Shewmr4_0017	PWY-5136	fatty acid β-oxidation II (peroxisome)
Shewmr4_0017	PWY-6435	4-hydroxybenzoate biosynthesis V
Shewmr4_0017	PWY-6863	pyruvate fermentation to hexanol
Shewmr4_0017	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Shewmr4_0017	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Shewmr4_0017	PWY-6948	sitosterol degradation to androstenedione
Shewmr4_0017	PWY-7094	fatty acid salvage
Shewmr4_0017	PWY-7288	fatty acid β-oxidation (peroxisome, yeast)
Shewmr4_0017	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
Shewmr4_0017	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
Shewmr4_0017	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
Shewmr4_0017	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
Shewmr4_0017	PWY-735	jasmonic acid biosynthesis
Shewmr4_0018	PWY-1361	benzoyl-CoA degradation I (aerobic)
Shewmr4_0018	PWY-5109	2-methylbutanoate biosynthesis
Shewmr4_0018	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Shewmr4_0018	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
Shewmr4_0018	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Shewmr4_0018	PWY-5177	glutaryl-CoA degradation
Shewmr4_0018	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Shewmr4_0018	PWY-6435	4-hydroxybenzoate biosynthesis V
Shewmr4_0018	PWY-6583	pyruvate fermentation to butanol I
Shewmr4_0018	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
Shewmr4_0018	PWY-6863	pyruvate fermentation to hexanol
Shewmr4_0018	PWY-6883	pyruvate fermentation to butanol II
Shewmr4_0018	PWY-6944	androstenedione degradation
Shewmr4_0018	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Shewmr4_0018	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Shewmr4_0018	PWY-7007	methyl ketone biosynthesis
Shewmr4_0018	PWY-7046	4-coumarate degradation (anaerobic)
Shewmr4_0018	PWY-7094	fatty acid salvage
Shewmr4_0018	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Shewmr4_0018	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
Shewmr4_0018	PWY-735	jasmonic acid biosynthesis
Shewmr4_0018	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Shewmr4_0035	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Shewmr4_0035	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Shewmr4_0037	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Shewmr4_0045	PWY-1042	glycolysis IV (plant cytosol)
Shewmr4_0045	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Shewmr4_0045	PWY-5484	glycolysis II (from fructose 6-phosphate)
Shewmr4_0045	PWY-5723	Rubisco shunt
Shewmr4_0045	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Shewmr4_0045	PWY-6886	1-butanol autotrophic biosynthesis
Shewmr4_0045	PWY-6901	superpathway of glucose and xylose degradation
Shewmr4_0045	PWY-7003	glycerol degradation to butanol
Shewmr4_0045	PWY-7124	ethylene biosynthesis V (engineered)
Shewmr4_0045	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Shewmr4_0048	PWY-5667	CDP-diacylglycerol biosynthesis I
Shewmr4_0048	PWY-5981	CDP-diacylglycerol biosynthesis III
Shewmr4_0064	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Shewmr4_0087	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Shewmr4_0097	PWY-5028	L-histidine degradation II
Shewmr4_0097	PWY-5030	L-histidine degradation III
Shewmr4_0099	PWY-5028	L-histidine degradation II
Shewmr4_0099	PWY-5030	L-histidine degradation III
Shewmr4_0100	PWY-5028	L-histidine degradation II
Shewmr4_0100	PWY-5030	L-histidine degradation III
Shewmr4_0126	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
Shewmr4_0126	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Shewmr4_0126	PWY-6148	tetrahydromethanopterin biosynthesis
Shewmr4_0131	PWY-6823	molybdenum cofactor biosynthesis
Shewmr4_0132	PWY-6823	molybdenum cofactor biosynthesis
Shewmr4_0135	PWY-6167	flavin biosynthesis II (archaea)
Shewmr4_0135	PWY-6168	flavin biosynthesis III (fungi)
Shewmr4_0152	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Shewmr4_0152	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Shewmr4_0175	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Shewmr4_0179	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Shewmr4_0179	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Shewmr4_0181	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Shewmr4_0181	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Shewmr4_0182	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Shewmr4_0182	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Shewmr4_0183	PWY-3961	phosphopantothenate biosynthesis II
Shewmr4_0273	PWY-6823	molybdenum cofactor biosynthesis
Shewmr4_0276	PWY-6823	molybdenum cofactor biosynthesis
Shewmr4_0305	PWY-381	nitrate reduction II (assimilatory)
Shewmr4_0305	PWY-5675	nitrate reduction V (assimilatory)
Shewmr4_0305	PWY-6549	L-glutamine biosynthesis III
Shewmr4_0305	PWY-6963	ammonia assimilation cycle I
Shewmr4_0305	PWY-6964	ammonia assimilation cycle II
Shewmr4_0336	PWY-5367	petroselinate biosynthesis
Shewmr4_0336	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Shewmr4_0336	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Shewmr4_0336	PWY-5989	stearate biosynthesis II (bacteria and plants)
Shewmr4_0336	PWY-5994	palmitate biosynthesis I (animals and fungi)
Shewmr4_0336	PWY-6113	superpathway of mycolate biosynthesis
Shewmr4_0336	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Shewmr4_0336	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Shewmr4_0336	PWY-6951	Shewmr4_0336
Shewmr4_0336	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Shewmr4_0336	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Shewmr4_0336	PWYG-321	mycolate biosynthesis
Shewmr4_0346	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Shewmr4_0346	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Shewmr4_0346	PWY-5989	stearate biosynthesis II (bacteria and plants)
Shewmr4_0346	PWY-5994	palmitate biosynthesis I (animals and fungi)
Shewmr4_0346	PWY-6113	superpathway of mycolate biosynthesis
Shewmr4_0346	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Shewmr4_0346	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Shewmr4_0346	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Shewmr4_0346	PWYG-321	mycolate biosynthesis
Shewmr4_0361	PWY-5101	L-isoleucine biosynthesis II
Shewmr4_0361	PWY-5103	L-isoleucine biosynthesis III
Shewmr4_0361	PWY-5104	L-isoleucine biosynthesis IV
Shewmr4_0361	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Shewmr4_0362	PWY-5101	L-isoleucine biosynthesis II
Shewmr4_0362	PWY-5103	L-isoleucine biosynthesis III
Shewmr4_0362	PWY-5104	L-isoleucine biosynthesis IV
Shewmr4_0362	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Shewmr4_0362	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Shewmr4_0362	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Shewmr4_0362	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Shewmr4_0364	PWY-5101	L-isoleucine biosynthesis II
Shewmr4_0364	PWY-5103	L-isoleucine biosynthesis III
Shewmr4_0364	PWY-5104	L-isoleucine biosynthesis IV
Shewmr4_0364	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Shewmr4_0366	PWY-6832	2-aminoethylphosphonate degradation II
Shewmr4_0387	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Shewmr4_0387	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Shewmr4_0388	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Shewmr4_0388	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Shewmr4_0391	PWY-2941	L-lysine biosynthesis II
Shewmr4_0391	PWY-2942	L-lysine biosynthesis III
Shewmr4_0391	PWY-5097	L-lysine biosynthesis VI
Shewmr4_0392	PWY-2941	L-lysine biosynthesis II
Shewmr4_0392	PWY-5097	L-lysine biosynthesis VI
Shewmr4_0404	PWY-3781	aerobic respiration I (cytochrome c)
Shewmr4_0404	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Shewmr4_0404	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Shewmr4_0404	PWY-5690	TCA cycle II (plants and fungi)
Shewmr4_0404	PWY-6728	methylaspartate cycle
Shewmr4_0404	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Shewmr4_0404	PWY-7254	TCA cycle VII (acetate-producers)
Shewmr4_0404	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Shewmr4_0405	PWY-3781	aerobic respiration I (cytochrome c)
Shewmr4_0405	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Shewmr4_0405	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Shewmr4_0405	PWY-5690	TCA cycle II (plants and fungi)
Shewmr4_0405	PWY-6728	methylaspartate cycle
Shewmr4_0405	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Shewmr4_0405	PWY-7254	TCA cycle VII (acetate-producers)
Shewmr4_0405	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Shewmr4_0409	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Shewmr4_0414	PWY-6502	oxidized GTP and dGTP detoxification
Shewmr4_0424	PWY-5316	nicotine biosynthesis
Shewmr4_0424	PWY-5381	pyridine nucleotide cycling (plants)
Shewmr4_0424	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Shewmr4_0424	PWY-7342	superpathway of nicotine biosynthesis
Shewmr4_0428	PWY-6891	thiazole biosynthesis II (Bacillus)
Shewmr4_0428	PWY-6892	thiazole biosynthesis I (E. coli)
Shewmr4_0428	PWY-7560	methylerythritol phosphate pathway II
Shewmr4_0430	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Shewmr4_0430	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Shewmr4_0437	PWY-5747	2-methylcitrate cycle II
Shewmr4_0439	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Shewmr4_0439	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Shewmr4_0444	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Shewmr4_0444	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Shewmr4_0444	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Shewmr4_0445	PWY-6123	inosine-5'-phosphate biosynthesis I
Shewmr4_0445	PWY-6124	inosine-5'-phosphate biosynthesis II
Shewmr4_0445	PWY-7234	inosine-5'-phosphate biosynthesis III
Shewmr4_0476	PWY-723	alkylnitronates degradation
Shewmr4_0488	PWY-5674	nitrate reduction IV (dissimilatory)
Shewmr4_0511	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Shewmr4_0511	PWY-6416	quinate degradation II
Shewmr4_0511	PWY-6707	gallate biosynthesis
Shewmr4_0536	PWY-1042	glycolysis IV (plant cytosol)
Shewmr4_0536	PWY-5484	glycolysis II (from fructose 6-phosphate)
Shewmr4_0536	PWY-6901	superpathway of glucose and xylose degradation
Shewmr4_0536	PWY-7003	glycerol degradation to butanol
Shewmr4_0561	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Shewmr4_0561	PWY-2161	folate polyglutamylation
Shewmr4_0561	PWY-2201	folate transformations I
Shewmr4_0561	PWY-3841	folate transformations II
Shewmr4_0569	PWY-5667	CDP-diacylglycerol biosynthesis I
Shewmr4_0569	PWY-5981	CDP-diacylglycerol biosynthesis III
Shewmr4_0569	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
Shewmr4_0569	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
Shewmr4_0589	PWY-5669	phosphatidylethanolamine biosynthesis I
Shewmr4_0593	PWY-6938	NADH repair
Shewmr4_0597	PWY-2781	<i>cis</i>-zeatin biosynthesis
Shewmr4_0602	PWY-3781	aerobic respiration I (cytochrome c)
Shewmr4_0602	PWY-6692	Fe(II) oxidation
Shewmr4_0602	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
Shewmr4_0602	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Shewmr4_0607	PWY-5958	acridone alkaloid biosynthesis
Shewmr4_0607	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Shewmr4_0607	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Shewmr4_0624	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Shewmr4_0624	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Shewmr4_0624	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Shewmr4_0624	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Shewmr4_0649	PWY-5484	glycolysis II (from fructose 6-phosphate)
Shewmr4_0653	PWY-2941	L-lysine biosynthesis II
Shewmr4_0653	PWY-2942	L-lysine biosynthesis III
Shewmr4_0653	PWY-5097	L-lysine biosynthesis VI
Shewmr4_0653	PWY-6559	spermidine biosynthesis II
Shewmr4_0653	PWY-6562	norspermidine biosynthesis
Shewmr4_0653	PWY-7153	grixazone biosynthesis
Shewmr4_0659	PWY-5674	nitrate reduction IV (dissimilatory)
Shewmr4_0677	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Shewmr4_0677	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Shewmr4_0685	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Shewmr4_0685	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Shewmr4_0688	PWY-5491	diethylphosphate degradation
Shewmr4_0696	PWY-4381	fatty acid biosynthesis initiation I
Shewmr4_0696	PWY-5743	3-hydroxypropanoate cycle
Shewmr4_0696	PWY-5744	glyoxylate assimilation
Shewmr4_0696	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Shewmr4_0696	PWY-6679	jadomycin biosynthesis
Shewmr4_0696	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Shewmr4_0726	PWY-6654	phosphopantothenate biosynthesis III
Shewmr4_0727	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Shewmr4_0727	PWY-6148	tetrahydromethanopterin biosynthesis
Shewmr4_0727	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Shewmr4_0727	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Shewmr4_0732	PWY-5988	wound-induced proteolysis I
Shewmr4_0732	PWY-6018	seed germination protein turnover
Shewmr4_0734	PWY-5723	Rubisco shunt
Shewmr4_0739	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Shewmr4_0769	PWY-7310	D-glucosaminate degradation
Shewmr4_0772	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Shewmr4_0772	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Shewmr4_0773	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Shewmr4_0773	PWY-5723	Rubisco shunt
Shewmr4_0773	PWY-6891	thiazole biosynthesis II (Bacillus)
Shewmr4_0773	PWY-6892	thiazole biosynthesis I (E. coli)
Shewmr4_0773	PWY-6901	superpathway of glucose and xylose degradation
Shewmr4_0773	PWY-7560	methylerythritol phosphate pathway II
Shewmr4_0775	PWY-1042	glycolysis IV (plant cytosol)
Shewmr4_0775	PWY-5484	glycolysis II (from fructose 6-phosphate)
Shewmr4_0775	PWY-6886	1-butanol autotrophic biosynthesis
Shewmr4_0775	PWY-6901	superpathway of glucose and xylose degradation
Shewmr4_0775	PWY-7003	glycerol degradation to butanol
Shewmr4_0776	PWY-1042	glycolysis IV (plant cytosol)
Shewmr4_0776	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Shewmr4_0776	PWY-5484	glycolysis II (from fructose 6-phosphate)
Shewmr4_0776	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Shewmr4_0776	PWY-7385	1,3-propanediol biosynthesis (engineered)
Shewmr4_0802	PWY-5988	wound-induced proteolysis I
Shewmr4_0802	PWY-6018	seed germination protein turnover
Shewmr4_0816	PWY-4261	glycerol degradation I
Shewmr4_0816	PWY-6118	glycerol-3-phosphate shuttle
Shewmr4_0816	PWY-6952	glycerophosphodiester degradation
Shewmr4_0825	PWY-1881	formate oxidation to CO<sub>2</sub>
Shewmr4_0825	PWY-5497	purine nucleobases degradation II (anaerobic)
Shewmr4_0825	PWY-6696	oxalate degradation III
Shewmr4_0838	PWY-2201	folate transformations I
Shewmr4_0838	PWY-3841	folate transformations II
Shewmr4_0842	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Shewmr4_0842	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Shewmr4_0842	PWY-6269	adenosylcobalamin salvage from cobinamide II
Shewmr4_0843	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Shewmr4_0843	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Shewmr4_0843	PWY-6269	adenosylcobalamin salvage from cobinamide II
Shewmr4_0844	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Shewmr4_0844	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Shewmr4_0844	PWY-6269	adenosylcobalamin salvage from cobinamide II
Shewmr4_0846	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Shewmr4_0846	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Shewmr4_0846	PWY-6268	adenosylcobalamin salvage from cobalamin
Shewmr4_0846	PWY-6269	adenosylcobalamin salvage from cobinamide II
Shewmr4_0860	PWY-5686	UMP biosynthesis
Shewmr4_0900	PWY-3841	folate transformations II
Shewmr4_0900	PWY-6614	tetrahydrofolate biosynthesis
Shewmr4_0928	PWY-5344	L-homocysteine biosynthesis
Shewmr4_0928	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Shewmr4_0934	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Shewmr4_0934	PWY-6153	autoinducer AI-2 biosynthesis I
Shewmr4_0934	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
Shewmr4_0949	PWY-5988	wound-induced proteolysis I
Shewmr4_0949	PWY-6018	seed germination protein turnover
Shewmr4_0964	PWY-2941	L-lysine biosynthesis II
Shewmr4_0964	PWY-2942	L-lysine biosynthesis III
Shewmr4_0964	PWY-5097	L-lysine biosynthesis VI
Shewmr4_0965	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Shewmr4_0965	PWY-5686	UMP biosynthesis
Shewmr4_0965	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Shewmr4_0966	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Shewmr4_0966	PWY-5686	UMP biosynthesis
Shewmr4_0966	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Shewmr4_0974	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Shewmr4_0974	PWY-5723	Rubisco shunt
Shewmr4_0984	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Shewmr4_0984	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Shewmr4_0984	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Shewmr4_0985	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Shewmr4_0985	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Shewmr4_0987	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Shewmr4_0987	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Shewmr4_0994	PWY-5381	pyridine nucleotide cycling (plants)
Shewmr4_0994	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Shewmr4_1020	PWY-6614	tetrahydrofolate biosynthesis
Shewmr4_1021	PWY-6749	CMP-legionaminate biosynthesis I
Shewmr4_1022	PWY-1042	glycolysis IV (plant cytosol)
Shewmr4_1022	PWY-5484	glycolysis II (from fructose 6-phosphate)
Shewmr4_1022	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Shewmr4_1022	PWY-7003	glycerol degradation to butanol
Shewmr4_1037	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Shewmr4_1038	PWY-7181	pyrimidine deoxyribonucleosides degradation
Shewmr4_1039	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Shewmr4_1040	PWY-4202	arsenate detoxification I (glutaredoxin)
Shewmr4_1040	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Shewmr4_1040	PWY-6608	guanosine nucleotides degradation III
Shewmr4_1040	PWY-6609	adenine and adenosine salvage III
Shewmr4_1040	PWY-6611	adenine and adenosine salvage V
Shewmr4_1040	PWY-6620	guanine and guanosine salvage
Shewmr4_1040	PWY-6627	salinosporamide A biosynthesis
Shewmr4_1040	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Shewmr4_1040	PWY-7179	purine deoxyribonucleosides degradation I
Shewmr4_1040	PWY-7179-1	purine deoxyribonucleosides degradation
Shewmr4_1068	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Shewmr4_1094	PWY-1622	formaldehyde assimilation I (serine pathway)
Shewmr4_1094	PWY-181	photorespiration
Shewmr4_1094	PWY-2161	folate polyglutamylation
Shewmr4_1094	PWY-2201	folate transformations I
Shewmr4_1094	PWY-3661	glycine betaine degradation I
Shewmr4_1094	PWY-3661-1	glycine betaine degradation II (mammalian)
Shewmr4_1094	PWY-3841	folate transformations II
Shewmr4_1094	PWY-5497	purine nucleobases degradation II (anaerobic)
Shewmr4_1097	PWY-6167	flavin biosynthesis II (archaea)
Shewmr4_1097	PWY-6168	flavin biosynthesis III (fungi)
Shewmr4_1097	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Shewmr4_1098	PWY-6167	flavin biosynthesis II (archaea)
Shewmr4_1098	PWY-6168	flavin biosynthesis III (fungi)
Shewmr4_1098	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Shewmr4_1099	PWY-6167	flavin biosynthesis II (archaea)
Shewmr4_1099	PWY-6168	flavin biosynthesis III (fungi)
Shewmr4_1101	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Shewmr4_1101	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Shewmr4_1101	PWY-6896	thiamin salvage I
Shewmr4_1101	PWY-6897	thiamin salvage II
Shewmr4_1102	PWY-5269	cardiolipin biosynthesis II
Shewmr4_1102	PWY-5668	cardiolipin biosynthesis I
Shewmr4_1114	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Shewmr4_1114	PWY-7177	UTP and CTP dephosphorylation II
Shewmr4_1114	PWY-7185	UTP and CTP dephosphorylation I
Shewmr4_1115	PWY-1042	glycolysis IV (plant cytosol)
Shewmr4_1115	PWY-1622	formaldehyde assimilation I (serine pathway)
Shewmr4_1115	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Shewmr4_1115	PWY-5484	glycolysis II (from fructose 6-phosphate)
Shewmr4_1115	PWY-5723	Rubisco shunt
Shewmr4_1115	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Shewmr4_1115	PWY-6886	1-butanol autotrophic biosynthesis
Shewmr4_1115	PWY-6901	superpathway of glucose and xylose degradation
Shewmr4_1115	PWY-7003	glycerol degradation to butanol
Shewmr4_1115	PWY-7124	ethylene biosynthesis V (engineered)
Shewmr4_1115	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Shewmr4_1117	PWY-7560	methylerythritol phosphate pathway II
Shewmr4_1118	PWY-7560	methylerythritol phosphate pathway II
Shewmr4_1120	PWY-5381	pyridine nucleotide cycling (plants)
Shewmr4_1120	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Shewmr4_1120	PWY-6596	adenosine nucleotides degradation I
Shewmr4_1120	PWY-6606	guanosine nucleotides degradation II
Shewmr4_1120	PWY-6607	guanosine nucleotides degradation I
Shewmr4_1120	PWY-6608	guanosine nucleotides degradation III
Shewmr4_1120	PWY-7185	UTP and CTP dephosphorylation I
Shewmr4_1128	PWY-2941	L-lysine biosynthesis II
Shewmr4_1128	PWY-2942	L-lysine biosynthesis III
Shewmr4_1128	PWY-5097	L-lysine biosynthesis VI
Shewmr4_1128	PWY-6559	spermidine biosynthesis II
Shewmr4_1128	PWY-6562	norspermidine biosynthesis
Shewmr4_1128	PWY-7153	grixazone biosynthesis
Shewmr4_1138	PWY-2941	L-lysine biosynthesis II
Shewmr4_1138	PWY-2942	L-lysine biosynthesis III
Shewmr4_1138	PWY-5097	L-lysine biosynthesis VI
Shewmr4_1138	PWY-6559	spermidine biosynthesis II
Shewmr4_1138	PWY-6562	norspermidine biosynthesis
Shewmr4_1138	PWY-7153	grixazone biosynthesis
Shewmr4_1139	PWY-702	L-methionine biosynthesis II
Shewmr4_1188	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Shewmr4_1192	PWY-3341	L-proline biosynthesis III
Shewmr4_1192	PWY-4981	L-proline biosynthesis II (from arginine)
Shewmr4_1192	PWY-6344	L-ornithine degradation II (Stickland reaction)
Shewmr4_1193	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Shewmr4_1228	PWY-7560	methylerythritol phosphate pathway II
Shewmr4_1234	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Shewmr4_1234	PWY-6596	adenosine nucleotides degradation I
Shewmr4_1234	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Shewmr4_1235	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Shewmr4_1238	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Shewmr4_1238	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Shewmr4_1238	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Shewmr4_1241	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
Shewmr4_1285	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Shewmr4_1318	PWY-3221	dTDP-L-rhamnose biosynthesis II
Shewmr4_1318	PWY-6808	dTDP-D-forosamine biosynthesis
Shewmr4_1318	PWY-6942	dTDP-D-desosamine biosynthesis
Shewmr4_1318	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Shewmr4_1318	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Shewmr4_1318	PWY-6974	dTDP-L-olivose biosynthesis
Shewmr4_1318	PWY-6976	dTDP-L-mycarose biosynthesis
Shewmr4_1318	PWY-7104	dTDP-L-megosamine biosynthesis
Shewmr4_1318	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Shewmr4_1318	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Shewmr4_1318	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Shewmr4_1318	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Shewmr4_1318	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Shewmr4_1318	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Shewmr4_1318	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Shewmr4_1318	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Shewmr4_1319	PWY-3221	dTDP-L-rhamnose biosynthesis II
Shewmr4_1319	PWY-6808	dTDP-D-forosamine biosynthesis
Shewmr4_1319	PWY-6942	dTDP-D-desosamine biosynthesis
Shewmr4_1319	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Shewmr4_1319	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Shewmr4_1319	PWY-6974	dTDP-L-olivose biosynthesis
Shewmr4_1319	PWY-6976	dTDP-L-mycarose biosynthesis
Shewmr4_1319	PWY-7104	dTDP-L-megosamine biosynthesis
Shewmr4_1319	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Shewmr4_1319	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Shewmr4_1319	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Shewmr4_1319	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Shewmr4_1319	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Shewmr4_1319	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Shewmr4_1319	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Shewmr4_1319	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Shewmr4_1328	PWY-5659	GDP-mannose biosynthesis
Shewmr4_1328	PWY-6073	alginate biosynthesis I (algal)
Shewmr4_1328	PWY-6082	alginate biosynthesis II (bacterial)
Shewmr4_1328	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Shewmr4_1329	PWY-6749	CMP-legionaminate biosynthesis I
Shewmr4_1330	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Shewmr4_1331	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Shewmr4_1331	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Shewmr4_1331	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Shewmr4_1331	PWY-7290	<i>Escherichia coli</i> serotype O86 <i>O</i>-antigen biosynthesis
Shewmr4_1331	PWY-7530	&beta;-D-galactosaminyl-(1&rarr;3)-<i>N</i>-acetyl-&alpha;-D-galactosamine biosynthesis
Shewmr4_1332	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Shewmr4_1332	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Shewmr4_1332	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Shewmr4_1332	PWY-7290	<i>Escherichia coli</i> serotype O86 <i>O</i>-antigen biosynthesis
Shewmr4_1332	PWY-7530	&beta;-D-galactosaminyl-(1&rarr;3)-<i>N</i>-acetyl-&alpha;-D-galactosamine biosynthesis
Shewmr4_1333	PWY-6749	CMP-legionaminate biosynthesis I
Shewmr4_1338	PWY-3221	dTDP-L-rhamnose biosynthesis II
Shewmr4_1338	PWY-6808	dTDP-D-forosamine biosynthesis
Shewmr4_1338	PWY-6942	dTDP-D-desosamine biosynthesis
Shewmr4_1338	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Shewmr4_1338	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Shewmr4_1338	PWY-6974	dTDP-L-olivose biosynthesis
Shewmr4_1338	PWY-6976	dTDP-L-mycarose biosynthesis
Shewmr4_1338	PWY-7104	dTDP-L-megosamine biosynthesis
Shewmr4_1338	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Shewmr4_1338	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Shewmr4_1338	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Shewmr4_1338	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Shewmr4_1338	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Shewmr4_1338	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Shewmr4_1338	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Shewmr4_1338	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Shewmr4_1357	PWY-7199	pyrimidine deoxyribonucleosides salvage
Shewmr4_1365	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Shewmr4_1379	PWY-6012	acyl carrier protein metabolism I
Shewmr4_1381	PWY-6700	queuosine biosynthesis
Shewmr4_1382	PWY-6700	queuosine biosynthesis
Shewmr4_1388	PWY-5194	siroheme biosynthesis
Shewmr4_1388	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Shewmr4_1407	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Shewmr4_1407	PWY-6435	4-hydroxybenzoate biosynthesis V
Shewmr4_1407	PWY-6863	pyruvate fermentation to hexanol
Shewmr4_1407	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Shewmr4_1407	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Shewmr4_1407	PWY-6948	sitosterol degradation to androstenedione
Shewmr4_1407	PWY-7094	fatty acid salvage
Shewmr4_1407	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
Shewmr4_1407	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
Shewmr4_1407	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
Shewmr4_1407	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
Shewmr4_1407	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
Shewmr4_1407	PWY-735	jasmonic acid biosynthesis
Shewmr4_1408	PWY-1361	benzoyl-CoA degradation I (aerobic)
Shewmr4_1408	PWY-5109	2-methylbutanoate biosynthesis
Shewmr4_1408	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Shewmr4_1408	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Shewmr4_1408	PWY-5177	glutaryl-CoA degradation
Shewmr4_1408	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Shewmr4_1408	PWY-6435	4-hydroxybenzoate biosynthesis V
Shewmr4_1408	PWY-6583	pyruvate fermentation to butanol I
Shewmr4_1408	PWY-6863	pyruvate fermentation to hexanol
Shewmr4_1408	PWY-6883	pyruvate fermentation to butanol II
Shewmr4_1408	PWY-6944	androstenedione degradation
Shewmr4_1408	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Shewmr4_1408	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Shewmr4_1408	PWY-7007	methyl ketone biosynthesis
Shewmr4_1408	PWY-7046	4-coumarate degradation (anaerobic)
Shewmr4_1408	PWY-7094	fatty acid salvage
Shewmr4_1408	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Shewmr4_1408	PWY-735	jasmonic acid biosynthesis
Shewmr4_1408	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Shewmr4_1416	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Shewmr4_1418	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Shewmr4_1418	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Shewmr4_1418	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Shewmr4_1424	PWY-2941	L-lysine biosynthesis II
Shewmr4_1424	PWY-2942	L-lysine biosynthesis III
Shewmr4_1424	PWY-5097	L-lysine biosynthesis VI
Shewmr4_1424	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Shewmr4_1424	PWY-6559	spermidine biosynthesis II
Shewmr4_1424	PWY-6562	norspermidine biosynthesis
Shewmr4_1424	PWY-7153	grixazone biosynthesis
Shewmr4_1424	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Shewmr4_1427	PWY-2161	folate polyglutamylation
Shewmr4_1430	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Shewmr4_1430	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Shewmr4_1430	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Shewmr4_1430	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Shewmr4_1461	PWY-5958	acridone alkaloid biosynthesis
Shewmr4_1461	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Shewmr4_1461	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Shewmr4_1462	PWY-5958	acridone alkaloid biosynthesis
Shewmr4_1462	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Shewmr4_1462	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Shewmr4_1484	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Shewmr4_1484	PWY-6148	tetrahydromethanopterin biosynthesis
Shewmr4_1484	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Shewmr4_1484	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Shewmr4_1490	PWY-1281	sulfoacetaldehyde degradation I
Shewmr4_1490	PWY-5482	pyruvate fermentation to acetate II
Shewmr4_1490	PWY-5485	pyruvate fermentation to acetate IV
Shewmr4_1490	PWY-5497	purine nucleobases degradation II (anaerobic)
Shewmr4_1490	PWY-6637	sulfolactate degradation II
Shewmr4_1491	PWY-5482	pyruvate fermentation to acetate II
Shewmr4_1491	PWY-5485	pyruvate fermentation to acetate IV
Shewmr4_1491	PWY-5497	purine nucleobases degradation II (anaerobic)
Shewmr4_1494	PWY-5480	pyruvate fermentation to ethanol I
Shewmr4_1494	PWY-5485	pyruvate fermentation to acetate IV
Shewmr4_1494	PWY-5493	reductive monocarboxylic acid cycle
Shewmr4_1500	PWY-6936	seleno-amino acid biosynthesis
Shewmr4_1502	PWY-4381	fatty acid biosynthesis initiation I
Shewmr4_1504	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Shewmr4_1520	PWY-4381	fatty acid biosynthesis initiation I
Shewmr4_1545	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Shewmr4_1545	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Shewmr4_1545	PWY-5989	stearate biosynthesis II (bacteria and plants)
Shewmr4_1545	PWY-5994	palmitate biosynthesis I (animals and fungi)
Shewmr4_1545	PWY-6113	superpathway of mycolate biosynthesis
Shewmr4_1545	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Shewmr4_1545	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Shewmr4_1545	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Shewmr4_1545	PWYG-321	mycolate biosynthesis
Shewmr4_1549	PWY-5269	cardiolipin biosynthesis II
Shewmr4_1549	PWY-5668	cardiolipin biosynthesis I
Shewmr4_1557	PWY-40	putrescine biosynthesis I
Shewmr4_1557	PWY-43	putrescine biosynthesis II
Shewmr4_1557	PWY-6305	putrescine biosynthesis IV
Shewmr4_1557	PWY-6834	spermidine biosynthesis III
Shewmr4_1558	PWY-6834	spermidine biosynthesis III
Shewmr4_1559	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Shewmr4_1559	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Shewmr4_1572	PWY-6854	ethylene biosynthesis III (microbes)
Shewmr4_1590	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Shewmr4_1590	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Shewmr4_1590	PWY-6164	3-dehydroquinate biosynthesis I
Shewmr4_1592	PWY-5484	glycolysis II (from fructose 6-phosphate)
Shewmr4_1593	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Shewmr4_1593	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Shewmr4_1601	PWY-6123	inosine-5'-phosphate biosynthesis I
Shewmr4_1601	PWY-6124	inosine-5'-phosphate biosynthesis II
Shewmr4_1601	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Shewmr4_1601	PWY-7234	inosine-5'-phosphate biosynthesis III
Shewmr4_1606	PWY-5913	TCA cycle VI (obligate autotrophs)
Shewmr4_1606	PWY-6549	L-glutamine biosynthesis III
Shewmr4_1606	PWY-6728	methylaspartate cycle
Shewmr4_1606	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Shewmr4_1606	PWY-7124	ethylene biosynthesis V (engineered)
Shewmr4_1606	PWY-7254	TCA cycle VII (acetate-producers)
Shewmr4_1606	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Shewmr4_1617	PWY-5839	menaquinol-7 biosynthesis
Shewmr4_1617	PWY-5851	demethylmenaquinol-9 biosynthesis
Shewmr4_1617	PWY-5852	demethylmenaquinol-8 biosynthesis I
Shewmr4_1617	PWY-5853	demethylmenaquinol-6 biosynthesis I
Shewmr4_1617	PWY-5890	menaquinol-10 biosynthesis
Shewmr4_1617	PWY-5891	menaquinol-11 biosynthesis
Shewmr4_1617	PWY-5892	menaquinol-12 biosynthesis
Shewmr4_1617	PWY-5895	menaquinol-13 biosynthesis
Shewmr4_1633	PWY-3781	aerobic respiration I (cytochrome c)
Shewmr4_1633	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Shewmr4_1633	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Shewmr4_1633	PWY-5690	TCA cycle II (plants and fungi)
Shewmr4_1633	PWY-6728	methylaspartate cycle
Shewmr4_1633	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Shewmr4_1633	PWY-7254	TCA cycle VII (acetate-producers)
Shewmr4_1633	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Shewmr4_1634	PWY-3781	aerobic respiration I (cytochrome c)
Shewmr4_1634	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Shewmr4_1634	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Shewmr4_1634	PWY-5690	TCA cycle II (plants and fungi)
Shewmr4_1634	PWY-6728	methylaspartate cycle
Shewmr4_1634	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Shewmr4_1634	PWY-7254	TCA cycle VII (acetate-producers)
Shewmr4_1634	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Shewmr4_1635	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Shewmr4_1636	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Shewmr4_1637	PWY-5392	reductive TCA cycle II
Shewmr4_1637	PWY-5537	pyruvate fermentation to acetate V
Shewmr4_1637	PWY-5538	pyruvate fermentation to acetate VI
Shewmr4_1637	PWY-5690	TCA cycle II (plants and fungi)
Shewmr4_1637	PWY-5913	TCA cycle VI (obligate autotrophs)
Shewmr4_1637	PWY-6728	methylaspartate cycle
Shewmr4_1637	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Shewmr4_1637	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Shewmr4_1638	PWY-5392	reductive TCA cycle II
Shewmr4_1638	PWY-5537	pyruvate fermentation to acetate V
Shewmr4_1638	PWY-5538	pyruvate fermentation to acetate VI
Shewmr4_1638	PWY-5690	TCA cycle II (plants and fungi)
Shewmr4_1638	PWY-5913	TCA cycle VI (obligate autotrophs)
Shewmr4_1638	PWY-6728	methylaspartate cycle
Shewmr4_1638	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Shewmr4_1638	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Shewmr4_1653	PWY-5663	tetrahydrobiopterin biosynthesis I
Shewmr4_1653	PWY-5664	tetrahydrobiopterin biosynthesis II
Shewmr4_1653	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Shewmr4_1653	PWY-6703	preQ<sub>0</sub> biosynthesis
Shewmr4_1653	PWY-6983	tetrahydrobiopterin biosynthesis III
Shewmr4_1653	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Shewmr4_1657	PWY-7193	pyrimidine ribonucleosides salvage I
Shewmr4_1658	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewmr4_1659	PWY-6543	4-aminobenzoate biosynthesis
Shewmr4_1659	PWY-6722	candicidin biosynthesis
Shewmr4_1661	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Shewmr4_1661	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Shewmr4_1661	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewmr4_1661	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Shewmr4_1661	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Shewmr4_1661	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Shewmr4_1680	PWY-5022	4-aminobutanoate degradation V
Shewmr4_1680	PWY-6728	methylaspartate cycle
Shewmr4_1680	PWY-7126	ethylene biosynthesis IV
Shewmr4_1681	PWY-5686	UMP biosynthesis
Shewmr4_1683	PWY-3162	L-tryptophan degradation V (side chain pathway)
Shewmr4_1683	PWY-5057	L-valine degradation II
Shewmr4_1683	PWY-5076	L-leucine degradation III
Shewmr4_1683	PWY-5078	L-isoleucine degradation II
Shewmr4_1683	PWY-5079	L-phenylalanine degradation III
Shewmr4_1683	PWY-5082	L-methionine degradation III
Shewmr4_1683	PWY-5162	2-oxopentenoate degradation
Shewmr4_1683	PWY-5436	L-threonine degradation IV
Shewmr4_1683	PWY-5480	pyruvate fermentation to ethanol I
Shewmr4_1683	PWY-5486	pyruvate fermentation to ethanol II
Shewmr4_1683	PWY-5751	phenylethanol biosynthesis
Shewmr4_1683	PWY-6028	acetoin degradation
Shewmr4_1683	PWY-6313	serotonin degradation
Shewmr4_1683	PWY-6333	acetaldehyde biosynthesis I
Shewmr4_1683	PWY-6342	noradrenaline and adrenaline degradation
Shewmr4_1683	PWY-6587	pyruvate fermentation to ethanol III
Shewmr4_1683	PWY-6802	salidroside biosynthesis
Shewmr4_1683	PWY-6871	3-methylbutanol biosynthesis
Shewmr4_1683	PWY-7013	L-1,2-propanediol degradation
Shewmr4_1683	PWY-7085	triethylamine degradation
Shewmr4_1683	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Shewmr4_1683	PWY-7118	chitin degradation to ethanol
Shewmr4_1683	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Shewmr4_1683	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Shewmr4_1683	PWY-7557	dehydrodiconiferyl alcohol degradation
Shewmr4_1726	PWY-6902	chitin degradation II
Shewmr4_1735	PWY-2301	<i>myo</i>-inositol biosynthesis
Shewmr4_1735	PWY-4702	phytate degradation I
Shewmr4_1735	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Shewmr4_1737	PWY-6936	seleno-amino acid biosynthesis
Shewmr4_1737	PWY-7274	D-cycloserine biosynthesis
Shewmr4_1739	PWY-6823	molybdenum cofactor biosynthesis
Shewmr4_1739	PWY-6891	thiazole biosynthesis II (Bacillus)
Shewmr4_1739	PWY-6892	thiazole biosynthesis I (E. coli)
Shewmr4_1739	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Shewmr4_1747	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Shewmr4_1747	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Shewmr4_1747	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Shewmr4_1747	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewmr4_1747	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Shewmr4_1747	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Shewmr4_1747	PWY-7205	CMP phosphorylation
Shewmr4_1747	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Shewmr4_1747	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewmr4_1747	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Shewmr4_1747	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewmr4_1747	PWY-7224	purine deoxyribonucleosides salvage
Shewmr4_1747	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Shewmr4_1747	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Shewmr4_1749	PWY-5101	L-isoleucine biosynthesis II
Shewmr4_1749	PWY-5103	L-isoleucine biosynthesis III
Shewmr4_1749	PWY-5104	L-isoleucine biosynthesis IV
Shewmr4_1749	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Shewmr4_1749	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Shewmr4_1749	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Shewmr4_1749	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Shewmr4_1750	PWY-5101	L-isoleucine biosynthesis II
Shewmr4_1750	PWY-5103	L-isoleucine biosynthesis III
Shewmr4_1750	PWY-5104	L-isoleucine biosynthesis IV
Shewmr4_1750	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Shewmr4_1750	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Shewmr4_1750	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Shewmr4_1750	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Shewmr4_1786	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Shewmr4_1786	PWY-3162	L-tryptophan degradation V (side chain pathway)
Shewmr4_1786	PWY-5057	L-valine degradation II
Shewmr4_1786	PWY-5076	L-leucine degradation III
Shewmr4_1786	PWY-5078	L-isoleucine degradation II
Shewmr4_1786	PWY-5079	L-phenylalanine degradation III
Shewmr4_1786	PWY-5082	L-methionine degradation III
Shewmr4_1786	PWY-5480	pyruvate fermentation to ethanol I
Shewmr4_1786	PWY-5486	pyruvate fermentation to ethanol II
Shewmr4_1786	PWY-5751	phenylethanol biosynthesis
Shewmr4_1786	PWY-6028	acetoin degradation
Shewmr4_1786	PWY-6313	serotonin degradation
Shewmr4_1786	PWY-6333	acetaldehyde biosynthesis I
Shewmr4_1786	PWY-6342	noradrenaline and adrenaline degradation
Shewmr4_1786	PWY-6587	pyruvate fermentation to ethanol III
Shewmr4_1786	PWY-6802	salidroside biosynthesis
Shewmr4_1786	PWY-6871	3-methylbutanol biosynthesis
Shewmr4_1786	PWY-7013	L-1,2-propanediol degradation
Shewmr4_1786	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Shewmr4_1786	PWY-7118	chitin degradation to ethanol
Shewmr4_1786	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Shewmr4_1786	PWY-7557	dehydrodiconiferyl alcohol degradation
Shewmr4_1787	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Shewmr4_1851	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Shewmr4_1851	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Shewmr4_1854	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Shewmr4_1854	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Shewmr4_1854	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Shewmr4_1854	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Shewmr4_1869	PWY-5767	Shewmr4_1869
Shewmr4_1881	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Shewmr4_1882	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Shewmr4_1882	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Shewmr4_1882	PWY-6897	thiamin salvage II
Shewmr4_1882	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Shewmr4_1882	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Shewmr4_1882	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Shewmr4_1882	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Shewmr4_1885	PWY-6891	thiazole biosynthesis II (Bacillus)
Shewmr4_1885	PWY-6892	thiazole biosynthesis I (E. coli)
Shewmr4_1886	PWY-6892	thiazole biosynthesis I (E. coli)
Shewmr4_1886	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Shewmr4_1915	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Shewmr4_1915	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Shewmr4_1915	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Shewmr4_1915	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Shewmr4_1915	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewmr4_1915	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewmr4_1915	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Shewmr4_1915	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Shewmr4_1916	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Shewmr4_1916	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Shewmr4_1916	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Shewmr4_1916	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Shewmr4_1916	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewmr4_1916	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewmr4_1916	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Shewmr4_1916	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Shewmr4_1918	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
Shewmr4_1918	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
Shewmr4_1918	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
Shewmr4_1918	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Shewmr4_1918	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
Shewmr4_1918	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
Shewmr4_1918	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
Shewmr4_1918	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
Shewmr4_1918	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Shewmr4_1918	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
Shewmr4_1921	PWY-5913	TCA cycle VI (obligate autotrophs)
Shewmr4_1921	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Shewmr4_1921	PWY-6638	sulfolactate degradation III
Shewmr4_1921	PWY-6642	(<i>R</i>)-cysteate degradation
Shewmr4_1921	PWY-6643	coenzyme M biosynthesis II
Shewmr4_1921	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Shewmr4_1921	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Shewmr4_1921	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Shewmr4_1922	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Shewmr4_1923	PWY-7205	CMP phosphorylation
Shewmr4_1928	PWY-5686	UMP biosynthesis
Shewmr4_1932	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Shewmr4_1932	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Shewmr4_1935	PWY-5269	cardiolipin biosynthesis II
Shewmr4_1935	PWY-5668	cardiolipin biosynthesis I
Shewmr4_1952	PWY-6167	flavin biosynthesis II (archaea)
Shewmr4_1952	PWY-6168	flavin biosynthesis III (fungi)
Shewmr4_1952	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Shewmr4_1967	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Shewmr4_1977	PWY-4261	glycerol degradation I
Shewmr4_1983	PWY-5101	L-isoleucine biosynthesis II
Shewmr4_1983	PWY-5103	L-isoleucine biosynthesis III
Shewmr4_1983	PWY-5104	L-isoleucine biosynthesis IV
Shewmr4_1983	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Shewmr4_1985	PWY-2723	trehalose degradation V
Shewmr4_1985	PWY-6317	galactose degradation I (Leloir pathway)
Shewmr4_1985	PWY-6737	starch degradation V
Shewmr4_2006	PWY-3781	aerobic respiration I (cytochrome c)
Shewmr4_2006	PWY-4521	arsenite oxidation I (respiratory)
Shewmr4_2006	PWY-6692	Fe(II) oxidation
Shewmr4_2006	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Shewmr4_2007	PWY-3781	aerobic respiration I (cytochrome c)
Shewmr4_2007	PWY-4521	arsenite oxidation I (respiratory)
Shewmr4_2007	PWY-6692	Fe(II) oxidation
Shewmr4_2007	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Shewmr4_2020	PWY-5913	TCA cycle VI (obligate autotrophs)
Shewmr4_2020	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Shewmr4_2020	PWY-6638	sulfolactate degradation III
Shewmr4_2020	PWY-6642	(<i>R</i>)-cysteate degradation
Shewmr4_2020	PWY-6643	coenzyme M biosynthesis II
Shewmr4_2020	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Shewmr4_2020	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Shewmr4_2020	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Shewmr4_2021	PWY-1042	glycolysis IV (plant cytosol)
Shewmr4_2021	PWY-5484	glycolysis II (from fructose 6-phosphate)
Shewmr4_2021	PWY-6901	superpathway of glucose and xylose degradation
Shewmr4_2021	PWY-7003	glycerol degradation to butanol
Shewmr4_2023	PWY-1042	glycolysis IV (plant cytosol)
Shewmr4_2023	PWY-5484	glycolysis II (from fructose 6-phosphate)
Shewmr4_2023	PWY-6901	superpathway of glucose and xylose degradation
Shewmr4_2023	PWY-7003	glycerol degradation to butanol
Shewmr4_2024	PWY-6854	ethylene biosynthesis III (microbes)
Shewmr4_2025	PWY-5316	nicotine biosynthesis
Shewmr4_2025	PWY-7342	superpathway of nicotine biosynthesis
Shewmr4_2026	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Shewmr4_2031	PWY-2723	trehalose degradation V
Shewmr4_2031	PWY-3801	sucrose degradation II (sucrose synthase)
Shewmr4_2031	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Shewmr4_2031	PWY-5661	GDP-glucose biosynthesis
Shewmr4_2031	PWY-5661-1	Shewmr4_2031
Shewmr4_2031	PWY-5940	streptomycin biosynthesis
Shewmr4_2031	PWY-5941	glycogen degradation II (eukaryotic)
Shewmr4_2031	PWY-622	starch biosynthesis
Shewmr4_2031	PWY-6731	starch degradation III
Shewmr4_2031	PWY-6737	starch degradation V
Shewmr4_2031	PWY-6749	CMP-legionaminate biosynthesis I
Shewmr4_2031	PWY-7238	sucrose biosynthesis II
Shewmr4_2031	PWY-7343	UDP-glucose biosynthesis
Shewmr4_2043	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Shewmr4_2043	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Shewmr4_2043	PWY-7242	D-fructuronate degradation
Shewmr4_2043	PWY-7310	D-glucosaminate degradation
Shewmr4_2044	PWY-5101	L-isoleucine biosynthesis II
Shewmr4_2044	PWY-5103	L-isoleucine biosynthesis III
Shewmr4_2044	PWY-5104	L-isoleucine biosynthesis IV
Shewmr4_2044	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Shewmr4_2045	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Shewmr4_2045	PWY-6855	chitin degradation I (archaea)
Shewmr4_2045	PWY-6906	chitin derivatives degradation
Shewmr4_2046	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Shewmr4_2048	PWY-1042	glycolysis IV (plant cytosol)
Shewmr4_2048	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Shewmr4_2048	PWY-5484	glycolysis II (from fructose 6-phosphate)
Shewmr4_2048	PWY-5723	Rubisco shunt
Shewmr4_2048	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Shewmr4_2048	PWY-6886	1-butanol autotrophic biosynthesis
Shewmr4_2048	PWY-6901	superpathway of glucose and xylose degradation
Shewmr4_2048	PWY-7003	glycerol degradation to butanol
Shewmr4_2048	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Shewmr4_2048	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Shewmr4_2058	PWY-6703	preQ<sub>0</sub> biosynthesis
Shewmr4_2059	PWY-6703	preQ<sub>0</sub> biosynthesis
Shewmr4_2083	PWY-4702	phytate degradation I
Shewmr4_2098	PWY-5392	reductive TCA cycle II
Shewmr4_2098	PWY-5537	pyruvate fermentation to acetate V
Shewmr4_2098	PWY-5538	pyruvate fermentation to acetate VI
Shewmr4_2098	PWY-5690	TCA cycle II (plants and fungi)
Shewmr4_2098	PWY-5913	TCA cycle VI (obligate autotrophs)
Shewmr4_2098	PWY-6728	methylaspartate cycle
Shewmr4_2098	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Shewmr4_2098	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Shewmr4_2107	PWY-5386	methylglyoxal degradation I
Shewmr4_2124	PWY-5392	reductive TCA cycle II
Shewmr4_2124	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Shewmr4_2124	PWY-5690	TCA cycle II (plants and fungi)
Shewmr4_2124	PWY-5913	TCA cycle VI (obligate autotrophs)
Shewmr4_2124	PWY-6728	methylaspartate cycle
Shewmr4_2124	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Shewmr4_2124	PWY-7254	TCA cycle VII (acetate-producers)
Shewmr4_2124	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Shewmr4_2125	PWY-5958	acridone alkaloid biosynthesis
Shewmr4_2125	PWY-6543	4-aminobenzoate biosynthesis
Shewmr4_2125	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Shewmr4_2125	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Shewmr4_2125	PWY-6722	candicidin biosynthesis
Shewmr4_2129	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Shewmr4_2129	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Shewmr4_2161	PWY-5386	methylglyoxal degradation I
Shewmr4_2183	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Shewmr4_2183	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Shewmr4_2192	PWY-7039	phosphatidate metabolism, as a signaling molecule
Shewmr4_2203	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Shewmr4_2204	PWY-6936	seleno-amino acid biosynthesis
Shewmr4_2249	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Shewmr4_2255	PWY-6605	adenine and adenosine salvage II
Shewmr4_2255	PWY-6610	adenine and adenosine salvage IV
Shewmr4_2297	PWY-4041	&gamma;-glutamyl cycle
Shewmr4_2297	PWY-5826	hypoglycin biosynthesis
Shewmr4_2298	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Shewmr4_2323	PWY-4381	fatty acid biosynthesis initiation I
Shewmr4_2323	PWY-5743	3-hydroxypropanoate cycle
Shewmr4_2323	PWY-5744	glyoxylate assimilation
Shewmr4_2323	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Shewmr4_2323	PWY-6679	jadomycin biosynthesis
Shewmr4_2323	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Shewmr4_2326	PWY-5074	mevalonate degradation
Shewmr4_2340	PWY-2941	L-lysine biosynthesis II
Shewmr4_2340	PWY-2942	L-lysine biosynthesis III
Shewmr4_2340	PWY-5097	L-lysine biosynthesis VI
Shewmr4_2348	PWY-4202	arsenate detoxification I (glutaredoxin)
Shewmr4_2348	PWY-4621	arsenate detoxification II (glutaredoxin)
Shewmr4_2356	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Shewmr4_2357	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Shewmr4_2359	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Shewmr4_2362	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Shewmr4_2362	PWY-7118	chitin degradation to ethanol
Shewmr4_2379	PWY-7183	pyrimidine nucleobases salvage I
Shewmr4_2380	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Shewmr4_2380	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Shewmr4_2380	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Shewmr4_2381	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Shewmr4_2381	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Shewmr4_2388	PWY-2723	trehalose degradation V
Shewmr4_2388	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Shewmr4_2388	PWY-5661	GDP-glucose biosynthesis
Shewmr4_2388	PWY-5940	streptomycin biosynthesis
Shewmr4_2388	PWY-621	sucrose degradation III (sucrose invertase)
Shewmr4_2388	PWY-622	starch biosynthesis
Shewmr4_2388	PWY-6731	starch degradation III
Shewmr4_2388	PWY-6737	starch degradation V
Shewmr4_2388	PWY-6981	chitin biosynthesis
Shewmr4_2388	PWY-7238	sucrose biosynthesis II
Shewmr4_2388	PWY-7343	UDP-glucose biosynthesis
Shewmr4_2396	PWY-5367	petroselinate biosynthesis
Shewmr4_2396	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Shewmr4_2396	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Shewmr4_2396	PWY-5989	stearate biosynthesis II (bacteria and plants)
Shewmr4_2396	PWY-5994	palmitate biosynthesis I (animals and fungi)
Shewmr4_2396	PWY-6113	superpathway of mycolate biosynthesis
Shewmr4_2396	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Shewmr4_2396	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Shewmr4_2396	PWY-6951	Shewmr4_2396
Shewmr4_2396	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Shewmr4_2396	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Shewmr4_2396	PWYG-321	mycolate biosynthesis
Shewmr4_2397	PWY-4381	fatty acid biosynthesis initiation I
Shewmr4_2397	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Shewmr4_2397	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Shewmr4_2398	PWY-4381	fatty acid biosynthesis initiation I
Shewmr4_2411	PWY-6556	pyrimidine ribonucleosides salvage II
Shewmr4_2411	PWY-7181	pyrimidine deoxyribonucleosides degradation
Shewmr4_2411	PWY-7193	pyrimidine ribonucleosides salvage I
Shewmr4_2411	PWY-7199	pyrimidine deoxyribonucleosides salvage
Shewmr4_2438	PWY-6168	flavin biosynthesis III (fungi)
Shewmr4_2438	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Shewmr4_2441	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewmr4_2441	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewmr4_2441	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewmr4_2497	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Shewmr4_2497	PWY-2201	folate transformations I
Shewmr4_2497	PWY-3841	folate transformations II
Shewmr4_2497	PWY-5030	L-histidine degradation III
Shewmr4_2497	PWY-5497	purine nucleobases degradation II (anaerobic)
Shewmr4_2497	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Shewmr4_2503	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Shewmr4_2506	PWY-5674	nitrate reduction IV (dissimilatory)
Shewmr4_2511	PWY-5674	nitrate reduction IV (dissimilatory)
Shewmr4_2517	PWY-5506	methanol oxidation to formaldehyde IV
Shewmr4_2531	PWY-6906	chitin derivatives degradation
Shewmr4_2531	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Shewmr4_2531	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Shewmr4_2541	PWY-6749	CMP-legionaminate biosynthesis I
Shewmr4_2548	PWY-4381	fatty acid biosynthesis initiation I
Shewmr4_2583	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Shewmr4_2583	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Shewmr4_2596	PWY-5642	2,4-dinitrotoluene degradation
Shewmr4_2596	PWY-6373	acrylate degradation
Shewmr4_2606	PWY-7158	L-phenylalanine degradation V
Shewmr4_2607	PWY-6134	L-tyrosine biosynthesis IV
Shewmr4_2607	PWY-7158	L-phenylalanine degradation V
Shewmr4_2608	PWY-3801	sucrose degradation II (sucrose synthase)
Shewmr4_2608	PWY-6527	stachyose degradation
Shewmr4_2608	PWY-6981	chitin biosynthesis
Shewmr4_2608	PWY-7238	sucrose biosynthesis II
Shewmr4_2608	PWY-7343	UDP-glucose biosynthesis
Shewmr4_2609	PWY-3821	galactose degradation III
Shewmr4_2609	PWY-6317	galactose degradation I (Leloir pathway)
Shewmr4_2609	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Shewmr4_2609	PWY-6527	stachyose degradation
Shewmr4_2609	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Shewmr4_2609	PWY-7344	UDP-D-galactose biosynthesis
Shewmr4_2630	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Shewmr4_2630	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Shewmr4_2630	PWY-5989	stearate biosynthesis II (bacteria and plants)
Shewmr4_2630	PWY-5994	palmitate biosynthesis I (animals and fungi)
Shewmr4_2630	PWY-6113	superpathway of mycolate biosynthesis
Shewmr4_2630	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Shewmr4_2630	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Shewmr4_2630	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Shewmr4_2630	PWYG-321	mycolate biosynthesis
Shewmr4_2635	PWY-7560	methylerythritol phosphate pathway II
Shewmr4_2647	PWY-2201	folate transformations I
Shewmr4_2647	PWY-5497	purine nucleobases degradation II (anaerobic)
Shewmr4_2648	PWY-7310	D-glucosaminate degradation
Shewmr4_2661	PWY-6700	queuosine biosynthesis
Shewmr4_2664	PWY-6012	acyl carrier protein metabolism I
Shewmr4_2664	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Shewmr4_2668	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Shewmr4_2668	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Shewmr4_2668	PWY-5989	stearate biosynthesis II (bacteria and plants)
Shewmr4_2668	PWY-5994	palmitate biosynthesis I (animals and fungi)
Shewmr4_2668	PWY-6113	superpathway of mycolate biosynthesis
Shewmr4_2668	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Shewmr4_2668	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Shewmr4_2668	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Shewmr4_2668	PWYG-321	mycolate biosynthesis
Shewmr4_2669	PWY-4381	fatty acid biosynthesis initiation I
Shewmr4_2669	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Shewmr4_2669	PWY-723	alkylnitronates degradation
Shewmr4_2669	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Shewmr4_2673	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Shewmr4_2673	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Shewmr4_2673	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Shewmr4_2699	PWY-5451	acetone degradation I (to methylglyoxal)
Shewmr4_2699	PWY-6588	pyruvate fermentation to acetone
Shewmr4_2699	PWY-6876	isopropanol biosynthesis
Shewmr4_2699	PWY-7466	acetone degradation III (to propane-1,2-diol)
Shewmr4_2731	PWY-6891	thiazole biosynthesis II (Bacillus)
Shewmr4_2731	PWY-6892	thiazole biosynthesis I (E. coli)
Shewmr4_2731	PWY-7560	methylerythritol phosphate pathway II
Shewmr4_2733	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Shewmr4_2733	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Shewmr4_2733	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Shewmr4_2735	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Shewmr4_2735	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Shewmr4_2754	PWY-622	starch biosynthesis
Shewmr4_2755	PWY-622	starch biosynthesis
Shewmr4_2756	PWY-5941	glycogen degradation II (eukaryotic)
Shewmr4_2756	PWY-622	starch biosynthesis
Shewmr4_2756	PWY-6731	starch degradation III
Shewmr4_2756	PWY-6737	starch degradation V
Shewmr4_2756	PWY-7238	sucrose biosynthesis II
Shewmr4_2758	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Shewmr4_2758	PWY-622	starch biosynthesis
Shewmr4_2759	PWY-5941	glycogen degradation II (eukaryotic)
Shewmr4_2759	PWY-6724	starch degradation II
Shewmr4_2759	PWY-6737	starch degradation V
Shewmr4_2759	PWY-7238	sucrose biosynthesis II
Shewmr4_2766	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Shewmr4_2767	PWY-6728	methylaspartate cycle
Shewmr4_2767	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Shewmr4_2767	PWY-7118	chitin degradation to ethanol
Shewmr4_2767	PWY-7294	xylose degradation IV
Shewmr4_2767	PWY-7295	L-arabinose degradation IV
Shewmr4_2805	PWY-6902	chitin degradation II
Shewmr4_2827	PWY-5988	wound-induced proteolysis I
Shewmr4_2827	PWY-6018	seed germination protein turnover
Shewmr4_2828	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Shewmr4_2828	PWY-3461	L-tyrosine biosynthesis II
Shewmr4_2828	PWY-3462	L-phenylalanine biosynthesis II
Shewmr4_2828	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Shewmr4_2828	PWY-6120	L-tyrosine biosynthesis III
Shewmr4_2828	PWY-6627	salinosporamide A biosynthesis
Shewmr4_2828	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Shewmr4_2833	PWY-3461	L-tyrosine biosynthesis II
Shewmr4_2833	PWY-3462	L-phenylalanine biosynthesis II
Shewmr4_2833	PWY-6120	L-tyrosine biosynthesis III
Shewmr4_2833	PWY-6627	salinosporamide A biosynthesis
Shewmr4_2833	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
Shewmr4_2834	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Shewmr4_2834	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Shewmr4_2834	PWY-6164	3-dehydroquinate biosynthesis I
Shewmr4_2836	PWY-6829	tRNA methylation (yeast)
Shewmr4_2836	PWY-7285	methylwyosine biosynthesis
Shewmr4_2836	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Shewmr4_2844	PWY-6012	acyl carrier protein metabolism I
Shewmr4_2844	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Shewmr4_2855	PWY-5316	nicotine biosynthesis
Shewmr4_2855	PWY-7342	superpathway of nicotine biosynthesis
Shewmr4_2861	PWY-3841	folate transformations II
Shewmr4_2861	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Shewmr4_2861	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewmr4_2861	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Shewmr4_2861	PWY-7199	pyrimidine deoxyribonucleosides salvage
Shewmr4_2861	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Shewmr4_2874	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Shewmr4_2874	PWY-6153	autoinducer AI-2 biosynthesis I
Shewmr4_2874	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
Shewmr4_2892	PWY-5686	UMP biosynthesis
Shewmr4_2893	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Shewmr4_2901	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Shewmr4_2901	PWY-6148	tetrahydromethanopterin biosynthesis
Shewmr4_2901	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Shewmr4_2901	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Shewmr4_2902	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Shewmr4_2902	PWY-6148	tetrahydromethanopterin biosynthesis
Shewmr4_2902	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Shewmr4_2902	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Shewmr4_2919	PWY-381	nitrate reduction II (assimilatory)
Shewmr4_2919	PWY-5675	nitrate reduction V (assimilatory)
Shewmr4_2919	PWY-6549	L-glutamine biosynthesis III
Shewmr4_2919	PWY-6963	ammonia assimilation cycle I
Shewmr4_2919	PWY-6964	ammonia assimilation cycle II
Shewmr4_2928	PWY-5642	2,4-dinitrotoluene degradation
Shewmr4_2928	PWY-6373	acrylate degradation
Shewmr4_2929	PWY-5692	allantoin degradation to glyoxylate II
Shewmr4_2929	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
Shewmr4_2933	PWY-6906	chitin derivatives degradation
Shewmr4_2933	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Shewmr4_2933	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Shewmr4_2936	PWY-6902	chitin degradation II
Shewmr4_2954	PWY-7560	methylerythritol phosphate pathway II
Shewmr4_2958	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Shewmr4_2958	PWY-6167	flavin biosynthesis II (archaea)
Shewmr4_2958	PWY-6168	flavin biosynthesis III (fungi)
Shewmr4_2967	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Shewmr4_2967	PWY-5723	Rubisco shunt
Shewmr4_2968	PWY-3801	sucrose degradation II (sucrose synthase)
Shewmr4_2968	PWY-5054	sorbitol biosynthesis I
Shewmr4_2968	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Shewmr4_2968	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Shewmr4_2968	PWY-5659	GDP-mannose biosynthesis
Shewmr4_2968	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Shewmr4_2968	PWY-621	sucrose degradation III (sucrose invertase)
Shewmr4_2968	PWY-622	starch biosynthesis
Shewmr4_2968	PWY-6531	mannitol cycle
Shewmr4_2968	PWY-6981	chitin biosynthesis
Shewmr4_2968	PWY-7238	sucrose biosynthesis II
Shewmr4_2968	PWY-7347	sucrose biosynthesis III
Shewmr4_2968	PWY-7385	1,3-propanediol biosynthesis (engineered)
Shewmr4_2975	PWY-6123	inosine-5'-phosphate biosynthesis I
Shewmr4_2975	PWY-7234	inosine-5'-phosphate biosynthesis III
Shewmr4_2980	PWY-6840	homoglutathione biosynthesis
Shewmr4_2980	PWY-7255	ergothioneine biosynthesis I (bacteria)
Shewmr4_2985	PWY-6339	syringate degradation
Shewmr4_2987	PWY-6339	syringate degradation
Shewmr4_2989	PWY-5669	phosphatidylethanolamine biosynthesis I
Shewmr4_3011	PWY-6936	seleno-amino acid biosynthesis
Shewmr4_3029	PWY-5506	methanol oxidation to formaldehyde IV
Shewmr4_3040	PWY-4061	glutathione-mediated detoxification I
Shewmr4_3040	PWY-6842	glutathione-mediated detoxification II
Shewmr4_3040	PWY-7112	4-hydroxy-2-nonenal detoxification
Shewmr4_3056	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Shewmr4_3069	PWY-5340	sulfate activation for sulfonation
Shewmr4_3071	PWY-5278	sulfite oxidation III
Shewmr4_3071	PWY-5340	sulfate activation for sulfonation
Shewmr4_3071	PWY-6683	sulfate reduction III (assimilatory)
Shewmr4_3071	PWY-6932	selenate reduction
Shewmr4_3072	PWY-5278	sulfite oxidation III
Shewmr4_3072	PWY-5340	sulfate activation for sulfonation
Shewmr4_3072	PWY-6683	sulfate reduction III (assimilatory)
Shewmr4_3072	PWY-6932	selenate reduction
Shewmr4_3073	PWY-5194	siroheme biosynthesis
Shewmr4_3073	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Shewmr4_3074	PWY-6803	phosphatidylcholine acyl editing
Shewmr4_3074	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
Shewmr4_3074	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
Shewmr4_3074	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
Shewmr4_3079	PWY-6683	sulfate reduction III (assimilatory)
Shewmr4_3080	PWY-6683	sulfate reduction III (assimilatory)
Shewmr4_3089	PWY-3781	aerobic respiration I (cytochrome c)
Shewmr4_3089	PWY-4521	arsenite oxidation I (respiratory)
Shewmr4_3089	PWY-6692	Fe(II) oxidation
Shewmr4_3089	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Shewmr4_3122	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Shewmr4_3122	PWY-6853	ethylene biosynthesis II (microbes)
Shewmr4_3122	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Shewmr4_3131	PWY-6823	molybdenum cofactor biosynthesis
Shewmr4_3131	PWY-6891	thiazole biosynthesis II (Bacillus)
Shewmr4_3131	PWY-6892	thiazole biosynthesis I (E. coli)
Shewmr4_3131	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Shewmr4_3133	PWY-7533	gliotoxin biosynthesis
Shewmr4_3145	PWY-6599	guanine and guanosine salvage II
Shewmr4_3145	PWY-6609	adenine and adenosine salvage III
Shewmr4_3145	PWY-6610	adenine and adenosine salvage IV
Shewmr4_3145	PWY-6620	guanine and guanosine salvage
Shewmr4_3158	PWY-6654	phosphopantothenate biosynthesis III
Shewmr4_3163	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Shewmr4_3163	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Shewmr4_3170	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Shewmr4_3172	PWY-7560	methylerythritol phosphate pathway II
Shewmr4_3247	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Shewmr4_3251	PWY-6759	hydrogen production III
Shewmr4_3251	PWY-6785	hydrogen production VIII
Shewmr4_3253	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Shewmr4_3255	PWY-5198	factor 420 biosynthesis
Shewmr4_3266	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Shewmr4_3287	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Shewmr4_3288	PWY-43	putrescine biosynthesis II
Shewmr4_3299	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Shewmr4_3299	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Shewmr4_3299	PWY-6936	seleno-amino acid biosynthesis
Shewmr4_3299	PWY-702	L-methionine biosynthesis II
Shewmr4_3339	PWY-1622	formaldehyde assimilation I (serine pathway)
Shewmr4_3339	PWY-5392	reductive TCA cycle II
Shewmr4_3339	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Shewmr4_3339	PWY-5690	TCA cycle II (plants and fungi)
Shewmr4_3339	PWY-5913	TCA cycle VI (obligate autotrophs)
Shewmr4_3339	PWY-6728	methylaspartate cycle
Shewmr4_3339	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Shewmr4_3339	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Shewmr4_3339	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Shewmr4_3344	PWY-4041	&gamma;-glutamyl cycle
Shewmr4_3344	PWY-5826	hypoglycin biosynthesis
Shewmr4_3358	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Shewmr4_3358	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Shewmr4_3358	PWY-6164	3-dehydroquinate biosynthesis I
Shewmr4_3369	PWY-5491	diethylphosphate degradation
Shewmr4_3370	PWY-5491	diethylphosphate degradation
Shewmr4_3408	PWY-3821	galactose degradation III
Shewmr4_3408	PWY-6317	galactose degradation I (Leloir pathway)
Shewmr4_3408	PWY-6527	stachyose degradation
Shewmr4_3409	PWY-2723	trehalose degradation V
Shewmr4_3409	PWY-6317	galactose degradation I (Leloir pathway)
Shewmr4_3409	PWY-6737	starch degradation V
Shewmr4_3437	PWY-2201	folate transformations I
Shewmr4_3437	PWY-3841	folate transformations II
Shewmr4_3438	PWY-2941	L-lysine biosynthesis II
Shewmr4_3438	PWY-2942	L-lysine biosynthesis III
Shewmr4_3438	PWY-5097	L-lysine biosynthesis VI
Shewmr4_3438	PWY-6559	spermidine biosynthesis II
Shewmr4_3438	PWY-6562	norspermidine biosynthesis
Shewmr4_3438	PWY-7153	grixazone biosynthesis
Shewmr4_3447	PWY-6123	inosine-5'-phosphate biosynthesis I
Shewmr4_3447	PWY-6124	inosine-5'-phosphate biosynthesis II
Shewmr4_3447	PWY-7234	inosine-5'-phosphate biosynthesis III
Shewmr4_3505	PWY-4202	arsenate detoxification I (glutaredoxin)
Shewmr4_3505	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Shewmr4_3505	PWY-6608	guanosine nucleotides degradation III
Shewmr4_3505	PWY-6609	adenine and adenosine salvage III
Shewmr4_3505	PWY-6611	adenine and adenosine salvage V
Shewmr4_3505	PWY-6620	guanine and guanosine salvage
Shewmr4_3505	PWY-6627	salinosporamide A biosynthesis
Shewmr4_3505	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Shewmr4_3505	PWY-7179	purine deoxyribonucleosides degradation I
Shewmr4_3505	PWY-7179-1	purine deoxyribonucleosides degradation
Shewmr4_3513	PWY-5674	nitrate reduction IV (dissimilatory)
Shewmr4_3551	PWY-5839	menaquinol-7 biosynthesis
Shewmr4_3551	PWY-5844	menaquinol-9 biosynthesis
Shewmr4_3551	PWY-5849	menaquinol-6 biosynthesis
Shewmr4_3551	PWY-5890	menaquinol-10 biosynthesis
Shewmr4_3551	PWY-5891	menaquinol-11 biosynthesis
Shewmr4_3551	PWY-5892	menaquinol-12 biosynthesis
Shewmr4_3551	PWY-5895	menaquinol-13 biosynthesis
Shewmr4_3560	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Shewmr4_3560	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Shewmr4_3569	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Shewmr4_3569	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Shewmr4_3570	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Shewmr4_3570	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Shewmr4_3570	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Shewmr4_3570	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Shewmr4_3572	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Shewmr4_3572	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Shewmr4_3573	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Shewmr4_3573	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Shewmr4_3573	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Shewmr4_3574	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Shewmr4_3574	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Shewmr4_3583	PWY-4261	glycerol degradation I
Shewmr4_3587	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Shewmr4_3588	PWY-6871	3-methylbutanol biosynthesis
Shewmr4_3594	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Shewmr4_3599	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Shewmr4_3599	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Shewmr4_3599	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Shewmr4_3599	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Shewmr4_3602	PWY-5663	tetrahydrobiopterin biosynthesis I
Shewmr4_3602	PWY-5664	tetrahydrobiopterin biosynthesis II
Shewmr4_3602	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Shewmr4_3602	PWY-6703	preQ<sub>0</sub> biosynthesis
Shewmr4_3602	PWY-6983	tetrahydrobiopterin biosynthesis III
Shewmr4_3602	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Shewmr4_3603	PWY-5686	UMP biosynthesis
Shewmr4_3613	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Shewmr4_3629	PWY-5747	2-methylcitrate cycle II
Shewmr4_3634	PWY-5057	L-valine degradation II
Shewmr4_3634	PWY-5076	L-leucine degradation III
Shewmr4_3634	PWY-5078	L-isoleucine degradation II
Shewmr4_3634	PWY-5101	L-isoleucine biosynthesis II
Shewmr4_3634	PWY-5103	L-isoleucine biosynthesis III
Shewmr4_3634	PWY-5104	L-isoleucine biosynthesis IV
Shewmr4_3634	PWY-5108	L-isoleucine biosynthesis V
Shewmr4_3667	PWY-46	putrescine biosynthesis III
Shewmr4_3667	PWY-6305	putrescine biosynthesis IV
Shewmr4_3686	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
Shewmr4_3691	PWY-181	photorespiration
Shewmr4_3692	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Shewmr4_3692	PWY-5723	Rubisco shunt
Shewmr4_3697	PWY-6164	3-dehydroquinate biosynthesis I
Shewmr4_3698	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Shewmr4_3705	PWY-4983	L-citrulline-nitric oxide cycle
Shewmr4_3705	PWY-4984	urea cycle
Shewmr4_3705	PWY-5	canavanine biosynthesis
Shewmr4_3705	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Shewmr4_3705	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Shewmr4_3706	PWY-4983	L-citrulline-nitric oxide cycle
Shewmr4_3706	PWY-4984	urea cycle
Shewmr4_3706	PWY-5	canavanine biosynthesis
Shewmr4_3706	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Shewmr4_3706	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Shewmr4_3707	PWY-4981	L-proline biosynthesis II (from arginine)
Shewmr4_3707	PWY-4984	urea cycle
Shewmr4_3707	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Shewmr4_3708	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Shewmr4_3708	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Shewmr4_3709	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Shewmr4_3709	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Shewmr4_3710	PWY-1622	formaldehyde assimilation I (serine pathway)
Shewmr4_3710	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Shewmr4_3710	PWY-5913	TCA cycle VI (obligate autotrophs)
Shewmr4_3710	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Shewmr4_3710	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Shewmr4_3710	PWY-6549	L-glutamine biosynthesis III
Shewmr4_3710	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Shewmr4_3710	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Shewmr4_3710	PWY-7124	ethylene biosynthesis V (engineered)
Shewmr4_3767	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Shewmr4_3767	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Shewmr4_3768	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Shewmr4_3768	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Shewmr4_3769	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Shewmr4_3769	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Shewmr4_3770	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Shewmr4_3770	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Shewmr4_3788	PWY-5667	CDP-diacylglycerol biosynthesis I
Shewmr4_3788	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
Shewmr4_3792	PWY-3781	aerobic respiration I (cytochrome c)
Shewmr4_3792	PWY-4521	arsenite oxidation I (respiratory)
Shewmr4_3792	PWY-6692	Fe(II) oxidation
Shewmr4_3792	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Shewmr4_3806	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Shewmr4_3824	PWY-3781	aerobic respiration I (cytochrome c)
Shewmr4_3824	PWY-4521	arsenite oxidation I (respiratory)
Shewmr4_3824	PWY-6692	Fe(II) oxidation
Shewmr4_3824	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Shewmr4_3824	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
Shewmr4_3845	PWY-4081	glutathione redox reactions I
Shewmr4_3852	PWY-6728	methylaspartate cycle
Shewmr4_3852	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Shewmr4_3852	PWY-7118	chitin degradation to ethanol
Shewmr4_3852	PWY-7294	xylose degradation IV
Shewmr4_3852	PWY-7295	L-arabinose degradation IV
Shewmr4_3868	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Shewmr4_3868	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Shewmr4_3868	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Shewmr4_3868	PWY-6406	salicylate biosynthesis I
Shewmr4_3877	PWY-5964	guanylyl molybdenum cofactor biosynthesis
Shewmr4_3878	PWY-6823	molybdenum cofactor biosynthesis
Shewmr4_3879	PWY-6823	molybdenum cofactor biosynthesis
Shewmr4_3885	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Shewmr4_3901	PWY-7378	aminopropanol phosphate biosynthesis II
Shewmr4_3912	PWY-6609	adenine and adenosine salvage III
Shewmr4_3912	PWY-6611	adenine and adenosine salvage V
Shewmr4_3912	PWY-7179	purine deoxyribonucleosides degradation I
Shewmr4_3912	PWY-7179-1	purine deoxyribonucleosides degradation
Shewmr4_3918	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Shewmr4_3918	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Shewmr4_3920	PWY-6749	CMP-legionaminate biosynthesis I
Shewmr4_3923	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Shewmr4_3925	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Shewmr4_3927	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis