Shewana3_0001	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_0002	SSF51905	FAD/NAD(P)-binding domain
Shewana3_0003	SSF52218	Flavoproteins
Shewana3_0004	SSF103473	MFS general substrate transporter
Shewana3_0005	SSF116878	TrmE connector domain
Shewana3_0005	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0008	SSF54211	Ribosomal protein S5 domain 2-like
Shewana3_0009	SSF48295	TrpR-like
Shewana3_0009	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0010	SSF55979	DNA clamp
Shewana3_0011	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0012	SSF54211	Ribosomal protein S5 domain 2-like
Shewana3_0012	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_0012	SSF56719	Type II DNA topoisomerase
Shewana3_0013	SSF47616	GST C-terminal domain-like
Shewana3_0013	SSF52833	Thioredoxin-like
Shewana3_0014	SSF46785	"Winged helix" DNA-binding domain
Shewana3_0014	SSF53850	Periplasmic binding protein-like II
Shewana3_0015	SSF109604	HD-domain/PDEase-like
Shewana3_0016	SSF109604	HD-domain/PDEase-like
Shewana3_0017	SSF55681	Class II aaRS and biotin synthetases
Shewana3_0018	SSF48150	DNA-glycosylase
Shewana3_0019	SSF51338	Composite domain of metallo-dependent hydrolases
Shewana3_0019	SSF51556	Metallo-dependent hydrolases
Shewana3_0019	SSF82171	DPP6 N-terminal domain-like
Shewana3_0020	SSF50800	PK beta-barrel domain-like
Shewana3_0021	SSF64307	SirA-like
Shewana3_0022	SSF46458	Globin-like
Shewana3_0022	SSF55073	Nucleotide cyclase
Shewana3_0023	SSF53901	Thiolase-like
Shewana3_0024	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Shewana3_0024	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_0024	SSF52096	ClpP/crotonase
Shewana3_0025	SSF53092	Creatinase/prolidase N-terminal domain
Shewana3_0025	SSF55920	Creatinase/aminopeptidase
Shewana3_0026	SSF54211	Ribosomal protein S5 domain 2-like
Shewana3_0026	SSF54980	EF-G C-terminal domain-like
Shewana3_0028	SSF52218	Flavoproteins
Shewana3_0029	SSF46785	"Winged helix" DNA-binding domain
Shewana3_0030	SSF52218	Flavoproteins
Shewana3_0032	SSF116726	TrkA C-terminal domain-like
Shewana3_0032	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_0033	SSF48013	NusB-like
Shewana3_0033	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_0034	SSF50486	FMT C-terminal domain-like
Shewana3_0034	SSF53328	Formyltransferase
Shewana3_0035	SSF56420	Peptide deformylase
Shewana3_0036	SSF54106	LysM domain
Shewana3_0037	SSF102405	MCP/YpsA-like
Shewana3_0039	SSF57783	Zinc beta-ribbon
Shewana3_0040	SSF55821	YrdC/RibB
Shewana3_0041	SSF102886	Coproporphyrinogen III oxidase
Shewana3_0042	SSF46458	Globin-like
Shewana3_0043	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_0043	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Shewana3_0044	SSF160272	Shew3726-like
Shewana3_0045	SSF51161	Trimeric LpxA-like enzymes
Shewana3_0047	SSF46785	"Winged helix" DNA-binding domain
Shewana3_0048	SSF88713	Glycoside hydrolase/deacetylase
Shewana3_0049	SSF50156	PDZ domain-like
Shewana3_0049	SSF52096	ClpP/crotonase
Shewana3_0050	SSF51261	Duplicated hybrid motif
Shewana3_0051	SSF53649	Alkaline phosphatase-like
Shewana3_0051	SSF64158	2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
Shewana3_0052	SSF52821	Rhodanese/Cell cycle control phosphatase
Shewana3_0053	SSF54611	SecB-like
Shewana3_0054	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Shewana3_0054	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_0055	SSF160996	HI0933 insert domain-like
Shewana3_0055	SSF51905	FAD/NAD(P)-binding domain
Shewana3_0058	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_0059	SSF52172	CheY-like
Shewana3_0060	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_0060	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_0061	SSF51182	RmlC-like cupins
Shewana3_0063	SSF54001	Cysteine proteinases
Shewana3_0064	SSF103473	MFS general substrate transporter
Shewana3_0065	SSF47413	lambda repressor-like DNA-binding domains
Shewana3_0065	SSF53822	Periplasmic binding protein-like I
Shewana3_0066	SSF51445	(Trans)glycosidases
Shewana3_0067	SSF103473	MFS general substrate transporter
Shewana3_0068	SSF56935	Porins
Shewana3_0069	SSF53613	Ribokinase-like
Shewana3_0070	SSF53218	Molybdenum cofactor biosynthesis proteins
Shewana3_0072	SSF46689	Homeodomain-like
Shewana3_0072	SSF52317	Class I glutamine amidotransferase-like
Shewana3_0075	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0076	SSF53474	alpha/beta-Hydrolases
Shewana3_0077	SSF46785	"Winged helix" DNA-binding domain
Shewana3_0078	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0080	SSF56801	Acetyl-CoA synthetase-like
Shewana3_0081	SSF82185	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
Shewana3_0082	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shewana3_0084	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_0085	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shewana3_0086	SSF46955	Putative DNA-binding domain
Shewana3_0087	SSF52218	Flavoproteins
Shewana3_0088	SSF51316	Mss4-like
Shewana3_0089	SSF56784	HAD-like
Shewana3_0092	SSF53098	Ribonuclease H-like
Shewana3_0093	SSF46689	Homeodomain-like
Shewana3_0096	SSF46785	"Winged helix" DNA-binding domain
Shewana3_0097	SSF63380	Riboflavin synthase domain-like
Shewana3_0098	SSF51338	Composite domain of metallo-dependent hydrolases
Shewana3_0098	SSF51556	Metallo-dependent hydrolases
Shewana3_0099	SSF46785	"Winged helix" DNA-binding domain
Shewana3_0099	SSF64288	Chorismate lyase-like
Shewana3_0100	SSF111326	Urocanase
Shewana3_0101	SSF48557	L-aspartase-like
Shewana3_0103	SSF54862	4Fe-4S ferredoxins
Shewana3_0104	SSF81342	Transmembrane di-heme cytochromes
Shewana3_0105	SSF144020	FdhE-like
Shewana3_0106	SSF53383	PLP-dependent transferases
Shewana3_0107	SSF46785	"Winged helix" DNA-binding domain
Shewana3_0107	SSF50447	Translation proteins
Shewana3_0107	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Shewana3_0107	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0108	SSF53927	Cytidine deaminase-like
Shewana3_0110	SSF64307	SirA-like
Shewana3_0111	SSF54523	Pili subunits
Shewana3_0113	SSF141488	YdhA-like
Shewana3_0117	SSF50182	Sm-like ribonucleoproteins
Shewana3_0118	SSF103473	MFS general substrate transporter
Shewana3_0119	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Shewana3_0120	SSF54427	NTF2-like
Shewana3_0124	SSF49299	PKD domain
Shewana3_0124	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shewana3_0125	SSF64288	Chorismate lyase-like
Shewana3_0127	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_0130	SSF69572	Activating enzymes of the ubiquitin-like proteins
Shewana3_0131	SSF53218	Molybdenum cofactor biosynthesis proteins
Shewana3_0131	SSF63867	MoeA C-terminal domain-like
Shewana3_0131	SSF63882	MoeA N-terminal region -like
Shewana3_0132	SSF47240	Ferritin-like
Shewana3_0133	SSF141868	EAL domain-like
Shewana3_0133	SSF55073	Nucleotide cyclase
Shewana3_0133	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_0134	SSF55821	YrdC/RibB
Shewana3_0135	SSF50993	Peptidase/esterase 'gauge' domain
Shewana3_0135	SSF53474	alpha/beta-Hydrolases
Shewana3_0136	SSF82771	GIY-YIG endonuclease
Shewana3_0139	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_0140	SSF53187	Zn-dependent exopeptidases
Shewana3_0142	SSF118215	Proton glutamate symport protein
Shewana3_0145	SSF103088	OmpA-like
Shewana3_0147	SSF53795	PEP carboxykinase-like
Shewana3_0147	SSF68923	PEP carboxykinase N-terminal domain
Shewana3_0148	SSF118352	HSP33 redox switch-like
Shewana3_0148	SSF64397	Hsp33 domain
Shewana3_0149	SSF55174	Alpha-L RNA-binding motif
Shewana3_0150	SSF50156	PDZ domain-like
Shewana3_0152	SSF160246	EspE N-terminal domain-like
Shewana3_0152	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0154	SSF54523	Pili subunits
Shewana3_0155	SSF54523	Pili subunits
Shewana3_0156	SSF54523	Pili subunits
Shewana3_0157	SSF54523	Pili subunits
Shewana3_0158	SSF158544	GspK insert domain-like
Shewana3_0158	SSF54523	Pili subunits
Shewana3_0159	SSF53067	Actin-like ATPase domain
Shewana3_0160	SSF103054	General secretion pathway protein M, EpsM
Shewana3_0162	SSF56784	HAD-like
Shewana3_0163	SSF51197	Clavaminate synthase-like
Shewana3_0164	SSF51197	Clavaminate synthase-like
Shewana3_0164	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_0165	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0166	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_0167	SSF88874	Receptor-binding domain of short tail fibre protein gp12
Shewana3_0168	SSF141072	CalX-like
Shewana3_0168	SSF49265	Fibronectin type III
Shewana3_0168	SSF49299	PKD domain
Shewana3_0168	SSF49313	Cadherin-like
Shewana3_0168	SSF56925	OMPA-like
Shewana3_0169	SSF55811	Nudix
Shewana3_0170	SSF56655	Carbohydrate phosphatase
Shewana3_0171	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_0172	SSF46689	Homeodomain-like
Shewana3_0172	SSF48498	Tetracyclin repressor-like, C-terminal domain
Shewana3_0173	SSF103473	MFS general substrate transporter
Shewana3_0173	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Shewana3_0175	SSF52821	Rhodanese/Cell cycle control phosphatase
Shewana3_0176	SSF55326	PurM N-terminal domain-like
Shewana3_0176	SSF56042	PurM C-terminal domain-like
Shewana3_0178	SSF46689	Homeodomain-like
Shewana3_0179	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_0180	SSF53681	Aspartate/glutamate racemase
Shewana3_0181	SSF54928	RNA-binding domain, RBD
Shewana3_0182	SSF56176	FAD-binding/transporter-associated domain-like
Shewana3_0182	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
Shewana3_0183	SSF46785	"Winged helix" DNA-binding domain
Shewana3_0183	SSF50037	C-terminal domain of transcriptional repressors
Shewana3_0183	SSF55681	Class II aaRS and biotin synthetases
Shewana3_0184	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0185	SSF50447	Translation proteins
Shewana3_0185	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Shewana3_0185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0187	SSF50104	Translation proteins SH3-like domain
Shewana3_0187	SSF82679	N-utilization substance G protein NusG, N-terminal domain
Shewana3_0188	SSF46906	Ribosomal protein L11, C-terminal domain
Shewana3_0188	SSF54747	Ribosomal L11/L12e N-terminal domain
Shewana3_0189	SSF56808	Ribosomal protein L1
Shewana3_0190	SSF160369	Ribosomal protein L10-like
Shewana3_0191	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Shewana3_0191	SSF54736	ClpS-like
Shewana3_0192	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
Shewana3_0193	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
Shewana3_0194	SSF50249	Nucleic acid-binding proteins
Shewana3_0195	SSF47973	Ribosomal protein S7
Shewana3_0196	SSF50447	Translation proteins
Shewana3_0196	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0196	SSF54211	Ribosomal protein S5 domain 2-like
Shewana3_0196	SSF54980	EF-G C-terminal domain-like
Shewana3_0197	SSF50447	Translation proteins
Shewana3_0197	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Shewana3_0197	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0198	SSF54999	Ribosomal protein S10
Shewana3_0199	SSF50447	Translation proteins
Shewana3_0200	SSF52166	Ribosomal protein L4
Shewana3_0201	SSF54189	Ribosomal proteins S24e, L23 and L15e
Shewana3_0202	SSF50104	Translation proteins SH3-like domain
Shewana3_0202	SSF50249	Nucleic acid-binding proteins
Shewana3_0203	SSF54570	Ribosomal protein S19
Shewana3_0204	SSF54843	Ribosomal protein L22
Shewana3_0205	SSF54814	Prokaryotic type KH domain (KH-domain type II)
Shewana3_0205	SSF54821	Ribosomal protein S3 C-terminal domain
Shewana3_0206	SSF54686	Ribosomal protein L16p/L10e
Shewana3_0207	SSF46561	Ribosomal protein L29 (L29p)
Shewana3_0208	SSF50249	Nucleic acid-binding proteins
Shewana3_0209	SSF50193	Ribosomal protein L14
Shewana3_0210	SSF50104	Translation proteins SH3-like domain
Shewana3_0211	SSF55282	RL5-like
Shewana3_0212	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Shewana3_0213	SSF56047	Ribosomal protein S8
Shewana3_0214	SSF56053	Ribosomal protein L6
Shewana3_0215	SSF53137	Translational machinery components
Shewana3_0216	SSF54211	Ribosomal protein S5 domain 2-like
Shewana3_0216	SSF54768	dsRNA-binding domain-like
Shewana3_0217	SSF55129	Ribosomal protein L30p/L7e
Shewana3_0218	SSF52080	Ribosomal proteins L15p and L18e
Shewana3_0219	SSF103491	Preprotein translocase SecY subunit
Shewana3_0220	SSF57840	Ribosomal protein L36
Shewana3_0221	SSF46946	S13-like H2TH domain
Shewana3_0222	SSF53137	Translational machinery components
Shewana3_0223	SSF55174	Alpha-L RNA-binding motif
Shewana3_0224	SSF47789	C-terminal domain of RNA polymerase alpha subunit
Shewana3_0224	SSF55257	RBP11-like subunits of RNA polymerase
Shewana3_0224	SSF56553	Insert subdomain of RNA polymerase alpha subunit
Shewana3_0225	SSF64263	Prokaryotic ribosomal protein L17
Shewana3_0227	SSF82093	Heme chaperone CcmE
Shewana3_0231	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0232	SSF46626	Cytochrome c
Shewana3_0233	SSF48452	TPR-like
Shewana3_0235	SSF52833	Thioredoxin-like
Shewana3_0237	SSF52833	Thioredoxin-like
Shewana3_0239	SSF109854	DinB/YfiT-like putative metalloenzymes
Shewana3_0240	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_0240	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_0241	SSF46894	C-terminal effector domain of the bipartite response regulators
Shewana3_0241	SSF52172	CheY-like
Shewana3_0244	SSF46626	Cytochrome c
Shewana3_0245	SSF81342	Transmembrane di-heme cytochromes
Shewana3_0248	SSF46785	"Winged helix" DNA-binding domain
Shewana3_0248	SSF53850	Periplasmic binding protein-like II
Shewana3_0249	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_0250	SSF53720	ALDH-like
Shewana3_0251	SSF46689	Homeodomain-like
Shewana3_0251	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0251	SSF55781	GAF domain-like
Shewana3_0252	SSF158472	HAMP domain-like
Shewana3_0252	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_0252	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_0253	SSF52172	CheY-like
Shewana3_0255	SSF160240	Cation efflux protein cytoplasmic domain-like
Shewana3_0255	SSF161111	Cation efflux protein transmembrane domain-like
Shewana3_0257	SSF56925	OMPA-like
Shewana3_0258	SSF46689	Homeodomain-like
Shewana3_0258	SSF52172	CheY-like
Shewana3_0258	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0259	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_0259	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_0259	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_0261	SSF56796	Dehydroquinate synthase-like
Shewana3_0262	SSF46689	Homeodomain-like
Shewana3_0262	SSF48498	Tetracyclin repressor-like, C-terminal domain
Shewana3_0263	SSF51182	RmlC-like cupins
Shewana3_0264	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_0265	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_0265	SSF56436	C-type lectin-like
Shewana3_0268	SSF53613	Ribokinase-like
Shewana3_0269	SSF55073	Nucleotide cyclase
Shewana3_0270	SSF50800	PK beta-barrel domain-like
Shewana3_0272	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_0273	SSF51905	FAD/NAD(P)-binding domain
Shewana3_0273	SSF54373	FAD-linked reductases, C-terminal domain
Shewana3_0273	SSF54862	4Fe-4S ferredoxins
Shewana3_0274	SSF102114	Radical SAM enzymes
Shewana3_0275	SSF55040	Molybdenum cofactor biosynthesis protein C, MoaC
Shewana3_0276	SSF54285	MoaD/ThiS
Shewana3_0277	SSF54690	Molybdopterin synthase subunit MoaE
Shewana3_0278	SSF53850	Periplasmic binding protein-like II
Shewana3_0279	SSF161098	MetI-like
Shewana3_0280	SSF50331	MOP-like
Shewana3_0280	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0282	SSF46894	C-terminal effector domain of the bipartite response regulators
Shewana3_0282	SSF52172	CheY-like
Shewana3_0283	SSF158472	HAMP domain-like
Shewana3_0283	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_0283	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_0284	SSF55120	Pseudouridine synthase
Shewana3_0286	SSF56935	Porins
Shewana3_0288	SSF51261	Duplicated hybrid motif
Shewana3_0290	SSF54001	Cysteine proteinases
Shewana3_0291	SSF56281	Metallo-hydrolase/oxidoreductase
Shewana3_0292	SSF46689	Homeodomain-like
Shewana3_0292	SSF48498	Tetracyclin repressor-like, C-terminal domain
Shewana3_0294	SSF140959	Indolic compounds 2,3-dioxygenase-like
Shewana3_0295	SSF53383	PLP-dependent transferases
Shewana3_0297	SSF118215	Proton glutamate symport protein
Shewana3_0299	SSF56935	Porins
Shewana3_0300	SSF54368	Glutamine synthetase, N-terminal domain
Shewana3_0300	SSF55931	Glutamine synthetase/guanido kinase
Shewana3_0301	SSF50447	Translation proteins
Shewana3_0301	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0301	SSF54980	EF-G C-terminal domain-like
Shewana3_0302	SSF46689	Homeodomain-like
Shewana3_0303	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_0304	SSF51182	RmlC-like cupins
Shewana3_0305	SSF50129	GroES-like
Shewana3_0305	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_0306	SSF48113	Heme-dependent peroxidases
Shewana3_0307	SSF54862	4Fe-4S ferredoxins
Shewana3_0308	SSF55073	Nucleotide cyclase
Shewana3_0312	SSF53474	alpha/beta-Hydrolases
Shewana3_0314	SSF69500	DTD-like
Shewana3_0315	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shewana3_0316	SSF52218	Flavoproteins
Shewana3_0318	SSF52821	Rhodanese/Cell cycle control phosphatase
Shewana3_0319	SSF47413	lambda repressor-like DNA-binding domains
Shewana3_0319	SSF51182	RmlC-like cupins
Shewana3_0321	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_0322	SSF51161	Trimeric LpxA-like enzymes
Shewana3_0326	SSF53901	Thiolase-like
Shewana3_0327	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_0328	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shewana3_0329	SSF53901	Thiolase-like
Shewana3_0331	SSF51905	FAD/NAD(P)-binding domain
Shewana3_0332	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shewana3_0333	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
Shewana3_0334	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shewana3_0335	SSF48557	L-aspartase-like
Shewana3_0336	SSF53448	Nucleotide-diphospho-sugar transferases
Shewana3_0337	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shewana3_0338	SSF56801	Acetyl-CoA synthetase-like
Shewana3_0340	SSF46689	Homeodomain-like
Shewana3_0341	SSF53098	Ribonuclease H-like
Shewana3_0343	SSF47336	ACP-like
Shewana3_0344	SSF47336	ACP-like
Shewana3_0345	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Shewana3_0348	SSF50249	Nucleic acid-binding proteins
Shewana3_0348	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0349	SSF53822	Periplasmic binding protein-like I
Shewana3_0350	SSF55073	Nucleotide cyclase
Shewana3_0350	SSF55781	GAF domain-like
Shewana3_0352	SSF53850	Periplasmic binding protein-like II
Shewana3_0353	SSF54631	CBS-domain pair
Shewana3_0353	SSF56176	FAD-binding/transporter-associated domain-like
Shewana3_0354	SSF46785	"Winged helix" DNA-binding domain
Shewana3_0354	SSF53850	Periplasmic binding protein-like II
Shewana3_0355	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Shewana3_0355	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_0356	SSF52467	DHS-like NAD/FAD-binding domain
Shewana3_0356	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Shewana3_0357	SSF55021	ACT-like
Shewana3_0358	SSF143975	IlvD/EDD N-terminal domain-like
Shewana3_0358	SSF52016	LeuD/IlvD-like
Shewana3_0359	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Shewana3_0359	SSF55021	ACT-like
Shewana3_0360	SSF53383	PLP-dependent transferases
Shewana3_0364	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
Shewana3_0371	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shewana3_0371	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shewana3_0371	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shewana3_0372	SSF111369	HlyD-like secretion proteins
Shewana3_0373	SSF46689	Homeodomain-like
Shewana3_0374	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0375	SSF141868	EAL domain-like
Shewana3_0375	SSF55073	Nucleotide cyclase
Shewana3_0375	SSF55781	GAF domain-like
Shewana3_0376	SSF141868	EAL domain-like
Shewana3_0376	SSF158472	HAMP domain-like
Shewana3_0376	SSF55073	Nucleotide cyclase
Shewana3_0378	SSF103088	OmpA-like
Shewana3_0379	SSF56954	Outer membrane efflux proteins (OEP)
Shewana3_0380	SSF111369	HlyD-like secretion proteins
Shewana3_0381	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0381	SSF90123	ABC transporter transmembrane region
Shewana3_0382	SSF51120	beta-Roll
Shewana3_0382	SSF53300	vWA-like
Shewana3_0383	SSF48452	TPR-like
Shewana3_0385	SSF69618	HemD-like
Shewana3_0386	SSF53850	Periplasmic binding protein-like II
Shewana3_0386	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
Shewana3_0388	SSF55387	Frataxin/Nqo15-like
Shewana3_0390	SSF50621	Alanine racemase C-terminal domain-like
Shewana3_0390	SSF51419	PLP-binding barrel
Shewana3_0391	SSF54506	Diaminopimelate epimerase-like
Shewana3_0393	SSF47823	lambda integrase-like, N-terminal domain
Shewana3_0393	SSF56349	DNA breaking-rejoining enzymes
Shewana3_0394	SSF56784	HAD-like
Shewana3_0398	SSF46689	Homeodomain-like
Shewana3_0399	SSF51395	FMN-linked oxidoreductases
Shewana3_0400	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_0401	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
Shewana3_0402	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
Shewana3_0403	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
Shewana3_0403	SSF51905	FAD/NAD(P)-binding domain
Shewana3_0403	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Shewana3_0404	SSF46548	alpha-helical ferredoxin
Shewana3_0404	SSF54292	2Fe-2S ferredoxin-like
Shewana3_0405	SSF54909	Dimeric alpha+beta barrel
Shewana3_0406	SSF50129	GroES-like
Shewana3_0406	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_0407	SSF46785	"Winged helix" DNA-binding domain
Shewana3_0407	SSF53850	Periplasmic binding protein-like II
Shewana3_0408	SSF50249	Nucleic acid-binding proteins
Shewana3_0408	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0408	SSF68912	Rho N-terminal domain-like
Shewana3_0409	SSF52833	Thioredoxin-like
Shewana3_0410	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0411	SSF53067	Actin-like ATPase domain
Shewana3_0412	SSF52833	Thioredoxin-like
Shewana3_0413	SSF55811	Nudix
Shewana3_0414	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Shewana3_0415	SSF160950	YacF-like
Shewana3_0416	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0419	SSF160246	EspE N-terminal domain-like
Shewana3_0419	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0421	SSF54523	Pili subunits
Shewana3_0422	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
Shewana3_0422	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
Shewana3_0423	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
Shewana3_0425	SSF46785	"Winged helix" DNA-binding domain
Shewana3_0425	SSF48008	GntR ligand-binding domain-like
Shewana3_0426	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Shewana3_0426	SSF52922	TK C-terminal domain-like
Shewana3_0427	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
Shewana3_0427	SSF51230	Single hybrid motif
Shewana3_0427	SSF52777	CoA-dependent acyltransferases
Shewana3_0428	SSF51905	FAD/NAD(P)-binding domain
Shewana3_0428	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Shewana3_0429	SSF141868	EAL domain-like
Shewana3_0429	SSF55073	Nucleotide cyclase
Shewana3_0429	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_0429	SSF63829	Calcium-dependent phosphotriesterase
Shewana3_0430	SSF52151	FabD/lysophospholipase-like
Shewana3_0431	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shewana3_0432	SSF56784	HAD-like
Shewana3_0433	SSF52016	LeuD/IlvD-like
Shewana3_0433	SSF53732	Aconitase iron-sulfur domain
Shewana3_0433	SSF74778	Aconitase B, N-terminal domain
Shewana3_0435	SSF51726	UROD/MetE-like
Shewana3_0436	SSF141868	EAL domain-like
Shewana3_0436	SSF55073	Nucleotide cyclase
Shewana3_0436	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_0437	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_0440	SSF51246	Rudiment single hybrid motif
Shewana3_0440	SSF52440	PreATP-grasp domain
Shewana3_0440	SSF56059	Glutathione synthetase ATP-binding domain-like
Shewana3_0441	SSF52335	Methylglyoxal synthase-like
Shewana3_0441	SSF53927	Cytidine deaminase-like
Shewana3_0442	SSF46955	Putative DNA-binding domain
Shewana3_0444	SSF117892	Band 7/SPFH domain
Shewana3_0448	SSF103473	MFS general substrate transporter
Shewana3_0449	SSF55073	Nucleotide cyclase
Shewana3_0449	SSF55781	GAF domain-like
Shewana3_0452	SSF52833	Thioredoxin-like
Shewana3_0453	SSF54534	FKBP-like
Shewana3_0454	SSF55073	Nucleotide cyclase
Shewana3_0454	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_0457	SSF53850	Periplasmic binding protein-like II
Shewana3_0459	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0463	SSF55811	Nudix
Shewana3_0468	SSF46894	C-terminal effector domain of the bipartite response regulators
Shewana3_0468	SSF52172	CheY-like
Shewana3_0469	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0472	SSF53098	Ribonuclease H-like
Shewana3_0474	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
Shewana3_0476	SSF52833	Thioredoxin-like
Shewana3_0479	SSF109604	HD-domain/PDEase-like
Shewana3_0479	SSF52172	CheY-like
Shewana3_0480	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Shewana3_0480	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_0480	SSF52172	CheY-like
Shewana3_0480	SSF53822	Periplasmic binding protein-like I
Shewana3_0480	SSF53850	Periplasmic binding protein-like II
Shewana3_0480	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_0480	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_0481	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_0481	SSF52172	CheY-like
Shewana3_0481	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_0482	SSF53474	alpha/beta-Hydrolases
Shewana3_0482	SSF82171	DPP6 N-terminal domain-like
Shewana3_0484	SSF47413	lambda repressor-like DNA-binding domains
Shewana3_0486	SSF52833	Thioredoxin-like
Shewana3_0489	SSF48695	Multiheme cytochromes
Shewana3_0490	SSF52821	Rhodanese/Cell cycle control phosphatase
Shewana3_0491	SSF54534	FKBP-like
Shewana3_0492	SSF48452	TPR-like
Shewana3_0493	SSF54862	4Fe-4S ferredoxins
Shewana3_0496	SSF51126	Pectin lyase-like
Shewana3_0497	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0499	SSF46894	C-terminal effector domain of the bipartite response regulators
Shewana3_0500	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shewana3_0502	SSF52025	PA domain
Shewana3_0502	SSF52743	Subtilisin-like
Shewana3_0503	SSF50475	FMN-binding split barrel
Shewana3_0505	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Shewana3_0505	SSF63380	Riboflavin synthase domain-like
Shewana3_0506	SSF143968	UbiD C-terminal domain-like
Shewana3_0506	SSF50475	FMN-binding split barrel
Shewana3_0508	SSF103473	MFS general substrate transporter
Shewana3_0509	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_0510	SSF51230	Single hybrid motif
Shewana3_0511	SSF52304	Type II 3-dehydroquinate dehydratase
Shewana3_0512	SSF75620	Release factor
Shewana3_0513	SSF52091	SpoIIaa-like
Shewana3_0516	SSF56954	Outer membrane efflux proteins (OEP)
Shewana3_0517	SSF111369	HlyD-like secretion proteins
Shewana3_0518	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shewana3_0518	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shewana3_0518	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shewana3_0519	SSF54909	Dimeric alpha+beta barrel
Shewana3_0520	SSF81330	Gated mechanosensitive channel
Shewana3_0521	SSF46785	"Winged helix" DNA-binding domain
Shewana3_0521	SSF53850	Periplasmic binding protein-like II
Shewana3_0522	SSF111369	HlyD-like secretion proteins
Shewana3_0523	SSF103473	MFS general substrate transporter
Shewana3_0524	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_0525	SSF54909	Dimeric alpha+beta barrel
Shewana3_0526	SSF46689	Homeodomain-like
Shewana3_0526	SSF52172	CheY-like
Shewana3_0526	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0528	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shewana3_0530	SSF46785	"Winged helix" DNA-binding domain
Shewana3_0530	SSF53850	Periplasmic binding protein-like II
Shewana3_0532	SSF46785	"Winged helix" DNA-binding domain
Shewana3_0534	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_0534	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Shewana3_0535	SSF103473	MFS general substrate transporter
Shewana3_0537	SSF56281	Metallo-hydrolase/oxidoreductase
Shewana3_0540	SSF103190	Sensory domain-like
Shewana3_0542	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_0542	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_0542	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_0543	SSF52172	CheY-like
Shewana3_0544	SSF141868	EAL domain-like
Shewana3_0544	SSF52172	CheY-like
Shewana3_0544	SSF55073	Nucleotide cyclase
Shewana3_0545	SSF56059	Glutathione synthetase ATP-binding domain-like
Shewana3_0546	SSF56935	Porins
Shewana3_0547	SSF47729	IHF-like DNA-binding proteins
Shewana3_0554	SSF141868	EAL domain-like
Shewana3_0554	SSF54631	CBS-domain pair
Shewana3_0554	SSF55073	Nucleotide cyclase
Shewana3_0557	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_0558	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shewana3_0559	SSF51430	NAD(P)-linked oxidoreductase
Shewana3_0560	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0561	SSF50182	Sm-like ribonucleoproteins
Shewana3_0561	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
Shewana3_0561	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
Shewana3_0565	SSF56935	Porins
Shewana3_0566	SSF53807	"Helical backbone" metal receptor
Shewana3_0567	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Shewana3_0568	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Shewana3_0569	SSF89946	Hypothetical protein VC0424
Shewana3_0570	SSF55073	Nucleotide cyclase
Shewana3_0570	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_0571	SSF103039	CheC-like
Shewana3_0571	SSF52172	CheY-like
Shewana3_0572	SSF52096	ClpP/crotonase
Shewana3_0574	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0575	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0575	SSF88723	PIN domain-like
Shewana3_0576	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_0576	SSF52172	CheY-like
Shewana3_0576	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_0576	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_0577	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shewana3_0578	SSF56112	Protein kinase-like (PK-like)
Shewana3_0580	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_0582	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_0582	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_0583	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_0583	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Shewana3_0585	SSF51695	PLC-like phosphodiesterases
Shewana3_0586	SSF50182	Sm-like ribonucleoproteins
Shewana3_0586	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
Shewana3_0586	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
Shewana3_0587	SSF103481	Multidrug resistance efflux transporter EmrE
Shewana3_0589	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0590	SSF53098	Ribonuclease H-like
Shewana3_0592	SSF53613	Ribokinase-like
Shewana3_0592	SSF64153	YjeF N-terminal domain-like
Shewana3_0593	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0594	SSF53187	Zn-dependent exopeptidases
Shewana3_0594	SSF54106	LysM domain
Shewana3_0595	SSF118116	DNA mismatch repair protein MutL
Shewana3_0595	SSF54211	Ribosomal protein S5 domain 2-like
Shewana3_0595	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_0596	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0597	SSF50182	Sm-like ribonucleoproteins
Shewana3_0598	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0598	SSF54980	EF-G C-terminal domain-like
Shewana3_0599	SSF117892	Band 7/SPFH domain
Shewana3_0600	SSF117892	Band 7/SPFH domain
Shewana3_0601	SSF50022	ISP domain
Shewana3_0602	SSF81342	Transmembrane di-heme cytochromes
Shewana3_0602	SSF81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Shewana3_0603	SSF46626	Cytochrome c
Shewana3_0604	SSF47616	GST C-terminal domain-like
Shewana3_0604	SSF52833	Thioredoxin-like
Shewana3_0605	SSF101738	SspB-like
Shewana3_0606	SSF52317	Class I glutamine amidotransferase-like
Shewana3_0607	SSF53474	alpha/beta-Hydrolases
Shewana3_0607	SSF82171	DPP6 N-terminal domain-like
Shewana3_0608	SSF109604	HD-domain/PDEase-like
Shewana3_0609	SSF53474	alpha/beta-Hydrolases
Shewana3_0610	SSF53383	PLP-dependent transferases
Shewana3_0611	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_0612	SSF53720	ALDH-like
Shewana3_0614	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_0614	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_0615	SSF46894	C-terminal effector domain of the bipartite response regulators
Shewana3_0615	SSF52172	CheY-like
Shewana3_0617	SSF46785	"Winged helix" DNA-binding domain
Shewana3_0617	SSF51206	cAMP-binding domain-like
Shewana3_0618	SSF81901	HCP-like
Shewana3_0619	SSF55144	LigT-like
Shewana3_0620	SSF141868	EAL domain-like
Shewana3_0620	SSF55073	Nucleotide cyclase
Shewana3_0620	SSF55781	GAF domain-like
Shewana3_0621	SSF56935	Porins
Shewana3_0622	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0623	SSF53955	Lysozyme-like
Shewana3_0623	SSF56601	beta-lactamase/transpeptidase-like
Shewana3_0624	SSF54534	FKBP-like
Shewana3_0626	SSF52467	DHS-like NAD/FAD-binding domain
Shewana3_0632	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_0632	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_0633	SSF50692	ADC-like
Shewana3_0633	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shewana3_0635	SSF54862	4Fe-4S ferredoxins
Shewana3_0636	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_0636	SSF53850	Periplasmic binding protein-like II
Shewana3_0636	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_0637	SSF52172	CheY-like
Shewana3_0641	SSF56726	DNA topoisomerase IV, alpha subunit
Shewana3_0642	SSF118215	Proton glutamate symport protein
Shewana3_0647	SSF75689	Zinc-binding domain of translation initiation factor 2 beta
Shewana3_0648	SSF56655	Carbohydrate phosphatase
Shewana3_0649	SSF53474	alpha/beta-Hydrolases
Shewana3_0649	SSF82171	DPP6 N-terminal domain-like
Shewana3_0650	SSF46894	C-terminal effector domain of the bipartite response regulators
Shewana3_0650	SSF52172	CheY-like
Shewana3_0652	SSF53633	Carbamate kinase-like
Shewana3_0652	SSF55021	ACT-like
Shewana3_0653	SSF53187	Zn-dependent exopeptidases
Shewana3_0654	SSF143865	CorA soluble domain-like
Shewana3_0654	SSF144083	Magnesium transport protein CorA, transmembrane region
Shewana3_0656	SSF46894	C-terminal effector domain of the bipartite response regulators
Shewana3_0656	SSF52172	CheY-like
Shewana3_0657	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_0658	SSF48695	Multiheme cytochromes
Shewana3_0659	SSF141868	EAL domain-like
Shewana3_0659	SSF55073	Nucleotide cyclase
Shewana3_0659	SSF55781	GAF domain-like
Shewana3_0660	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
Shewana3_0663	SSF56112	Protein kinase-like (PK-like)
Shewana3_0664	SSF46689	Homeodomain-like
Shewana3_0665	SSF103088	OmpA-like
Shewana3_0666	SSF53850	Periplasmic binding protein-like II
Shewana3_0667	SSF158791	MgtE N-terminal domain-like
Shewana3_0667	SSF161093	MgtE membrane domain-like
Shewana3_0667	SSF54631	CBS-domain pair
Shewana3_0668	SSF55594	HPr-like
Shewana3_0669	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0670	SSF55804	Phoshotransferase/anion transport protein
Shewana3_0671	SSF69754	Ribosome binding protein Y (YfiA homologue)
Shewana3_0673	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0676	SSF56784	HAD-like
Shewana3_0677	SSF53697	SIS domain
Shewana3_0678	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0682	SSF52091	SpoIIaa-like
Shewana3_0683	SSF82657	BolA-like
Shewana3_0684	SSF55205	EPT/RTPC-like
Shewana3_0685	SSF46689	Homeodomain-like
Shewana3_0685	SSF48498	Tetracyclin repressor-like, C-terminal domain
Shewana3_0686	SSF53474	alpha/beta-Hydrolases
Shewana3_0688	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shewana3_0689	SSF50156	PDZ domain-like
Shewana3_0689	SSF50494	Trypsin-like serine proteases
Shewana3_0690	SSF50156	PDZ domain-like
Shewana3_0690	SSF50494	Trypsin-like serine proteases
Shewana3_0691	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0692	SSF52161	Ribosomal protein L13
Shewana3_0693	SSF54211	Ribosomal protein S5 domain 2-like
Shewana3_0695	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0696	SSF81901	HCP-like
Shewana3_0697	SSF50249	Nucleic acid-binding proteins
Shewana3_0698	SSF55315	L30e-like
Shewana3_0698	SSF75217	alpha/beta knot
Shewana3_0699	SSF103473	MFS general substrate transporter
Shewana3_0701	SSF54995	Ribosomal protein S6
Shewana3_0702	SSF50249	Nucleic acid-binding proteins
Shewana3_0703	SSF46911	Ribosomal protein S18
Shewana3_0704	SSF55653	Ribosomal protein L9 C-domain
Shewana3_0704	SSF55658	L9 N-domain-like
Shewana3_0705	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0706	SSF102114	Radical SAM enzymes
Shewana3_0708	SSF102114	Radical SAM enzymes
Shewana3_0709	SSF81342	Transmembrane di-heme cytochromes
Shewana3_0710	SSF48674	Fe-only hydrogenase smaller subunit
Shewana3_0711	SSF53920	Fe-only hydrogenase
Shewana3_0711	SSF54862	4Fe-4S ferredoxins
Shewana3_0712	SSF50494	Trypsin-like serine proteases
Shewana3_0713	SSF48024	N-terminal domain of DnaB helicase
Shewana3_0713	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0714	SSF50621	Alanine racemase C-terminal domain-like
Shewana3_0714	SSF51419	PLP-binding barrel
Shewana3_0715	SSF103039	CheC-like
Shewana3_0716	SSF56935	Porins
Shewana3_0717	SSF51197	Clavaminate synthase-like
Shewana3_0718	SSF51395	FMN-linked oxidoreductases
Shewana3_0721	SSF52096	ClpP/crotonase
Shewana3_0722	SSF110087	DR1885-like metal-binding protein
Shewana3_0725	SSF56954	Outer membrane efflux proteins (OEP)
Shewana3_0726	SSF55811	Nudix
Shewana3_0728	SSF56300	Metallo-dependent phosphatases
Shewana3_0729	SSF53474	alpha/beta-Hydrolases
Shewana3_0730	SSF54211	Ribosomal protein S5 domain 2-like
Shewana3_0730	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_0730	SSF56719	Type II DNA topoisomerase
Shewana3_0731	SSF50952	Soluble quinoprotein glucose dehydrogenase
Shewana3_0732	SSF101904	GyrA/ParC C-terminal domain-like
Shewana3_0732	SSF56719	Type II DNA topoisomerase
Shewana3_0733	SSF56935	Porins
Shewana3_0734	SSF56935	Porins
Shewana3_0735	SSF69572	Activating enzymes of the ubiquitin-like proteins
Shewana3_0736	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_0736	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_0739	SSF47188	Hemerythrin-like
Shewana3_0739	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_0740	SSF160113	YegP-like
Shewana3_0741	SSF50331	MOP-like
Shewana3_0741	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0742	SSF161098	MetI-like
Shewana3_0743	SSF53850	Periplasmic binding protein-like II
Shewana3_0744	SSF46785	"Winged helix" DNA-binding domain
Shewana3_0744	SSF50331	MOP-like
Shewana3_0745	SSF46548	alpha-helical ferredoxin
Shewana3_0746	SSF53850	Periplasmic binding protein-like II
Shewana3_0747	SSF48452	TPR-like
Shewana3_0747	SSF55073	Nucleotide cyclase
Shewana3_0748	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
Shewana3_0749	SSF158675	Sama2622-like
Shewana3_0750	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_0750	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Shewana3_0754	SSF56935	Porins
Shewana3_0755	SSF47616	GST C-terminal domain-like
Shewana3_0755	SSF52833	Thioredoxin-like
Shewana3_0756	SSF47413	lambda repressor-like DNA-binding domains
Shewana3_0757	SSF160631	SMI1/KNR4-like
Shewana3_0758	SSF81301	Nucleotidyltransferase
Shewana3_0759	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shewana3_0760	SSF55120	Pseudouridine synthase
Shewana3_0760	SSF55174	Alpha-L RNA-binding motif
Shewana3_0763	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Shewana3_0763	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Shewana3_0764	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_0765	SSF53271	PRTase-like
Shewana3_0766	SSF54211	Ribosomal protein S5 domain 2-like
Shewana3_0766	SSF55060	GHMP Kinase, C-terminal domain
Shewana3_0767	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
Shewana3_0768	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_0768	SSF69075	Glutamyl tRNA-reductase dimerization domain
Shewana3_0768	SSF69742	Glutamyl tRNA-reductase catalytic, N-terminal domain
Shewana3_0769	SSF75620	Release factor
Shewana3_0770	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_0771	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_0773	SSF48452	TPR-like
Shewana3_0775	SSF51569	Aldolase
Shewana3_0776	SSF103481	Multidrug resistance efflux transporter EmrE
Shewana3_0777	SSF141868	EAL domain-like
Shewana3_0778	SSF111352	Ammonium transporter
Shewana3_0779	SSF54913	GlnB-like
Shewana3_0780	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Shewana3_0780	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_0782	SSF89963	YajQ-like
Shewana3_0783	SSF103473	MFS general substrate transporter
Shewana3_0785	SSF50891	Cyclophilin-like
Shewana3_0787	SSF56925	OMPA-like
Shewana3_0791	SSF51984	MurCD N-terminal domain
Shewana3_0791	SSF53244	MurD-like peptide ligases, peptide-binding domain
Shewana3_0791	SSF53623	MurD-like peptide ligases, catalytic domain
Shewana3_0792	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Shewana3_0793	SSF53271	PRTase-like
Shewana3_0794	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0797	SSF52025	PA domain
Shewana3_0797	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shewana3_0798	SSF46785	"Winged helix" DNA-binding domain
Shewana3_0798	SSF54909	Dimeric alpha+beta barrel
Shewana3_0799	SSF55120	Pseudouridine synthase
Shewana3_0801	SSF50729	PH domain-like
Shewana3_0803	SSF82185	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
Shewana3_0804	SSF51182	RmlC-like cupins
Shewana3_0805	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0806	SSF51556	Metallo-dependent hydrolases
Shewana3_0807	SSF82649	SufE/NifU
Shewana3_0808	SSF53383	PLP-dependent transferases
Shewana3_0809	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_0810	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0812	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0812	SSF90123	ABC transporter transmembrane region
Shewana3_0813	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0813	SSF90123	ABC transporter transmembrane region
Shewana3_0814	SSF55154	CYTH-like phosphatases
Shewana3_0815	SSF53098	Ribonuclease H-like
Shewana3_0816	SSF46955	Putative DNA-binding domain
Shewana3_0819	SSF51730	FAD-linked oxidoreductase
Shewana3_0819	SSF53720	ALDH-like
Shewana3_0819	SSF81935	N-terminal domain of bifunctional PutA protein
Shewana3_0822	SSF109755	PhoU-like
Shewana3_0823	SSF55154	CYTH-like phosphatases
Shewana3_0824	SSF81324	Voltage-gated potassium channels
Shewana3_0829	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_0832	SSF81301	Nucleotidyltransferase
Shewana3_0832	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
Shewana3_0833	SSF55073	Nucleotide cyclase
Shewana3_0833	SSF55781	GAF domain-like
Shewana3_0835	SSF46785	"Winged helix" DNA-binding domain
Shewana3_0835	SSF53850	Periplasmic binding protein-like II
Shewana3_0837	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_0838	SSF46955	Putative DNA-binding domain
Shewana3_0839	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0841	SSF63411	LuxS/MPP-like metallohydrolase
Shewana3_0842	SSF63411	LuxS/MPP-like metallohydrolase
Shewana3_0843	SSF53187	Zn-dependent exopeptidases
Shewana3_0844	SSF141523	L,D-transpeptidase catalytic domain-like
Shewana3_0845	SSF46689	Homeodomain-like
Shewana3_0845	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0845	SSF55781	GAF domain-like
Shewana3_0846	SSF81442	Cytochrome c oxidase subunit I-like
Shewana3_0847	SSF116726	TrkA C-terminal domain-like
Shewana3_0847	SSF56176	FAD-binding/transporter-associated domain-like
Shewana3_0849	SSF52374	Nucleotidylyl transferase
Shewana3_0849	SSF53613	Ribokinase-like
Shewana3_0851	SSF46689	Homeodomain-like
Shewana3_0853	SSF52467	DHS-like NAD/FAD-binding domain
Shewana3_0854	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_0854	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Shewana3_0855	SSF52218	Flavoproteins
Shewana3_0855	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Shewana3_0855	SSF63380	Riboflavin synthase domain-like
Shewana3_0856	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
Shewana3_0856	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
Shewana3_0857	SSF52402	Adenine nucleotide alpha hydrolases-like
Shewana3_0858	SSF53955	Lysozyme-like
Shewana3_0860	SSF52096	ClpP/crotonase
Shewana3_0861	SSF56931	Outer membrane phospholipase A (OMPLA)
Shewana3_0862	SSF53790	Tetrapyrrole methylase
Shewana3_0863	SSF52402	Adenine nucleotide alpha hydrolases-like
Shewana3_0864	SSF50447	Translation proteins
Shewana3_0864	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Shewana3_0864	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0865	SSF116726	TrkA C-terminal domain-like
Shewana3_0866	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0867	SSF103190	Sensory domain-like
Shewana3_0867	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_0868	SSF141868	EAL domain-like
Shewana3_0868	SSF52172	CheY-like
Shewana3_0868	SSF55073	Nucleotide cyclase
Shewana3_0870	SSF103473	MFS general substrate transporter
Shewana3_0871	SSF52218	Flavoproteins
Shewana3_0872	SSF81342	Transmembrane di-heme cytochromes
Shewana3_0874	SSF52833	Thioredoxin-like
Shewana3_0875	SSF46565	Chaperone J-domain
Shewana3_0876	SSF55469	FMN-dependent nitroreductase-like
Shewana3_0877	SSF53822	Periplasmic binding protein-like I
Shewana3_0880	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0881	SSF161098	MetI-like
Shewana3_0882	SSF53850	Periplasmic binding protein-like II
Shewana3_0884	SSF46785	"Winged helix" DNA-binding domain
Shewana3_0884	SSF53850	Periplasmic binding protein-like II
Shewana3_0887	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_0889	SSF74650	Galactose mutarotase-like
Shewana3_0889	SSF81296	E set domains
Shewana3_0890	SSF52317	Class I glutamine amidotransferase-like
Shewana3_0891	SSF46689	Homeodomain-like
Shewana3_0891	SSF51182	RmlC-like cupins
Shewana3_0893	SSF117396	TM1631-like
Shewana3_0894	SSF55073	Nucleotide cyclase
Shewana3_0894	SSF55781	GAF domain-like
Shewana3_0894	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_0895	SSF103190	Sensory domain-like
Shewana3_0895	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_0897	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shewana3_0897	SSF63737	Leukotriene A4 hydrolase N-terminal domain
Shewana3_0899	SSF48452	TPR-like
Shewana3_0900	SSF56420	Peptide deformylase
Shewana3_0902	SSF50998	Quinoprotein alcohol dehydrogenase-like
Shewana3_0903	SSF54534	FKBP-like
Shewana3_0904	SSF56219	DNase I-like
Shewana3_0904	SSF74853	Lamin A/C globular tail domain
Shewana3_0906	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shewana3_0908	SSF56634	Heme-dependent catalase-like
Shewana3_0913	SSF50494	Trypsin-like serine proteases
Shewana3_0915	SSF103088	OmpA-like
Shewana3_0916	SSF55120	Pseudouridine synthase
Shewana3_0916	SSF55174	Alpha-L RNA-binding motif
Shewana3_0921	SSF143631	ApbE-like
Shewana3_0923	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_0924	SSF103481	Multidrug resistance efflux transporter EmrE
Shewana3_0925	SSF46689	Homeodomain-like
Shewana3_0925	SSF51182	RmlC-like cupins
Shewana3_0926	SSF54534	FKBP-like
Shewana3_0929	SSF46785	"Winged helix" DNA-binding domain
Shewana3_0929	SSF53383	PLP-dependent transferases
Shewana3_0930	SSF53383	PLP-dependent transferases
Shewana3_0932	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_0933	SSF51197	Clavaminate synthase-like
Shewana3_0934	SSF82657	BolA-like
Shewana3_0935	SSF53850	Periplasmic binding protein-like II
Shewana3_0936	SSF63411	LuxS/MPP-like metallohydrolase
Shewana3_0937	SSF56935	Porins
Shewana3_0943	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Shewana3_0943	SSF54292	2Fe-2S ferredoxin-like
Shewana3_0943	SSF63380	Riboflavin synthase domain-like
Shewana3_0944	SSF143631	ApbE-like
Shewana3_0946	SSF47240	Ferritin-like
Shewana3_0947	SSF47240	Ferritin-like
Shewana3_0948	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_0949	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
Shewana3_0949	SSF56672	DNA/RNA polymerases
Shewana3_0950	SSF53187	Zn-dependent exopeptidases
Shewana3_0951	SSF53187	Zn-dependent exopeptidases
Shewana3_0952	SSF56935	Porins
Shewana3_0954	SSF53633	Carbamate kinase-like
Shewana3_0954	SSF88697	PUA domain-like
Shewana3_0955	SSF53720	ALDH-like
Shewana3_0957	SSF55826	YbaK/ProRS associated domain
Shewana3_0958	SSF103481	Multidrug resistance efflux transporter EmrE
Shewana3_0959	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
Shewana3_0959	SSF53067	Actin-like ATPase domain
Shewana3_0960	SSF46565	Chaperone J-domain
Shewana3_0960	SSF49493	HSP40/DnaJ peptide-binding domain
Shewana3_0960	SSF57938	DnaJ/Hsp40 cysteine-rich domain
Shewana3_0962	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_0963	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_0965	SSF54534	FKBP-like
Shewana3_0966	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_0966	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Shewana3_0967	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
Shewana3_0967	SSF52317	Class I glutamine amidotransferase-like
Shewana3_0968	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
Shewana3_0968	SSF52335	Methylglyoxal synthase-like
Shewana3_0968	SSF52440	PreATP-grasp domain
Shewana3_0968	SSF56059	Glutathione synthetase ATP-binding domain-like
Shewana3_0969	SSF53850	Periplasmic binding protein-like II
Shewana3_0970	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_0971	SSF158791	MgtE N-terminal domain-like
Shewana3_0971	SSF161093	MgtE membrane domain-like
Shewana3_0971	SSF54631	CBS-domain pair
Shewana3_0973	SSF56219	DNase I-like
Shewana3_0975	SSF51658	Xylose isomerase-like
Shewana3_0977	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_0977	SSF88697	PUA domain-like
Shewana3_0978	SSF100950	NagB/RpiA/CoA transferase-like
Shewana3_0978	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
Shewana3_0980	SSF53098	Ribonuclease H-like
Shewana3_0983	SSF56935	Porins
Shewana3_0985	SSF47240	Ferritin-like
Shewana3_0986	SSF102220	DNA polymerase III psi subunit
Shewana3_0987	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_0988	SSF102114	Radical SAM enzymes
Shewana3_0989	SSF55681	Class II aaRS and biotin synthetases
Shewana3_0990	SSF117991	YbeD/HP0495-like
Shewana3_0991	SSF56601	beta-lactamase/transpeptidase-like
Shewana3_0991	SSF69189	Penicillin-binding protein associated domain
Shewana3_0992	SSF110997	Sporulation related repeat
Shewana3_0992	SSF50685	Barwin-like endoglucanases
Shewana3_0993	SSF53955	Lysozyme-like
Shewana3_0995	SSF56519	Penicillin binding protein dimerisation domain
Shewana3_0995	SSF56601	beta-lactamase/transpeptidase-like
Shewana3_0996	SSF75217	alpha/beta knot
Shewana3_0997	SSF81301	Nucleotidyltransferase
Shewana3_0998	SSF52374	Nucleotidylyl transferase
Shewana3_0999	SSF48019	post-AAA+ oligomerization domain-like
Shewana3_0999	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1001	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Shewana3_1001	SSF50677	ValRS/IleRS/LeuRS editing domain
Shewana3_1001	SSF52374	Nucleotidylyl transferase
Shewana3_1003	SSF54523	Pili subunits
Shewana3_1004	SSF56317	Carbon-nitrogen hydrolase
Shewana3_1005	SSF54631	CBS-domain pair
Shewana3_1005	SSF56176	FAD-binding/transporter-associated domain-like
Shewana3_1006	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shewana3_1007	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1008	SSF102114	Radical SAM enzymes
Shewana3_1010	SSF51905	FAD/NAD(P)-binding domain
Shewana3_1011	SSF53178	Peptidyl-tRNA hydrolase-like
Shewana3_1012	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1012	SSF81271	TGS-like
Shewana3_1017	SSF46557	GreA transcript cleavage protein, N-terminal domain
Shewana3_1017	SSF54534	FKBP-like
Shewana3_1019	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shewana3_1020	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shewana3_1021	SSF75471	YhbY-like
Shewana3_1022	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_1023	SSF140990	FtsH protease domain-like
Shewana3_1023	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1024	SSF51717	Dihydropteroate synthetase-like
Shewana3_1025	SSF53738	Phosphoglucomutase, first 3 domains
Shewana3_1025	SSF55957	Phosphoglucomutase, C-terminal domain
Shewana3_1026	SSF51351	Triosephosphate isomerase (TIM)
Shewana3_1028	SSF74942	YhbC-like, C-terminal domain
Shewana3_1028	SSF75420	YhbC-like, N-terminal domain
Shewana3_1029	SSF47794	Rad51 N-terminal domain-like
Shewana3_1029	SSF50249	Nucleic acid-binding proteins
Shewana3_1029	SSF54814	Prokaryotic type KH domain (KH-domain type II)
Shewana3_1029	SSF69705	Transcription factor NusA, N-terminal domain
Shewana3_1030	SSF46955	Putative DNA-binding domain
Shewana3_1030	SSF50447	Translation proteins
Shewana3_1030	SSF52156	Initiation factor IF2/eIF5b, domain 3
Shewana3_1030	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1031	SSF89919	Ribosome-binding factor A, RbfA
Shewana3_1032	SSF55120	Pseudouridine synthase
Shewana3_1032	SSF88697	PUA domain-like
Shewana3_1034	SSF141868	EAL domain-like
Shewana3_1034	SSF55073	Nucleotide cyclase
Shewana3_1035	SSF46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
Shewana3_1035	SSF50249	Nucleic acid-binding proteins
Shewana3_1035	SSF54211	Ribosomal protein S5 domain 2-like
Shewana3_1035	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
Shewana3_1035	SSF55666	Ribonuclease PH domain 2-like
Shewana3_1036	SSF48452	TPR-like
Shewana3_1037	SSF50447	Translation proteins
Shewana3_1037	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1037	SSF54980	EF-G C-terminal domain-like
Shewana3_1038	SSF51556	Metallo-dependent hydrolases
Shewana3_1040	SSF111364	Tsx-like channel
Shewana3_1041	SSF51569	Aldolase
Shewana3_1042	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Shewana3_1042	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Shewana3_1042	SSF54680	Pyrimidine nucleoside phosphorylase C-terminal domain
Shewana3_1043	SSF143856	DeoB insert domain-like
Shewana3_1043	SSF53649	Alkaline phosphatase-like
Shewana3_1044	SSF53167	Purine and uridine phosphorylases
Shewana3_1046	SSF56784	HAD-like
Shewana3_1047	SSF53474	alpha/beta-Hydrolases
Shewana3_1048	SSF141371	PilZ domain-like
Shewana3_1049	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1049	SSF54211	Ribosomal protein S5 domain 2-like
Shewana3_1050	SSF141371	PilZ domain-like
Shewana3_1051	SSF52172	CheY-like
Shewana3_1052	SSF53822	Periplasmic binding protein-like I
Shewana3_1053	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Shewana3_1053	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_1053	SSF52172	CheY-like
Shewana3_1053	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_1054	SSF89155	TorD-like
Shewana3_1055	SSF50692	ADC-like
Shewana3_1055	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shewana3_1056	SSF48695	Multiheme cytochromes
Shewana3_1059	SSF54631	CBS-domain pair
Shewana3_1060	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_1060	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Shewana3_1061	SSF56300	Metallo-dependent phosphatases
Shewana3_1066	SSF55718	SCP-like
Shewana3_1067	SSF54862	4Fe-4S ferredoxins
Shewana3_1069	SSF109604	HD-domain/PDEase-like
Shewana3_1070	SSF141868	EAL domain-like
Shewana3_1070	SSF55073	Nucleotide cyclase
Shewana3_1071	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shewana3_1072	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1073	SSF46785	"Winged helix" DNA-binding domain
Shewana3_1073	SSF53850	Periplasmic binding protein-like II
Shewana3_1074	SSF53850	Periplasmic binding protein-like II
Shewana3_1075	SSF82784	OsmC-like
Shewana3_1076	SSF46689	Homeodomain-like
Shewana3_1076	SSF48498	Tetracyclin repressor-like, C-terminal domain
Shewana3_1077	SSF111369	HlyD-like secretion proteins
Shewana3_1078	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shewana3_1078	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shewana3_1078	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shewana3_1079	SSF109604	HD-domain/PDEase-like
Shewana3_1081	SSF46689	Homeodomain-like
Shewana3_1081	SSF51182	RmlC-like cupins
Shewana3_1082	SSF103473	MFS general substrate transporter
Shewana3_1083	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shewana3_1083	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shewana3_1083	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shewana3_1084	SSF111369	HlyD-like secretion proteins
Shewana3_1085	SSF53850	Periplasmic binding protein-like II
Shewana3_1086	SSF56300	Metallo-dependent phosphatases
Shewana3_1087	SSF50998	Quinoprotein alcohol dehydrogenase-like
Shewana3_1087	SSF53300	vWA-like
Shewana3_1089	SSF52833	Thioredoxin-like
Shewana3_1090	SSF56281	Metallo-hydrolase/oxidoreductase
Shewana3_1091	SSF46785	"Winged helix" DNA-binding domain
Shewana3_1091	SSF53850	Periplasmic binding protein-like II
Shewana3_1093	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1094	SSF53383	PLP-dependent transferases
Shewana3_1096	SSF53597	Dihydrofolate reductase-like
Shewana3_1096	SSF53927	Cytidine deaminase-like
Shewana3_1097	SSF63380	Riboflavin synthase domain-like
Shewana3_1098	SSF142695	RibA-like
Shewana3_1098	SSF55821	YrdC/RibB
Shewana3_1099	SSF52121	Lumazine synthase
Shewana3_1100	SSF48013	NusB-like
Shewana3_1101	SSF55326	PurM N-terminal domain-like
Shewana3_1101	SSF56042	PurM C-terminal domain-like
Shewana3_1102	SSF101307	YutG-like
Shewana3_1103	SSF52402	Adenine nucleotide alpha hydrolases-like
Shewana3_1104	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1106	SSF46785	"Winged helix" DNA-binding domain
Shewana3_1106	SSF53850	Periplasmic binding protein-like II
Shewana3_1109	SSF158472	HAMP domain-like
Shewana3_1109	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Shewana3_1109	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_1109	SSF52172	CheY-like
Shewana3_1109	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_1110	SSF50249	Nucleic acid-binding proteins
Shewana3_1110	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_1111	SSF109604	HD-domain/PDEase-like
Shewana3_1111	SSF55021	ACT-like
Shewana3_1111	SSF81271	TGS-like
Shewana3_1111	SSF81301	Nucleotidyltransferase
Shewana3_1114	SSF101386	all-alpha NTP pyrophosphatases
Shewana3_1115	SSF52317	Class I glutamine amidotransferase-like
Shewana3_1115	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1116	SSF51604	Enolase C-terminal domain-like
Shewana3_1116	SSF54826	Enolase N-terminal domain-like
Shewana3_1118	SSF53448	Nucleotide-diphospho-sugar transferases
Shewana3_1119	SSF69765	IpsF-like
Shewana3_1120	SSF55120	Pseudouridine synthase
Shewana3_1121	SSF64167	SurE-like
Shewana3_1122	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_1123	SSF51261	Duplicated hybrid motif
Shewana3_1124	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Shewana3_1124	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Shewana3_1125	SSF48334	DNA repair protein MutS, domain III
Shewana3_1125	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1125	SSF53150	DNA repair protein MutS, domain II
Shewana3_1125	SSF55271	DNA repair protein MutS, domain I
Shewana3_1126	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1126	SSF54752	RecA protein, C-terminal domain
Shewana3_1128	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
Shewana3_1128	SSF50447	Translation proteins
Shewana3_1128	SSF55186	ThrRS/AlaRS common domain
Shewana3_1128	SSF55681	Class II aaRS and biotin synthetases
Shewana3_1129	SSF53633	Carbamate kinase-like
Shewana3_1129	SSF55021	ACT-like
Shewana3_1130	SSF117130	CsrA-like
Shewana3_1131	SSF46589	tRNA-binding arm
Shewana3_1131	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Shewana3_1131	SSF50677	ValRS/IleRS/LeuRS editing domain
Shewana3_1131	SSF52374	Nucleotidylyl transferase
Shewana3_1132	SSF102400	DNA polymerase III chi subunit
Shewana3_1133	SSF69754	Ribosome binding protein Y (YfiA homologue)
Shewana3_1134	SSF81342	Transmembrane di-heme cytochromes
Shewana3_1135	SSF47175	Cytochromes
Shewana3_1136	SSF48295	TrpR-like
Shewana3_1138	SSF54534	FKBP-like
Shewana3_1139	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_1139	SSF53633	Carbamate kinase-like
Shewana3_1139	SSF55021	ACT-like
Shewana3_1139	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Shewana3_1140	SSF54211	Ribosomal protein S5 domain 2-like
Shewana3_1140	SSF55060	GHMP Kinase, C-terminal domain
Shewana3_1141	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Shewana3_1143	SSF53850	Periplasmic binding protein-like II
Shewana3_1144	SSF50156	PDZ domain-like
Shewana3_1144	SSF52096	ClpP/crotonase
Shewana3_1144	SSF69304	Tricorn protease N-terminal domain
Shewana3_1144	SSF69322	Tricorn protease domain 2
Shewana3_1146	SSF82784	OsmC-like
Shewana3_1150	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_1150	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_1151	SSF69754	Ribosome binding protein Y (YfiA homologue)
Shewana3_1152	SSF46894	C-terminal effector domain of the bipartite response regulators
Shewana3_1152	SSF52172	CheY-like
Shewana3_1153	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_1154	SSF52499	Isochorismatase-like hydrolases
Shewana3_1155	SSF75625	YebC-like
Shewana3_1156	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_1158	SSF46689	Homeodomain-like
Shewana3_1158	SSF48498	Tetracyclin repressor-like, C-terminal domain
Shewana3_1159	SSF51395	FMN-linked oxidoreductases
Shewana3_1160	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1160	SSF54211	Ribosomal protein S5 domain 2-like
Shewana3_1161	SSF141868	EAL domain-like
Shewana3_1161	SSF55073	Nucleotide cyclase
Shewana3_1161	SSF55781	GAF domain-like
Shewana3_1161	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_1162	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1165	SSF46955	Putative DNA-binding domain
Shewana3_1166	SSF48173	Cryptochrome/photolyase FAD-binding domain
Shewana3_1166	SSF52425	Cryptochrome/photolyase, N-terminal domain
Shewana3_1167	SSF54427	NTF2-like
Shewana3_1168	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_1169	SSF51905	FAD/NAD(P)-binding domain
Shewana3_1171	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_1178	SSF81342	Transmembrane di-heme cytochromes
Shewana3_1179	SSF101874	YceI-like
Shewana3_1180	SSF111148	YggX-like
Shewana3_1181	SSF48150	DNA-glycosylase
Shewana3_1181	SSF55811	Nudix
Shewana3_1182	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_1184	SSF56601	beta-lactamase/transpeptidase-like
Shewana3_1186	SSF46785	"Winged helix" DNA-binding domain
Shewana3_1186	SSF53850	Periplasmic binding protein-like II
Shewana3_1188	SSF102114	Radical SAM enzymes
Shewana3_1189	SSF52972	ITPase-like
Shewana3_1191	SSF69786	YggU-like
Shewana3_1193	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Shewana3_1193	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_1194	SSF51419	PLP-binding barrel
Shewana3_1195	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1196	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1197	SSF52833	Thioredoxin-like
Shewana3_1198	SSF53800	Chelatase
Shewana3_1199	SSF53098	Ribonuclease H-like
Shewana3_1200	SSF143456	VC0467-like
Shewana3_1201	SSF55159	eIF1-like
Shewana3_1205	SSF52833	Thioredoxin-like
Shewana3_1206	SSF50182	Sm-like ribonucleoproteins
Shewana3_1206	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
Shewana3_1206	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
Shewana3_1207	SSF103088	OmpA-like
Shewana3_1207	SSF103647	TSP type-3 repeat
Shewana3_1208	SSF53383	PLP-dependent transferases
Shewana3_1209	SSF109604	HD-domain/PDEase-like
Shewana3_1209	SSF55781	GAF domain-like
Shewana3_1210	SSF54427	NTF2-like
Shewana3_1211	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shewana3_1212	SSF55073	Nucleotide cyclase
Shewana3_1213	SSF53850	Periplasmic binding protein-like II
Shewana3_1215	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1216	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_1219	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_1220	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_1221	SSF51182	RmlC-like cupins
Shewana3_1223	SSF46785	"Winged helix" DNA-binding domain
Shewana3_1223	SSF53850	Periplasmic binding protein-like II
Shewana3_1224	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
Shewana3_1224	SSF56300	Metallo-dependent phosphatases
Shewana3_1225	SSF54631	CBS-domain pair
Shewana3_1226	SSF102114	Radical SAM enzymes
Shewana3_1227	SSF48452	TPR-like
Shewana3_1229	SSF51717	Dihydropteroate synthetase-like
Shewana3_1229	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
Shewana3_1230	SSF52954	Class II aaRS ABD-related
Shewana3_1230	SSF55681	Class II aaRS and biotin synthetases
Shewana3_1231	SSF48452	TPR-like
Shewana3_1232	SSF50998	Quinoprotein alcohol dehydrogenase-like
Shewana3_1233	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1235	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
Shewana3_1235	SSF54631	CBS-domain pair
Shewana3_1236	SSF52317	Class I glutamine amidotransferase-like
Shewana3_1236	SSF52402	Adenine nucleotide alpha hydrolases-like
Shewana3_1236	SSF54810	GMP synthetase C-terminal dimerisation domain
Shewana3_1237	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1238	SSF53927	Cytidine deaminase-like
Shewana3_1239	SSF53850	Periplasmic binding protein-like II
Shewana3_1239	SSF53955	Lysozyme-like
Shewana3_1240	SSF109736	FGAM synthase PurL, linker domain
Shewana3_1240	SSF52317	Class I glutamine amidotransferase-like
Shewana3_1240	SSF55326	PurM N-terminal domain-like
Shewana3_1240	SSF56042	PurM C-terminal domain-like
Shewana3_1240	SSF82697	PurS-like
Shewana3_1244	SSF56349	DNA breaking-rejoining enzymes
Shewana3_1246	SSF47413	lambda repressor-like DNA-binding domains
Shewana3_1249	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1250	SSF53098	Ribonuclease H-like
Shewana3_1251	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1252	SSF102712	JAB1/MPN domain
Shewana3_1254	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1255	SSF143597	YojJ-like
Shewana3_1256	SSF81301	Nucleotidyltransferase
Shewana3_1257	SSF52151	FabD/lysophospholipase-like
Shewana3_1258	SSF47413	lambda repressor-like DNA-binding domains
Shewana3_1262	SSF46955	Putative DNA-binding domain
Shewana3_1264	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1265	SSF47598	Ribbon-helix-helix
Shewana3_1267	SSF51306	LexA/Signal peptidase
Shewana3_1269	SSF47413	lambda repressor-like DNA-binding domains
Shewana3_1270	SSF103473	MFS general substrate transporter
Shewana3_1271	SSF46785	"Winged helix" DNA-binding domain
Shewana3_1272	SSF63829	Calcium-dependent phosphotriesterase
Shewana3_1273	SSF63829	Calcium-dependent phosphotriesterase
Shewana3_1274	SSF63829	Calcium-dependent phosphotriesterase
Shewana3_1275	SSF46785	"Winged helix" DNA-binding domain
Shewana3_1275	SSF55781	GAF domain-like
Shewana3_1276	SSF143744	GlcG-like
Shewana3_1277	SSF103473	MFS general substrate transporter
Shewana3_1278	SSF46785	"Winged helix" DNA-binding domain
Shewana3_1278	SSF53850	Periplasmic binding protein-like II
Shewana3_1280	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1281	SSF47598	Ribbon-helix-helix
Shewana3_1282	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1285	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1286	SSF101082	Typo IV secretion system protein TraC
Shewana3_1289	SSF54427	NTF2-like
Shewana3_1293	SSF103190	Sensory domain-like
Shewana3_1293	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_1295	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shewana3_1295	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shewana3_1295	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shewana3_1296	SSF111369	HlyD-like secretion proteins
Shewana3_1297	SSF46689	Homeodomain-like
Shewana3_1298	SSF103515	Autotransporter
Shewana3_1299	SSF54626	Chalcone isomerase
Shewana3_1301	SSF48452	TPR-like
Shewana3_1302	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_1303	SSF53383	PLP-dependent transferases
Shewana3_1304	SSF51269	AFP III-like domain
Shewana3_1304	SSF51569	Aldolase
Shewana3_1305	SSF51197	Clavaminate synthase-like
Shewana3_1306	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_1308	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Shewana3_1308	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_1309	SSF53448	Nucleotide-diphospho-sugar transferases
Shewana3_1316	SSF140566	FlgN-like
Shewana3_1317	SSF101498	Anti-sigma factor FlgM
Shewana3_1319	SSF50341	CheW-like
Shewana3_1319	SSF52172	CheY-like
Shewana3_1320	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
Shewana3_1320	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_1324	SSF117143	Flagellar hook protein flgE
Shewana3_1325	SSF117143	Flagellar hook protein flgE
Shewana3_1326	SSF117143	Flagellar hook protein flgE
Shewana3_1330	SSF64518	Phase 1 flagellin
Shewana3_1331	SSF64518	Phase 1 flagellin
Shewana3_1332	SSF64518	Phase 1 flagellin
Shewana3_1333	SSF64518	Phase 1 flagellin
Shewana3_1334	SSF160214	FlaG-like
Shewana3_1337	SSF101116	Flagellar export chaperone FliS
Shewana3_1338	SSF46689	Homeodomain-like
Shewana3_1338	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1339	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_1339	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_1339	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_1340	SSF46689	Homeodomain-like
Shewana3_1340	SSF52172	CheY-like
Shewana3_1340	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1343	SSF48029	FliG
Shewana3_1344	SSF160527	V-type ATPase subunit E-like
Shewana3_1345	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1349	SSF101801	Surface presentation of antigens (SPOA)
Shewana3_1349	SSF103039	CheC-like
Shewana3_1350	SSF101801	Surface presentation of antigens (SPOA)
Shewana3_1355	SSF160544	EscU C-terminal domain-like
Shewana3_1357	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1358	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1359	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Shewana3_1359	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Shewana3_1360	SSF52172	CheY-like
Shewana3_1361	SSF75708	Chemotaxis phosphatase CheZ
Shewana3_1362	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Shewana3_1362	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_1362	SSF50341	CheW-like
Shewana3_1362	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_1363	SSF52172	CheY-like
Shewana3_1363	SSF52738	Methylesterase CheB, C-terminal domain
Shewana3_1365	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1366	SSF50341	CheW-like
Shewana3_1367	SSF50341	CheW-like
Shewana3_1369	SSF160544	EscU C-terminal domain-like
Shewana3_1372	SSF52172	CheY-like
Shewana3_1373	SSF103473	MFS general substrate transporter
Shewana3_1374	SSF50104	Translation proteins SH3-like domain
Shewana3_1374	SSF82679	N-utilization substance G protein NusG, N-terminal domain
Shewana3_1378	SSF53448	Nucleotide-diphospho-sugar transferases
Shewana3_1379	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_1380	SSF53448	Nucleotide-diphospho-sugar transferases
Shewana3_1381	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_1382	SSF51182	RmlC-like cupins
Shewana3_1384	SSF53448	Nucleotide-diphospho-sugar transferases
Shewana3_1387	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Shewana3_1387	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_1387	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
Shewana3_1388	SSF51182	RmlC-like cupins
Shewana3_1390	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_1390	SSF55781	GAF domain-like
Shewana3_1390	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_1391	SSF53448	Nucleotide-diphospho-sugar transferases
Shewana3_1392	SSF51182	RmlC-like cupins
Shewana3_1395	SSF159270	YmcC-like
Shewana3_1397	SSF52151	FabD/lysophospholipase-like
Shewana3_1398	SSF52954	Class II aaRS ABD-related
Shewana3_1398	SSF55681	Class II aaRS and biotin synthetases
Shewana3_1398	SSF55826	YbaK/ProRS associated domain
Shewana3_1399	SSF51161	Trimeric LpxA-like enzymes
Shewana3_1400	SSF118196	YaeB-like
Shewana3_1402	SSF51338	Composite domain of metallo-dependent hydrolases
Shewana3_1402	SSF51556	Metallo-dependent hydrolases
Shewana3_1403	SSF51338	Composite domain of metallo-dependent hydrolases
Shewana3_1403	SSF51556	Metallo-dependent hydrolases
Shewana3_1404	SSF81273	H-NS histone-like proteins
Shewana3_1405	SSF52402	Adenine nucleotide alpha hydrolases-like
Shewana3_1406	SSF52402	Adenine nucleotide alpha hydrolases-like
Shewana3_1406	SSF52467	DHS-like NAD/FAD-binding domain
Shewana3_1408	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shewana3_1409	SSF48695	Multiheme cytochromes
Shewana3_1410	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1410	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Shewana3_1411	SSF53955	Lysozyme-like
Shewana3_1411	SSF56601	beta-lactamase/transpeptidase-like
Shewana3_1412	SSF46689	Homeodomain-like
Shewana3_1412	SSF52172	CheY-like
Shewana3_1412	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1413	SSF103190	Sensory domain-like
Shewana3_1413	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_1413	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_1418	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
Shewana3_1418	SSF52374	Nucleotidylyl transferase
Shewana3_1419	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1419	SSF90123	ABC transporter transmembrane region
Shewana3_1420	SSF46689	Homeodomain-like
Shewana3_1420	SSF48150	DNA-glycosylase
Shewana3_1420	SSF55945	TATA-box binding protein-like
Shewana3_1420	SSF57884	Ada DNA repair protein, N-terminal domain (N-Ada 10)
Shewana3_1421	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
Shewana3_1421	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
Shewana3_1422	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1423	SSF52799	(Phosphotyrosine protein) phosphatases II
Shewana3_1424	SSF56024	Phospholipase D/nuclease
Shewana3_1425	SSF50341	CheW-like
Shewana3_1425	SSF52172	CheY-like
Shewana3_1426	SSF118215	Proton glutamate symport protein
Shewana3_1427	SSF49785	Galactose-binding domain-like
Shewana3_1428	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_1430	SSF55120	Pseudouridine synthase
Shewana3_1431	SSF52833	Thioredoxin-like
Shewana3_1434	SSF111337	QueA-like
Shewana3_1435	SSF51713	tRNA-guanine transglycosylase
Shewana3_1437	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shewana3_1438	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shewana3_1440	SSF52821	Rhodanese/Cell cycle control phosphatase
Shewana3_1441	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_1441	SSF75615	Siroheme synthase middle domains-like
Shewana3_1442	SSF52980	Restriction endonuclease-like
Shewana3_1443	SSF49785	Galactose-binding domain-like
Shewana3_1443	SSF52743	Subtilisin-like
Shewana3_1443	SSF54897	Protease propeptides/inhibitors
Shewana3_1444	SSF52821	Rhodanese/Cell cycle control phosphatase
Shewana3_1446	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shewana3_1446	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shewana3_1446	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shewana3_1447	SSF111369	HlyD-like secretion proteins
Shewana3_1449	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Shewana3_1450	SSF56935	Porins
Shewana3_1453	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Shewana3_1453	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Shewana3_1455	SSF48452	TPR-like
Shewana3_1455	SSF53300	vWA-like
Shewana3_1456	SSF53300	vWA-like
Shewana3_1459	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1460	SSF53901	Thiolase-like
Shewana3_1461	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Shewana3_1461	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_1461	SSF52096	ClpP/crotonase
Shewana3_1464	SSF141868	EAL domain-like
Shewana3_1464	SSF50998	Quinoprotein alcohol dehydrogenase-like
Shewana3_1464	SSF55073	Nucleotide cyclase
Shewana3_1464	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_1465	SSF63411	LuxS/MPP-like metallohydrolase
Shewana3_1466	SSF53254	Phosphoglycerate mutase-like
Shewana3_1467	SSF160443	SMR domain-like
Shewana3_1468	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_1469	SSF103263	Chorismate synthase, AroC
Shewana3_1470	SSF103473	MFS general substrate transporter
Shewana3_1471	SSF111331	NAD kinase/diacylglycerol kinase-like
Shewana3_1473	SSF75217	alpha/beta knot
Shewana3_1474	SSF51905	FAD/NAD(P)-binding domain
Shewana3_1475	SSF53901	Thiolase-like
Shewana3_1476	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_1476	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Shewana3_1477	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_1477	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Shewana3_1479	SSF55120	Pseudouridine synthase
Shewana3_1480	SSF53244	MurD-like peptide ligases, peptide-binding domain
Shewana3_1480	SSF53623	MurD-like peptide ligases, catalytic domain
Shewana3_1481	SSF110997	Sporulation related repeat
Shewana3_1483	SSF53271	PRTase-like
Shewana3_1483	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Shewana3_1486	SSF56712	Prokaryotic type I DNA topoisomerase
Shewana3_1487	SSF56935	Porins
Shewana3_1488	SSF46689	Homeodomain-like
Shewana3_1488	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1488	SSF55781	GAF domain-like
Shewana3_1489	SSF51905	FAD/NAD(P)-binding domain
Shewana3_1489	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Shewana3_1490	SSF48557	L-aspartase-like
Shewana3_1491	SSF48695	Multiheme cytochromes
Shewana3_1492	SSF53474	alpha/beta-Hydrolases
Shewana3_1493	SSF56281	Metallo-hydrolase/oxidoreductase
Shewana3_1495	SSF53448	Nucleotide-diphospho-sugar transferases
Shewana3_1496	SSF47741	CO dehydrogenase ISP C-domain like
Shewana3_1496	SSF54292	2Fe-2S ferredoxin-like
Shewana3_1497	SSF56003	Molybdenum cofactor-binding domain
Shewana3_1499	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_1501	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_1502	SSF54427	NTF2-like
Shewana3_1503	SSF56219	DNase I-like
Shewana3_1504	SSF54909	Dimeric alpha+beta barrel
Shewana3_1507	SSF56935	Porins
Shewana3_1509	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_1510	SSF51905	FAD/NAD(P)-binding domain
Shewana3_1513	SSF56935	Porins
Shewana3_1514	SSF53474	alpha/beta-Hydrolases
Shewana3_1515	SSF51366	Ribulose-phoshate binding barrel
Shewana3_1516	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Shewana3_1517	SSF51366	Ribulose-phoshate binding barrel
Shewana3_1518	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Shewana3_1518	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Shewana3_1519	SSF52317	Class I glutamine amidotransferase-like
Shewana3_1520	SSF56322	ADC synthase
Shewana3_1521	SSF89550	PHP domain-like
Shewana3_1522	SSF55821	YrdC/RibB
Shewana3_1524	SSF46785	"Winged helix" DNA-binding domain
Shewana3_1525	SSF55120	Pseudouridine synthase
Shewana3_1525	SSF55174	Alpha-L RNA-binding motif
Shewana3_1526	SSF50939	Sialidases
Shewana3_1527	SSF143422	Transposase IS200-like
Shewana3_1528	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_1529	SSF53474	alpha/beta-Hydrolases
Shewana3_1530	SSF52096	ClpP/crotonase
Shewana3_1531	SSF46689	Homeodomain-like
Shewana3_1533	SSF51126	Pectin lyase-like
Shewana3_1534	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_1535	SSF53474	alpha/beta-Hydrolases
Shewana3_1537	SSF52266	SGNH hydrolase
Shewana3_1538	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1540	SSF51306	LexA/Signal peptidase
Shewana3_1542	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_1543	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Shewana3_1545	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_1549	SSF46689	Homeodomain-like
Shewana3_1550	SSF53098	Ribonuclease H-like
Shewana3_1551	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1551	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Shewana3_1551	SSF75138	HprK N-terminal domain-like
Shewana3_1552	SSF53067	Actin-like ATPase domain
Shewana3_1554	SSF102114	Radical SAM enzymes
Shewana3_1555	SSF51998	PFL-like glycyl radical enzymes
Shewana3_1558	SSF56935	Porins
Shewana3_1560	SSF46785	"Winged helix" DNA-binding domain
Shewana3_1560	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_1561	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Shewana3_1563	SSF53901	Thiolase-like
Shewana3_1565	SSF49344	CBD9-like
Shewana3_1567	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1568	SSF64383	Cell-division protein ZipA, C-terminal domain
Shewana3_1569	SSF47781	RuvA domain 2-like
Shewana3_1569	SSF50249	Nucleic acid-binding proteins
Shewana3_1569	SSF52113	BRCT domain
Shewana3_1569	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
Shewana3_1571	SSF109604	HD-domain/PDEase-like
Shewana3_1572	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_1573	SSF52833	Thioredoxin-like
Shewana3_1576	SSF51206	cAMP-binding domain-like
Shewana3_1576	SSF54631	CBS-domain pair
Shewana3_1577	SSF53098	Ribonuclease H-like
Shewana3_1578	SSF46785	"Winged helix" DNA-binding domain
Shewana3_1579	SSF50129	GroES-like
Shewana3_1579	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_1581	SSF53901	Thiolase-like
Shewana3_1582	SSF46785	"Winged helix" DNA-binding domain
Shewana3_1582	SSF48008	GntR ligand-binding domain-like
Shewana3_1583	SSF56784	HAD-like
Shewana3_1585	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
Shewana3_1585	SSF56300	Metallo-dependent phosphatases
Shewana3_1586	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shewana3_1588	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_1589	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_1595	SSF49299	PKD domain
Shewana3_1595	SSF56219	DNase I-like
Shewana3_1595	SSF74853	Lamin A/C globular tail domain
Shewana3_1600	SSF46565	Chaperone J-domain
Shewana3_1601	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_1602	SSF52833	Thioredoxin-like
Shewana3_1603	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1606	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shewana3_1607	SSF54211	Ribosomal protein S5 domain 2-like
Shewana3_1608	SSF46894	C-terminal effector domain of the bipartite response regulators
Shewana3_1608	SSF52172	CheY-like
Shewana3_1609	SSF46600	C-terminal UvrC-binding domain of UvrB
Shewana3_1609	SSF47781	RuvA domain 2-like
Shewana3_1609	SSF82771	GIY-YIG endonuclease
Shewana3_1613	SSF52743	Subtilisin-like
Shewana3_1615	SSF47729	IHF-like DNA-binding proteins
Shewana3_1619	SSF56112	Protein kinase-like (PK-like)
Shewana3_1620	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1622	SSF46785	"Winged helix" DNA-binding domain
Shewana3_1624	SSF51419	PLP-binding barrel
Shewana3_1625	SSF56276	S-adenosylmethionine decarboxylase
Shewana3_1626	SSF50475	FMN-binding split barrel
Shewana3_1628	SSF101874	YceI-like
Shewana3_1630	SSF52091	SpoIIaa-like
Shewana3_1631	SSF50630	Acid proteases
Shewana3_1632	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_1632	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_1633	SSF158442	DsbB-like
Shewana3_1635	SSF46785	"Winged helix" DNA-binding domain
Shewana3_1635	SSF48008	GntR ligand-binding domain-like
Shewana3_1638	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1639	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
Shewana3_1639	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
Shewana3_1640	SSF52833	Thioredoxin-like
Shewana3_1643	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1644	SSF46689	Homeodomain-like
Shewana3_1645	SSF53098	Ribonuclease H-like
Shewana3_1648	SSF52833	Thioredoxin-like
Shewana3_1649	SSF48452	TPR-like
Shewana3_1650	SSF64307	SirA-like
Shewana3_1652	SSF46785	"Winged helix" DNA-binding domain
Shewana3_1652	SSF53850	Periplasmic binding protein-like II
Shewana3_1654	SSF52833	Thioredoxin-like
Shewana3_1655	SSF55021	ACT-like
Shewana3_1656	SSF51569	Aldolase
Shewana3_1658	SSF111369	HlyD-like secretion proteins
Shewana3_1659	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shewana3_1659	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shewana3_1659	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shewana3_1660	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_1661	SSF50475	FMN-binding split barrel
Shewana3_1664	SSF52317	Class I glutamine amidotransferase-like
Shewana3_1666	SSF100950	NagB/RpiA/CoA transferase-like
Shewana3_1667	SSF100950	NagB/RpiA/CoA transferase-like
Shewana3_1668	SSF51569	Aldolase
Shewana3_1669	SSF51230	Single hybrid motif
Shewana3_1669	SSF51246	Rudiment single hybrid motif
Shewana3_1669	SSF52440	PreATP-grasp domain
Shewana3_1669	SSF56059	Glutathione synthetase ATP-binding domain-like
Shewana3_1670	SSF52096	ClpP/crotonase
Shewana3_1671	SSF52096	ClpP/crotonase
Shewana3_1672	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Shewana3_1672	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Shewana3_1673	SSF46955	Putative DNA-binding domain
Shewana3_1674	SSF141523	L,D-transpeptidase catalytic domain-like
Shewana3_1674	SSF47090	PGBD-like
Shewana3_1675	SSF56801	Acetyl-CoA synthetase-like
Shewana3_1676	SSF103481	Multidrug resistance efflux transporter EmrE
Shewana3_1677	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Shewana3_1677	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_1678	SSF49785	Galactose-binding domain-like
Shewana3_1678	SSF52743	Subtilisin-like
Shewana3_1683	SSF46785	"Winged helix" DNA-binding domain
Shewana3_1683	SSF53850	Periplasmic binding protein-like II
Shewana3_1685	SSF53213	LigB-like
Shewana3_1687	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_1688	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shewana3_1690	SSF52025	PA domain
Shewana3_1690	SSF52743	Subtilisin-like
Shewana3_1691	SSF46785	"Winged helix" DNA-binding domain
Shewana3_1691	SSF53850	Periplasmic binding protein-like II
Shewana3_1692	SSF103473	MFS general substrate transporter
Shewana3_1693	SSF53474	alpha/beta-Hydrolases
Shewana3_1694	SSF50129	GroES-like
Shewana3_1694	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_1695	SSF51182	RmlC-like cupins
Shewana3_1696	SSF50891	Cyclophilin-like
Shewana3_1697	SSF51182	RmlC-like cupins
Shewana3_1698	SSF46689	Homeodomain-like
Shewana3_1701	SSF88697	PUA domain-like
Shewana3_1702	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shewana3_1702	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shewana3_1702	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shewana3_1703	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shewana3_1703	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shewana3_1703	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shewana3_1704	SSF111369	HlyD-like secretion proteins
Shewana3_1705	SSF48256	Citrate synthase
Shewana3_1706	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
Shewana3_1707	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
Shewana3_1708	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
Shewana3_1708	SSF51905	FAD/NAD(P)-binding domain
Shewana3_1708	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Shewana3_1709	SSF46548	alpha-helical ferredoxin
Shewana3_1709	SSF54292	2Fe-2S ferredoxin-like
Shewana3_1710	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Shewana3_1711	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
Shewana3_1711	SSF51230	Single hybrid motif
Shewana3_1711	SSF52777	CoA-dependent acyltransferases
Shewana3_1712	SSF52210	Succinyl-CoA synthetase domains
Shewana3_1712	SSF56059	Glutathione synthetase ATP-binding domain-like
Shewana3_1713	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_1713	SSF52210	Succinyl-CoA synthetase domains
Shewana3_1714	SSF54534	FKBP-like
Shewana3_1715	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_1716	SSF46785	"Winged helix" DNA-binding domain
Shewana3_1717	SSF52467	DHS-like NAD/FAD-binding domain
Shewana3_1718	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1720	SSF143865	CorA soluble domain-like
Shewana3_1720	SSF144083	Magnesium transport protein CorA, transmembrane region
Shewana3_1721	SSF109604	HD-domain/PDEase-like
Shewana3_1723	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_1724	SSF52172	CheY-like
Shewana3_1726	SSF118215	Proton glutamate symport protein
Shewana3_1727	SSF49373	Invasin/intimin cell-adhesion fragments
Shewana3_1728	SSF55909	Pentein
Shewana3_1729	SSF56712	Prokaryotic type I DNA topoisomerase
Shewana3_1729	SSF57783	Zinc beta-ribbon
Shewana3_1731	SSF46785	"Winged helix" DNA-binding domain
Shewana3_1731	SSF53850	Periplasmic binding protein-like II
Shewana3_1732	SSF46894	C-terminal effector domain of the bipartite response regulators
Shewana3_1732	SSF52172	CheY-like
Shewana3_1733	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shewana3_1734	SSF51569	Aldolase
Shewana3_1736	SSF51621	Phosphoenolpyruvate/pyruvate domain
Shewana3_1736	SSF52009	Phosphohistidine domain
Shewana3_1736	SSF56059	Glutathione synthetase ATP-binding domain-like
Shewana3_1737	SSF46548	alpha-helical ferredoxin
Shewana3_1737	SSF55103	FAD-linked oxidases, C-terminal domain
Shewana3_1737	SSF56176	FAD-binding/transporter-associated domain-like
Shewana3_1739	SSF46785	"Winged helix" DNA-binding domain
Shewana3_1740	SSF52025	PA domain
Shewana3_1740	SSF52743	Subtilisin-like
Shewana3_1742	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_1742	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Shewana3_1744	SSF51197	Clavaminate synthase-like
Shewana3_1745	SSF48557	L-aspartase-like
Shewana3_1746	SSF101322	YcfC-like
Shewana3_1747	SSF52402	Adenine nucleotide alpha hydrolases-like
Shewana3_1748	SSF55811	Nudix
Shewana3_1749	SSF55120	Pseudouridine synthase
Shewana3_1750	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Shewana3_1751	SSF50249	Nucleic acid-binding proteins
Shewana3_1752	SSF54736	ClpS-like
Shewana3_1753	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1753	SSF81923	Double Clp-N motif
Shewana3_1754	SSF50249	Nucleic acid-binding proteins
Shewana3_1755	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_1756	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_1758	SSF102705	NIF3 (NGG1p interacting factor 3)-like
Shewana3_1760	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Shewana3_1760	SSF50249	Nucleic acid-binding proteins
Shewana3_1760	SSF52374	Nucleotidylyl transferase
Shewana3_1760	SSF57770	Methionyl-tRNA synthetase (MetRS), Zn-domain
Shewana3_1761	SSF117916	Fe-S cluster assembly (FSCA) domain-like
Shewana3_1761	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1762	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1763	SSF51283	dUTPase-like
Shewana3_1764	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
Shewana3_1766	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1767	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1769	SSF51556	Metallo-dependent hydrolases
Shewana3_1770	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_1776	SSF55781	GAF domain-like
Shewana3_1777	SSF48657	FinO-like
Shewana3_1778	SSF50156	PDZ domain-like
Shewana3_1778	SSF52096	ClpP/crotonase
Shewana3_1779	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shewana3_1779	SSF63737	Leukotriene A4 hydrolase N-terminal domain
Shewana3_1783	SSF50939	Sialidases
Shewana3_1784	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shewana3_1785	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_1785	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Shewana3_1786	SSF51395	FMN-linked oxidoreductases
Shewana3_1788	SSF53720	ALDH-like
Shewana3_1788	SSF56796	Dehydroquinate synthase-like
Shewana3_1790	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_1791	SSF56349	DNA breaking-rejoining enzymes
Shewana3_1792	SSF81301	Nucleotidyltransferase
Shewana3_1797	SSF47598	Ribbon-helix-helix
Shewana3_1799	SSF56349	DNA breaking-rejoining enzymes
Shewana3_1802	SSF143737	YeeU-like
Shewana3_1804	SSF102712	JAB1/MPN domain
Shewana3_1805	SSF46955	Putative DNA-binding domain
Shewana3_1807	SSF53300	vWA-like
Shewana3_1811	SSF46689	Homeodomain-like
Shewana3_1811	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1812	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1813	SSF53300	vWA-like
Shewana3_1818	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1819	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_1822	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1823	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1824	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1825	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1829	SSF53067	Actin-like ATPase domain
Shewana3_1831	SSF56300	Metallo-dependent phosphatases
Shewana3_1832	SSF56672	DNA/RNA polymerases
Shewana3_1833	SSF51306	LexA/Signal peptidase
Shewana3_1834	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_1835	SSF51905	FAD/NAD(P)-binding domain
Shewana3_1836	SSF46785	"Winged helix" DNA-binding domain
Shewana3_1836	SSF53850	Periplasmic binding protein-like II
Shewana3_1837	SSF50129	GroES-like
Shewana3_1837	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_1838	SSF53474	alpha/beta-Hydrolases
Shewana3_1839	SSF50494	Trypsin-like serine proteases
Shewana3_1847	SSF101386	all-alpha NTP pyrophosphatases
Shewana3_1847	SSF141734	HisI-like
Shewana3_1848	SSF51366	Ribulose-phoshate binding barrel
Shewana3_1849	SSF51366	Ribulose-phoshate binding barrel
Shewana3_1850	SSF52317	Class I glutamine amidotransferase-like
Shewana3_1851	SSF54211	Ribosomal protein S5 domain 2-like
Shewana3_1851	SSF56784	HAD-like
Shewana3_1852	SSF53383	PLP-dependent transferases
Shewana3_1853	SSF53720	ALDH-like
Shewana3_1854	SSF53850	Periplasmic binding protein-like II
Shewana3_1854	SSF54913	GlnB-like
Shewana3_1859	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1861	SSF56935	Porins
Shewana3_1862	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_1863	SSF46589	tRNA-binding arm
Shewana3_1863	SSF55681	Class II aaRS and biotin synthetases
Shewana3_1864	SSF46955	Putative DNA-binding domain
Shewana3_1864	SSF50249	Nucleic acid-binding proteins
Shewana3_1864	SSF54991	Anticodon-binding domain of PheRS
Shewana3_1864	SSF55681	Class II aaRS and biotin synthetases
Shewana3_1864	SSF56037	PheT/TilS domain
Shewana3_1865	SSF47729	IHF-like DNA-binding proteins
Shewana3_1866	SSF50494	Trypsin-like serine proteases
Shewana3_1867	SSF48695	Multiheme cytochromes
Shewana3_1868	SSF55326	PurM N-terminal domain-like
Shewana3_1868	SSF56042	PurM C-terminal domain-like
Shewana3_1870	SSF159127	HupF/HypC-like
Shewana3_1871	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1872	SSF50692	ADC-like
Shewana3_1872	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shewana3_1873	SSF53927	Cytidine deaminase-like
Shewana3_1874	SSF46785	"Winged helix" DNA-binding domain
Shewana3_1874	SSF53850	Periplasmic binding protein-like II
Shewana3_1875	SSF54975	Acylphosphatase/BLUF domain-like
Shewana3_1875	SSF55821	YrdC/RibB
Shewana3_1877	SSF53163	HybD-like
Shewana3_1878	SSF81342	Transmembrane di-heme cytochromes
Shewana3_1879	SSF56762	HydB/Nqo4-like
Shewana3_1880	SSF56770	HydA/Nqo6-like
Shewana3_1881	SSF52833	Thioredoxin-like
Shewana3_1884	SSF143631	ApbE-like
Shewana3_1885	SSF52172	CheY-like
Shewana3_1886	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_1886	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_1887	SSF74650	Galactose mutarotase-like
Shewana3_1887	SSF81296	E set domains
Shewana3_1888	SSF53448	Nucleotide-diphospho-sugar transferases
Shewana3_1889	SSF141523	L,D-transpeptidase catalytic domain-like
Shewana3_1889	SSF47090	PGBD-like
Shewana3_1890	SSF55166	Hedgehog/DD-peptidase
Shewana3_1892	SSF50715	Ribosomal protein L25-like
Shewana3_1895	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Shewana3_1896	SSF54631	CBS-domain pair
Shewana3_1897	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1900	SSF50692	ADC-like
Shewana3_1900	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shewana3_1901	SSF48695	Multiheme cytochromes
Shewana3_1902	SSF48695	Multiheme cytochromes
Shewana3_1903	SSF52980	Restriction endonuclease-like
Shewana3_1904	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_1906	SSF53448	Nucleotide-diphospho-sugar transferases
Shewana3_1907	SSF56796	Dehydroquinate synthase-like
Shewana3_1908	SSF53383	PLP-dependent transferases
Shewana3_1909	SSF53056	beta-carbonic anhydrase, cab
Shewana3_1910	SSF53474	alpha/beta-Hydrolases
Shewana3_1911	SSF55166	Hedgehog/DD-peptidase
Shewana3_1912	SSF53187	Zn-dependent exopeptidases
Shewana3_1912	SSF55031	Bacterial exopeptidase dimerisation domain
Shewana3_1913	SSF52833	Thioredoxin-like
Shewana3_1914	SSF56935	Porins
Shewana3_1915	SSF46785	"Winged helix" DNA-binding domain
Shewana3_1915	SSF53850	Periplasmic binding protein-like II
Shewana3_1916	SSF111369	HlyD-like secretion proteins
Shewana3_1917	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shewana3_1917	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shewana3_1917	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shewana3_1918	SSF56954	Outer membrane efflux proteins (OEP)
Shewana3_1921	SSF159594	XCC0632-like
Shewana3_1923	SSF46689	Homeodomain-like
Shewana3_1923	SSF51182	RmlC-like cupins
Shewana3_1924	SSF48208	Six-hairpin glycosidases
Shewana3_1924	SSF74650	Galactose mutarotase-like
Shewana3_1925	SSF103473	MFS general substrate transporter
Shewana3_1926	SSF54909	Dimeric alpha+beta barrel
Shewana3_1927	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_1929	SSF69118	AhpD-like
Shewana3_1930	SSF46689	Homeodomain-like
Shewana3_1931	SSF51445	(Trans)glycosidases
Shewana3_1933	SSF55811	Nudix
Shewana3_1937	SSF51391	Thiamin phosphate synthase
Shewana3_1937	SSF53613	Ribokinase-like
Shewana3_1938	SSF69572	Activating enzymes of the ubiquitin-like proteins
Shewana3_1939	SSF54285	MoaD/ThiS
Shewana3_1940	SSF110399	ThiG-like
Shewana3_1941	SSF102114	Radical SAM enzymes
Shewana3_1944	SSF46785	"Winged helix" DNA-binding domain
Shewana3_1944	SSF53850	Periplasmic binding protein-like II
Shewana3_1946	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shewana3_1947	SSF56059	Glutathione synthetase ATP-binding domain-like
Shewana3_1948	SSF54001	Cysteine proteinases
Shewana3_1949	SSF50630	Acid proteases
Shewana3_1950	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_1951	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_1952	SSF53850	Periplasmic binding protein-like II
Shewana3_1952	SSF55073	Nucleotide cyclase
Shewana3_1953	SSF50249	Nucleic acid-binding proteins
Shewana3_1953	SSF55261	GAD domain-like
Shewana3_1953	SSF55681	Class II aaRS and biotin synthetases
Shewana3_1954	SSF75625	YebC-like
Shewana3_1955	SSF53098	Ribonuclease H-like
Shewana3_1956	SSF46929	DNA helicase RuvA subunit, C-terminal domain
Shewana3_1956	SSF47781	RuvA domain 2-like
Shewana3_1956	SSF50249	Nucleic acid-binding proteins
Shewana3_1957	SSF46785	"Winged helix" DNA-binding domain
Shewana3_1957	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1958	SSF56935	Porins
Shewana3_1959	SSF52172	CheY-like
Shewana3_1960	SSF53187	Zn-dependent exopeptidases
Shewana3_1963	SSF53774	Glutaminase/Asparaginase
Shewana3_1964	SSF52096	ClpP/crotonase
Shewana3_1965	SSF51395	FMN-linked oxidoreductases
Shewana3_1965	SSF51905	FAD/NAD(P)-binding domain
Shewana3_1965	SSF51971	Nucleotide-binding domain
Shewana3_1966	SSF54427	NTF2-like
Shewana3_1967	SSF54292	2Fe-2S ferredoxin-like
Shewana3_1968	SSF47240	Ferritin-like
Shewana3_1969	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
Shewana3_1969	SSF51998	PFL-like glycyl radical enzymes
Shewana3_1970	SSF56784	HAD-like
Shewana3_1971	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_1972	SSF101904	GyrA/ParC C-terminal domain-like
Shewana3_1972	SSF56719	Type II DNA topoisomerase
Shewana3_1973	SSF53383	PLP-dependent transferases
Shewana3_1974	SSF53383	PLP-dependent transferases
Shewana3_1975	SSF55205	EPT/RTPC-like
Shewana3_1976	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_1977	SSF50249	Nucleic acid-binding proteins
Shewana3_1978	SSF47729	IHF-like DNA-binding proteins
Shewana3_1980	SSF48452	TPR-like
Shewana3_1981	SSF51366	Ribulose-phoshate binding barrel
Shewana3_1982	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_1984	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Shewana3_1984	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Shewana3_1985	SSF56601	beta-lactamase/transpeptidase-like
Shewana3_1987	SSF55331	Tautomerase/MIF
Shewana3_1988	SSF56024	Phospholipase D/nuclease
Shewana3_1989	SSF103473	MFS general substrate transporter
Shewana3_1990	SSF56601	beta-lactamase/transpeptidase-like
Shewana3_1992	SSF111369	HlyD-like secretion proteins
Shewana3_1993	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shewana3_1993	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shewana3_1993	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shewana3_1994	SSF56954	Outer membrane efflux proteins (OEP)
Shewana3_1995	SSF63829	Calcium-dependent phosphotriesterase
Shewana3_1996	SSF47823	lambda integrase-like, N-terminal domain
Shewana3_1996	SSF56349	DNA breaking-rejoining enzymes
Shewana3_1999	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2000	SSF49772	Ecotin, trypsin inhibitor
Shewana3_2002	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Shewana3_2003	SSF52374	Nucleotidylyl transferase
Shewana3_2004	SSF53448	Nucleotide-diphospho-sugar transferases
Shewana3_2006	SSF53448	Nucleotide-diphospho-sugar transferases
Shewana3_2011	SSF52091	SpoIIaa-like
Shewana3_2012	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_2013	SSF52172	CheY-like
Shewana3_2013	SSF81606	PP2C-like
Shewana3_2014	SSF53850	Periplasmic binding protein-like II
Shewana3_2015	SSF158472	HAMP domain-like
Shewana3_2015	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Shewana3_2015	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_2015	SSF52172	CheY-like
Shewana3_2015	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_2015	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_2016	SSF46689	Homeodomain-like
Shewana3_2016	SSF52172	CheY-like
Shewana3_2016	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2017	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_2020	SSF56349	DNA breaking-rejoining enzymes
Shewana3_2021	SSF109604	HD-domain/PDEase-like
Shewana3_2022	SSF56349	DNA breaking-rejoining enzymes
Shewana3_2024	SSF47413	lambda repressor-like DNA-binding domains
Shewana3_2025	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2026	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2027	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_2028	SSF116734	DNA methylase specificity domain
Shewana3_2030	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2031	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2032	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2033	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2035	SSF56281	Metallo-hydrolase/oxidoreductase
Shewana3_2038	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2040	SSF63380	Riboflavin synthase domain-like
Shewana3_2041	SSF57783	Zinc beta-ribbon
Shewana3_2043	SSF52954	Class II aaRS ABD-related
Shewana3_2043	SSF55186	ThrRS/AlaRS common domain
Shewana3_2043	SSF55681	Class II aaRS and biotin synthetases
Shewana3_2043	SSF81271	TGS-like
Shewana3_2044	SSF54364	Translation initiation factor IF3, N-terminal domain
Shewana3_2044	SSF55200	Translation initiation factor IF3, C-terminal domain
Shewana3_2045	SSF143034	L35p-like
Shewana3_2046	SSF74731	Ribosomal protein L20
Shewana3_2047	SSF51905	FAD/NAD(P)-binding domain
Shewana3_2048	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_2048	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Shewana3_2049	SSF46785	"Winged helix" DNA-binding domain
Shewana3_2049	SSF54909	Dimeric alpha+beta barrel
Shewana3_2050	SSF46785	"Winged helix" DNA-binding domain
Shewana3_2050	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2051	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
Shewana3_2052	SSF48019	post-AAA+ oligomerization domain-like
Shewana3_2052	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2054	SSF46589	tRNA-binding arm
Shewana3_2054	SSF55681	Class II aaRS and biotin synthetases
Shewana3_2056	SSF69721	DsrC, the gamma subunit of dissimilatory sulfite reductase
Shewana3_2057	SSF75169	DsrEFH-like
Shewana3_2058	SSF75169	DsrEFH-like
Shewana3_2059	SSF75169	DsrEFH-like
Shewana3_2061	SSF46785	"Winged helix" DNA-binding domain
Shewana3_2061	SSF53850	Periplasmic binding protein-like II
Shewana3_2062	SSF103473	MFS general substrate transporter
Shewana3_2064	SSF53067	Actin-like ATPase domain
Shewana3_2065	SSF53639	AraD/HMP-PK domain-like
Shewana3_2066	SSF50443	FucI/AraA C-terminal domain-like
Shewana3_2066	SSF53743	FucI/AraA N-terminal and middle domains
Shewana3_2067	SSF56784	HAD-like
Shewana3_2068	SSF46785	"Winged helix" DNA-binding domain
Shewana3_2068	SSF48008	GntR ligand-binding domain-like
Shewana3_2069	SSF75005	Arabinanase/levansucrase/invertase
Shewana3_2070	SSF143975	IlvD/EDD N-terminal domain-like
Shewana3_2070	SSF52016	LeuD/IlvD-like
Shewana3_2071	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_2072	SSF74650	Galactose mutarotase-like
Shewana3_2073	SSF53822	Periplasmic binding protein-like I
Shewana3_2074	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2077	SSF75005	Arabinanase/levansucrase/invertase
Shewana3_2078	SSF75005	Arabinanase/levansucrase/invertase
Shewana3_2080	SSF48208	Six-hairpin glycosidases
Shewana3_2081	SSF103473	MFS general substrate transporter
Shewana3_2082	SSF75005	Arabinanase/levansucrase/invertase
Shewana3_2083	SSF50370	Ricin B-like lectins
Shewana3_2083	SSF75005	Arabinanase/levansucrase/invertase
Shewana3_2085	SSF56935	Porins
Shewana3_2086	SSF49899	Concanavalin A-like lectins/glucanases
Shewana3_2086	SSF75005	Arabinanase/levansucrase/invertase
Shewana3_2087	SSF103481	Multidrug resistance efflux transporter EmrE
Shewana3_2088	SSF63829	Calcium-dependent phosphotriesterase
Shewana3_2089	SSF50692	ADC-like
Shewana3_2089	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shewana3_2090	SSF54862	4Fe-4S ferredoxins
Shewana3_2091	SSF81342	Transmembrane di-heme cytochromes
Shewana3_2092	SSF144020	FdhE-like
Shewana3_2093	SSF46689	Homeodomain-like
Shewana3_2095	SSF140570	MukF C-terminal domain-like
Shewana3_2097	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2100	SSF46689	Homeodomain-like
Shewana3_2101	SSF109604	HD-domain/PDEase-like
Shewana3_2103	SSF52980	Restriction endonuclease-like
Shewana3_2104	SSF56349	DNA breaking-rejoining enzymes
Shewana3_2105	SSF109604	HD-domain/PDEase-like
Shewana3_2105	SSF52172	CheY-like
Shewana3_2107	SSF81442	Cytochrome c oxidase subunit I-like
Shewana3_2108	SSF46626	Cytochrome c
Shewana3_2110	SSF46626	Cytochrome c
Shewana3_2112	SSF55008	HMA, heavy metal-associated domain
Shewana3_2112	SSF56784	HAD-like
Shewana3_2112	SSF81653	Calcium ATPase, transduction domain A
Shewana3_2112	SSF81665	Calcium ATPase, transmembrane domain M
Shewana3_2115	SSF46785	"Winged helix" DNA-binding domain
Shewana3_2115	SSF51206	cAMP-binding domain-like
Shewana3_2116	SSF52402	Adenine nucleotide alpha hydrolases-like
Shewana3_2117	SSF52402	Adenine nucleotide alpha hydrolases-like
Shewana3_2120	SSF142338	CofD-like
Shewana3_2121	SSF53383	PLP-dependent transferases
Shewana3_2122	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_2122	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Shewana3_2124	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_2124	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Shewana3_2125	SSF49329	Cu,Zn superoxide dismutase-like
Shewana3_2126	SSF53098	Ribonuclease H-like
Shewana3_2127	SSF48295	TrpR-like
Shewana3_2128	SSF142754	NadA-like
Shewana3_2129	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
Shewana3_2129	SSF51230	Single hybrid motif
Shewana3_2129	SSF52777	CoA-dependent acyltransferases
Shewana3_2130	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Shewana3_2130	SSF52922	TK C-terminal domain-like
Shewana3_2131	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Shewana3_2132	SSF53187	Zn-dependent exopeptidases
Shewana3_2133	SSF55068	Peptide methionine sulfoxide reductase
Shewana3_2134	SSF53738	Phosphoglucomutase, first 3 domains
Shewana3_2134	SSF55957	Phosphoglucomutase, C-terminal domain
Shewana3_2135	SSF47598	Ribbon-helix-helix
Shewana3_2135	SSF82808	Replication modulator SeqA, C-terminal DNA-binding domain
Shewana3_2136	SSF53474	alpha/beta-Hydrolases
Shewana3_2139	SSF52218	Flavoproteins
Shewana3_2141	SSF50104	Translation proteins SH3-like domain
Shewana3_2141	SSF50249	Nucleic acid-binding proteins
Shewana3_2142	SSF53098	Ribonuclease H-like
Shewana3_2143	SSF48295	TrpR-like
Shewana3_2145	SSF53383	PLP-dependent transferases
Shewana3_2146	SSF109604	HD-domain/PDEase-like
Shewana3_2147	SSF109604	HD-domain/PDEase-like
Shewana3_2148	SSF51569	Aldolase
Shewana3_2149	SSF143975	IlvD/EDD N-terminal domain-like
Shewana3_2149	SSF52016	LeuD/IlvD-like
Shewana3_2150	SSF100950	NagB/RpiA/CoA transferase-like
Shewana3_2151	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_2151	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Shewana3_2152	SSF46689	Homeodomain-like
Shewana3_2152	SSF53697	SIS domain
Shewana3_2153	SSF50800	PK beta-barrel domain-like
Shewana3_2153	SSF51621	Phosphoenolpyruvate/pyruvate domain
Shewana3_2153	SSF52935	PK C-terminal domain-like
Shewana3_2154	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Shewana3_2154	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Shewana3_2155	SSF46689	Homeodomain-like
Shewana3_2155	SSF48498	Tetracyclin repressor-like, C-terminal domain
Shewana3_2156	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shewana3_2157	SSF160443	SMR domain-like
Shewana3_2158	SSF54427	NTF2-like
Shewana3_2159	SSF103642	Sec-C motif
Shewana3_2159	SSF54427	NTF2-like
Shewana3_2160	SSF141868	EAL domain-like
Shewana3_2160	SSF55073	Nucleotide cyclase
Shewana3_2160	SSF55781	GAF domain-like
Shewana3_2160	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_2163	SSF102114	Radical SAM enzymes
Shewana3_2164	SSF52402	Adenine nucleotide alpha hydrolases-like
Shewana3_2165	SSF144091	Rhomboid-like
Shewana3_2166	SSF46600	C-terminal UvrC-binding domain of UvrB
Shewana3_2166	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2167	SSF141868	EAL domain-like
Shewana3_2167	SSF55073	Nucleotide cyclase
Shewana3_2169	SSF54862	4Fe-4S ferredoxins
Shewana3_2170	SSF142019	Nqo1 FMN-binding domain-like
Shewana3_2170	SSF46548	alpha-helical ferredoxin
Shewana3_2174	SSF48150	DNA-glycosylase
Shewana3_2175	SSF56349	DNA breaking-rejoining enzymes
Shewana3_2177	SSF56349	DNA breaking-rejoining enzymes
Shewana3_2183	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2191	SSF53098	Ribonuclease H-like
Shewana3_2197	SSF56281	Metallo-hydrolase/oxidoreductase
Shewana3_2200	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_2200	SSF52172	CheY-like
Shewana3_2200	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_2201	SSF141868	EAL domain-like
Shewana3_2201	SSF52172	CheY-like
Shewana3_2204	SSF103473	MFS general substrate transporter
Shewana3_2205	SSF46689	Homeodomain-like
Shewana3_2206	SSF55073	Nucleotide cyclase
Shewana3_2207	SSF49464	Carboxypeptidase regulatory domain-like
Shewana3_2207	SSF56935	Porins
Shewana3_2208	SSF50956	Thermostable phytase (3-phytase)
Shewana3_2209	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2210	SSF55961	Bet v1-like
Shewana3_2212	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Shewana3_2212	SSF52172	CheY-like
Shewana3_2212	SSF55073	Nucleotide cyclase
Shewana3_2213	SSF52172	CheY-like
Shewana3_2213	SSF52738	Methylesterase CheB, C-terminal domain
Shewana3_2214	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
Shewana3_2215	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
Shewana3_2215	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_2216	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_2216	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_2217	SSF50341	CheW-like
Shewana3_2218	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Shewana3_2218	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_2218	SSF50341	CheW-like
Shewana3_2218	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_2219	SSF52172	CheY-like
Shewana3_2220	SSF52172	CheY-like
Shewana3_2220	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_2221	SSF52091	SpoIIaa-like
Shewana3_2222	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_2223	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_2223	SSF52210	Succinyl-CoA synthetase domains
Shewana3_2223	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_2223	SSF56059	Glutathione synthetase ATP-binding domain-like
Shewana3_2224	SSF103473	MFS general substrate transporter
Shewana3_2225	SSF111369	HlyD-like secretion proteins
Shewana3_2226	SSF46785	"Winged helix" DNA-binding domain
Shewana3_2227	SSF55073	Nucleotide cyclase
Shewana3_2228	SSF53649	Alkaline phosphatase-like
Shewana3_2229	SSF50993	Peptidase/esterase 'gauge' domain
Shewana3_2229	SSF53474	alpha/beta-Hydrolases
Shewana3_2230	SSF46785	"Winged helix" DNA-binding domain
Shewana3_2231	SSF161111	Cation efflux protein transmembrane domain-like
Shewana3_2232	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Shewana3_2234	SSF56524	Oxidoreductase molybdopterin-binding domain
Shewana3_2236	SSF48435	Bacterial muramidases
Shewana3_2236	SSF53955	Lysozyme-like
Shewana3_2237	SSF141868	EAL domain-like
Shewana3_2239	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_2242	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2244	SSF54001	Cysteine proteinases
Shewana3_2245	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2245	SSF52980	Restriction endonuclease-like
Shewana3_2246	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2246	SSF52980	Restriction endonuclease-like
Shewana3_2247	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2249	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_2250	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_2250	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_2251	SSF53098	Ribonuclease H-like
Shewana3_2252	SSF47413	lambda repressor-like DNA-binding domains
Shewana3_2252	SSF53822	Periplasmic binding protein-like I
Shewana3_2253	SSF103039	CheC-like
Shewana3_2254	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_2255	SSF55021	ACT-like
Shewana3_2256	SSF55594	HPr-like
Shewana3_2257	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
Shewana3_2257	SSF51621	Phosphoenolpyruvate/pyruvate domain
Shewana3_2257	SSF52009	Phosphohistidine domain
Shewana3_2258	SSF51261	Duplicated hybrid motif
Shewana3_2261	SSF52821	Rhodanese/Cell cycle control phosphatase
Shewana3_2262	SSF47616	GST C-terminal domain-like
Shewana3_2262	SSF52833	Thioredoxin-like
Shewana3_2264	SSF52091	SpoIIaa-like
Shewana3_2266	SSF46785	"Winged helix" DNA-binding domain
Shewana3_2266	SSF53383	PLP-dependent transferases
Shewana3_2267	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase
Shewana3_2268	SSF103473	MFS general substrate transporter
Shewana3_2269	SSF52467	DHS-like NAD/FAD-binding domain
Shewana3_2269	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Shewana3_2270	SSF55021	ACT-like
Shewana3_2271	SSF49764	HSP20-like chaperones
Shewana3_2272	SSF54919	Nucleoside diphosphate kinase, NDK
Shewana3_2273	SSF140319	IscX-like
Shewana3_2274	SSF56059	Glutathione synthetase ATP-binding domain-like
Shewana3_2275	SSF54292	2Fe-2S ferredoxin-like
Shewana3_2276	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
Shewana3_2276	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
Shewana3_2276	SSF53067	Actin-like ATPase domain
Shewana3_2277	SSF46565	Chaperone J-domain
Shewana3_2277	SSF47144	HSC20 (HSCB), C-terminal oligomerisation domain
Shewana3_2278	SSF89360	HesB-like domain
Shewana3_2279	SSF82649	SufE/NifU
Shewana3_2280	SSF53383	PLP-dependent transferases
Shewana3_2281	SSF46785	"Winged helix" DNA-binding domain
Shewana3_2282	SSF51161	Trimeric LpxA-like enzymes
Shewana3_2283	SSF75217	alpha/beta knot
Shewana3_2284	SSF56655	Carbohydrate phosphatase
Shewana3_2286	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2289	SSF141259	CarD-like
Shewana3_2289	SSF143517	TRCF domain-like
Shewana3_2289	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2291	SSF54975	Acylphosphatase/BLUF domain-like
Shewana3_2293	SSF51445	(Trans)glycosidases
Shewana3_2295	SSF143548	Serine metabolism enzymes domain
Shewana3_2297	SSF48295	TrpR-like
Shewana3_2298	SSF53098	Ribonuclease H-like
Shewana3_2299	SSF53187	Zn-dependent exopeptidases
Shewana3_2300	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_2301	SSF53474	alpha/beta-Hydrolases
Shewana3_2301	SSF82171	DPP6 N-terminal domain-like
Shewana3_2302	SSF117457	FumA C-terminal domain-like
Shewana3_2303	SSF56322	ADC synthase
Shewana3_2304	SSF55811	Nudix
Shewana3_2306	SSF50249	Nucleic acid-binding proteins
Shewana3_2306	SSF55681	Class II aaRS and biotin synthetases
Shewana3_2307	SSF52440	PreATP-grasp domain
Shewana3_2307	SSF56059	Glutathione synthetase ATP-binding domain-like
Shewana3_2308	SSF141868	EAL domain-like
Shewana3_2308	SSF55073	Nucleotide cyclase
Shewana3_2308	SSF55781	GAF domain-like
Shewana3_2308	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_2309	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_2310	SSF103473	MFS general substrate transporter
Shewana3_2311	SSF51011	Glycosyl hydrolase domain
Shewana3_2311	SSF51445	(Trans)glycosidases
Shewana3_2312	SSF56935	Porins
Shewana3_2313	SSF51011	Glycosyl hydrolase domain
Shewana3_2313	SSF51445	(Trans)glycosidases
Shewana3_2313	SSF81296	E set domains
Shewana3_2314	SSF51445	(Trans)glycosidases
Shewana3_2315	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Shewana3_2317	SSF109915	Hypothetical protein YhaI
Shewana3_2319	SSF56420	Peptide deformylase
Shewana3_2320	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
Shewana3_2322	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Shewana3_2323	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Shewana3_2323	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Shewana3_2324	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_2325	SSF53098	Ribonuclease H-like
Shewana3_2326	SSF56281	Metallo-hydrolase/oxidoreductase
Shewana3_2327	SSF46689	Homeodomain-like
Shewana3_2327	SSF52317	Class I glutamine amidotransferase-like
Shewana3_2329	SSF103473	MFS general substrate transporter
Shewana3_2330	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_2330	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Shewana3_2331	SSF52799	(Phosphotyrosine protein) phosphatases II
Shewana3_2332	SSF52833	Thioredoxin-like
Shewana3_2334	SSF52788	Phosphotyrosine protein phosphatases I
Shewana3_2335	SSF46785	"Winged helix" DNA-binding domain
Shewana3_2336	SSF52788	Phosphotyrosine protein phosphatases I
Shewana3_2337	SSF46785	"Winged helix" DNA-binding domain
Shewana3_2339	SSF52440	PreATP-grasp domain
Shewana3_2339	SSF56059	Glutathione synthetase ATP-binding domain-like
Shewana3_2340	SSF54862	4Fe-4S ferredoxins
Shewana3_2341	SSF50692	ADC-like
Shewana3_2341	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shewana3_2343	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2345	SSF52833	Thioredoxin-like
Shewana3_2346	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shewana3_2346	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shewana3_2346	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shewana3_2347	SSF111369	HlyD-like secretion proteins
Shewana3_2350	SSF52833	Thioredoxin-like
Shewana3_2351	SSF46785	"Winged helix" DNA-binding domain
Shewana3_2353	SSF56349	DNA breaking-rejoining enzymes
Shewana3_2354	SSF56349	DNA breaking-rejoining enzymes
Shewana3_2355	SSF109604	HD-domain/PDEase-like
Shewana3_2356	SSF56349	DNA breaking-rejoining enzymes
Shewana3_2358	SSF47413	lambda repressor-like DNA-binding domains
Shewana3_2359	SSF46689	Homeodomain-like
Shewana3_2361	SSF53098	Ribonuclease H-like
Shewana3_2363	SSF48695	Multiheme cytochromes
Shewana3_2365	SSF53098	Ribonuclease H-like
Shewana3_2366	SSF53098	Ribonuclease H-like
Shewana3_2367	SSF46785	"Winged helix" DNA-binding domain
Shewana3_2367	SSF53850	Periplasmic binding protein-like II
Shewana3_2368	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_2369	SSF56281	Metallo-hydrolase/oxidoreductase
Shewana3_2370	SSF53955	Lysozyme-like
Shewana3_2370	SSF54106	LysM domain
Shewana3_2373	SSF89562	RraA-like
Shewana3_2376	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2377	SSF50891	Cyclophilin-like
Shewana3_2378	SSF53098	Ribonuclease H-like
Shewana3_2380	SSF53955	Lysozyme-like
Shewana3_2381	SSF160191	YcgL-like
Shewana3_2382	SSF63848	Cell-division inhibitor MinC, C-terminal domain
Shewana3_2383	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2384	SSF55229	Cell division protein MinE topological specificity domain
Shewana3_2385	SSF47819	HRDC-like
Shewana3_2385	SSF53098	Ribonuclease H-like
Shewana3_2386	SSF56801	Acetyl-CoA synthetase-like
Shewana3_2387	SSF53474	alpha/beta-Hydrolases
Shewana3_2388	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_2391	SSF53067	Actin-like ATPase domain
Shewana3_2392	SSF51569	Aldolase
Shewana3_2393	SSF51316	Mss4-like
Shewana3_2393	SSF55068	Peptide methionine sulfoxide reductase
Shewana3_2394	SSF51197	Clavaminate synthase-like
Shewana3_2395	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2398	SSF48452	TPR-like
Shewana3_2399	SSF52788	Phosphotyrosine protein phosphatases I
Shewana3_2401	SSF50249	Nucleic acid-binding proteins
Shewana3_2401	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
Shewana3_2403	SSF46785	"Winged helix" DNA-binding domain
Shewana3_2403	SSF53850	Periplasmic binding protein-like II
Shewana3_2405	SSF56059	Glutathione synthetase ATP-binding domain-like
Shewana3_2407	SSF52025	PA domain
Shewana3_2407	SSF53187	Zn-dependent exopeptidases
Shewana3_2408	SSF55073	Nucleotide cyclase
Shewana3_2409	SSF63817	Sortase
Shewana3_2410	SSF53300	vWA-like
Shewana3_2411	SSF103088	OmpA-like
Shewana3_2412	SSF52172	CheY-like
Shewana3_2413	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_2413	SSF49344	CBD9-like
Shewana3_2413	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_2414	SSF53383	PLP-dependent transferases
Shewana3_2416	SSF53067	Actin-like ATPase domain
Shewana3_2417	SSF140356	PPK N-terminal domain-like
Shewana3_2417	SSF143724	PHP14-like
Shewana3_2417	SSF56024	Phospholipase D/nuclease
Shewana3_2418	SSF109604	HD-domain/PDEase-like
Shewana3_2418	SSF53067	Actin-like ATPase domain
Shewana3_2419	SSF81324	Voltage-gated potassium channels
Shewana3_2420	SSF141523	L,D-transpeptidase catalytic domain-like
Shewana3_2421	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Shewana3_2423	SSF51261	Duplicated hybrid motif
Shewana3_2424	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Shewana3_2425	SSF46626	Cytochrome c
Shewana3_2427	SSF158651	YejL-like
Shewana3_2428	SSF53649	Alkaline phosphatase-like
Shewana3_2429	SSF51395	FMN-linked oxidoreductases
Shewana3_2430	SSF46785	"Winged helix" DNA-binding domain
Shewana3_2430	SSF53850	Periplasmic binding protein-like II
Shewana3_2431	SSF55073	Nucleotide cyclase
Shewana3_2431	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_2435	SSF55073	Nucleotide cyclase
Shewana3_2436	SSF53474	alpha/beta-Hydrolases
Shewana3_2438	SSF52402	Adenine nucleotide alpha hydrolases-like
Shewana3_2439	SSF53613	Ribokinase-like
Shewana3_2440	SSF53800	Chelatase
Shewana3_2441	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2442	SSF48452	TPR-like
Shewana3_2442	SSF52833	Thioredoxin-like
Shewana3_2443	SSF110942	HSP90 C-terminal domain
Shewana3_2443	SSF54211	Ribosomal protein S5 domain 2-like
Shewana3_2443	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_2444	SSF111304	Recombination protein RecR
Shewana3_2445	SSF82607	YbaB-like
Shewana3_2446	SSF48019	post-AAA+ oligomerization domain-like
Shewana3_2446	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2447	SSF53271	PRTase-like
Shewana3_2450	SSF51658	Xylose isomerase-like
Shewana3_2452	SSF51395	FMN-linked oxidoreductases
Shewana3_2453	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Shewana3_2454	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
Shewana3_2454	SSF56300	Metallo-dependent phosphatases
Shewana3_2455	SSF53474	alpha/beta-Hydrolases
Shewana3_2457	SSF48371	ARM repeat
Shewana3_2457	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shewana3_2457	SSF63737	Leukotriene A4 hydrolase N-terminal domain
Shewana3_2458	SSF54534	FKBP-like
Shewana3_2459	SSF47090	PGBD-like
Shewana3_2459	SSF53955	Lysozyme-like
Shewana3_2462	SSF50341	CheW-like
Shewana3_2462	SSF52172	CheY-like
Shewana3_2463	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_2464	SSF88697	PUA domain-like
Shewana3_2465	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Shewana3_2465	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Shewana3_2466	SSF51182	RmlC-like cupins
Shewana3_2469	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Shewana3_2471	SSF53474	alpha/beta-Hydrolases
Shewana3_2472	SSF53187	Zn-dependent exopeptidases
Shewana3_2473	SSF53850	Periplasmic binding protein-like II
Shewana3_2475	SSF56801	Acetyl-CoA synthetase-like
Shewana3_2477	SSF88697	PUA domain-like
Shewana3_2479	SSF51219	TRAP-like
Shewana3_2480	SSF46785	"Winged helix" DNA-binding domain
Shewana3_2480	SSF53850	Periplasmic binding protein-like II
Shewana3_2481	SSF51182	RmlC-like cupins
Shewana3_2482	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Shewana3_2483	SSF55073	Nucleotide cyclase
Shewana3_2484	SSF51161	Trimeric LpxA-like enzymes
Shewana3_2486	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_2487	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Shewana3_2491	SSF53187	Zn-dependent exopeptidases
Shewana3_2491	SSF55031	Bacterial exopeptidase dimerisation domain
Shewana3_2492	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shewana3_2493	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_2494	SSF55469	FMN-dependent nitroreductase-like
Shewana3_2497	SSF56112	Protein kinase-like (PK-like)
Shewana3_2499	SSF89957	MTH1187/YkoF-like
Shewana3_2500	SSF56935	Porins
Shewana3_2501	SSF46785	"Winged helix" DNA-binding domain
Shewana3_2501	SSF51206	cAMP-binding domain-like
Shewana3_2502	SSF103473	MFS general substrate transporter
Shewana3_2503	SSF53167	Purine and uridine phosphorylases
Shewana3_2505	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shewana3_2506	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shewana3_2507	SSF54197	HIT-like
Shewana3_2508	SSF50156	PDZ domain-like
Shewana3_2508	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shewana3_2509	SSF46894	C-terminal effector domain of the bipartite response regulators
Shewana3_2510	SSF81342	Transmembrane di-heme cytochromes
Shewana3_2511	SSF48695	Multiheme cytochromes
Shewana3_2513	SSF52317	Class I glutamine amidotransferase-like
Shewana3_2514	SSF74650	Galactose mutarotase-like
Shewana3_2514	SSF81296	E set domains
Shewana3_2516	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2517	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_2518	SSF53383	PLP-dependent transferases
Shewana3_2519	SSF102114	Radical SAM enzymes
Shewana3_2520	SSF53383	PLP-dependent transferases
Shewana3_2521	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_2522	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_2522	SSF52172	CheY-like
Shewana3_2522	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_2522	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_2523	SSF56801	Acetyl-CoA synthetase-like
Shewana3_2524	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2524	SSF57829	Zn-binding ribosomal proteins
Shewana3_2525	SSF52833	Thioredoxin-like
Shewana3_2526	SSF56935	Porins
Shewana3_2529	SSF48452	TPR-like
Shewana3_2530	SSF103088	OmpA-like
Shewana3_2531	SSF52964	TolB, N-terminal domain
Shewana3_2531	SSF69304	Tricorn protease N-terminal domain
Shewana3_2532	SSF74653	TolA/TonB C-terminal domain
Shewana3_2535	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shewana3_2536	SSF50993	Peptidase/esterase 'gauge' domain
Shewana3_2536	SSF53474	alpha/beta-Hydrolases
Shewana3_2537	SSF51905	FAD/NAD(P)-binding domain
Shewana3_2538	SSF46785	"Winged helix" DNA-binding domain
Shewana3_2539	SSF103088	OmpA-like
Shewana3_2540	SSF53098	Ribonuclease H-like
Shewana3_2541	SSF52833	Thioredoxin-like
Shewana3_2543	SSF55073	Nucleotide cyclase
Shewana3_2544	SSF53271	PRTase-like
Shewana3_2545	SSF55326	PurM N-terminal domain-like
Shewana3_2545	SSF56042	PurM C-terminal domain-like
Shewana3_2546	SSF53328	Formyltransferase
Shewana3_2547	SSF56784	HAD-like
Shewana3_2548	SSF52025	PA domain
Shewana3_2548	SSF53187	Zn-dependent exopeptidases
Shewana3_2549	SSF52402	Adenine nucleotide alpha hydrolases-like
Shewana3_2549	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Shewana3_2550	SSF52151	FabD/lysophospholipase-like
Shewana3_2551	SSF56935	Porins
Shewana3_2552	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Shewana3_2552	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Shewana3_2553	SSF74650	Galactose mutarotase-like
Shewana3_2554	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Shewana3_2554	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_2555	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shewana3_2557	SSF53901	Thiolase-like
Shewana3_2558	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_2559	SSF52151	FabD/lysophospholipase-like
Shewana3_2559	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
Shewana3_2560	SSF53901	Thiolase-like
Shewana3_2561	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Shewana3_2562	SSF57829	Zn-binding ribosomal proteins
Shewana3_2564	SSF52972	ITPase-like
Shewana3_2565	SSF56784	HAD-like
Shewana3_2566	SSF55120	Pseudouridine synthase
Shewana3_2566	SSF55174	Alpha-L RNA-binding motif
Shewana3_2567	SSF50249	Nucleic acid-binding proteins
Shewana3_2568	SSF52091	SpoIIaa-like
Shewana3_2569	SSF50249	Nucleic acid-binding proteins
Shewana3_2570	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_2572	SSF53098	Ribonuclease H-like
Shewana3_2573	SSF53927	Cytidine deaminase-like
Shewana3_2575	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Shewana3_2577	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Shewana3_2579	SSF52833	Thioredoxin-like
Shewana3_2582	SSF158997	Trm112p-like
Shewana3_2583	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2584	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2584	SSF90123	ABC transporter transmembrane region
Shewana3_2585	SSF56281	Metallo-hydrolase/oxidoreductase
Shewana3_2589	SSF141371	PilZ domain-like
Shewana3_2590	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2593	SSF55781	GAF domain-like
Shewana3_2593	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_2594	SSF52172	CheY-like
Shewana3_2597	SSF50952	Soluble quinoprotein glucose dehydrogenase
Shewana3_2600	SSF142695	RibA-like
Shewana3_2602	SSF102114	Radical SAM enzymes
Shewana3_2603	SSF51998	PFL-like glycyl radical enzymes
Shewana3_2605	SSF52151	FabD/lysophospholipase-like
Shewana3_2606	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2610	SSF51261	Duplicated hybrid motif
Shewana3_2611	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2612	SSF56300	Metallo-dependent phosphatases
Shewana3_2614	SSF46785	"Winged helix" DNA-binding domain
Shewana3_2614	SSF53850	Periplasmic binding protein-like II
Shewana3_2615	SSF89946	Hypothetical protein VC0424
Shewana3_2616	SSF55174	Alpha-L RNA-binding motif
Shewana3_2617	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_2618	SSF54534	FKBP-like
Shewana3_2620	SSF55073	Nucleotide cyclase
Shewana3_2621	SSF48452	TPR-like
Shewana3_2622	SSF74653	TolA/TonB C-terminal domain
Shewana3_2627	SSF56935	Porins
Shewana3_2628	SSF56935	Porins
Shewana3_2629	SSF53098	Ribonuclease H-like
Shewana3_2629	SSF56672	DNA/RNA polymerases
Shewana3_2630	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2634	SSF52768	Arginase/deacetylase
Shewana3_2636	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2637	SSF46689	Homeodomain-like
Shewana3_2637	SSF53041	Resolvase-like
Shewana3_2638	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2639	SSF53098	Ribonuclease H-like
Shewana3_2641	SSF56349	DNA breaking-rejoining enzymes
Shewana3_2642	SSF47781	RuvA domain 2-like
Shewana3_2643	SSF53383	PLP-dependent transferases
Shewana3_2649	SSF46689	Homeodomain-like
Shewana3_2649	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2650	SSF53850	Periplasmic binding protein-like II
Shewana3_2651	SSF161098	MetI-like
Shewana3_2652	SSF161098	MetI-like
Shewana3_2653	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2654	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2656	SSF50331	MOP-like
Shewana3_2657	SSF109998	Triger factor/SurA peptide-binding domain-like
Shewana3_2657	SSF54534	FKBP-like
Shewana3_2658	SSF47729	IHF-like DNA-binding proteins
Shewana3_2659	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2659	SSF54211	Ribosomal protein S5 domain 2-like
Shewana3_2659	SSF88697	PUA domain-like
Shewana3_2660	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2660	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Shewana3_2661	SSF52096	ClpP/crotonase
Shewana3_2662	SSF102735	Trigger factor ribosome-binding domain
Shewana3_2662	SSF109998	Triger factor/SurA peptide-binding domain-like
Shewana3_2662	SSF54534	FKBP-like
Shewana3_2663	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_2663	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Shewana3_2664	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Shewana3_2664	SSF52374	Nucleotidylyl transferase
Shewana3_2665	SSF50891	Cyclophilin-like
Shewana3_2666	SSF56300	Metallo-dependent phosphatases
Shewana3_2667	SSF47240	Ferritin-like
Shewana3_2669	SSF50715	Ribosomal protein L25-like
Shewana3_2669	SSF52374	Nucleotidylyl transferase
Shewana3_2670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2671	SSF50037	C-terminal domain of transcriptional repressors
Shewana3_2672	SSF48695	Multiheme cytochromes
Shewana3_2674	SSF48695	Multiheme cytochromes
Shewana3_2675	SSF48695	Multiheme cytochromes
Shewana3_2676	SSF48695	Multiheme cytochromes
Shewana3_2677	SSF48695	Multiheme cytochromes
Shewana3_2678	SSF56935	Porins
Shewana3_2680	SSF52141	Uracil-DNA glycosylase-like
Shewana3_2681	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shewana3_2683	SSF56634	Heme-dependent catalase-like
Shewana3_2685	SSF110738	Glycerate kinase I
Shewana3_2686	SSF53383	PLP-dependent transferases
Shewana3_2687	SSF52113	BRCT domain
Shewana3_2688	SSF54427	NTF2-like
Shewana3_2690	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_2691	SSF46689	Homeodomain-like
Shewana3_2691	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
Shewana3_2691	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
Shewana3_2692	SSF51161	Trimeric LpxA-like enzymes
Shewana3_2693	SSF46689	Homeodomain-like
Shewana3_2693	SSF51215	Regulatory protein AraC
Shewana3_2696	SSF103473	MFS general substrate transporter
Shewana3_2697	SSF51338	Composite domain of metallo-dependent hydrolases
Shewana3_2697	SSF51556	Metallo-dependent hydrolases
Shewana3_2698	SSF53067	Actin-like ATPase domain
Shewana3_2699	SSF53697	SIS domain
Shewana3_2700	SSF51569	Aldolase
Shewana3_2701	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_2702	SSF100950	NagB/RpiA/CoA transferase-like
Shewana3_2702	SSF46785	"Winged helix" DNA-binding domain
Shewana3_2703	SSF56935	Porins
Shewana3_2704	SSF46785	"Winged helix" DNA-binding domain
Shewana3_2705	SSF55136	Probable bacterial effector-binding domain
Shewana3_2706	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Shewana3_2707	SSF53738	Phosphoglucomutase, first 3 domains
Shewana3_2707	SSF55957	Phosphoglucomutase, C-terminal domain
Shewana3_2712	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_2713	SSF56801	Acetyl-CoA synthetase-like
Shewana3_2714	SSF53474	alpha/beta-Hydrolases
Shewana3_2715	SSF53901	Thiolase-like
Shewana3_2716	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_2721	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Shewana3_2722	SSF46785	"Winged helix" DNA-binding domain
Shewana3_2722	SSF53850	Periplasmic binding protein-like II
Shewana3_2723	SSF103481	Multidrug resistance efflux transporter EmrE
Shewana3_2724	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_2731	SSF109755	PhoU-like
Shewana3_2732	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2733	SSF161098	MetI-like
Shewana3_2734	SSF161098	MetI-like
Shewana3_2734	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
Shewana3_2735	SSF55021	ACT-like
Shewana3_2736	SSF103481	Multidrug resistance efflux transporter EmrE
Shewana3_2737	SSF53474	alpha/beta-Hydrolases
Shewana3_2740	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Shewana3_2745	SSF52743	Subtilisin-like
Shewana3_2747	SSF100950	NagB/RpiA/CoA transferase-like
Shewana3_2749	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2750	SSF111369	HlyD-like secretion proteins
Shewana3_2751	SSF46689	Homeodomain-like
Shewana3_2753	SSF53474	alpha/beta-Hydrolases
Shewana3_2755	SSF46894	C-terminal effector domain of the bipartite response regulators
Shewana3_2755	SSF48452	TPR-like
Shewana3_2755	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2756	SSF49503	Cupredoxins
Shewana3_2757	SSF55073	Nucleotide cyclase
Shewana3_2757	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_2758	SSF49899	Concanavalin A-like lectins/glucanases
Shewana3_2758	SSF56176	FAD-binding/transporter-associated domain-like
Shewana3_2759	SSF103481	Multidrug resistance efflux transporter EmrE
Shewana3_2760	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2761	SSF55008	HMA, heavy metal-associated domain
Shewana3_2761	SSF56784	HAD-like
Shewana3_2761	SSF81653	Calcium ATPase, transduction domain A
Shewana3_2761	SSF81665	Calcium ATPase, transmembrane domain M
Shewana3_2762	SSF46955	Putative DNA-binding domain
Shewana3_2763	SSF53474	alpha/beta-Hydrolases
Shewana3_2763	SSF82171	DPP6 N-terminal domain-like
Shewana3_2765	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_2766	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Shewana3_2766	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_2767	SSF52096	ClpP/crotonase
Shewana3_2768	SSF52096	ClpP/crotonase
Shewana3_2769	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Shewana3_2769	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Shewana3_2770	SSF53720	ALDH-like
Shewana3_2771	SSF53901	Thiolase-like
Shewana3_2772	SSF52317	Class I glutamine amidotransferase-like
Shewana3_2774	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_2775	SSF56925	OMPA-like
Shewana3_2777	SSF47616	GST C-terminal domain-like
Shewana3_2777	SSF52833	Thioredoxin-like
Shewana3_2778	SSF56529	FAH
Shewana3_2779	SSF46689	Homeodomain-like
Shewana3_2779	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2779	SSF55021	ACT-like
Shewana3_2780	SSF55248	PCD-like
Shewana3_2781	SSF56534	Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
Shewana3_2782	SSF53448	Nucleotide-diphospho-sugar transferases
Shewana3_2783	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_2784	SSF54862	4Fe-4S ferredoxins
Shewana3_2786	SSF46785	"Winged helix" DNA-binding domain
Shewana3_2786	SSF53850	Periplasmic binding protein-like II
Shewana3_2787	SSF48695	Multiheme cytochromes
Shewana3_2790	SSF53067	Actin-like ATPase domain
Shewana3_2791	SSF56655	Carbohydrate phosphatase
Shewana3_2793	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_2794	SSF89550	PHP domain-like
Shewana3_2795	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2797	SSF116726	TrkA C-terminal domain-like
Shewana3_2797	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_2798	SSF55073	Nucleotide cyclase
Shewana3_2799	SSF52402	Adenine nucleotide alpha hydrolases-like
Shewana3_2799	SSF56037	PheT/TilS domain
Shewana3_2799	SSF82829	MesJ substrate recognition domain-like
Shewana3_2800	SSF160975	AF1531-like
Shewana3_2800	SSF89550	PHP domain-like
Shewana3_2801	SSF53098	Ribonuclease H-like
Shewana3_2802	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Shewana3_2803	SSF51161	Trimeric LpxA-like enzymes
Shewana3_2804	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shewana3_2805	SSF51161	Trimeric LpxA-like enzymes
Shewana3_2806	SSF111384	OmpH-like
Shewana3_2808	SSF50156	PDZ domain-like
Shewana3_2809	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_2809	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Shewana3_2809	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
Shewana3_2811	SSF64005	Undecaprenyl diphosphate synthase
Shewana3_2812	SSF55194	Ribosome recycling factor, RRF
Shewana3_2813	SSF53633	Carbamate kinase-like
Shewana3_2814	SSF46934	UBA-like
Shewana3_2814	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
Shewana3_2815	SSF52313	Ribosomal protein S2
Shewana3_2816	SSF55920	Creatinase/aminopeptidase
Shewana3_2817	SSF55021	ACT-like
Shewana3_2817	SSF81301	Nucleotidyltransferase
Shewana3_2817	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
Shewana3_2817	SSF81891	Poly A polymerase C-terminal region-like
Shewana3_2818	SSF51161	Trimeric LpxA-like enzymes
Shewana3_2820	SSF109604	HD-domain/PDEase-like
Shewana3_2820	SSF54631	CBS-domain pair
Shewana3_2820	SSF55781	GAF domain-like
Shewana3_2821	SSF53328	Formyltransferase
Shewana3_2821	SSF55021	ACT-like
Shewana3_2822	SSF55604	Glucose permease domain IIB
Shewana3_2823	SSF52218	Flavoproteins
Shewana3_2824	SSF55120	Pseudouridine synthase
Shewana3_2825	SSF158452	YqcC-like
Shewana3_2829	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_2835	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Shewana3_2838	SSF56214	4'-phosphopantetheinyl transferase
Shewana3_2840	SSF47336	ACP-like
Shewana3_2840	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_2840	SSF52151	FabD/lysophospholipase-like
Shewana3_2840	SSF53901	Thiolase-like
Shewana3_2840	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
Shewana3_2841	SSF52151	FabD/lysophospholipase-like
Shewana3_2842	SSF53901	Thiolase-like
Shewana3_2842	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shewana3_2843	SSF51395	FMN-linked oxidoreductases
Shewana3_2845	SSF47413	lambda repressor-like DNA-binding domains
Shewana3_2846	SSF53098	Ribonuclease H-like
Shewana3_2848	SSF111331	NAD kinase/diacylglycerol kinase-like
Shewana3_2848	SSF52799	(Phosphotyrosine protein) phosphatases II
Shewana3_2849	SSF46689	Homeodomain-like
Shewana3_2849	SSF52172	CheY-like
Shewana3_2849	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2852	SSF159238	SO1590-like
Shewana3_2856	SSF51206	cAMP-binding domain-like
Shewana3_2857	SSF56529	FAH
Shewana3_2858	SSF53187	Zn-dependent exopeptidases
Shewana3_2859	SSF46785	"Winged helix" DNA-binding domain
Shewana3_2860	SSF103473	MFS general substrate transporter
Shewana3_2861	SSF82057	Prokaryotic SH3-related domain
Shewana3_2862	SSF56935	Porins
Shewana3_2864	SSF46689	Homeodomain-like
Shewana3_2864	SSF48498	Tetracyclin repressor-like, C-terminal domain
Shewana3_2865	SSF47616	GST C-terminal domain-like
Shewana3_2865	SSF52833	Thioredoxin-like
Shewana3_2866	SSF47616	GST C-terminal domain-like
Shewana3_2866	SSF52833	Thioredoxin-like
Shewana3_2867	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_2869	SSF160104	Acetoacetate decarboxylase-like
Shewana3_2869	SSF51905	FAD/NAD(P)-binding domain
Shewana3_2870	SSF55073	Nucleotide cyclase
Shewana3_2871	SSF103481	Multidrug resistance efflux transporter EmrE
Shewana3_2873	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_2874	SSF158791	MgtE N-terminal domain-like
Shewana3_2874	SSF161093	MgtE membrane domain-like
Shewana3_2874	SSF54631	CBS-domain pair
Shewana3_2875	SSF52833	Thioredoxin-like
Shewana3_2876	SSF48371	ARM repeat
Shewana3_2876	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shewana3_2876	SSF63737	Leukotriene A4 hydrolase N-terminal domain
Shewana3_2877	SSF53850	Periplasmic binding protein-like II
Shewana3_2878	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_2878	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_2878	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_2879	SSF46894	C-terminal effector domain of the bipartite response regulators
Shewana3_2879	SSF52172	CheY-like
Shewana3_2880	SSF56935	Porins
Shewana3_2882	SSF50156	PDZ domain-like
Shewana3_2883	SSF48452	TPR-like
Shewana3_2884	SSF55073	Nucleotide cyclase
Shewana3_2885	SSF102405	MCP/YpsA-like
Shewana3_2886	SSF47807	5' to 3' exonuclease, C-terminal subdomain
Shewana3_2886	SSF88723	PIN domain-like
Shewana3_2888	SSF103032	Hypothetical protein YwqG
Shewana3_2889	SSF53474	alpha/beta-Hydrolases
Shewana3_2889	SSF82171	DPP6 N-terminal domain-like
Shewana3_2890	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Shewana3_2891	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_2893	SSF53474	alpha/beta-Hydrolases
Shewana3_2894	SSF46785	"Winged helix" DNA-binding domain
Shewana3_2894	SSF53850	Periplasmic binding protein-like II
Shewana3_2896	SSF143437	THUMP domain-like
Shewana3_2896	SSF52402	Adenine nucleotide alpha hydrolases-like
Shewana3_2896	SSF52821	Rhodanese/Cell cycle control phosphatase
Shewana3_2897	SSF103088	OmpA-like
Shewana3_2899	SSF116842	XseB-like
Shewana3_2900	SSF48576	Terpenoid synthases
Shewana3_2901	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Shewana3_2901	SSF52922	TK C-terminal domain-like
Shewana3_2902	SSF51064	Head domain of nucleotide exchange factor GrpE
Shewana3_2902	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
Shewana3_2903	SSF111331	NAD kinase/diacylglycerol kinase-like
Shewana3_2905	SSF46548	alpha-helical ferredoxin
Shewana3_2905	SSF55103	FAD-linked oxidases, C-terminal domain
Shewana3_2905	SSF56176	FAD-binding/transporter-associated domain-like
Shewana3_2907	SSF100950	NagB/RpiA/CoA transferase-like
Shewana3_2907	SSF46548	alpha-helical ferredoxin
Shewana3_2908	SSF100950	NagB/RpiA/CoA transferase-like
Shewana3_2912	SSF111369	HlyD-like secretion proteins
Shewana3_2914	SSF81324	Voltage-gated potassium channels
Shewana3_2915	SSF56349	DNA breaking-rejoining enzymes
Shewana3_2919	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2924	SSF103473	MFS general substrate transporter
Shewana3_2926	SSF53850	Periplasmic binding protein-like II
Shewana3_2927	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2928	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2929	SSF141868	EAL domain-like
Shewana3_2929	SSF55073	Nucleotide cyclase
Shewana3_2929	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_2930	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Shewana3_2931	SSF51161	Trimeric LpxA-like enzymes
Shewana3_2931	SSF53448	Nucleotide-diphospho-sugar transferases
Shewana3_2932	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Shewana3_2933	SSF51011	Glycosyl hydrolase domain
Shewana3_2933	SSF51445	(Trans)glycosidases
Shewana3_2933	SSF81296	E set domains
Shewana3_2934	SSF51011	Glycosyl hydrolase domain
Shewana3_2934	SSF51445	(Trans)glycosidases
Shewana3_2934	SSF81296	E set domains
Shewana3_2935	SSF51445	(Trans)glycosidases
Shewana3_2936	SSF50891	Cyclophilin-like
Shewana3_2937	SSF46785	"Winged helix" DNA-binding domain
Shewana3_2938	SSF56796	Dehydroquinate synthase-like
Shewana3_2941	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shewana3_2942	SSF51621	Phosphoenolpyruvate/pyruvate domain
Shewana3_2943	SSF51645	Malate synthase G
Shewana3_2944	SSF56935	Porins
Shewana3_2945	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_2946	SSF48452	TPR-like
Shewana3_2946	SSF55073	Nucleotide cyclase
Shewana3_2947	SSF48076	LigA subunit of an aromatic-ring-opening dioxygenase LigAB
Shewana3_2948	SSF53790	Tetrapyrrole methylase
Shewana3_2950	SSF54285	MoaD/ThiS
Shewana3_2951	SSF55961	Bet v1-like
Shewana3_2952	SSF74982	Small protein B (SmpB)
Shewana3_2953	SSF56349	DNA breaking-rejoining enzymes
Shewana3_2959	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2960	SSF116734	DNA methylase specificity domain
Shewana3_2961	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_2962	SSF140931	Fic-like
Shewana3_2963	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2965	SSF82185	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
Shewana3_2967	SSF55008	HMA, heavy metal-associated domain
Shewana3_2969	SSF54001	Cysteine proteinases
Shewana3_2971	SSF55298	YjgF-like
Shewana3_2974	SSF50985	RCC1/BLIP-II
Shewana3_2976	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shewana3_2977	SSF53927	Cytidine deaminase-like
Shewana3_2980	SSF46689	Homeodomain-like
Shewana3_2980	SSF48498	Tetracyclin repressor-like, C-terminal domain
Shewana3_2983	SSF54534	FKBP-like
Shewana3_2984	SSF49299	PKD domain
Shewana3_2984	SSF51055	Carbohydrate binding domain
Shewana3_2984	SSF51445	(Trans)glycosidases
Shewana3_2984	SSF54556	Chitinase insertion domain
Shewana3_2984	SSF81296	E set domains
Shewana3_2985	SSF53067	Actin-like ATPase domain
Shewana3_2986	SSF53092	Creatinase/prolidase N-terminal domain
Shewana3_2986	SSF55920	Creatinase/aminopeptidase
Shewana3_2987	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_2987	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_2988	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_2989	SSF160935	VPA0735-like
Shewana3_2991	SSF52833	Thioredoxin-like
Shewana3_2993	SSF53850	Periplasmic binding protein-like II
Shewana3_2995	SSF52317	Class I glutamine amidotransferase-like
Shewana3_2996	SSF117892	Band 7/SPFH domain
Shewana3_2998	SSF75169	DsrEFH-like
Shewana3_2999	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shewana3_3000	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_3006	SSF52949	Macro domain-like
Shewana3_3006	SSF53187	Zn-dependent exopeptidases
Shewana3_3007	SSF48600	Chorismate mutase II
Shewana3_3007	SSF51569	Aldolase
Shewana3_3007	SSF53850	Periplasmic binding protein-like II
Shewana3_3007	SSF55021	ACT-like
Shewana3_3010	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Shewana3_3010	SSF54292	2Fe-2S ferredoxin-like
Shewana3_3010	SSF63380	Riboflavin synthase domain-like
Shewana3_3011	SSF56821	Prismane protein-like
Shewana3_3012	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Shewana3_3012	SSF48600	Chorismate mutase II
Shewana3_3012	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_3013	SSF51569	Aldolase
Shewana3_3014	SSF50104	Translation proteins SH3-like domain
Shewana3_3015	SSF75217	alpha/beta knot
Shewana3_3016	SSF50346	PRC-barrel domain
Shewana3_3016	SSF50447	Translation proteins
Shewana3_3017	SSF54565	Ribosomal protein S16
Shewana3_3018	SSF47446	Signal peptide-binding domain
Shewana3_3018	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3020	SSF54631	CBS-domain pair
Shewana3_3020	SSF56176	FAD-binding/transporter-associated domain-like
Shewana3_3022	SSF56214	4'-phosphopantetheinyl transferase
Shewana3_3023	SSF63892	Pyridoxine 5'-phosphate synthase
Shewana3_3024	SSF50249	Nucleic acid-binding proteins
Shewana3_3025	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3025	SSF54814	Prokaryotic type KH domain (KH-domain type II)
Shewana3_3026	SSF54768	dsRNA-binding domain-like
Shewana3_3026	SSF69065	RNase III domain-like
Shewana3_3027	SSF51306	LexA/Signal peptidase
Shewana3_3028	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3028	SSF54980	EF-G C-terminal domain-like
Shewana3_3031	SSF89069	N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
Shewana3_3032	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Shewana3_3032	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Shewana3_3033	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
Shewana3_3033	SSF51905	FAD/NAD(P)-binding domain
Shewana3_3033	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Shewana3_3035	SSF109910	YgfY-like
Shewana3_3036	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3036	SSF53850	Periplasmic binding protein-like II
Shewana3_3039	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
Shewana3_3042	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
Shewana3_3042	SSF51621	Phosphoenolpyruvate/pyruvate domain
Shewana3_3042	SSF52009	Phosphohistidine domain
Shewana3_3042	SSF55781	GAF domain-like
Shewana3_3043	SSF55811	Nudix
Shewana3_3044	SSF52980	Restriction endonuclease-like
Shewana3_3045	SSF55073	Nucleotide cyclase
Shewana3_3046	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3046	SSF53850	Periplasmic binding protein-like II
Shewana3_3047	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Shewana3_3048	SSF102114	Radical SAM enzymes
Shewana3_3050	SSF51395	FMN-linked oxidoreductases
Shewana3_3050	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Shewana3_3050	SSF69336	Alpha subunit of glutamate synthase, C-terminal domain
Shewana3_3051	SSF46548	alpha-helical ferredoxin
Shewana3_3051	SSF51971	Nucleotide-binding domain
Shewana3_3052	SSF53167	Purine and uridine phosphorylases
Shewana3_3056	SSF54427	NTF2-like
Shewana3_3058	SSF52374	Nucleotidylyl transferase
Shewana3_3058	SSF55174	Alpha-L RNA-binding motif
Shewana3_3059	SSF51261	Duplicated hybrid motif
Shewana3_3060	SSF53067	Actin-like ATPase domain
Shewana3_3061	SSF46894	C-terminal effector domain of the bipartite response regulators
Shewana3_3061	SSF82171	DPP6 N-terminal domain-like
Shewana3_3062	SSF53474	alpha/beta-Hydrolases
Shewana3_3062	SSF82171	DPP6 N-terminal domain-like
Shewana3_3063	SSF56935	Porins
Shewana3_3064	SSF81338	Aquaporin-like
Shewana3_3067	SSF89360	HesB-like domain
Shewana3_3069	SSF81340	Clc chloride channel
Shewana3_3070	SSF53671	Aspartate/ornithine carbamoyltransferase
Shewana3_3071	SSF53383	PLP-dependent transferases
Shewana3_3075	SSF47090	PGBD-like
Shewana3_3075	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3076	SSF81301	Nucleotidyltransferase
Shewana3_3076	SSF81891	Poly A polymerase C-terminal region-like
Shewana3_3077	SSF58042	Outer membrane lipoprotein
Shewana3_3078	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_3080	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
Shewana3_3081	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Shewana3_3083	SSF53067	Actin-like ATPase domain
Shewana3_3085	SSF89095	GatB/YqeY motif
Shewana3_3086	SSF117023	DNA primase DnaG, C-terminal domain
Shewana3_3086	SSF56731	DNA primase core
Shewana3_3086	SSF57783	Zinc beta-ribbon
Shewana3_3087	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Shewana3_3087	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Shewana3_3088	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_3089	SSF103473	MFS general substrate transporter
Shewana3_3090	SSF51679	Bacterial luciferase-like
Shewana3_3091	SSF53383	PLP-dependent transferases
Shewana3_3092	SSF53720	ALDH-like
Shewana3_3093	SSF51905	FAD/NAD(P)-binding domain
Shewana3_3094	SSF161098	MetI-like
Shewana3_3095	SSF161098	MetI-like
Shewana3_3096	SSF50331	MOP-like
Shewana3_3096	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3097	SSF53850	Periplasmic binding protein-like II
Shewana3_3098	SSF54368	Glutamine synthetase, N-terminal domain
Shewana3_3098	SSF55931	Glutamine synthetase/guanido kinase
Shewana3_3099	SSF52317	Class I glutamine amidotransferase-like
Shewana3_3100	SSF47413	lambda repressor-like DNA-binding domains
Shewana3_3100	SSF51182	RmlC-like cupins
Shewana3_3101	SSF51905	FAD/NAD(P)-binding domain
Shewana3_3103	SSF52821	Rhodanese/Cell cycle control phosphatase
Shewana3_3104	SSF50685	Barwin-like endoglucanases
Shewana3_3105	SSF53720	ALDH-like
Shewana3_3106	SSF53383	PLP-dependent transferases
Shewana3_3107	SSF53720	ALDH-like
Shewana3_3108	SSF51182	RmlC-like cupins
Shewana3_3109	SSF56935	Porins
Shewana3_3110	SSF103473	MFS general substrate transporter
Shewana3_3112	SSF51338	Composite domain of metallo-dependent hydrolases
Shewana3_3112	SSF51556	Metallo-dependent hydrolases
Shewana3_3113	SSF53697	SIS domain
Shewana3_3114	SSF53067	Actin-like ATPase domain
Shewana3_3115	SSF49384	Carbohydrate-binding domain
Shewana3_3115	SSF51445	(Trans)glycosidases
Shewana3_3115	SSF55545	beta-N-acetylhexosaminidase-like domain
Shewana3_3115	SSF81296	E set domains
Shewana3_3116	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_3117	SSF53850	Periplasmic binding protein-like II
Shewana3_3120	SSF51905	FAD/NAD(P)-binding domain
Shewana3_3121	SSF56935	Porins
Shewana3_3122	SSF47413	lambda repressor-like DNA-binding domains
Shewana3_3122	SSF53822	Periplasmic binding protein-like I
Shewana3_3123	SSF51905	FAD/NAD(P)-binding domain
Shewana3_3124	SSF54913	GlnB-like
Shewana3_3125	SSF54523	Pili subunits
Shewana3_3126	SSF54523	Pili subunits
Shewana3_3128	SSF54523	Pili subunits
Shewana3_3129	SSF53300	vWA-like
Shewana3_3134	SSF54534	FKBP-like
Shewana3_3136	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Shewana3_3136	SSF50677	ValRS/IleRS/LeuRS editing domain
Shewana3_3136	SSF52374	Nucleotidylyl transferase
Shewana3_3137	SSF52374	Nucleotidylyl transferase
Shewana3_3137	SSF82114	Riboflavin kinase-like
Shewana3_3140	SSF46992	Ribosomal protein S20
Shewana3_3141	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3142	SSF53187	Zn-dependent exopeptidases
Shewana3_3145	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Shewana3_3146	SSF103088	OmpA-like
Shewana3_3146	SSF103647	TSP type-3 repeat
Shewana3_3146	SSF56925	OMPA-like
Shewana3_3147	SSF51569	Aldolase
Shewana3_3148	SSF53697	SIS domain
Shewana3_3152	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Shewana3_3152	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Shewana3_3153	SSF53300	vWA-like
Shewana3_3154	SSF52091	SpoIIaa-like
Shewana3_3155	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
Shewana3_3156	SSF51246	Rudiment single hybrid motif
Shewana3_3156	SSF52440	PreATP-grasp domain
Shewana3_3156	SSF56059	Glutathione synthetase ATP-binding domain-like
Shewana3_3157	SSF55073	Nucleotide cyclase
Shewana3_3157	SSF55781	GAF domain-like
Shewana3_3158	SSF53955	Lysozyme-like
Shewana3_3160	SSF55931	Glutamine synthetase/guanido kinase
Shewana3_3161	SSF63411	LuxS/MPP-like metallohydrolase
Shewana3_3163	SSF118215	Proton glutamate symport protein
Shewana3_3165	SSF51230	Single hybrid motif
Shewana3_3165	SSF51569	Aldolase
Shewana3_3165	SSF89000	post-HMGL domain-like
Shewana3_3169	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3169	SSF81923	Double Clp-N motif
Shewana3_3170	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
Shewana3_3171	SSF55120	Pseudouridine synthase
Shewana3_3171	SSF55174	Alpha-L RNA-binding motif
Shewana3_3172	SSF48452	TPR-like
Shewana3_3173	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_3174	SSF46458	Globin-like
Shewana3_3174	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Shewana3_3174	SSF63380	Riboflavin synthase domain-like
Shewana3_3175	SSF55120	Pseudouridine synthase
Shewana3_3175	SSF55174	Alpha-L RNA-binding motif
Shewana3_3176	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3177	SSF52218	Flavoproteins
Shewana3_3178	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Shewana3_3184	SSF52172	CheY-like
Shewana3_3185	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_3185	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_3188	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Shewana3_3189	SSF53850	Periplasmic binding protein-like II
Shewana3_3190	SSF161098	MetI-like
Shewana3_3191	SSF161098	MetI-like
Shewana3_3192	SSF50331	MOP-like
Shewana3_3192	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3193	SSF111369	HlyD-like secretion proteins
Shewana3_3196	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3197	SSF51246	Rudiment single hybrid motif
Shewana3_3197	SSF52440	PreATP-grasp domain
Shewana3_3197	SSF56059	Glutathione synthetase ATP-binding domain-like
Shewana3_3199	SSF48452	TPR-like
Shewana3_3200	SSF143422	Transposase IS200-like
Shewana3_3201	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_3201	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Shewana3_3202	SSF56925	OMPA-like
Shewana3_3203	SSF158682	TerB-like
Shewana3_3203	SSF46565	Chaperone J-domain
Shewana3_3204	SSF53448	Nucleotide-diphospho-sugar transferases
Shewana3_3205	SSF56112	Protein kinase-like (PK-like)
Shewana3_3207	SSF109998	Triger factor/SurA peptide-binding domain-like
Shewana3_3207	SSF54534	FKBP-like
Shewana3_3208	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Shewana3_3209	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_3210	SSF110069	ApaG-like
Shewana3_3211	SSF56300	Metallo-dependent phosphatases
Shewana3_3212	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_3214	SSF53597	Dihydrofolate reductase-like
Shewana3_3217	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3217	SSF82051	Obg GTP-binding protein N-terminal domain
Shewana3_3218	SSF110324	Ribosomal L27 protein-like
Shewana3_3219	SSF141091	L21p-like
Shewana3_3220	SSF48576	Terpenoid synthases
Shewana3_3221	SSF52141	Uracil-DNA glycosylase-like
Shewana3_3225	SSF53474	alpha/beta-Hydrolases
Shewana3_3226	SSF52833	Thioredoxin-like
Shewana3_3227	SSF46689	Homeodomain-like
Shewana3_3227	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3227	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_3228	SSF54862	4Fe-4S ferredoxins
Shewana3_3230	SSF55920	Creatinase/aminopeptidase
Shewana3_3231	SSF56801	Acetyl-CoA synthetase-like
Shewana3_3232	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3232	SSF90123	ABC transporter transmembrane region
Shewana3_3233	SSF50475	FMN-binding split barrel
Shewana3_3234	SSF144064	Heme iron utilization protein-like
Shewana3_3235	SSF56935	Porins
Shewana3_3236	SSF74653	TolA/TonB C-terminal domain
Shewana3_3239	SSF53807	"Helical backbone" metal receptor
Shewana3_3240	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Shewana3_3241	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3244	SSF51905	FAD/NAD(P)-binding domain
Shewana3_3246	SSF48452	TPR-like
Shewana3_3247	SSF53850	Periplasmic binding protein-like II
Shewana3_3248	SSF52402	Adenine nucleotide alpha hydrolases-like
Shewana3_3249	SSF52402	Adenine nucleotide alpha hydrolases-like
Shewana3_3250	SSF52091	SpoIIaa-like
Shewana3_3251	SSF53720	ALDH-like
Shewana3_3252	SSF46689	Homeodomain-like
Shewana3_3256	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_3256	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_3257	SSF46689	Homeodomain-like
Shewana3_3257	SSF52172	CheY-like
Shewana3_3257	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3260	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3263	SSF51556	Metallo-dependent hydrolases
Shewana3_3265	SSF54427	NTF2-like
Shewana3_3269	SSF161084	MAPEG domain-like
Shewana3_3270	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_3271	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3272	SSF53807	"Helical backbone" metal receptor
Shewana3_3274	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3275	SSF52317	Class I glutamine amidotransferase-like
Shewana3_3275	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3276	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3278	SSF52733	Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
Shewana3_3279	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Shewana3_3280	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3281	SSF53254	Phosphoglycerate mutase-like
Shewana3_3282	SSF47644	Methionine synthase domain
Shewana3_3282	SSF51717	Dihydropteroate synthetase-like
Shewana3_3282	SSF52242	Cobalamin (vitamin B12)-binding domain
Shewana3_3282	SSF56507	Methionine synthase activation domain-like
Shewana3_3282	SSF82282	Homocysteine S-methyltransferase
Shewana3_3286	SSF53474	alpha/beta-Hydrolases
Shewana3_3288	SSF82185	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
Shewana3_3289	SSF82185	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
Shewana3_3291	SSF144091	Rhomboid-like
Shewana3_3292	SSF56601	beta-lactamase/transpeptidase-like
Shewana3_3293	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3293	SSF53850	Periplasmic binding protein-like II
Shewana3_3294	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Shewana3_3296	SSF50249	Nucleic acid-binding proteins
Shewana3_3296	SSF55681	Class II aaRS and biotin synthetases
Shewana3_3297	SSF75620	Release factor
Shewana3_3298	SSF46548	alpha-helical ferredoxin
Shewana3_3298	SSF50692	ADC-like
Shewana3_3298	SSF51971	Nucleotide-binding domain
Shewana3_3298	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shewana3_3298	SSF54292	2Fe-2S ferredoxin-like
Shewana3_3298	SSF54862	4Fe-4S ferredoxins
Shewana3_3299	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_3301	SSF52743	Subtilisin-like
Shewana3_3302	SSF48295	TrpR-like
Shewana3_3303	SSF53098	Ribonuclease H-like
Shewana3_3304	SSF52743	Subtilisin-like
Shewana3_3307	SSF52172	CheY-like
Shewana3_3308	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_3308	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_3309	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_3310	SSF51905	FAD/NAD(P)-binding domain
Shewana3_3310	SSF54373	FAD-linked reductases, C-terminal domain
Shewana3_3311	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3312	SSF82784	OsmC-like
Shewana3_3313	SSF52833	Thioredoxin-like
Shewana3_3316	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_3318	SSF48695	Multiheme cytochromes
Shewana3_3318	SSF51905	FAD/NAD(P)-binding domain
Shewana3_3318	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Shewana3_3319	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_3319	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Shewana3_3320	SSF53474	alpha/beta-Hydrolases
Shewana3_3322	SSF50182	Sm-like ribonucleoproteins
Shewana3_3323	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_3324	SSF52949	Macro domain-like
Shewana3_3324	SSF53187	Zn-dependent exopeptidases
Shewana3_3325	SSF52833	Thioredoxin-like
Shewana3_3326	SSF51905	FAD/NAD(P)-binding domain
Shewana3_3326	SSF52833	Thioredoxin-like
Shewana3_3327	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_3329	SSF64182	DHH phosphoesterases
Shewana3_3330	SSF52833	Thioredoxin-like
Shewana3_3330	SSF54423	DsbC/DsbG N-terminal domain-like
Shewana3_3331	SSF47823	lambda integrase-like, N-terminal domain
Shewana3_3331	SSF56349	DNA breaking-rejoining enzymes
Shewana3_3333	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_3334	SSF109604	HD-domain/PDEase-like
Shewana3_3334	SSF52172	CheY-like
Shewana3_3335	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Shewana3_3335	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_3335	SSF52172	CheY-like
Shewana3_3335	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_3335	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_3336	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3337	SSF111369	HlyD-like secretion proteins
Shewana3_3338	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shewana3_3338	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shewana3_3338	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shewana3_3339	SSF102114	Radical SAM enzymes
Shewana3_3340	SSF103190	Sensory domain-like
Shewana3_3340	SSF55073	Nucleotide cyclase
Shewana3_3340	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_3343	SSF46894	C-terminal effector domain of the bipartite response regulators
Shewana3_3344	SSF48695	Multiheme cytochromes
Shewana3_3347	SSF46894	C-terminal effector domain of the bipartite response regulators
Shewana3_3350	SSF51569	Aldolase
Shewana3_3351	SSF53748	Phosphoglycerate kinase
Shewana3_3352	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_3352	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Shewana3_3353	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Shewana3_3353	SSF52922	TK C-terminal domain-like
Shewana3_3354	SSF55973	S-adenosylmethionine synthetase
Shewana3_3357	SSF141868	EAL domain-like
Shewana3_3358	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_3359	SSF55073	Nucleotide cyclase
Shewana3_3362	SSF118215	Proton glutamate symport protein
Shewana3_3364	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_3366	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Shewana3_3367	SSF52972	ITPase-like
Shewana3_3368	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3368	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_3369	SSF56601	beta-lactamase/transpeptidase-like
Shewana3_3373	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Shewana3_3373	SSF54292	2Fe-2S ferredoxin-like
Shewana3_3373	SSF63380	Riboflavin synthase domain-like
Shewana3_3379	SSF51430	NAD(P)-linked oxidoreductase
Shewana3_3380	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Shewana3_3383	SSF49464	Carboxypeptidase regulatory domain-like
Shewana3_3383	SSF56935	Porins
Shewana3_3384	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3385	SSF51182	RmlC-like cupins
Shewana3_3390	SSF141523	L,D-transpeptidase catalytic domain-like
Shewana3_3392	SSF57783	Zinc beta-ribbon
Shewana3_3393	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3395	SSF51316	Mss4-like
Shewana3_3396	SSF51905	FAD/NAD(P)-binding domain
Shewana3_3398	SSF53474	alpha/beta-Hydrolases
Shewana3_3399	SSF118001	YehU-like
Shewana3_3400	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3401	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_3402	SSF53187	Zn-dependent exopeptidases
Shewana3_3404	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
Shewana3_3404	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Shewana3_3405	SSF52374	Nucleotidylyl transferase
Shewana3_3406	SSF81301	Nucleotidyltransferase
Shewana3_3406	SSF81891	Poly A polymerase C-terminal region-like
Shewana3_3407	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
Shewana3_3408	SSF51621	Phosphoenolpyruvate/pyruvate domain
Shewana3_3409	SSF52374	Nucleotidylyl transferase
Shewana3_3411	SSF49299	PKD domain
Shewana3_3411	SSF49785	Galactose-binding domain-like
Shewana3_3411	SSF52743	Subtilisin-like
Shewana3_3414	SSF46894	C-terminal effector domain of the bipartite response regulators
Shewana3_3416	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_3416	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Shewana3_3416	SSF55021	ACT-like
Shewana3_3417	SSF101790	Aminomethyltransferase beta-barrel domain
Shewana3_3417	SSF103025	Folate-binding domain
Shewana3_3418	SSF109604	HD-domain/PDEase-like
Shewana3_3418	SSF52172	CheY-like
Shewana3_3419	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Shewana3_3419	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_3419	SSF52172	CheY-like
Shewana3_3419	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_3419	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_3421	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3423	SSF159245	AttH-like
Shewana3_3424	SSF54523	Pili subunits
Shewana3_3425	SSF54523	Pili subunits
Shewana3_3430	SSF50692	ADC-like
Shewana3_3430	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shewana3_3431	SSF54862	4Fe-4S ferredoxins
Shewana3_3432	SSF54862	4Fe-4S ferredoxins
Shewana3_3433	SSF48695	Multiheme cytochromes
Shewana3_3435	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3435	SSF53850	Periplasmic binding protein-like II
Shewana3_3436	SSF50447	Translation proteins
Shewana3_3436	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3436	SSF54211	Ribosomal protein S5 domain 2-like
Shewana3_3436	SSF54980	EF-G C-terminal domain-like
Shewana3_3437	SSF53850	Periplasmic binding protein-like II
Shewana3_3437	SSF55073	Nucleotide cyclase
Shewana3_3438	SSF51230	Single hybrid motif
Shewana3_3438	SSF51246	Rudiment single hybrid motif
Shewana3_3438	SSF52096	ClpP/crotonase
Shewana3_3438	SSF52440	PreATP-grasp domain
Shewana3_3438	SSF56059	Glutathione synthetase ATP-binding domain-like
Shewana3_3439	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3439	SSF53850	Periplasmic binding protein-like II
Shewana3_3440	SSF56601	beta-lactamase/transpeptidase-like
Shewana3_3441	SSF53182	Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
Shewana3_3443	SSF54060	His-Me finger endonucleases
Shewana3_3444	SSF75217	alpha/beta knot
Shewana3_3444	SSF88697	PUA domain-like
Shewana3_3445	SSF52440	PreATP-grasp domain
Shewana3_3445	SSF56059	Glutathione synthetase ATP-binding domain-like
Shewana3_3446	SSF53649	Alkaline phosphatase-like
Shewana3_3447	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_3451	SSF63848	Cell-division inhibitor MinC, C-terminal domain
Shewana3_3454	SSF56954	Outer membrane efflux proteins (OEP)
Shewana3_3455	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3456	SSF111369	HlyD-like secretion proteins
Shewana3_3457	SSF53474	alpha/beta-Hydrolases
Shewana3_3458	SSF56935	Porins
Shewana3_3459	SSF46894	C-terminal effector domain of the bipartite response regulators
Shewana3_3459	SSF52172	CheY-like
Shewana3_3460	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_3460	SSF52172	CheY-like
Shewana3_3460	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_3460	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_3461	SSF103473	MFS general substrate transporter
Shewana3_3462	SSF53474	alpha/beta-Hydrolases
Shewana3_3464	SSF75304	Amidase signature (AS) enzymes
Shewana3_3465	SSF55909	Pentein
Shewana3_3466	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_3467	SSF100950	NagB/RpiA/CoA transferase-like
Shewana3_3468	SSF100950	NagB/RpiA/CoA transferase-like
Shewana3_3469	SSF51726	UROD/MetE-like
Shewana3_3470	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3470	SSF53850	Periplasmic binding protein-like II
Shewana3_3471	SSF109604	HD-domain/PDEase-like
Shewana3_3472	SSF56935	Porins
Shewana3_3474	SSF50985	RCC1/BLIP-II
Shewana3_3476	SSF53590	Nucleoside hydrolase
Shewana3_3477	SSF53613	Ribokinase-like
Shewana3_3478	SSF49503	Cupredoxins
Shewana3_3480	SSF51695	PLC-like phosphodiesterases
Shewana3_3481	SSF53271	PRTase-like
Shewana3_3482	SSF56300	Metallo-dependent phosphatases
Shewana3_3483	SSF54631	CBS-domain pair
Shewana3_3486	SSF53474	alpha/beta-Hydrolases
Shewana3_3487	SSF51182	RmlC-like cupins
Shewana3_3488	SSF55073	Nucleotide cyclase
Shewana3_3489	SSF82784	OsmC-like
Shewana3_3491	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_3495	SSF140453	EsxAB dimer-like
Shewana3_3496	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3499	SSF53383	PLP-dependent transferases
Shewana3_3500	SSF51230	Single hybrid motif
Shewana3_3501	SSF101790	Aminomethyltransferase beta-barrel domain
Shewana3_3501	SSF103025	Folate-binding domain
Shewana3_3502	SSF51905	FAD/NAD(P)-binding domain
Shewana3_3503	SSF51905	FAD/NAD(P)-binding domain
Shewana3_3504	SSF101327	YgfB-like
Shewana3_3505	SSF102829	Cell division protein ZapA-like
Shewana3_3506	SSF100950	NagB/RpiA/CoA transferase-like
Shewana3_3507	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_3509	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_3509	SSF56327	LDH C-terminal domain-like
Shewana3_3510	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3510	SSF55252	C-terminal domain of arginine repressor
Shewana3_3511	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_3512	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3512	SSF53850	Periplasmic binding protein-like II
Shewana3_3513	SSF54909	Dimeric alpha+beta barrel
Shewana3_3514	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Shewana3_3515	SSF50331	MOP-like
Shewana3_3515	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3516	SSF161098	MetI-like
Shewana3_3517	SSF53850	Periplasmic binding protein-like II
Shewana3_3519	SSF52833	Thioredoxin-like
Shewana3_3520	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Shewana3_3520	SSF63380	Riboflavin synthase domain-like
Shewana3_3522	SSF53254	Phosphoglycerate mutase-like
Shewana3_3523	SSF51395	FMN-linked oxidoreductases
Shewana3_3526	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3526	SSF90123	ABC transporter transmembrane region
Shewana3_3528	SSF51569	Aldolase
Shewana3_3529	SSF48452	TPR-like
Shewana3_3531	SSF111352	Ammonium transporter
Shewana3_3532	SSF54913	GlnB-like
Shewana3_3533	SSF52499	Isochorismatase-like hydrolases
Shewana3_3537	SSF46689	Homeodomain-like
Shewana3_3537	SSF51215	Regulatory protein AraC
Shewana3_3539	SSF53649	Alkaline phosphatase-like
Shewana3_3540	SSF53649	Alkaline phosphatase-like
Shewana3_3541	SSF56935	Porins
Shewana3_3542	SSF53850	Periplasmic binding protein-like II
Shewana3_3543	SSF55073	Nucleotide cyclase
Shewana3_3543	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_3544	SSF50249	Nucleic acid-binding proteins
Shewana3_3545	SSF52743	Subtilisin-like
Shewana3_3546	SSF52833	Thioredoxin-like
Shewana3_3547	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3549	SSF48113	Heme-dependent peroxidases
Shewana3_3552	SSF69118	AhpD-like
Shewana3_3553	SSF56784	HAD-like
Shewana3_3555	SSF48452	TPR-like
Shewana3_3555	SSF53300	vWA-like
Shewana3_3556	SSF53300	vWA-like
Shewana3_3558	SSF53300	vWA-like
Shewana3_3559	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3560	SSF102114	Radical SAM enzymes
Shewana3_3562	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3562	SSF53850	Periplasmic binding protein-like II
Shewana3_3565	SSF53098	Ribonuclease H-like
Shewana3_3567	SSF48592	GroEL equatorial domain-like
Shewana3_3567	SSF52029	GroEL apical domain-like
Shewana3_3567	SSF54849	GroEL-intermediate domain like
Shewana3_3568	SSF50129	GroES-like
Shewana3_3570	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3570	SSF53850	Periplasmic binding protein-like II
Shewana3_3571	SSF111369	HlyD-like secretion proteins
Shewana3_3572	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shewana3_3572	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shewana3_3572	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shewana3_3575	SSF54913	GlnB-like
Shewana3_3576	SSF52833	Thioredoxin-like
Shewana3_3576	SSF74863	Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
Shewana3_3577	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_3578	SSF54211	Ribosomal protein S5 domain 2-like
Shewana3_3578	SSF55060	GHMP Kinase, C-terminal domain
Shewana3_3579	SSF74650	Galactose mutarotase-like
Shewana3_3581	SSF50129	GroES-like
Shewana3_3581	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_3582	SSF81901	HCP-like
Shewana3_3583	SSF52058	L domain-like
Shewana3_3583	SSF56112	Protein kinase-like (PK-like)
Shewana3_3584	SSF53955	Lysozyme-like
Shewana3_3584	SSF54106	LysM domain
Shewana3_3586	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3586	SSF53850	Periplasmic binding protein-like II
Shewana3_3587	SSF103473	MFS general substrate transporter
Shewana3_3588	SSF63411	LuxS/MPP-like metallohydrolase
Shewana3_3590	SSF50249	Nucleic acid-binding proteins
Shewana3_3591	SSF103473	MFS general substrate transporter
Shewana3_3592	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3594	SSF53187	Zn-dependent exopeptidases
Shewana3_3595	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3597	SSF103473	MFS general substrate transporter
Shewana3_3598	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3598	SSF53850	Periplasmic binding protein-like II
Shewana3_3599	SSF51430	NAD(P)-linked oxidoreductase
Shewana3_3600	SSF56784	HAD-like
Shewana3_3601	SSF103481	Multidrug resistance efflux transporter EmrE
Shewana3_3602	SSF56529	FAH
Shewana3_3603	SSF74653	TolA/TonB C-terminal domain
Shewana3_3606	SSF46626	Cytochrome c
Shewana3_3607	SSF46626	Cytochrome c
Shewana3_3609	SSF111369	HlyD-like secretion proteins
Shewana3_3610	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3611	SSF103190	Sensory domain-like
Shewana3_3611	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_3612	SSF51730	FAD-linked oxidoreductase
Shewana3_3613	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_3613	SSF53633	Carbamate kinase-like
Shewana3_3613	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Shewana3_3614	SSF53383	PLP-dependent transferases
Shewana3_3615	SSF47598	Ribbon-helix-helix
Shewana3_3618	SSF54862	4Fe-4S ferredoxins
Shewana3_3619	SSF50692	ADC-like
Shewana3_3619	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shewana3_3620	SSF141571	Pentapeptide repeat-like
Shewana3_3622	SSF56104	SAICAR synthase-like
Shewana3_3627	SSF102114	Radical SAM enzymes
Shewana3_3629	SSF53850	Periplasmic binding protein-like II
Shewana3_3630	SSF56935	Porins
Shewana3_3631	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
Shewana3_3632	SSF158710	PSPTO4464-like
Shewana3_3633	SSF49373	Invasin/intimin cell-adhesion fragments
Shewana3_3635	SSF56925	OMPA-like
Shewana3_3639	SSF111369	HlyD-like secretion proteins
Shewana3_3640	SSF56954	Outer membrane efflux proteins (OEP)
Shewana3_3641	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
Shewana3_3642	SSF56317	Carbon-nitrogen hydrolase
Shewana3_3644	SSF50249	Nucleic acid-binding proteins
Shewana3_3645	SSF52972	ITPase-like
Shewana3_3648	SSF53067	Actin-like ATPase domain
Shewana3_3649	SSF49899	Concanavalin A-like lectins/glucanases
Shewana3_3651	SSF54523	Pili subunits
Shewana3_3652	SSF54523	Pili subunits
Shewana3_3653	SSF54523	Pili subunits
Shewana3_3655	SSF53098	Ribonuclease H-like
Shewana3_3656	SSF54523	Pili subunits
Shewana3_3657	SSF54523	Pili subunits
Shewana3_3660	SSF160246	EspE N-terminal domain-like
Shewana3_3660	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3661	SSF48452	TPR-like
Shewana3_3662	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3667	SSF53067	Actin-like ATPase domain
Shewana3_3668	SSF141868	EAL domain-like
Shewana3_3668	SSF55073	Nucleotide cyclase
Shewana3_3669	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_3669	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Shewana3_3670	SSF143800	L28p-like
Shewana3_3672	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3673	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Shewana3_3673	SSF52374	Nucleotidylyl transferase
Shewana3_3673	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
Shewana3_3674	SSF110997	Sporulation related repeat
Shewana3_3676	SSF117892	Band 7/SPFH domain
Shewana3_3677	SSF117892	Band 7/SPFH domain
Shewana3_3679	SSF111364	Tsx-like channel
Shewana3_3680	SSF53167	Purine and uridine phosphorylases
Shewana3_3682	SSF50621	Alanine racemase C-terminal domain-like
Shewana3_3682	SSF51419	PLP-binding barrel
Shewana3_3684	SSF50182	Sm-like ribonucleoproteins
Shewana3_3684	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
Shewana3_3684	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
Shewana3_3685	SSF81901	HCP-like
Shewana3_3686	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3686	SSF53850	Periplasmic binding protein-like II
Shewana3_3687	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_3688	SSF46626	Cytochrome c
Shewana3_3690	SSF48695	Multiheme cytochromes
Shewana3_3692	SSF88713	Glycoside hydrolase/deacetylase
Shewana3_3693	SSF54427	NTF2-like
Shewana3_3695	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3695	SSF53850	Periplasmic binding protein-like II
Shewana3_3696	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_3696	SSF53850	Periplasmic binding protein-like II
Shewana3_3696	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_3697	SSF52172	CheY-like
Shewana3_3698	SSF54523	Pili subunits
Shewana3_3699	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Shewana3_3700	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3704	SSF48173	Cryptochrome/photolyase FAD-binding domain
Shewana3_3705	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_3707	SSF46689	Homeodomain-like
Shewana3_3707	SSF52172	CheY-like
Shewana3_3708	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_3709	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_3710	SSF56300	Metallo-dependent phosphatases
Shewana3_3712	SSF55120	Pseudouridine synthase
Shewana3_3713	SSF88697	PUA domain-like
Shewana3_3714	SSF52151	FabD/lysophospholipase-like
Shewana3_3715	SSF56935	Porins
Shewana3_3716	SSF51197	Clavaminate synthase-like
Shewana3_3717	SSF64182	DHH phosphoesterases
Shewana3_3719	SSF53474	alpha/beta-Hydrolases
Shewana3_3720	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Shewana3_3721	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
Shewana3_3723	SSF89562	RraA-like
Shewana3_3724	SSF52768	Arginase/deacetylase
Shewana3_3725	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_3726	SSF55718	SCP-like
Shewana3_3727	SSF56112	Protein kinase-like (PK-like)
Shewana3_3732	SSF51556	Metallo-dependent hydrolases
Shewana3_3733	SSF55073	Nucleotide cyclase
Shewana3_3734	SSF51569	Aldolase
Shewana3_3735	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3735	SSF81767	Pre-protein crosslinking domain of SecA
Shewana3_3735	SSF81886	Helical scaffold and wing domains of SecA
Shewana3_3736	SSF51261	Duplicated hybrid motif
Shewana3_3738	SSF54211	Ribosomal protein S5 domain 2-like
Shewana3_3739	SSF52490	Tubulin nucleotide-binding domain-like
Shewana3_3739	SSF55307	Tubulin C-terminal domain-like
Shewana3_3740	SSF53067	Actin-like ATPase domain
Shewana3_3742	SSF51984	MurCD N-terminal domain
Shewana3_3742	SSF53244	MurD-like peptide ligases, peptide-binding domain
Shewana3_3742	SSF53623	MurD-like peptide ligases, catalytic domain
Shewana3_3743	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Shewana3_3745	SSF51984	MurCD N-terminal domain
Shewana3_3745	SSF53244	MurD-like peptide ligases, peptide-binding domain
Shewana3_3745	SSF53623	MurD-like peptide ligases, catalytic domain
Shewana3_3747	SSF53244	MurD-like peptide ligases, peptide-binding domain
Shewana3_3747	SSF53623	MurD-like peptide ligases, catalytic domain
Shewana3_3747	SSF63418	MurE/MurF N-terminal domain
Shewana3_3748	SSF53244	MurD-like peptide ligases, peptide-binding domain
Shewana3_3748	SSF53623	MurD-like peptide ligases, catalytic domain
Shewana3_3748	SSF63418	MurE/MurF N-terminal domain
Shewana3_3749	SSF56519	Penicillin binding protein dimerisation domain
Shewana3_3749	SSF56601	beta-lactamase/transpeptidase-like
Shewana3_3751	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_3751	SSF81799	Putative methyltransferase TM0872, insert domain
Shewana3_3752	SSF89447	AbrB/MazE/MraZ-like
Shewana3_3754	SSF54292	2Fe-2S ferredoxin-like
Shewana3_3756	SSF53067	Actin-like ATPase domain
Shewana3_3757	SSF56935	Porins
Shewana3_3758	SSF52016	LeuD/IlvD-like
Shewana3_3759	SSF53732	Aconitase iron-sulfur domain
Shewana3_3760	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Shewana3_3761	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
Shewana3_3761	SSF51569	Aldolase
Shewana3_3762	SSF48452	TPR-like
Shewana3_3762	SSF55073	Nucleotide cyclase
Shewana3_3763	SSF47819	HRDC-like
Shewana3_3763	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3764	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shewana3_3765	SSF103481	Multidrug resistance efflux transporter EmrE
Shewana3_3767	SSF53633	Carbamate kinase-like
Shewana3_3767	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_3768	SSF57829	Zn-binding ribosomal proteins
Shewana3_3769	SSF143800	L28p-like
Shewana3_3770	SSF102712	JAB1/MPN domain
Shewana3_3770	SSF47781	RuvA domain 2-like
Shewana3_3771	SSF102645	CoaB-like
Shewana3_3771	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Shewana3_3772	SSF51283	dUTPase-like
Shewana3_3773	SSF46689	Homeodomain-like
Shewana3_3774	SSF53474	alpha/beta-Hydrolases
Shewana3_3774	SSF82171	DPP6 N-terminal domain-like
Shewana3_3775	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Shewana3_3776	SSF53271	PRTase-like
Shewana3_3777	SSF54211	Ribosomal protein S5 domain 2-like
Shewana3_3777	SSF55666	Ribonuclease PH domain 2-like
Shewana3_3779	SSF56349	DNA breaking-rejoining enzymes
Shewana3_3785	SSF47162	Apolipoprotein
Shewana3_3786	SSF103088	OmpA-like
Shewana3_3788	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3788	SSF52980	Restriction endonuclease-like
Shewana3_3790	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3793	SSF116734	DNA methylase specificity domain
Shewana3_3794	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_3797	SSF56784	HAD-like
Shewana3_3800	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3800	SSF53850	Periplasmic binding protein-like II
Shewana3_3802	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3803	SSF47413	lambda repressor-like DNA-binding domains
Shewana3_3804	SSF140931	Fic-like
Shewana3_3805	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3806	SSF103473	MFS general substrate transporter
Shewana3_3807	SSF56112	Protein kinase-like (PK-like)
Shewana3_3808	SSF53448	Nucleotide-diphospho-sugar transferases
Shewana3_3810	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3811	SSF63562	RPB6/omega subunit-like
Shewana3_3812	SSF109604	HD-domain/PDEase-like
Shewana3_3812	SSF55021	ACT-like
Shewana3_3812	SSF81271	TGS-like
Shewana3_3812	SSF81301	Nucleotidyltransferase
Shewana3_3813	SSF55298	YjgF-like
Shewana3_3814	SSF56801	Acetyl-CoA synthetase-like
Shewana3_3816	SSF48452	TPR-like
Shewana3_3817	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_3818	SSF46894	C-terminal effector domain of the bipartite response regulators
Shewana3_3818	SSF52172	CheY-like
Shewana3_3819	SSF103032	Hypothetical protein YwqG
Shewana3_3820	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3820	SSF54211	Ribosomal protein S5 domain 2-like
Shewana3_3821	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Shewana3_3822	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Shewana3_3824	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3824	SSF48008	GntR ligand-binding domain-like
Shewana3_3825	SSF51621	Phosphoenolpyruvate/pyruvate domain
Shewana3_3826	SSF48256	Citrate synthase
Shewana3_3827	SSF52016	LeuD/IlvD-like
Shewana3_3827	SSF53732	Aconitase iron-sulfur domain
Shewana3_3828	SSF54506	Diaminopimelate epimerase-like
Shewana3_3829	SSF141868	EAL domain-like
Shewana3_3829	SSF50998	Quinoprotein alcohol dehydrogenase-like
Shewana3_3829	SSF55073	Nucleotide cyclase
Shewana3_3829	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_3829	SSF63829	Calcium-dependent phosphotriesterase
Shewana3_3830	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
Shewana3_3831	SSF52833	Thioredoxin-like
Shewana3_3832	SSF101744	Rof/RNase P subunit-like
Shewana3_3834	SSF55298	YjgF-like
Shewana3_3838	SSF52833	Thioredoxin-like
Shewana3_3839	SSF56112	Protein kinase-like (PK-like)
Shewana3_3844	SSF75169	DsrEFH-like
Shewana3_3848	SSF111369	HlyD-like secretion proteins
Shewana3_3849	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shewana3_3849	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shewana3_3849	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shewana3_3850	SSF46689	Homeodomain-like
Shewana3_3850	SSF48498	Tetracyclin repressor-like, C-terminal domain
Shewana3_3851	SSF55073	Nucleotide cyclase
Shewana3_3856	SSF53098	Ribonuclease H-like
Shewana3_3859	SSF47413	lambda repressor-like DNA-binding domains
Shewana3_3861	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3862	SSF53098	Ribonuclease H-like
Shewana3_3863	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3868	SSF46689	Homeodomain-like
Shewana3_3869	SSF49777	PEBP-like
Shewana3_3871	SSF52172	CheY-like
Shewana3_3871	SSF53383	PLP-dependent transferases
Shewana3_3871	SSF55904	Ornithine decarboxylase C-terminal domain
Shewana3_3873	SSF56935	Porins
Shewana3_3874	SSF102114	Radical SAM enzymes
Shewana3_3875	SSF161084	MAPEG domain-like
Shewana3_3879	SSF53790	Tetrapyrrole methylase
Shewana3_3880	SSF53822	Periplasmic binding protein-like I
Shewana3_3881	SSF52980	Restriction endonuclease-like
Shewana3_3882	SSF53697	SIS domain
Shewana3_3884	SSF103481	Multidrug resistance efflux transporter EmrE
Shewana3_3885	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3885	SSF53850	Periplasmic binding protein-like II
Shewana3_3886	SSF52374	Nucleotidylyl transferase
Shewana3_3887	SSF56784	HAD-like
Shewana3_3888	SSF51366	Ribulose-phoshate binding barrel
Shewana3_3891	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_3892	SSF110997	Sporulation related repeat
Shewana3_3892	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3893	SSF56796	Dehydroquinate synthase-like
Shewana3_3894	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3899	SSF53067	Actin-like ATPase domain
Shewana3_3900	SSF53955	Lysozyme-like
Shewana3_3900	SSF56601	beta-lactamase/transpeptidase-like
Shewana3_3901	SSF48557	L-aspartase-like
Shewana3_3902	SSF52402	Adenine nucleotide alpha hydrolases-like
Shewana3_3902	SSF69864	Argininosuccinate synthetase, C-terminal domain
Shewana3_3903	SSF53671	Aspartate/ornithine carbamoyltransferase
Shewana3_3904	SSF53633	Carbamate kinase-like
Shewana3_3905	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_3905	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Shewana3_3906	SSF51621	Phosphoenolpyruvate/pyruvate domain
Shewana3_3908	SSF142433	CinA-like
Shewana3_3908	SSF53218	Molybdenum cofactor biosynthesis proteins
Shewana3_3909	SSF53850	Periplasmic binding protein-like II
Shewana3_3910	SSF53927	Cytidine deaminase-like
Shewana3_3913	SSF54862	4Fe-4S ferredoxins
Shewana3_3914	SSF89155	TorD-like
Shewana3_3916	SSF50692	ADC-like
Shewana3_3916	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shewana3_3917	SSF54862	4Fe-4S ferredoxins
Shewana3_3918	SSF81342	Transmembrane di-heme cytochromes
Shewana3_3920	SSF50692	ADC-like
Shewana3_3920	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shewana3_3921	SSF54862	4Fe-4S ferredoxins
Shewana3_3922	SSF81342	Transmembrane di-heme cytochromes
Shewana3_3923	SSF56935	Porins
Shewana3_3924	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_3926	SSF102114	Radical SAM enzymes
Shewana3_3929	SSF56935	Porins
Shewana3_3930	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3930	SSF53850	Periplasmic binding protein-like II
Shewana3_3931	SSF52151	FabD/lysophospholipase-like
Shewana3_3932	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3932	SSF53850	Periplasmic binding protein-like II
Shewana3_3933	SSF103481	Multidrug resistance efflux transporter EmrE
Shewana3_3934	SSF75217	alpha/beta knot
Shewana3_3938	SSF53474	alpha/beta-Hydrolases
Shewana3_3938	SSF82171	DPP6 N-terminal domain-like
Shewana3_3939	SSF63411	LuxS/MPP-like metallohydrolase
Shewana3_3940	SSF63411	LuxS/MPP-like metallohydrolase
Shewana3_3941	SSF53187	Zn-dependent exopeptidases
Shewana3_3941	SSF55031	Bacterial exopeptidase dimerisation domain
Shewana3_3943	SSF52490	Tubulin nucleotide-binding domain-like
Shewana3_3943	SSF55307	Tubulin C-terminal domain-like
Shewana3_3944	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_3946	SSF141868	EAL domain-like
Shewana3_3946	SSF55073	Nucleotide cyclase
Shewana3_3946	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_3948	SSF103473	MFS general substrate transporter
Shewana3_3949	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3949	SSF53850	Periplasmic binding protein-like II
Shewana3_3950	SSF103190	Sensory domain-like
Shewana3_3950	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_3951	SSF90123	ABC transporter transmembrane region
Shewana3_3952	SSF81901	HCP-like
Shewana3_3955	SSF158682	TerB-like
Shewana3_3956	SSF109604	HD-domain/PDEase-like
Shewana3_3957	SSF74653	TolA/TonB C-terminal domain
Shewana3_3959	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3959	SSF54909	Dimeric alpha+beta barrel
Shewana3_3961	SSF54862	4Fe-4S ferredoxins
Shewana3_3962	SSF48695	Multiheme cytochromes
Shewana3_3964	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3964	SSF53850	Periplasmic binding protein-like II
Shewana3_3965	SSF52467	DHS-like NAD/FAD-binding domain
Shewana3_3965	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Shewana3_3966	SSF53474	alpha/beta-Hydrolases
Shewana3_3967	SSF51604	Enolase C-terminal domain-like
Shewana3_3967	SSF54826	Enolase N-terminal domain-like
Shewana3_3968	SSF56801	Acetyl-CoA synthetase-like
Shewana3_3969	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Shewana3_3969	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Shewana3_3971	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3972	SSF47364	Domain of the SRP/SRP receptor G-proteins
Shewana3_3972	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3973	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_3975	SSF46689	Homeodomain-like
Shewana3_3975	SSF52317	Class I glutamine amidotransferase-like
Shewana3_3976	SSF52499	Isochorismatase-like hydrolases
Shewana3_3977	SSF48695	Multiheme cytochromes
Shewana3_3982	SSF111369	HlyD-like secretion proteins
Shewana3_3983	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shewana3_3983	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shewana3_3983	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shewana3_3984	SSF55895	Ribonuclease Rh-like
Shewana3_3985	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_3986	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Shewana3_3988	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Shewana3_3989	SSF46785	"Winged helix" DNA-binding domain
Shewana3_3989	SSF51306	LexA/Signal peptidase
Shewana3_3990	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_3991	SSF46626	Cytochrome c
Shewana3_3991	SSF49503	Cupredoxins
Shewana3_3991	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
Shewana3_3992	SSF81442	Cytochrome c oxidase subunit I-like
Shewana3_3993	SSF110111	Ctag/Cox11
Shewana3_3994	SSF81452	Cytochrome c oxidase subunit III-like
Shewana3_3999	SSF52833	Thioredoxin-like
Shewana3_4000	SSF88713	Glycoside hydrolase/deacetylase
Shewana3_4003	SSF117916	Fe-S cluster assembly (FSCA) domain-like
Shewana3_4003	SSF89360	HesB-like domain
Shewana3_4004	SSF51905	FAD/NAD(P)-binding domain
Shewana3_4004	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Shewana3_4006	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_4006	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_4007	SSF52172	CheY-like
Shewana3_4008	SSF46894	C-terminal effector domain of the bipartite response regulators
Shewana3_4009	SSF53271	PRTase-like
Shewana3_4010	SSF53474	alpha/beta-Hydrolases
Shewana3_4012	SSF53649	Alkaline phosphatase-like
Shewana3_4013	SSF158832	Tex N-terminal region-like
Shewana3_4013	SSF47781	RuvA domain 2-like
Shewana3_4013	SSF50249	Nucleic acid-binding proteins
Shewana3_4013	SSF53098	Ribonuclease H-like
Shewana3_4014	SSF46557	GreA transcript cleavage protein, N-terminal domain
Shewana3_4014	SSF54534	FKBP-like
Shewana3_4015	SSF52172	CheY-like
Shewana3_4015	SSF55073	Nucleotide cyclase
Shewana3_4016	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Shewana3_4016	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_4016	SSF52172	CheY-like
Shewana3_4016	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_4016	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_4017	SSF46894	C-terminal effector domain of the bipartite response regulators
Shewana3_4017	SSF52172	CheY-like
Shewana3_4018	SSF158472	HAMP domain-like
Shewana3_4018	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_4018	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_4019	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shewana3_4020	SSF52833	Thioredoxin-like
Shewana3_4025	SSF46894	C-terminal effector domain of the bipartite response regulators
Shewana3_4025	SSF52172	CheY-like
Shewana3_4026	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_4026	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_4029	SSF141868	EAL domain-like
Shewana3_4029	SSF55073	Nucleotide cyclase
Shewana3_4029	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_4031	SSF49503	Cupredoxins
Shewana3_4031	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
Shewana3_4032	SSF81442	Cytochrome c oxidase subunit I-like
Shewana3_4033	SSF81452	Cytochrome c oxidase subunit III-like
Shewana3_4036	SSF51338	Composite domain of metallo-dependent hydrolases
Shewana3_4036	SSF51556	Metallo-dependent hydrolases
Shewana3_4037	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_4038	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_4039	SSF53955	Lysozyme-like
Shewana3_4041	SSF140478	LemA-like
Shewana3_4045	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shewana3_4045	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shewana3_4045	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shewana3_4046	SSF111369	HlyD-like secretion proteins
Shewana3_4048	SSF48150	DNA-glycosylase
Shewana3_4049	SSF47616	GST C-terminal domain-like
Shewana3_4049	SSF52833	Thioredoxin-like
Shewana3_4050	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shewana3_4051	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shewana3_4052	SSF56935	Porins
Shewana3_4054	SSF51905	FAD/NAD(P)-binding domain
Shewana3_4054	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Shewana3_4056	SSF53633	Carbamate kinase-like
Shewana3_4056	SSF88697	PUA domain-like
Shewana3_4057	SSF53720	ALDH-like
Shewana3_4058	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_4059	SSF47413	lambda repressor-like DNA-binding domains
Shewana3_4060	SSF51645	Malate synthase G
Shewana3_4063	SSF46894	C-terminal effector domain of the bipartite response regulators
Shewana3_4064	SSF56954	Outer membrane efflux proteins (OEP)
Shewana3_4065	SSF111369	HlyD-like secretion proteins
Shewana3_4066	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shewana3_4066	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shewana3_4066	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shewana3_4067	SSF54913	GlnB-like
Shewana3_4069	SSF109604	HD-domain/PDEase-like
Shewana3_4070	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_4071	SSF56322	ADC synthase
Shewana3_4072	SSF53850	Periplasmic binding protein-like II
Shewana3_4074	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shewana3_4075	SSF103190	Sensory domain-like
Shewana3_4075	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shewana3_4075	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shewana3_4076	SSF46689	Homeodomain-like
Shewana3_4076	SSF52172	CheY-like
Shewana3_4076	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_4077	SSF53850	Periplasmic binding protein-like II
Shewana3_4078	SSF161098	MetI-like
Shewana3_4079	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_4080	SSF53448	Nucleotide-diphospho-sugar transferases
Shewana3_4081	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_4081	SSF53218	Molybdenum cofactor biosynthesis proteins
Shewana3_4081	SSF63867	MoeA C-terminal domain-like
Shewana3_4081	SSF63882	MoeA N-terminal region -like
Shewana3_4082	SSF102114	Radical SAM enzymes
Shewana3_4084	SSF46946	S13-like H2TH domain
Shewana3_4084	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Shewana3_4084	SSF81624	N-terminal domain of MutM-like DNA repair proteins
Shewana3_4087	SSF53448	Nucleotide-diphospho-sugar transferases
Shewana3_4088	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Shewana3_4088	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_4088	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
Shewana3_4089	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_4091	SSF52374	Nucleotidylyl transferase
Shewana3_4093	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Shewana3_4094	SSF56784	HAD-like
Shewana3_4095	SSF56112	Protein kinase-like (PK-like)
Shewana3_4096	SSF53448	Nucleotide-diphospho-sugar transferases
Shewana3_4098	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Shewana3_4099	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Shewana3_4100	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Shewana3_4101	SSF56112	Protein kinase-like (PK-like)
Shewana3_4102	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Shewana3_4103	SSF46689	Homeodomain-like
Shewana3_4104	SSF53383	PLP-dependent transferases
Shewana3_4105	SSF50129	GroES-like
Shewana3_4105	SSF51735	NAD(P)-binding Rossmann-fold domains
Shewana3_4106	SSF52821	Rhodanese/Cell cycle control phosphatase
Shewana3_4107	SSF144091	Rhomboid-like
Shewana3_4108	SSF52317	Class I glutamine amidotransferase-like
Shewana3_4109	SSF47807	5' to 3' exonuclease, C-terminal subdomain
Shewana3_4109	SSF53098	Ribonuclease H-like
Shewana3_4109	SSF56672	DNA/RNA polymerases
Shewana3_4109	SSF88723	PIN domain-like
Shewana3_4110	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_4111	SSF46626	Cytochrome c
Shewana3_4113	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shewana3_4116	SSF102114	Radical SAM enzymes
Shewana3_4117	SSF51556	Metallo-dependent hydrolases
Shewana3_4119	SSF53474	alpha/beta-Hydrolases
Shewana3_4120	SSF141868	EAL domain-like
Shewana3_4120	SSF55073	Nucleotide cyclase
Shewana3_4120	SSF55785	PYP-like sensor domain (PAS domain)
Shewana3_4121	SSF54862	4Fe-4S ferredoxins
Shewana3_4123	SSF52096	ClpP/crotonase
Shewana3_4125	SSF53697	SIS domain
Shewana3_4125	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Shewana3_4126	SSF100950	NagB/RpiA/CoA transferase-like
Shewana3_4126	SSF46785	"Winged helix" DNA-binding domain
Shewana3_4127	SSF56935	Porins
Shewana3_4128	SSF51161	Trimeric LpxA-like enzymes
Shewana3_4128	SSF53448	Nucleotide-diphospho-sugar transferases
Shewana3_4129	SSF46604	Epsilon subunit of F1F0-ATP synthase C-terminal domain
Shewana3_4129	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
Shewana3_4130	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
Shewana3_4130	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
Shewana3_4130	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_4131	SSF52943	ATP synthase (F1-ATPase), gamma subunit
Shewana3_4132	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
Shewana3_4132	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
Shewana3_4132	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shewana3_4133	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
Shewana3_4134	SSF81573	F1F0 ATP synthase subunit B, membrane domain
Shewana3_4135	SSF81333	F1F0 ATP synthase subunit C
Shewana3_4136	SSF81336	F1F0 ATP synthase subunit A
Shewana3_4138	SSF110849	ParB/Sulfiredoxin
Shewana3_4139	SSF52540	P-loop containing nucleoside triphosphate hydrolases