-5661	GDP-glucose biosynthesis
Shewana3_2134	PWY-5661-1	Shewana3_2134
Shewana3_2134	PWY-5940	streptomycin biosynthesis
Shewana3_2134	PWY-5941	glycogen degradation II (eukaryotic)
Shewana3_2134	PWY-622	starch biosynthesis
Shewana3_2134	PWY-6731	starch degradation III
Shewana3_2134	PWY-6737	starch degradation V
Shewana3_2134	PWY-6749	CMP-legionaminate biosynthesis I
Shewana3_2134	PWY-7238	sucrose biosynthesis II
Shewana3_2134	PWY-7343	UDP-glucose biosynthesis
Shewana3_2148	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Shewana3_2148	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Shewana3_2148	PWY-7242	D-fructuronate degradation
Shewana3_2148	PWY-7310	D-glucosaminate degradation
Shewana3_2149	PWY-5101	L-isoleucine biosynthesis II
Shewana3_2149	PWY-5103	L-isoleucine biosynthesis III
Shewana3_2149	PWY-5104	L-isoleucine biosynthesis IV
Shewana3_2149	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Shewana3_2150	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Shewana3_2150	PWY-6855	chitin degradation I (archaea)
Shewana3_2150	PWY-6906	chitin derivatives degradation
Shewana3_2151	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Shewana3_2153	PWY-1042	glycolysis IV (plant cytosol)
Shewana3_2153	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Shewana3_2153	PWY-5484	glycolysis II (from fructose 6-phosphate)
Shewana3_2153	PWY-5723	Rubisco shunt
Shewana3_2153	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Shewana3_2153	PWY-6886	1-butanol autotrophic biosynthesis
Shewana3_2153	PWY-6901	superpathway of glucose and xylose degradation
Shewana3_2153	PWY-7003	glycerol degradation to butanol
Shewana3_2153	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Shewana3_2153	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Shewana3_2163	PWY-6703	preQ<sub>0</sub> biosynthesis
Shewana3_2164	PWY-6703	preQ<sub>0</sub> biosynthesis
Shewana3_2208	PWY-4702	phytate degradation I
Shewana3_2223	PWY-5392	reductive TCA cycle II
Shewana3_2223	PWY-5537	pyruvate fermentation to acetate V
Shewana3_2223	PWY-5538	pyruvate fermentation to acetate VI
Shewana3_2223	PWY-5690	TCA cycle II (plants and fungi)
Shewana3_2223	PWY-5913	TCA cycle VI (obligate autotrophs)
Shewana3_2223	PWY-6728	methylaspartate cycle
Shewana3_2223	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Shewana3_2223	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Shewana3_2232	PWY-5386	methylglyoxal degradation I
Shewana3_2269	PWY-5101	L-isoleucine biosynthesis II
Shewana3_2269	PWY-5103	L-isoleucine biosynthesis III
Shewana3_2269	PWY-5104	L-isoleucine biosynthesis IV
Shewana3_2269	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Shewana3_2269	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Shewana3_2269	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Shewana3_2269	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Shewana3_2270	PWY-5101	L-isoleucine biosynthesis II
Shewana3_2270	PWY-5103	L-isoleucine biosynthesis III
Shewana3_2270	PWY-5104	L-isoleucine biosynthesis IV
Shewana3_2270	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Shewana3_2270	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Shewana3_2270	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Shewana3_2270	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Shewana3_2272	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Shewana3_2272	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Shewana3_2272	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Shewana3_2272	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewana3_2272	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Shewana3_2272	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Shewana3_2272	PWY-7205	CMP phosphorylation
Shewana3_2272	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Shewana3_2272	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewana3_2272	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Shewana3_2272	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewana3_2272	PWY-7224	purine deoxyribonucleosides salvage
Shewana3_2272	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Shewana3_2272	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Shewana3_2280	PWY-6823	molybdenum cofactor biosynthesis
Shewana3_2280	PWY-6891	thiazole biosynthesis II (Bacillus)
Shewana3_2280	PWY-6892	thiazole biosynthesis I (E. coli)
Shewana3_2280	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Shewana3_2282	PWY-6936	seleno-amino acid biosynthesis
Shewana3_2282	PWY-7274	D-cycloserine biosynthesis
Shewana3_2284	PWY-2301	<i>myo</i>-inositol biosynthesis
Shewana3_2284	PWY-4702	phytate degradation I
Shewana3_2284	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Shewana3_2293	PWY-6902	chitin degradation II
Shewana3_2302	PWY-5392	reductive TCA cycle II
Shewana3_2302	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Shewana3_2302	PWY-5690	TCA cycle II (plants and fungi)
Shewana3_2302	PWY-5913	TCA cycle VI (obligate autotrophs)
Shewana3_2302	PWY-6728	methylaspartate cycle
Shewana3_2302	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Shewana3_2302	PWY-7254	TCA cycle VII (acetate-producers)
Shewana3_2302	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Shewana3_2303	PWY-5958	acridone alkaloid biosynthesis
Shewana3_2303	PWY-6543	4-aminobenzoate biosynthesis
Shewana3_2303	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Shewana3_2303	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Shewana3_2303	PWY-6722	candicidin biosynthesis
Shewana3_2307	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Shewana3_2307	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Shewana3_2330	PWY-1042	glycolysis IV (plant cytosol)
Shewana3_2330	PWY-5484	glycolysis II (from fructose 6-phosphate)
Shewana3_2330	PWY-6901	superpathway of glucose and xylose degradation
Shewana3_2330	PWY-7003	glycerol degradation to butanol
Shewana3_2343	PWY-4621	arsenate detoxification II (glutaredoxin)
Shewana3_2345	PWY-4202	arsenate detoxification I (glutaredoxin)
Shewana3_2345	PWY-4621	arsenate detoxification II (glutaredoxin)
Shewana3_2363	PWY-5674	nitrate reduction IV (dissimilatory)
Shewana3_2369	PWY-5386	methylglyoxal degradation I
Shewana3_2392	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Shewana3_2392	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Shewana3_2402	PWY-7039	phosphatidate metabolism, as a signaling molecule
Shewana3_2413	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Shewana3_2414	PWY-6936	seleno-amino acid biosynthesis
Shewana3_2441	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Shewana3_2447	PWY-6605	adenine and adenosine salvage II
Shewana3_2447	PWY-6610	adenine and adenosine salvage IV
Shewana3_2487	PWY-4041	&gamma;-glutamyl cycle
Shewana3_2487	PWY-5826	hypoglycin biosynthesis
Shewana3_2503	PWY-4202	arsenate detoxification I (glutaredoxin)
Shewana3_2503	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Shewana3_2503	PWY-6608	guanosine nucleotides degradation III
Shewana3_2503	PWY-6609	adenine and adenosine salvage III
Shewana3_2503	PWY-6611	adenine and adenosine salvage V
Shewana3_2503	PWY-6620	guanine and guanosine salvage
Shewana3_2503	PWY-6627	salinosporamide A biosynthesis
Shewana3_2503	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Shewana3_2503	PWY-7179	purine deoxyribonucleosides degradation I
Shewana3_2503	PWY-7179-1	purine deoxyribonucleosides degradation
Shewana3_2516	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Shewana3_2517	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Shewana3_2519	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Shewana3_2523	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Shewana3_2523	PWY-7118	chitin degradation to ethanol
Shewana3_2544	PWY-7183	pyrimidine nucleobases salvage I
Shewana3_2545	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Shewana3_2545	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Shewana3_2545	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Shewana3_2546	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Shewana3_2546	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Shewana3_2553	PWY-2723	trehalose degradation V
Shewana3_2553	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Shewana3_2553	PWY-5661	GDP-glucose biosynthesis
Shewana3_2553	PWY-5940	streptomycin biosynthesis
Shewana3_2553	PWY-621	sucrose degradation III (sucrose invertase)
Shewana3_2553	PWY-622	starch biosynthesis
Shewana3_2553	PWY-6731	starch degradation III
Shewana3_2553	PWY-6737	starch degradation V
Shewana3_2553	PWY-6981	chitin biosynthesis
Shewana3_2553	PWY-7238	sucrose biosynthesis II
Shewana3_2553	PWY-7343	UDP-glucose biosynthesis
Shewana3_2558	PWY-5367	petroselinate biosynthesis
Shewana3_2558	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Shewana3_2558	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Shewana3_2558	PWY-5989	stearate biosynthesis II (bacteria and plants)
Shewana3_2558	PWY-5994	palmitate biosynthesis I (animals and fungi)
Shewana3_2558	PWY-6113	superpathway of mycolate biosynthesis
Shewana3_2558	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Shewana3_2558	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Shewana3_2558	PWY-6951	Shewana3_2558
Shewana3_2558	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Shewana3_2558	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Shewana3_2558	PWYG-321	mycolate biosynthesis
Shewana3_2559	PWY-4381	fatty acid biosynthesis initiation I
Shewana3_2559	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Shewana3_2559	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Shewana3_2560	PWY-4381	fatty acid biosynthesis initiation I
Shewana3_2573	PWY-6556	pyrimidine ribonucleosides salvage II
Shewana3_2573	PWY-7181	pyrimidine deoxyribonucleosides degradation
Shewana3_2573	PWY-7193	pyrimidine ribonucleosides salvage I
Shewana3_2573	PWY-7199	pyrimidine deoxyribonucleosides salvage
Shewana3_2600	PWY-6168	flavin biosynthesis III (fungi)
Shewana3_2600	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Shewana3_2603	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewana3_2603	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewana3_2603	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewana3_2663	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Shewana3_2663	PWY-2201	folate transformations I
Shewana3_2663	PWY-3841	folate transformations II
Shewana3_2663	PWY-5030	L-histidine degradation III
Shewana3_2663	PWY-5497	purine nucleobases degradation II (anaerobic)
Shewana3_2663	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Shewana3_2669	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Shewana3_2672	PWY-5674	nitrate reduction IV (dissimilatory)
Shewana3_2677	PWY-5674	nitrate reduction IV (dissimilatory)
Shewana3_2683	PWY-5506	methanol oxidation to formaldehyde IV
Shewana3_2697	PWY-6906	chitin derivatives degradation
Shewana3_2697	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Shewana3_2697	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Shewana3_2707	PWY-6749	CMP-legionaminate biosynthesis I
Shewana3_2715	PWY-4381	fatty acid biosynthesis initiation I
Shewana3_2758	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Shewana3_2758	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Shewana3_2770	PWY-5642	2,4-dinitrotoluene degradation
Shewana3_2770	PWY-6373	acrylate degradation
Shewana3_2780	PWY-7158	L-phenylalanine degradation V
Shewana3_2781	PWY-6134	L-tyrosine biosynthesis IV
Shewana3_2781	PWY-7158	L-phenylalanine degradation V
Shewana3_2782	PWY-3801	sucrose degradation II (sucrose synthase)
Shewana3_2782	PWY-6527	stachyose degradation
Shewana3_2782	PWY-6981	chitin biosynthesis
Shewana3_2782	PWY-7238	sucrose biosynthesis II
Shewana3_2782	PWY-7343	UDP-glucose biosynthesis
Shewana3_2783	PWY-3821	galactose degradation III
Shewana3_2783	PWY-6317	galactose degradation I (Leloir pathway)
Shewana3_2783	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Shewana3_2783	PWY-6527	stachyose degradation
Shewana3_2783	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Shewana3_2783	PWY-7344	UDP-D-galactose biosynthesis
Shewana3_2804	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Shewana3_2804	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Shewana3_2804	PWY-5989	stearate biosynthesis II (bacteria and plants)
Shewana3_2804	PWY-5994	palmitate biosynthesis I (animals and fungi)
Shewana3_2804	PWY-6113	superpathway of mycolate biosynthesis
Shewana3_2804	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Shewana3_2804	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Shewana3_2804	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Shewana3_2804	PWYG-321	mycolate biosynthesis
Shewana3_2809	PWY-7560	methylerythritol phosphate pathway II
Shewana3_2821	PWY-2201	folate transformations I
Shewana3_2821	PWY-5497	purine nucleobases degradation II (anaerobic)
Shewana3_2822	PWY-7310	D-glucosaminate degradation
Shewana3_2835	PWY-6700	queuosine biosynthesis
Shewana3_2838	PWY-6012	acyl carrier protein metabolism I
Shewana3_2838	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Shewana3_2842	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Shewana3_2842	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Shewana3_2842	PWY-5989	stearate biosynthesis II (bacteria and plants)
Shewana3_2842	PWY-5994	palmitate biosynthesis I (animals and fungi)
Shewana3_2842	PWY-6113	superpathway of mycolate biosynthesis
Shewana3_2842	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Shewana3_2842	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Shewana3_2842	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Shewana3_2842	PWYG-321	mycolate biosynthesis
Shewana3_2843	PWY-4381	fatty acid biosynthesis initiation I
Shewana3_2843	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Shewana3_2843	PWY-723	alkylnitronates degradation
Shewana3_2843	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Shewana3_2848	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Shewana3_2848	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Shewana3_2848	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Shewana3_2869	PWY-5451	acetone degradation I (to methylglyoxal)
Shewana3_2869	PWY-6588	pyruvate fermentation to acetone
Shewana3_2869	PWY-6876	isopropanol biosynthesis
Shewana3_2869	PWY-7466	acetone degradation III (to propane-1,2-diol)
Shewana3_2901	PWY-6891	thiazole biosynthesis II (Bacillus)
Shewana3_2901	PWY-6892	thiazole biosynthesis I (E. coli)
Shewana3_2901	PWY-7560	methylerythritol phosphate pathway II
Shewana3_2903	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Shewana3_2903	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Shewana3_2903	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Shewana3_2905	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Shewana3_2905	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Shewana3_2930	PWY-622	starch biosynthesis
Shewana3_2931	PWY-622	starch biosynthesis
Shewana3_2932	PWY-5941	glycogen degradation II (eukaryotic)
Shewana3_2932	PWY-622	starch biosynthesis
Shewana3_2932	PWY-6731	starch degradation III
Shewana3_2932	PWY-6737	starch degradation V
Shewana3_2932	PWY-7238	sucrose biosynthesis II
Shewana3_2934	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Shewana3_2934	PWY-622	starch biosynthesis
Shewana3_2935	PWY-5941	glycogen degradation II (eukaryotic)
Shewana3_2935	PWY-6724	starch degradation II
Shewana3_2935	PWY-6737	starch degradation V
Shewana3_2935	PWY-7238	sucrose biosynthesis II
Shewana3_2942	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Shewana3_2943	PWY-6728	methylaspartate cycle
Shewana3_2943	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Shewana3_2943	PWY-7118	chitin degradation to ethanol
Shewana3_2943	PWY-7294	xylose degradation IV
Shewana3_2943	PWY-7295	L-arabinose degradation IV
Shewana3_2984	PWY-6902	chitin degradation II
Shewana3_3006	PWY-5988	wound-induced proteolysis I
Shewana3_3006	PWY-6018	seed germination protein turnover
Shewana3_3007	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Shewana3_3007	PWY-3461	L-tyrosine biosynthesis II
Shewana3_3007	PWY-3462	L-phenylalanine biosynthesis II
Shewana3_3007	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Shewana3_3007	PWY-6120	L-tyrosine biosynthesis III
Shewana3_3007	PWY-6627	salinosporamide A biosynthesis
Shewana3_3007	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Shewana3_3012	PWY-3461	L-tyrosine biosynthesis II
Shewana3_3012	PWY-3462	L-phenylalanine biosynthesis II
Shewana3_3012	PWY-6120	L-tyrosine biosynthesis III
Shewana3_3012	PWY-6627	salinosporamide A biosynthesis
Shewana3_3012	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
Shewana3_3013	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Shewana3_3013	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Shewana3_3013	PWY-6164	3-dehydroquinate biosynthesis I
Shewana3_3015	PWY-6829	tRNA methylation (yeast)
Shewana3_3015	PWY-7285	methylwyosine biosynthesis
Shewana3_3015	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Shewana3_3022	PWY-6012	acyl carrier protein metabolism I
Shewana3_3022	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Shewana3_3033	PWY-5316	nicotine biosynthesis
Shewana3_3033	PWY-7342	superpathway of nicotine biosynthesis
Shewana3_3039	PWY-3841	folate transformations II
Shewana3_3039	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Shewana3_3039	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewana3_3039	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Shewana3_3039	PWY-7199	pyrimidine deoxyribonucleosides salvage
Shewana3_3039	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Shewana3_3052	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Shewana3_3052	PWY-6153	autoinducer AI-2 biosynthesis I
Shewana3_3052	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
Shewana3_3070	PWY-5686	UMP biosynthesis
Shewana3_3071	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Shewana3_3080	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Shewana3_3080	PWY-6148	tetrahydromethanopterin biosynthesis
Shewana3_3080	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Shewana3_3080	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Shewana3_3081	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Shewana3_3081	PWY-6148	tetrahydromethanopterin biosynthesis
Shewana3_3081	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Shewana3_3081	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Shewana3_3098	PWY-381	nitrate reduction II (assimilatory)
Shewana3_3098	PWY-5675	nitrate reduction V (assimilatory)
Shewana3_3098	PWY-6549	L-glutamine biosynthesis III
Shewana3_3098	PWY-6963	ammonia assimilation cycle I
Shewana3_3098	PWY-6964	ammonia assimilation cycle II
Shewana3_3107	PWY-5642	2,4-dinitrotoluene degradation
Shewana3_3107	PWY-6373	acrylate degradation
Shewana3_3108	PWY-5692	allantoin degradation to glyoxylate II
Shewana3_3108	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
Shewana3_3112	PWY-6906	chitin derivatives degradation
Shewana3_3112	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Shewana3_3112	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Shewana3_3115	PWY-6902	chitin degradation II
Shewana3_3133	PWY-7560	methylerythritol phosphate pathway II
Shewana3_3137	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Shewana3_3137	PWY-6167	flavin biosynthesis II (archaea)
Shewana3_3137	PWY-6168	flavin biosynthesis III (fungi)
Shewana3_3147	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Shewana3_3147	PWY-5723	Rubisco shunt
Shewana3_3148	PWY-3801	sucrose degradation II (sucrose synthase)
Shewana3_3148	PWY-5054	sorbitol biosynthesis I
Shewana3_3148	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Shewana3_3148	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Shewana3_3148	PWY-5659	GDP-mannose biosynthesis
Shewana3_3148	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Shewana3_3148	PWY-621	sucrose degradation III (sucrose invertase)
Shewana3_3148	PWY-622	starch biosynthesis
Shewana3_3148	PWY-6531	mannitol cycle
Shewana3_3148	PWY-6981	chitin biosynthesis
Shewana3_3148	PWY-7238	sucrose biosynthesis II
Shewana3_3148	PWY-7347	sucrose biosynthesis III
Shewana3_3148	PWY-7385	1,3-propanediol biosynthesis (engineered)
Shewana3_3155	PWY-6123	inosine-5'-phosphate biosynthesis I
Shewana3_3155	PWY-7234	inosine-5'-phosphate biosynthesis III
Shewana3_3160	PWY-6840	homoglutathione biosynthesis
Shewana3_3160	PWY-7255	ergothioneine biosynthesis I (bacteria)
Shewana3_3164	PWY-6339	syringate degradation
Shewana3_3166	PWY-6339	syringate degradation
Shewana3_3167	PWY-5669	phosphatidylethanolamine biosynthesis I
Shewana3_3188	PWY-6936	seleno-amino acid biosynthesis
Shewana3_3214	PWY-3841	folate transformations II
Shewana3_3214	PWY-6614	tetrahydrofolate biosynthesis
Shewana3_3233	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Shewana3_3233	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Shewana3_3263	PWY-5686	UMP biosynthesis
Shewana3_3274	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Shewana3_3274	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Shewana3_3274	PWY-6268	adenosylcobalamin salvage from cobalamin
Shewana3_3274	PWY-6269	adenosylcobalamin salvage from cobinamide II
Shewana3_3276	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Shewana3_3276	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Shewana3_3276	PWY-6269	adenosylcobalamin salvage from cobinamide II
Shewana3_3277	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Shewana3_3277	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Shewana3_3277	PWY-6269	adenosylcobalamin salvage from cobinamide II
Shewana3_3278	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Shewana3_3278	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Shewana3_3278	PWY-6269	adenosylcobalamin salvage from cobinamide II
Shewana3_3282	PWY-2201	folate transformations I
Shewana3_3282	PWY-3841	folate transformations II
Shewana3_3298	PWY-1881	formate oxidation to CO<sub>2</sub>
Shewana3_3298	PWY-5497	purine nucleobases degradation II (anaerobic)
Shewana3_3298	PWY-6696	oxalate degradation III
Shewana3_3310	PWY-4261	glycerol degradation I
Shewana3_3310	PWY-6118	glycerol-3-phosphate shuttle
Shewana3_3310	PWY-6952	glycerophosphodiester degradation
Shewana3_3324	PWY-5988	wound-induced proteolysis I
Shewana3_3324	PWY-6018	seed germination protein turnover
Shewana3_3350	PWY-1042	glycolysis IV (plant cytosol)
Shewana3_3350	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Shewana3_3350	PWY-5484	glycolysis II (from fructose 6-phosphate)
Shewana3_3350	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Shewana3_3350	PWY-7385	1,3-propanediol biosynthesis (engineered)
Shewana3_3351	PWY-1042	glycolysis IV (plant cytosol)
Shewana3_3351	PWY-5484	glycolysis II (from fructose 6-phosphate)
Shewana3_3351	PWY-6886	1-butanol autotrophic biosynthesis
Shewana3_3351	PWY-6901	superpathway of glucose and xylose degradation
Shewana3_3351	PWY-7003	glycerol degradation to butanol
Shewana3_3353	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Shewana3_3353	PWY-5723	Rubisco shunt
Shewana3_3353	PWY-6891	thiazole biosynthesis II (Bacillus)
Shewana3_3353	PWY-6892	thiazole biosynthesis I (E. coli)
Shewana3_3353	PWY-6901	superpathway of glucose and xylose degradation
Shewana3_3353	PWY-7560	methylerythritol phosphate pathway II
Shewana3_3354	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Shewana3_3354	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Shewana3_3357	PWY-7310	D-glucosaminate degradation
Shewana3_3395	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Shewana3_3400	PWY-5723	Rubisco shunt
Shewana3_3402	PWY-5988	wound-induced proteolysis I
Shewana3_3402	PWY-6018	seed germination protein turnover
Shewana3_3407	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Shewana3_3407	PWY-6148	tetrahydromethanopterin biosynthesis
Shewana3_3407	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Shewana3_3407	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Shewana3_3408	PWY-6654	phosphopantothenate biosynthesis III
Shewana3_3438	PWY-4381	fatty acid biosynthesis initiation I
Shewana3_3438	PWY-5743	3-hydroxypropanoate cycle
Shewana3_3438	PWY-5744	glyoxylate assimilation
Shewana3_3438	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Shewana3_3438	PWY-6679	jadomycin biosynthesis
Shewana3_3438	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Shewana3_3446	PWY-5491	diethylphosphate degradation
Shewana3_3464	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Shewana3_3465	PWY-43	putrescine biosynthesis II
Shewana3_3469	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Shewana3_3469	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Shewana3_3469	PWY-6936	seleno-amino acid biosynthesis
Shewana3_3469	PWY-702	L-methionine biosynthesis II
Shewana3_3509	PWY-1622	formaldehyde assimilation I (serine pathway)
Shewana3_3509	PWY-5392	reductive TCA cycle II
Shewana3_3509	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Shewana3_3509	PWY-5690	TCA cycle II (plants and fungi)
Shewana3_3509	PWY-5913	TCA cycle VI (obligate autotrophs)
Shewana3_3509	PWY-6728	methylaspartate cycle
Shewana3_3509	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Shewana3_3509	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Shewana3_3509	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Shewana3_3514	PWY-4041	&gamma;-glutamyl cycle
Shewana3_3514	PWY-5826	hypoglycin biosynthesis
Shewana3_3528	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Shewana3_3528	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Shewana3_3528	PWY-6164	3-dehydroquinate biosynthesis I
Shewana3_3539	PWY-5491	diethylphosphate degradation
Shewana3_3540	PWY-5491	diethylphosphate degradation
Shewana3_3578	PWY-3821	galactose degradation III
Shewana3_3578	PWY-6317	galactose degradation I (Leloir pathway)
Shewana3_3578	PWY-6527	stachyose degradation
Shewana3_3579	PWY-2723	trehalose degradation V
Shewana3_3579	PWY-6317	galactose degradation I (Leloir pathway)
Shewana3_3579	PWY-6737	starch degradation V
Shewana3_3612	PWY-2201	folate transformations I
Shewana3_3612	PWY-3841	folate transformations II
Shewana3_3613	PWY-2941	L-lysine biosynthesis II
Shewana3_3613	PWY-2942	L-lysine biosynthesis III
Shewana3_3613	PWY-5097	L-lysine biosynthesis VI
Shewana3_3613	PWY-6559	spermidine biosynthesis II
Shewana3_3613	PWY-6562	norspermidine biosynthesis
Shewana3_3613	PWY-7153	grixazone biosynthesis
Shewana3_3622	PWY-6123	inosine-5'-phosphate biosynthesis I
Shewana3_3622	PWY-6124	inosine-5'-phosphate biosynthesis II
Shewana3_3622	PWY-7234	inosine-5'-phosphate biosynthesis III
Shewana3_3680	PWY-4202	arsenate detoxification I (glutaredoxin)
Shewana3_3680	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Shewana3_3680	PWY-6608	guanosine nucleotides degradation III
Shewana3_3680	PWY-6609	adenine and adenosine salvage III
Shewana3_3680	PWY-6611	adenine and adenosine salvage V
Shewana3_3680	PWY-6620	guanine and guanosine salvage
Shewana3_3680	PWY-6627	salinosporamide A biosynthesis
Shewana3_3680	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Shewana3_3680	PWY-7179	purine deoxyribonucleosides degradation I
Shewana3_3680	PWY-7179-1	purine deoxyribonucleosides degradation
Shewana3_3690	PWY-5674	nitrate reduction IV (dissimilatory)
Shewana3_3725	PWY-5839	menaquinol-7 biosynthesis
Shewana3_3725	PWY-5844	menaquinol-9 biosynthesis
Shewana3_3725	PWY-5849	menaquinol-6 biosynthesis
Shewana3_3725	PWY-5890	menaquinol-10 biosynthesis
Shewana3_3725	PWY-5891	menaquinol-11 biosynthesis
Shewana3_3725	PWY-5892	menaquinol-12 biosynthesis
Shewana3_3725	PWY-5895	menaquinol-13 biosynthesis
Shewana3_3734	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Shewana3_3734	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Shewana3_3742	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Shewana3_3742	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Shewana3_3743	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Shewana3_3743	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Shewana3_3743	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Shewana3_3743	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Shewana3_3745	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Shewana3_3745	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Shewana3_3746	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Shewana3_3746	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Shewana3_3746	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Shewana3_3747	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Shewana3_3747	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Shewana3_3756	PWY-4261	glycerol degradation I
Shewana3_3760	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Shewana3_3761	PWY-6871	3-methylbutanol biosynthesis
Shewana3_3767	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Shewana3_3772	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Shewana3_3772	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Shewana3_3772	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewana3_3772	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Shewana3_3775	PWY-5663	tetrahydrobiopterin biosynthesis I
Shewana3_3775	PWY-5664	tetrahydrobiopterin biosynthesis II
Shewana3_3775	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Shewana3_3775	PWY-6703	preQ<sub>0</sub> biosynthesis
Shewana3_3775	PWY-6983	tetrahydrobiopterin biosynthesis III
Shewana3_3775	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Shewana3_3776	PWY-5686	UMP biosynthesis
Shewana3_3810	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Shewana3_3825	PWY-5747	2-methylcitrate cycle II
Shewana3_3830	PWY-5057	L-valine degradation II
Shewana3_3830	PWY-5076	L-leucine degradation III
Shewana3_3830	PWY-5078	L-isoleucine degradation II
Shewana3_3830	PWY-5101	L-isoleucine biosynthesis II
Shewana3_3830	PWY-5103	L-isoleucine biosynthesis III
Shewana3_3830	PWY-5104	L-isoleucine biosynthesis IV
Shewana3_3830	PWY-5108	L-isoleucine biosynthesis V
Shewana3_3871	PWY-46	putrescine biosynthesis III
Shewana3_3871	PWY-6305	putrescine biosynthesis IV
Shewana3_3882	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
Shewana3_3887	PWY-181	photorespiration
Shewana3_3888	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Shewana3_3888	PWY-5723	Rubisco shunt
Shewana3_3893	PWY-6164	3-dehydroquinate biosynthesis I
Shewana3_3894	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Shewana3_3901	PWY-4983	L-citrulline-nitric oxide cycle
Shewana3_3901	PWY-4984	urea cycle
Shewana3_3901	PWY-5	canavanine biosynthesis
Shewana3_3901	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Shewana3_3901	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Shewana3_3902	PWY-4983	L-citrulline-nitric oxide cycle
Shewana3_3902	PWY-4984	urea cycle
Shewana3_3902	PWY-5	canavanine biosynthesis
Shewana3_3902	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Shewana3_3902	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Shewana3_3903	PWY-4981	L-proline biosynthesis II (from arginine)
Shewana3_3903	PWY-4984	urea cycle
Shewana3_3903	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Shewana3_3904	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Shewana3_3904	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Shewana3_3905	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Shewana3_3905	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Shewana3_3906	PWY-1622	formaldehyde assimilation I (serine pathway)
Shewana3_3906	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Shewana3_3906	PWY-5913	TCA cycle VI (obligate autotrophs)
Shewana3_3906	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Shewana3_3906	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Shewana3_3906	PWY-6549	L-glutamine biosynthesis III
Shewana3_3906	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Shewana3_3906	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Shewana3_3906	PWY-7124	ethylene biosynthesis V (engineered)
Shewana3_3965	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Shewana3_3965	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Shewana3_3966	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Shewana3_3966	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Shewana3_3967	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Shewana3_3967	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Shewana3_3968	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Shewana3_3968	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Shewana3_3988	PWY-5667	CDP-diacylglycerol biosynthesis I
Shewana3_3988	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
Shewana3_3992	PWY-3781	aerobic respiration I (cytochrome c)
Shewana3_3992	PWY-4521	arsenite oxidation I (respiratory)
Shewana3_3992	PWY-6692	Fe(II) oxidation
Shewana3_3992	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Shewana3_4010	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Shewana3_4032	PWY-3781	aerobic respiration I (cytochrome c)
Shewana3_4032	PWY-4521	arsenite oxidation I (respiratory)
Shewana3_4032	PWY-6692	Fe(II) oxidation
Shewana3_4032	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Shewana3_4032	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
Shewana3_4054	PWY-4081	glutathione redox reactions I
Shewana3_4060	PWY-6728	methylaspartate cycle
Shewana3_4060	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Shewana3_4060	PWY-7118	chitin degradation to ethanol
Shewana3_4060	PWY-7294	xylose degradation IV
Shewana3_4060	PWY-7295	L-arabinose degradation IV
Shewana3_4071	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Shewana3_4071	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Shewana3_4071	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Shewana3_4071	PWY-6406	salicylate biosynthesis I
Shewana3_4080	PWY-5964	guanylyl molybdenum cofactor biosynthesis
Shewana3_4081	PWY-6823	molybdenum cofactor biosynthesis
Shewana3_4082	PWY-6823	molybdenum cofactor biosynthesis
Shewana3_4088	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Shewana3_4105	PWY-7378	aminopropanol phosphate biosynthesis II
Shewana3_4117	PWY-6609	adenine and adenosine salvage III
Shewana3_4117	PWY-6611	adenine and adenosine salvage V
Shewana3_4117	PWY-7179	purine deoxyribonucleosides degradation I
Shewana3_4117	PWY-7179-1	purine deoxyribonucleosides degradation
Shewana3_4123	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Shewana3_4123	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Shewana3_4125	PWY-6749	CMP-legionaminate biosynthesis I
Shewana3_4128	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Shewana3_4130	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Shewana3_4132	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis