Sama_0003	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Sama_0004	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Sama_0004	PWY-3162	L-tryptophan degradation V (side chain pathway)
Sama_0004	PWY-5057	L-valine degradation II
Sama_0004	PWY-5076	L-leucine degradation III
Sama_0004	PWY-5078	L-isoleucine degradation II
Sama_0004	PWY-5079	L-phenylalanine degradation III
Sama_0004	PWY-5082	L-methionine degradation III
Sama_0004	PWY-5480	pyruvate fermentation to ethanol I
Sama_0004	PWY-5486	pyruvate fermentation to ethanol II
Sama_0004	PWY-5751	phenylethanol biosynthesis
Sama_0004	PWY-6028	acetoin degradation
Sama_0004	PWY-6313	serotonin degradation
Sama_0004	PWY-6333	acetaldehyde biosynthesis I
Sama_0004	PWY-6342	noradrenaline and adrenaline degradation
Sama_0004	PWY-6587	pyruvate fermentation to ethanol III
Sama_0004	PWY-6802	salidroside biosynthesis
Sama_0004	PWY-6871	3-methylbutanol biosynthesis
Sama_0004	PWY-7013	L-1,2-propanediol degradation
Sama_0004	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Sama_0004	PWY-7118	chitin degradation to ethanol
Sama_0004	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Sama_0004	PWY-7557	dehydrodiconiferyl alcohol degradation
Sama_0031	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Sama_0031	PWY-6435	4-hydroxybenzoate biosynthesis V
Sama_0031	PWY-6863	pyruvate fermentation to hexanol
Sama_0031	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Sama_0031	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Sama_0031	PWY-6948	sitosterol degradation to androstenedione
Sama_0031	PWY-7094	fatty acid salvage
Sama_0031	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
Sama_0031	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
Sama_0031	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
Sama_0031	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
Sama_0031	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
Sama_0031	PWY-735	jasmonic acid biosynthesis
Sama_0032	PWY-1361	benzoyl-CoA degradation I (aerobic)
Sama_0032	PWY-5109	2-methylbutanoate biosynthesis
Sama_0032	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Sama_0032	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
Sama_0032	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Sama_0032	PWY-5177	glutaryl-CoA degradation
Sama_0032	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Sama_0032	PWY-6435	4-hydroxybenzoate biosynthesis V
Sama_0032	PWY-6583	pyruvate fermentation to butanol I
Sama_0032	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
Sama_0032	PWY-6863	pyruvate fermentation to hexanol
Sama_0032	PWY-6883	pyruvate fermentation to butanol II
Sama_0032	PWY-6944	androstenedione degradation
Sama_0032	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Sama_0032	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Sama_0032	PWY-7007	methyl ketone biosynthesis
Sama_0032	PWY-7046	4-coumarate degradation (anaerobic)
Sama_0032	PWY-7094	fatty acid salvage
Sama_0032	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Sama_0032	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
Sama_0032	PWY-735	jasmonic acid biosynthesis
Sama_0032	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Sama_0050	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Sama_0050	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Sama_0052	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Sama_0060	PWY-1042	glycolysis IV (plant cytosol)
Sama_0060	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Sama_0060	PWY-5484	glycolysis II (from fructose 6-phosphate)
Sama_0060	PWY-5723	Rubisco shunt
Sama_0060	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Sama_0060	PWY-6886	1-butanol autotrophic biosynthesis
Sama_0060	PWY-6901	superpathway of glucose and xylose degradation
Sama_0060	PWY-7003	glycerol degradation to butanol
Sama_0060	PWY-7124	ethylene biosynthesis V (engineered)
Sama_0060	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Sama_0063	PWY-5667	CDP-diacylglycerol biosynthesis I
Sama_0063	PWY-5981	CDP-diacylglycerol biosynthesis III
Sama_0080	PWY-5028	L-histidine degradation II
Sama_0080	PWY-5030	L-histidine degradation III
Sama_0085	PWY-6609	adenine and adenosine salvage III
Sama_0085	PWY-6611	adenine and adenosine salvage V
Sama_0085	PWY-7179	purine deoxyribonucleosides degradation I
Sama_0085	PWY-7179-1	purine deoxyribonucleosides degradation
Sama_0097	PWY-7378	aminopropanol phosphate biosynthesis II
Sama_0119	PWY-6823	molybdenum cofactor biosynthesis
Sama_0120	PWY-6823	molybdenum cofactor biosynthesis
Sama_0121	PWY-5964	guanylyl molybdenum cofactor biosynthesis
Sama_0130	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Sama_0130	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Sama_0130	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Sama_0130	PWY-6406	salicylate biosynthesis I
Sama_0137	PWY-6823	molybdenum cofactor biosynthesis
Sama_0138	PWY-6823	molybdenum cofactor biosynthesis
Sama_0143	PWY-6167	flavin biosynthesis II (archaea)
Sama_0143	PWY-6168	flavin biosynthesis III (fungi)
Sama_0163	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Sama_0165	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Sama_0165	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Sama_0190	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Sama_0194	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Sama_0194	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Sama_0196	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Sama_0196	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Sama_0197	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Sama_0197	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Sama_0198	PWY-3961	phosphopantothenate biosynthesis II
Sama_0254	PWY-1622	formaldehyde assimilation I (serine pathway)
Sama_0254	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Sama_0254	PWY-5913	TCA cycle VI (obligate autotrophs)
Sama_0254	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Sama_0254	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Sama_0254	PWY-6549	L-glutamine biosynthesis III
Sama_0254	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Sama_0254	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Sama_0254	PWY-7124	ethylene biosynthesis V (engineered)
Sama_0255	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Sama_0256	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Sama_0256	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Sama_0257	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Sama_0257	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Sama_0258	PWY-4981	L-proline biosynthesis II (from arginine)
Sama_0258	PWY-4984	urea cycle
Sama_0258	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Sama_0259	PWY-4983	L-citrulline-nitric oxide cycle
Sama_0259	PWY-4984	urea cycle
Sama_0259	PWY-5	canavanine biosynthesis
Sama_0259	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Sama_0259	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Sama_0260	PWY-4983	L-citrulline-nitric oxide cycle
Sama_0260	PWY-4984	urea cycle
Sama_0260	PWY-5	canavanine biosynthesis
Sama_0260	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Sama_0260	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Sama_0266	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Sama_0321	PWY-5686	UMP biosynthesis
Sama_0322	PWY-5663	tetrahydrobiopterin biosynthesis I
Sama_0322	PWY-5664	tetrahydrobiopterin biosynthesis II
Sama_0322	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Sama_0322	PWY-6703	preQ<sub>0</sub> biosynthesis
Sama_0322	PWY-6983	tetrahydrobiopterin biosynthesis III
Sama_0322	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Sama_0325	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Sama_0325	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Sama_0325	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sama_0325	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Sama_0330	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Sama_0335	PWY-6871	3-methylbutanol biosynthesis
Sama_0336	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Sama_0341	PWY-4261	glycerol degradation I
Sama_0350	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Sama_0350	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Sama_0351	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Sama_0351	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Sama_0351	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Sama_0352	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Sama_0352	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Sama_0354	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Sama_0354	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Sama_0354	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Sama_0354	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Sama_0355	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Sama_0355	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Sama_0363	PWY-6502	oxidized GTP and dGTP detoxification
Sama_0371	PWY-5316	nicotine biosynthesis
Sama_0371	PWY-5381	pyridine nucleotide cycling (plants)
Sama_0371	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Sama_0371	PWY-7342	superpathway of nicotine biosynthesis
Sama_0375	PWY-6891	thiazole biosynthesis II (Bacillus)
Sama_0375	PWY-6892	thiazole biosynthesis I (E. coli)
Sama_0375	PWY-7560	methylerythritol phosphate pathway II
Sama_0377	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Sama_0377	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Sama_0382	PWY-5747	2-methylcitrate cycle II
Sama_0387	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Sama_0387	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Sama_0394	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Sama_0394	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Sama_0394	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Sama_0395	PWY-6123	inosine-5'-phosphate biosynthesis I
Sama_0395	PWY-6124	inosine-5'-phosphate biosynthesis II
Sama_0395	PWY-7234	inosine-5'-phosphate biosynthesis III
Sama_0412	PWY-4202	arsenate detoxification I (glutaredoxin)
Sama_0412	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Sama_0412	PWY-6608	guanosine nucleotides degradation III
Sama_0412	PWY-6609	adenine and adenosine salvage III
Sama_0412	PWY-6611	adenine and adenosine salvage V
Sama_0412	PWY-6620	guanine and guanosine salvage
Sama_0412	PWY-6627	salinosporamide A biosynthesis
Sama_0412	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Sama_0412	PWY-7179	purine deoxyribonucleosides degradation I
Sama_0412	PWY-7179-1	purine deoxyribonucleosides degradation
Sama_0491	PWY-6123	inosine-5'-phosphate biosynthesis I
Sama_0491	PWY-6124	inosine-5'-phosphate biosynthesis II
Sama_0491	PWY-7234	inosine-5'-phosphate biosynthesis III
Sama_0494	PWY-1042	glycolysis IV (plant cytosol)
Sama_0494	PWY-5484	glycolysis II (from fructose 6-phosphate)
Sama_0494	PWY-6901	superpathway of glucose and xylose degradation
Sama_0494	PWY-7003	glycerol degradation to butanol
Sama_0502	PWY-5491	diethylphosphate degradation
Sama_0535	PWY-2723	trehalose degradation V
Sama_0535	PWY-6317	galactose degradation I (Leloir pathway)
Sama_0535	PWY-6737	starch degradation V
Sama_0536	PWY-3821	galactose degradation III
Sama_0536	PWY-6317	galactose degradation I (Leloir pathway)
Sama_0536	PWY-6527	stachyose degradation
Sama_0573	PWY-5491	diethylphosphate degradation
Sama_0580	PWY-4381	fatty acid biosynthesis initiation I
Sama_0580	PWY-5743	3-hydroxypropanoate cycle
Sama_0580	PWY-5744	glyoxylate assimilation
Sama_0580	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Sama_0580	PWY-6679	jadomycin biosynthesis
Sama_0580	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Sama_0599	PWY-5484	glycolysis II (from fructose 6-phosphate)
Sama_0603	PWY-2941	L-lysine biosynthesis II
Sama_0603	PWY-2942	L-lysine biosynthesis III
Sama_0603	PWY-5097	L-lysine biosynthesis VI
Sama_0603	PWY-6559	spermidine biosynthesis II
Sama_0603	PWY-6562	norspermidine biosynthesis
Sama_0603	PWY-7153	grixazone biosynthesis
Sama_0616	PWY-5988	wound-induced proteolysis I
Sama_0616	PWY-6018	seed germination protein turnover
Sama_0629	PWY-4261	glycerol degradation I
Sama_0629	PWY-6118	glycerol-3-phosphate shuttle
Sama_0629	PWY-6952	glycerophosphodiester degradation
Sama_0648	PWY-5674	nitrate reduction IV (dissimilatory)
Sama_0657	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Sama_0657	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Sama_0657	PWY-6164	3-dehydroquinate biosynthesis I
Sama_0669	PWY-4041	&gamma;-glutamyl cycle
Sama_0669	PWY-5826	hypoglycin biosynthesis
Sama_0672	PWY-1622	formaldehyde assimilation I (serine pathway)
Sama_0672	PWY-5392	reductive TCA cycle II
Sama_0672	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Sama_0672	PWY-5690	TCA cycle II (plants and fungi)
Sama_0672	PWY-5913	TCA cycle VI (obligate autotrophs)
Sama_0672	PWY-6728	methylaspartate cycle
Sama_0672	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Sama_0672	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Sama_0672	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Sama_0681	PWY-6728	methylaspartate cycle
Sama_0681	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Sama_0681	PWY-7118	chitin degradation to ethanol
Sama_0681	PWY-7294	xylose degradation IV
Sama_0681	PWY-7295	L-arabinose degradation IV
Sama_0728	PWY-3781	aerobic respiration I (cytochrome c)
Sama_0728	PWY-4521	arsenite oxidation I (respiratory)
Sama_0728	PWY-6692	Fe(II) oxidation
Sama_0728	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Sama_0743	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Sama_0750	PWY-5506	methanol oxidation to formaldehyde IV
Sama_0758	PWY-2201	folate transformations I
Sama_0758	PWY-3841	folate transformations II
Sama_0762	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Sama_0762	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Sama_0762	PWY-6269	adenosylcobalamin salvage from cobinamide II
Sama_0763	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Sama_0763	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Sama_0763	PWY-6269	adenosylcobalamin salvage from cobinamide II
Sama_0764	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Sama_0764	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Sama_0764	PWY-6269	adenosylcobalamin salvage from cobinamide II
Sama_0766	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Sama_0766	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Sama_0766	PWY-6268	adenosylcobalamin salvage from cobalamin
Sama_0766	PWY-6269	adenosylcobalamin salvage from cobinamide II
Sama_0771	PWY-6599	guanine and guanosine salvage II
Sama_0771	PWY-6609	adenine and adenosine salvage III
Sama_0771	PWY-6610	adenine and adenosine salvage IV
Sama_0771	PWY-6620	guanine and guanosine salvage
Sama_0776	PWY-6654	phosphopantothenate biosynthesis III
Sama_0777	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Sama_0777	PWY-6148	tetrahydromethanopterin biosynthesis
Sama_0777	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Sama_0777	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Sama_0782	PWY-5988	wound-induced proteolysis I
Sama_0782	PWY-6018	seed germination protein turnover
Sama_0789	PWY-5392	reductive TCA cycle II
Sama_0789	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Sama_0789	PWY-5690	TCA cycle II (plants and fungi)
Sama_0789	PWY-5913	TCA cycle VI (obligate autotrophs)
Sama_0789	PWY-6728	methylaspartate cycle
Sama_0789	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Sama_0789	PWY-7254	TCA cycle VII (acetate-producers)
Sama_0789	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Sama_0795	PWY-5988	wound-induced proteolysis I
Sama_0795	PWY-6018	seed germination protein turnover
Sama_0822	PWY-5392	reductive TCA cycle II
Sama_0822	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Sama_0822	PWY-5690	TCA cycle II (plants and fungi)
Sama_0822	PWY-5913	TCA cycle VI (obligate autotrophs)
Sama_0822	PWY-6728	methylaspartate cycle
Sama_0822	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Sama_0822	PWY-7254	TCA cycle VII (acetate-producers)
Sama_0822	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Sama_0829	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Sama_0829	PWY-6148	tetrahydromethanopterin biosynthesis
Sama_0829	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Sama_0829	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Sama_0830	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Sama_0830	PWY-6148	tetrahydromethanopterin biosynthesis
Sama_0830	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Sama_0830	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Sama_0839	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Sama_0840	PWY-5686	UMP biosynthesis
Sama_0855	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Sama_0855	PWY-6153	autoinducer AI-2 biosynthesis I
Sama_0855	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
Sama_0867	PWY-3841	folate transformations II
Sama_0867	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Sama_0867	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sama_0867	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Sama_0867	PWY-7199	pyrimidine deoxyribonucleosides salvage
Sama_0867	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Sama_0873	PWY-5316	nicotine biosynthesis
Sama_0873	PWY-7342	superpathway of nicotine biosynthesis
Sama_0884	PWY-6012	acyl carrier protein metabolism I
Sama_0884	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Sama_0891	PWY-6829	tRNA methylation (yeast)
Sama_0891	PWY-7285	methylwyosine biosynthesis
Sama_0891	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Sama_0893	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Sama_0893	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Sama_0893	PWY-6164	3-dehydroquinate biosynthesis I
Sama_0894	PWY-3461	L-tyrosine biosynthesis II
Sama_0894	PWY-3462	L-phenylalanine biosynthesis II
Sama_0894	PWY-6120	L-tyrosine biosynthesis III
Sama_0894	PWY-6627	salinosporamide A biosynthesis
Sama_0894	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
Sama_0898	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Sama_0898	PWY-3461	L-tyrosine biosynthesis II
Sama_0898	PWY-3462	L-phenylalanine biosynthesis II
Sama_0898	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Sama_0898	PWY-6120	L-tyrosine biosynthesis III
Sama_0898	PWY-6627	salinosporamide A biosynthesis
Sama_0898	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Sama_0905	PWY-2941	L-lysine biosynthesis II
Sama_0905	PWY-2942	L-lysine biosynthesis III
Sama_0905	PWY-5097	L-lysine biosynthesis VI
Sama_0905	PWY-6559	spermidine biosynthesis II
Sama_0905	PWY-6562	norspermidine biosynthesis
Sama_0905	PWY-7153	grixazone biosynthesis
Sama_0906	PWY-702	L-methionine biosynthesis II
Sama_0912	PWY-3801	sucrose degradation II (sucrose synthase)
Sama_0912	PWY-5054	sorbitol biosynthesis I
Sama_0912	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Sama_0912	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Sama_0912	PWY-5659	GDP-mannose biosynthesis
Sama_0912	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Sama_0912	PWY-621	sucrose degradation III (sucrose invertase)
Sama_0912	PWY-622	starch biosynthesis
Sama_0912	PWY-6531	mannitol cycle
Sama_0912	PWY-6981	chitin biosynthesis
Sama_0912	PWY-7238	sucrose biosynthesis II
Sama_0912	PWY-7347	sucrose biosynthesis III
Sama_0912	PWY-7385	1,3-propanediol biosynthesis (engineered)
Sama_0913	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Sama_0913	PWY-5723	Rubisco shunt
Sama_0923	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Sama_0923	PWY-6167	flavin biosynthesis II (archaea)
Sama_0923	PWY-6168	flavin biosynthesis III (fungi)
Sama_0927	PWY-7560	methylerythritol phosphate pathway II
Sama_0943	PWY-6902	chitin degradation II
Sama_0946	PWY-6906	chitin derivatives degradation
Sama_0946	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Sama_0946	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Sama_0955	PWY-6614	tetrahydrofolate biosynthesis
Sama_0956	PWY-6749	CMP-legionaminate biosynthesis I
Sama_0957	PWY-1042	glycolysis IV (plant cytosol)
Sama_0957	PWY-5484	glycolysis II (from fructose 6-phosphate)
Sama_0957	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Sama_0957	PWY-7003	glycerol degradation to butanol
Sama_0973	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Sama_0974	PWY-7181	pyrimidine deoxyribonucleosides degradation
Sama_0975	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Sama_0976	PWY-4202	arsenate detoxification I (glutaredoxin)
Sama_0976	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Sama_0976	PWY-6608	guanosine nucleotides degradation III
Sama_0976	PWY-6609	adenine and adenosine salvage III
Sama_0976	PWY-6611	adenine and adenosine salvage V
Sama_0976	PWY-6620	guanine and guanosine salvage
Sama_0976	PWY-6627	salinosporamide A biosynthesis
Sama_0976	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Sama_0976	PWY-7179	purine deoxyribonucleosides degradation I
Sama_0976	PWY-7179-1	purine deoxyribonucleosides degradation
Sama_1014	PWY-1622	formaldehyde assimilation I (serine pathway)
Sama_1014	PWY-181	photorespiration
Sama_1014	PWY-2161	folate polyglutamylation
Sama_1014	PWY-2201	folate transformations I
Sama_1014	PWY-3661	glycine betaine degradation I
Sama_1014	PWY-3661-1	glycine betaine degradation II (mammalian)
Sama_1014	PWY-3841	folate transformations II
Sama_1014	PWY-5497	purine nucleobases degradation II (anaerobic)
Sama_1017	PWY-6167	flavin biosynthesis II (archaea)
Sama_1017	PWY-6168	flavin biosynthesis III (fungi)
Sama_1017	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Sama_1018	PWY-6167	flavin biosynthesis II (archaea)
Sama_1018	PWY-6168	flavin biosynthesis III (fungi)
Sama_1018	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Sama_1019	PWY-6167	flavin biosynthesis II (archaea)
Sama_1019	PWY-6168	flavin biosynthesis III (fungi)
Sama_1021	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Sama_1021	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Sama_1021	PWY-6896	thiamin salvage I
Sama_1021	PWY-6897	thiamin salvage II
Sama_1022	PWY-5269	cardiolipin biosynthesis II
Sama_1022	PWY-5668	cardiolipin biosynthesis I
Sama_1035	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Sama_1035	PWY-7177	UTP and CTP dephosphorylation II
Sama_1035	PWY-7185	UTP and CTP dephosphorylation I
Sama_1036	PWY-1042	glycolysis IV (plant cytosol)
Sama_1036	PWY-1622	formaldehyde assimilation I (serine pathway)
Sama_1036	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Sama_1036	PWY-5484	glycolysis II (from fructose 6-phosphate)
Sama_1036	PWY-5723	Rubisco shunt
Sama_1036	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Sama_1036	PWY-6886	1-butanol autotrophic biosynthesis
Sama_1036	PWY-6901	superpathway of glucose and xylose degradation
Sama_1036	PWY-7003	glycerol degradation to butanol
Sama_1036	PWY-7124	ethylene biosynthesis V (engineered)
Sama_1036	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Sama_1038	PWY-7560	methylerythritol phosphate pathway II
Sama_1039	PWY-7560	methylerythritol phosphate pathway II
Sama_1041	PWY-5381	pyridine nucleotide cycling (plants)
Sama_1041	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Sama_1041	PWY-6596	adenosine nucleotides degradation I
Sama_1041	PWY-6606	guanosine nucleotides degradation II
Sama_1041	PWY-6607	guanosine nucleotides degradation I
Sama_1041	PWY-6608	guanosine nucleotides degradation III
Sama_1041	PWY-7185	UTP and CTP dephosphorylation I
Sama_1049	PWY-2941	L-lysine biosynthesis II
Sama_1049	PWY-2942	L-lysine biosynthesis III
Sama_1049	PWY-5097	L-lysine biosynthesis VI
Sama_1049	PWY-6559	spermidine biosynthesis II
Sama_1049	PWY-6562	norspermidine biosynthesis
Sama_1049	PWY-7153	grixazone biosynthesis
Sama_1051	PWY-6339	syringate degradation
Sama_1053	PWY-6339	syringate degradation
Sama_1058	PWY-6840	homoglutathione biosynthesis
Sama_1058	PWY-7255	ergothioneine biosynthesis I (bacteria)
Sama_1064	PWY-6123	inosine-5'-phosphate biosynthesis I
Sama_1064	PWY-7234	inosine-5'-phosphate biosynthesis III
Sama_1112	PWY-4381	fatty acid biosynthesis initiation I
Sama_1112	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Sama_1112	PWY-723	alkylnitronates degradation
Sama_1112	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Sama_1113	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Sama_1113	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Sama_1113	PWY-5989	stearate biosynthesis II (bacteria and plants)
Sama_1113	PWY-5994	palmitate biosynthesis I (animals and fungi)
Sama_1113	PWY-6113	superpathway of mycolate biosynthesis
Sama_1113	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Sama_1113	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Sama_1113	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Sama_1113	PWYG-321	mycolate biosynthesis
Sama_1119	PWY-6012	acyl carrier protein metabolism I
Sama_1119	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Sama_1120	PWY-6700	queuosine biosynthesis
Sama_1133	PWY-7310	D-glucosaminate degradation
Sama_1134	PWY-2201	folate transformations I
Sama_1134	PWY-5497	purine nucleobases degradation II (anaerobic)
Sama_1145	PWY-7560	methylerythritol phosphate pathway II
Sama_1150	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Sama_1150	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Sama_1150	PWY-5989	stearate biosynthesis II (bacteria and plants)
Sama_1150	PWY-5994	palmitate biosynthesis I (animals and fungi)
Sama_1150	PWY-6113	superpathway of mycolate biosynthesis
Sama_1150	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Sama_1150	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Sama_1150	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Sama_1150	PWYG-321	mycolate biosynthesis
Sama_1173	PWY-7199	pyrimidine deoxyribonucleosides salvage
Sama_1174	PWY-381	nitrate reduction II (assimilatory)
Sama_1174	PWY-5675	nitrate reduction V (assimilatory)
Sama_1174	PWY-6549	L-glutamine biosynthesis III
Sama_1174	PWY-6963	ammonia assimilation cycle I
Sama_1174	PWY-6964	ammonia assimilation cycle II
Sama_1182	PWY-4381	fatty acid biosynthesis initiation I
Sama_1189	PWY-6749	CMP-legionaminate biosynthesis I
Sama_1198	PWY-6906	chitin derivatives degradation
Sama_1198	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Sama_1198	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Sama_1207	PWY-5674	nitrate reduction IV (dissimilatory)
Sama_1208	PWY-5674	nitrate reduction IV (dissimilatory)
Sama_1210	PWY-5674	nitrate reduction IV (dissimilatory)
Sama_1213	PWY-5674	nitrate reduction IV (dissimilatory)
Sama_1216	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Sama_1222	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Sama_1222	PWY-2201	folate transformations I
Sama_1222	PWY-3841	folate transformations II
Sama_1222	PWY-5030	L-histidine degradation III
Sama_1222	PWY-5497	purine nucleobases degradation II (anaerobic)
Sama_1222	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Sama_1275	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sama_1275	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sama_1275	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sama_1277	PWY-6168	flavin biosynthesis III (fungi)
Sama_1277	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Sama_1289	PWY-2301	<i>myo</i>-inositol biosynthesis
Sama_1289	PWY-4702	phytate degradation I
Sama_1289	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Sama_1291	PWY-6936	seleno-amino acid biosynthesis
Sama_1291	PWY-7274	D-cycloserine biosynthesis
Sama_1293	PWY-6823	molybdenum cofactor biosynthesis
Sama_1293	PWY-6891	thiazole biosynthesis II (Bacillus)
Sama_1293	PWY-6892	thiazole biosynthesis I (E. coli)
Sama_1293	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Sama_1301	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Sama_1301	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Sama_1301	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Sama_1301	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sama_1301	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Sama_1301	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Sama_1301	PWY-7205	CMP phosphorylation
Sama_1301	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Sama_1301	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sama_1301	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Sama_1301	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sama_1301	PWY-7224	purine deoxyribonucleosides salvage
Sama_1301	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Sama_1301	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Sama_1309	PWY-6605	adenine and adenosine salvage II
Sama_1309	PWY-6610	adenine and adenosine salvage IV
Sama_1315	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Sama_1358	PWY-5074	mevalonate degradation
Sama_1361	PWY-4381	fatty acid biosynthesis initiation I
Sama_1361	PWY-5743	3-hydroxypropanoate cycle
Sama_1361	PWY-5744	glyoxylate assimilation
Sama_1361	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Sama_1361	PWY-6679	jadomycin biosynthesis
Sama_1361	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Sama_1366	PWY-5839	menaquinol-7 biosynthesis
Sama_1366	PWY-5851	demethylmenaquinol-9 biosynthesis
Sama_1366	PWY-5852	demethylmenaquinol-8 biosynthesis I
Sama_1366	PWY-5853	demethylmenaquinol-6 biosynthesis I
Sama_1366	PWY-5890	menaquinol-10 biosynthesis
Sama_1366	PWY-5891	menaquinol-11 biosynthesis
Sama_1366	PWY-5892	menaquinol-12 biosynthesis
Sama_1366	PWY-5895	menaquinol-13 biosynthesis
Sama_1376	PWY-5642	2,4-dinitrotoluene degradation
Sama_1376	PWY-6373	acrylate degradation
Sama_1402	PWY-3121	linamarin degradation
Sama_1402	PWY-5176	coumarin biosynthesis (via 2-coumarate)
Sama_1402	PWY-6002	lotaustralin degradation
Sama_1402	PWY-6788	cellulose degradation II (fungi)
Sama_1402	PWY-7089	taxiphyllin bioactivation
Sama_1402	PWY-7091	linustatin bioactivation
Sama_1402	PWY-7092	neolinustatin bioactivation
Sama_1413	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Sama_1425	PWY-3781	aerobic respiration I (cytochrome c)
Sama_1425	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Sama_1425	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Sama_1425	PWY-5690	TCA cycle II (plants and fungi)
Sama_1425	PWY-6728	methylaspartate cycle
Sama_1425	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Sama_1425	PWY-7254	TCA cycle VII (acetate-producers)
Sama_1425	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Sama_1426	PWY-3781	aerobic respiration I (cytochrome c)
Sama_1426	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Sama_1426	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Sama_1426	PWY-5690	TCA cycle II (plants and fungi)
Sama_1426	PWY-6728	methylaspartate cycle
Sama_1426	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Sama_1426	PWY-7254	TCA cycle VII (acetate-producers)
Sama_1426	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Sama_1427	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Sama_1428	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Sama_1429	PWY-5392	reductive TCA cycle II
Sama_1429	PWY-5537	pyruvate fermentation to acetate V
Sama_1429	PWY-5538	pyruvate fermentation to acetate VI
Sama_1429	PWY-5690	TCA cycle II (plants and fungi)
Sama_1429	PWY-5913	TCA cycle VI (obligate autotrophs)
Sama_1429	PWY-6728	methylaspartate cycle
Sama_1429	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Sama_1429	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Sama_1430	PWY-5392	reductive TCA cycle II
Sama_1430	PWY-5537	pyruvate fermentation to acetate V
Sama_1430	PWY-5538	pyruvate fermentation to acetate VI
Sama_1430	PWY-5690	TCA cycle II (plants and fungi)
Sama_1430	PWY-5913	TCA cycle VI (obligate autotrophs)
Sama_1430	PWY-6728	methylaspartate cycle
Sama_1430	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Sama_1430	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Sama_1438	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Sama_1441	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Sama_1489	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Sama_1489	PWY-6148	tetrahydromethanopterin biosynthesis
Sama_1489	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Sama_1489	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Sama_1494	PWY-1281	sulfoacetaldehyde degradation I
Sama_1494	PWY-5482	pyruvate fermentation to acetate II
Sama_1494	PWY-5485	pyruvate fermentation to acetate IV
Sama_1494	PWY-5497	purine nucleobases degradation II (anaerobic)
Sama_1494	PWY-6637	sulfolactate degradation II
Sama_1495	PWY-5482	pyruvate fermentation to acetate II
Sama_1495	PWY-5485	pyruvate fermentation to acetate IV
Sama_1495	PWY-5497	purine nucleobases degradation II (anaerobic)
Sama_1498	PWY-5480	pyruvate fermentation to ethanol I
Sama_1498	PWY-5485	pyruvate fermentation to acetate IV
Sama_1498	PWY-5493	reductive monocarboxylic acid cycle
Sama_1508	PWY-6936	seleno-amino acid biosynthesis
Sama_1510	PWY-4381	fatty acid biosynthesis initiation I
Sama_1512	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Sama_1527	PWY-4381	fatty acid biosynthesis initiation I
Sama_1531	PWY-2941	L-lysine biosynthesis II
Sama_1531	PWY-2942	L-lysine biosynthesis III
Sama_1531	PWY-5097	L-lysine biosynthesis VI
Sama_1566	PWY-4041	&gamma;-glutamyl cycle
Sama_1566	PWY-5826	hypoglycin biosynthesis
Sama_1592	PWY-5022	4-aminobutanoate degradation V
Sama_1592	PWY-6728	methylaspartate cycle
Sama_1592	PWY-7126	ethylene biosynthesis IV
Sama_1593	PWY-5686	UMP biosynthesis
Sama_1605	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Sama_1605	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Sama_1605	PWY-5989	stearate biosynthesis II (bacteria and plants)
Sama_1605	PWY-5994	palmitate biosynthesis I (animals and fungi)
Sama_1605	PWY-6113	superpathway of mycolate biosynthesis
Sama_1605	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Sama_1605	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Sama_1605	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Sama_1605	PWYG-321	mycolate biosynthesis
Sama_1609	PWY-5269	cardiolipin biosynthesis II
Sama_1609	PWY-5668	cardiolipin biosynthesis I
Sama_1631	PWY-5028	L-histidine degradation II
Sama_1631	PWY-5030	L-histidine degradation III
Sama_1632	PWY-5028	L-histidine degradation II
Sama_1632	PWY-5030	L-histidine degradation III
Sama_1639	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Sama_1639	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Sama_1642	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Sama_1642	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Sama_1642	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Sama_1642	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Sama_1656	PWY-5767	Sama_1656|Sama_1656|YP_927532.1|GeneID:4603907
Sama_1687	PWY-5958	acridone alkaloid biosynthesis
Sama_1687	PWY-6543	4-aminobenzoate biosynthesis
Sama_1687	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Sama_1687	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Sama_1687	PWY-6722	candicidin biosynthesis
Sama_1688	PWY-5392	reductive TCA cycle II
Sama_1688	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Sama_1688	PWY-5690	TCA cycle II (plants and fungi)
Sama_1688	PWY-5913	TCA cycle VI (obligate autotrophs)
Sama_1688	PWY-6728	methylaspartate cycle
Sama_1688	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Sama_1688	PWY-7254	TCA cycle VII (acetate-producers)
Sama_1688	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Sama_1693	PWY-3162	L-tryptophan degradation V (side chain pathway)
Sama_1693	PWY-5057	L-valine degradation II
Sama_1693	PWY-5076	L-leucine degradation III
Sama_1693	PWY-5078	L-isoleucine degradation II
Sama_1693	PWY-5079	L-phenylalanine degradation III
Sama_1693	PWY-5082	L-methionine degradation III
Sama_1693	PWY-5162	2-oxopentenoate degradation
Sama_1693	PWY-5436	L-threonine degradation IV
Sama_1693	PWY-5480	pyruvate fermentation to ethanol I
Sama_1693	PWY-5486	pyruvate fermentation to ethanol II
Sama_1693	PWY-5751	phenylethanol biosynthesis
Sama_1693	PWY-6028	acetoin degradation
Sama_1693	PWY-6313	serotonin degradation
Sama_1693	PWY-6333	acetaldehyde biosynthesis I
Sama_1693	PWY-6342	noradrenaline and adrenaline degradation
Sama_1693	PWY-6587	pyruvate fermentation to ethanol III
Sama_1693	PWY-6802	salidroside biosynthesis
Sama_1693	PWY-6871	3-methylbutanol biosynthesis
Sama_1693	PWY-7013	L-1,2-propanediol degradation
Sama_1693	PWY-7085	triethylamine degradation
Sama_1693	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Sama_1693	PWY-7118	chitin degradation to ethanol
Sama_1693	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Sama_1693	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Sama_1693	PWY-7557	dehydrodiconiferyl alcohol degradation
Sama_1706	PWY-2723	trehalose degradation V
Sama_1706	PWY-3801	sucrose degradation II (sucrose synthase)
Sama_1706	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Sama_1706	PWY-5661	GDP-glucose biosynthesis
Sama_1706	PWY-5661-1	Sama_1706|Sama_1706|YP_927582.1|GeneID:4603957
Sama_1706	PWY-5940	streptomycin biosynthesis
Sama_1706	PWY-5941	glycogen degradation II (eukaryotic)
Sama_1706	PWY-622	starch biosynthesis
Sama_1706	PWY-6731	starch degradation III
Sama_1706	PWY-6737	starch degradation V
Sama_1706	PWY-6749	CMP-legionaminate biosynthesis I
Sama_1706	PWY-7238	sucrose biosynthesis II
Sama_1706	PWY-7343	UDP-glucose biosynthesis
Sama_1711	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Sama_1712	PWY-5316	nicotine biosynthesis
Sama_1712	PWY-7342	superpathway of nicotine biosynthesis
Sama_1727	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Sama_1727	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Sama_1727	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Sama_1727	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Sama_1727	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sama_1727	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sama_1727	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Sama_1727	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Sama_1728	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Sama_1728	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Sama_1728	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Sama_1728	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Sama_1728	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sama_1728	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sama_1728	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Sama_1728	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Sama_1729	PWY-181	photorespiration
Sama_1730	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
Sama_1730	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
Sama_1730	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
Sama_1730	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Sama_1730	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
Sama_1730	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
Sama_1730	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
Sama_1730	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
Sama_1730	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Sama_1730	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
Sama_1733	PWY-5913	TCA cycle VI (obligate autotrophs)
Sama_1733	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Sama_1733	PWY-6638	sulfolactate degradation III
Sama_1733	PWY-6642	(<i>R</i>)-cysteate degradation
Sama_1733	PWY-6643	coenzyme M biosynthesis II
Sama_1733	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Sama_1733	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Sama_1733	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Sama_1734	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Sama_1735	PWY-7205	CMP phosphorylation
Sama_1740	PWY-5686	UMP biosynthesis
Sama_1744	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Sama_1744	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Sama_1747	PWY-5269	cardiolipin biosynthesis II
Sama_1747	PWY-5668	cardiolipin biosynthesis I
Sama_1760	PWY-5392	reductive TCA cycle II
Sama_1760	PWY-5537	pyruvate fermentation to acetate V
Sama_1760	PWY-5538	pyruvate fermentation to acetate VI
Sama_1760	PWY-5690	TCA cycle II (plants and fungi)
Sama_1760	PWY-5913	TCA cycle VI (obligate autotrophs)
Sama_1760	PWY-6728	methylaspartate cycle
Sama_1760	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Sama_1760	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Sama_1762	PWY-6167	flavin biosynthesis II (archaea)
Sama_1762	PWY-6168	flavin biosynthesis III (fungi)
Sama_1762	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Sama_1776	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Sama_1791	PWY-3781	aerobic respiration I (cytochrome c)
Sama_1791	PWY-4521	arsenite oxidation I (respiratory)
Sama_1791	PWY-6692	Fe(II) oxidation
Sama_1791	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Sama_1792	PWY-3781	aerobic respiration I (cytochrome c)
Sama_1792	PWY-4521	arsenite oxidation I (respiratory)
Sama_1792	PWY-6692	Fe(II) oxidation
Sama_1792	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Sama_1805	PWY-5913	TCA cycle VI (obligate autotrophs)
Sama_1805	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Sama_1805	PWY-6638	sulfolactate degradation III
Sama_1805	PWY-6642	(<i>R</i>)-cysteate degradation
Sama_1805	PWY-6643	coenzyme M biosynthesis II
Sama_1805	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Sama_1805	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Sama_1805	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Sama_1806	PWY-1042	glycolysis IV (plant cytosol)
Sama_1806	PWY-5484	glycolysis II (from fructose 6-phosphate)
Sama_1806	PWY-6901	superpathway of glucose and xylose degradation
Sama_1806	PWY-7003	glycerol degradation to butanol
Sama_1808	PWY-1042	glycolysis IV (plant cytosol)
Sama_1808	PWY-5484	glycolysis II (from fructose 6-phosphate)
Sama_1808	PWY-6901	superpathway of glucose and xylose degradation
Sama_1808	PWY-7003	glycerol degradation to butanol
Sama_1809	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Sama_1809	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Sama_1809	PWY-7242	D-fructuronate degradation
Sama_1809	PWY-7310	D-glucosaminate degradation
Sama_1810	PWY-5101	L-isoleucine biosynthesis II
Sama_1810	PWY-5103	L-isoleucine biosynthesis III
Sama_1810	PWY-5104	L-isoleucine biosynthesis IV
Sama_1810	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Sama_1811	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Sama_1811	PWY-6855	chitin degradation I (archaea)
Sama_1811	PWY-6906	chitin derivatives degradation
Sama_1812	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Sama_1814	PWY-1042	glycolysis IV (plant cytosol)
Sama_1814	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Sama_1814	PWY-5484	glycolysis II (from fructose 6-phosphate)
Sama_1814	PWY-5723	Rubisco shunt
Sama_1814	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Sama_1814	PWY-6886	1-butanol autotrophic biosynthesis
Sama_1814	PWY-6901	superpathway of glucose and xylose degradation
Sama_1814	PWY-7003	glycerol degradation to butanol
Sama_1814	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Sama_1814	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Sama_1825	PWY-6703	preQ<sub>0</sub> biosynthesis
Sama_1826	PWY-6703	preQ<sub>0</sub> biosynthesis
Sama_1837	PWY-5386	methylglyoxal degradation I
Sama_1855	PWY-6892	thiazole biosynthesis I (E. coli)
Sama_1855	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Sama_1856	PWY-6891	thiazole biosynthesis II (Bacillus)
Sama_1856	PWY-6892	thiazole biosynthesis I (E. coli)
Sama_1859	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Sama_1859	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Sama_1859	PWY-6897	thiamin salvage II
Sama_1859	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Sama_1859	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Sama_1859	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Sama_1859	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Sama_1860	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Sama_1884	PWY-5386	methylglyoxal degradation I
Sama_1903	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Sama_1903	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Sama_1908	PWY-2941	L-lysine biosynthesis II
Sama_1908	PWY-2942	L-lysine biosynthesis III
Sama_1908	PWY-5097	L-lysine biosynthesis VI
Sama_1914	PWY-4202	arsenate detoxification I (glutaredoxin)
Sama_1914	PWY-4621	arsenate detoxification II (glutaredoxin)
Sama_1920	PWY-6854	ethylene biosynthesis III (microbes)
Sama_1961	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Sama_1961	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Sama_1962	PWY-6834	spermidine biosynthesis III
Sama_1963	PWY-40	putrescine biosynthesis I
Sama_1963	PWY-43	putrescine biosynthesis II
Sama_1963	PWY-6305	putrescine biosynthesis IV
Sama_1963	PWY-6834	spermidine biosynthesis III
Sama_1974	PWY-6556	pyrimidine ribonucleosides salvage II
Sama_1974	PWY-7181	pyrimidine deoxyribonucleosides degradation
Sama_1974	PWY-7193	pyrimidine ribonucleosides salvage I
Sama_1974	PWY-7199	pyrimidine deoxyribonucleosides salvage
Sama_1976	PWY-4261	glycerol degradation I
Sama_1980	PWY-5367	petroselinate biosynthesis
Sama_1980	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Sama_1980	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Sama_1980	PWY-5989	stearate biosynthesis II (bacteria and plants)
Sama_1980	PWY-5994	palmitate biosynthesis I (animals and fungi)
Sama_1980	PWY-6113	superpathway of mycolate biosynthesis
Sama_1980	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Sama_1980	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Sama_1980	PWY-6951	Sama_1980|Sama_1980|YP_927855.1|GeneID:4604230
Sama_1980	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Sama_1980	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Sama_1980	PWYG-321	mycolate biosynthesis
Sama_1981	PWY-4381	fatty acid biosynthesis initiation I
Sama_1981	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Sama_1981	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Sama_1982	PWY-4381	fatty acid biosynthesis initiation I
Sama_1996	PWY-7039	phosphatidate metabolism, as a signaling molecule
Sama_2006	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Sama_2008	PWY-6936	seleno-amino acid biosynthesis
Sama_2018	PWY-5101	L-isoleucine biosynthesis II
Sama_2018	PWY-5103	L-isoleucine biosynthesis III
Sama_2018	PWY-5104	L-isoleucine biosynthesis IV
Sama_2018	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Sama_2018	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Sama_2018	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Sama_2018	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Sama_2019	PWY-5101	L-isoleucine biosynthesis II
Sama_2019	PWY-5103	L-isoleucine biosynthesis III
Sama_2019	PWY-5104	L-isoleucine biosynthesis IV
Sama_2019	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Sama_2019	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Sama_2019	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Sama_2019	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Sama_2043	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Sama_2043	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Sama_2043	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sama_2043	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Sama_2043	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Sama_2043	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Sama_2045	PWY-6543	4-aminobenzoate biosynthesis
Sama_2045	PWY-6722	candicidin biosynthesis
Sama_2046	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sama_2047	PWY-7193	pyrimidine ribonucleosides salvage I
Sama_2050	PWY-5663	tetrahydrobiopterin biosynthesis I
Sama_2050	PWY-5664	tetrahydrobiopterin biosynthesis II
Sama_2050	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Sama_2050	PWY-6703	preQ<sub>0</sub> biosynthesis
Sama_2050	PWY-6983	tetrahydrobiopterin biosynthesis III
Sama_2050	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Sama_2059	PWY-5913	TCA cycle VI (obligate autotrophs)
Sama_2059	PWY-6549	L-glutamine biosynthesis III
Sama_2059	PWY-6728	methylaspartate cycle
Sama_2059	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Sama_2059	PWY-7124	ethylene biosynthesis V (engineered)
Sama_2059	PWY-7254	TCA cycle VII (acetate-producers)
Sama_2059	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Sama_2064	PWY-6123	inosine-5'-phosphate biosynthesis I
Sama_2064	PWY-6124	inosine-5'-phosphate biosynthesis II
Sama_2064	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Sama_2064	PWY-7234	inosine-5'-phosphate biosynthesis III
Sama_2071	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Sama_2071	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Sama_2072	PWY-5484	glycolysis II (from fructose 6-phosphate)
Sama_2074	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Sama_2074	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Sama_2074	PWY-6164	3-dehydroquinate biosynthesis I
Sama_2079	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Sama_2079	PWY-7118	chitin degradation to ethanol
Sama_2096	PWY-7183	pyrimidine nucleobases salvage I
Sama_2097	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Sama_2097	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Sama_2097	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Sama_2098	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Sama_2098	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Sama_2115	PWY-2723	trehalose degradation V
Sama_2115	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Sama_2115	PWY-5661	GDP-glucose biosynthesis
Sama_2115	PWY-5940	streptomycin biosynthesis
Sama_2115	PWY-621	sucrose degradation III (sucrose invertase)
Sama_2115	PWY-622	starch biosynthesis
Sama_2115	PWY-6731	starch degradation III
Sama_2115	PWY-6737	starch degradation V
Sama_2115	PWY-6981	chitin biosynthesis
Sama_2115	PWY-7238	sucrose biosynthesis II
Sama_2115	PWY-7343	UDP-glucose biosynthesis
Sama_2129	PWY-5958	acridone alkaloid biosynthesis
Sama_2129	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Sama_2129	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Sama_2130	PWY-5958	acridone alkaloid biosynthesis
Sama_2130	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Sama_2130	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Sama_2146	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Sama_2146	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Sama_2146	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Sama_2146	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Sama_2149	PWY-2161	folate polyglutamylation
Sama_2152	PWY-2941	L-lysine biosynthesis II
Sama_2152	PWY-2942	L-lysine biosynthesis III
Sama_2152	PWY-5097	L-lysine biosynthesis VI
Sama_2152	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Sama_2152	PWY-6559	spermidine biosynthesis II
Sama_2152	PWY-6562	norspermidine biosynthesis
Sama_2152	PWY-7153	grixazone biosynthesis
Sama_2152	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Sama_2157	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Sama_2157	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Sama_2157	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Sama_2159	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Sama_2167	PWY-1361	benzoyl-CoA degradation I (aerobic)
Sama_2167	PWY-5109	2-methylbutanoate biosynthesis
Sama_2167	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Sama_2167	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Sama_2167	PWY-5177	glutaryl-CoA degradation
Sama_2167	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Sama_2167	PWY-6435	4-hydroxybenzoate biosynthesis V
Sama_2167	PWY-6583	pyruvate fermentation to butanol I
Sama_2167	PWY-6863	pyruvate fermentation to hexanol
Sama_2167	PWY-6883	pyruvate fermentation to butanol II
Sama_2167	PWY-6944	androstenedione degradation
Sama_2167	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Sama_2167	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Sama_2167	PWY-7007	methyl ketone biosynthesis
Sama_2167	PWY-7046	4-coumarate degradation (anaerobic)
Sama_2167	PWY-7094	fatty acid salvage
Sama_2167	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Sama_2167	PWY-735	jasmonic acid biosynthesis
Sama_2167	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Sama_2168	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Sama_2168	PWY-6435	4-hydroxybenzoate biosynthesis V
Sama_2168	PWY-6863	pyruvate fermentation to hexanol
Sama_2168	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Sama_2168	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Sama_2168	PWY-6948	sitosterol degradation to androstenedione
Sama_2168	PWY-7094	fatty acid salvage
Sama_2168	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
Sama_2168	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
Sama_2168	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
Sama_2168	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
Sama_2168	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
Sama_2168	PWY-735	jasmonic acid biosynthesis
Sama_2187	PWY-5194	siroheme biosynthesis
Sama_2187	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Sama_2193	PWY-6700	queuosine biosynthesis
Sama_2194	PWY-6700	queuosine biosynthesis
Sama_2195	PWY-6012	acyl carrier protein metabolism I
Sama_2207	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Sama_2221	PWY-7158	L-phenylalanine degradation V
Sama_2222	PWY-6134	L-tyrosine biosynthesis IV
Sama_2222	PWY-7158	L-phenylalanine degradation V
Sama_2223	PWY-3801	sucrose degradation II (sucrose synthase)
Sama_2223	PWY-6527	stachyose degradation
Sama_2223	PWY-6981	chitin biosynthesis
Sama_2223	PWY-7238	sucrose biosynthesis II
Sama_2223	PWY-7343	UDP-glucose biosynthesis
Sama_2224	PWY-3821	galactose degradation III
Sama_2224	PWY-6317	galactose degradation I (Leloir pathway)
Sama_2224	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Sama_2224	PWY-6527	stachyose degradation
Sama_2224	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Sama_2224	PWY-7344	UDP-D-galactose biosynthesis
Sama_2236	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Sama_2240	PWY-3221	dTDP-L-rhamnose biosynthesis II
Sama_2240	PWY-6808	dTDP-D-forosamine biosynthesis
Sama_2240	PWY-6942	dTDP-D-desosamine biosynthesis
Sama_2240	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Sama_2240	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Sama_2240	PWY-6974	dTDP-L-olivose biosynthesis
Sama_2240	PWY-6976	dTDP-L-mycarose biosynthesis
Sama_2240	PWY-7104	dTDP-L-megosamine biosynthesis
Sama_2240	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Sama_2240	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Sama_2240	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Sama_2240	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Sama_2240	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Sama_2240	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Sama_2240	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Sama_2240	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Sama_2242	PWY-3221	dTDP-L-rhamnose biosynthesis II
Sama_2242	PWY-6808	dTDP-D-forosamine biosynthesis
Sama_2242	PWY-6942	dTDP-D-desosamine biosynthesis
Sama_2242	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Sama_2242	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Sama_2242	PWY-6974	dTDP-L-olivose biosynthesis
Sama_2242	PWY-6976	dTDP-L-mycarose biosynthesis
Sama_2242	PWY-7104	dTDP-L-megosamine biosynthesis
Sama_2242	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Sama_2242	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Sama_2242	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Sama_2242	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Sama_2242	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Sama_2242	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Sama_2242	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Sama_2242	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Sama_2243	PWY-6749	CMP-legionaminate biosynthesis I
Sama_2261	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Sama_2294	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Sama_2331	PWY-6749	CMP-legionaminate biosynthesis I
Sama_2331	PWY-7131	CMP-legionaminate biosynthesis II
Sama_2336	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Sama_2336	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Sama_2347	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
Sama_2350	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Sama_2350	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Sama_2350	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Sama_2358	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Sama_2359	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Sama_2359	PWY-6596	adenosine nucleotides degradation I
Sama_2359	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Sama_2365	PWY-7560	methylerythritol phosphate pathway II
Sama_2380	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Sama_2381	PWY-6728	methylaspartate cycle
Sama_2381	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Sama_2381	PWY-7118	chitin degradation to ethanol
Sama_2381	PWY-7294	xylose degradation IV
Sama_2381	PWY-7295	L-arabinose degradation IV
Sama_2394	PWY-7052	cyanophycin metabolism
Sama_2436	PWY-6891	thiazole biosynthesis II (Bacillus)
Sama_2436	PWY-6892	thiazole biosynthesis I (E. coli)
Sama_2436	PWY-7560	methylerythritol phosphate pathway II
Sama_2438	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Sama_2438	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Sama_2438	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Sama_2440	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Sama_2440	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Sama_2449	PWY-622	starch biosynthesis
Sama_2450	PWY-622	starch biosynthesis
Sama_2451	PWY-5941	glycogen degradation II (eukaryotic)
Sama_2451	PWY-622	starch biosynthesis
Sama_2451	PWY-6731	starch degradation III
Sama_2451	PWY-6737	starch degradation V
Sama_2451	PWY-7238	sucrose biosynthesis II
Sama_2453	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Sama_2453	PWY-622	starch biosynthesis
Sama_2454	PWY-5941	glycogen degradation II (eukaryotic)
Sama_2454	PWY-6724	starch degradation II
Sama_2454	PWY-6737	starch degradation V
Sama_2454	PWY-7238	sucrose biosynthesis II
Sama_2477	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Sama_2478	PWY-3341	L-proline biosynthesis III
Sama_2478	PWY-4981	L-proline biosynthesis II (from arginine)
Sama_2478	PWY-6344	L-ornithine degradation II (Stickland reaction)
Sama_2482	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Sama_2503	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Sama_2503	PWY-5686	UMP biosynthesis
Sama_2503	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Sama_2504	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Sama_2504	PWY-5686	UMP biosynthesis
Sama_2504	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Sama_2505	PWY-2941	L-lysine biosynthesis II
Sama_2505	PWY-2942	L-lysine biosynthesis III
Sama_2505	PWY-5097	L-lysine biosynthesis VI
Sama_2518	PWY-5988	wound-induced proteolysis I
Sama_2518	PWY-6018	seed germination protein turnover
Sama_2521	PWY-43	putrescine biosynthesis II
Sama_2522	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Sama_2541	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Sama_2541	PWY-6153	autoinducer AI-2 biosynthesis I
Sama_2541	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
Sama_2559	PWY-6654	phosphopantothenate biosynthesis III
Sama_2561	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Sama_2561	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Sama_2567	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Sama_2569	PWY-7560	methylerythritol phosphate pathway II
Sama_2585	PWY-5381	pyridine nucleotide cycling (plants)
Sama_2585	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Sama_2592	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Sama_2592	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Sama_2594	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Sama_2594	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Sama_2595	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Sama_2595	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Sama_2595	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Sama_2600	PWY-5669	phosphatidylethanolamine biosynthesis I
Sama_2627	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Sama_2627	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Sama_2627	PWY-6936	seleno-amino acid biosynthesis
Sama_2627	PWY-702	L-methionine biosynthesis II
Sama_2644	PWY-381	nitrate reduction II (assimilatory)
Sama_2644	PWY-5675	nitrate reduction V (assimilatory)
Sama_2644	PWY-6549	L-glutamine biosynthesis III
Sama_2644	PWY-6963	ammonia assimilation cycle I
Sama_2644	PWY-6964	ammonia assimilation cycle II
Sama_2650	PWY-5642	2,4-dinitrotoluene degradation
Sama_2650	PWY-6373	acrylate degradation
Sama_2651	PWY-5692	allantoin degradation to glyoxylate II
Sama_2651	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
Sama_2676	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Sama_2676	PWY-6853	ethylene biosynthesis II (microbes)
Sama_2676	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Sama_2681	PWY-6523	nitrite-dependent anaerobic methane oxidation
Sama_2681	PWY-6748	nitrate reduction VII (denitrification)
Sama_2681	PWY-7084	nitrifier denitrification
Sama_2734	PWY-723	alkylnitronates degradation
Sama_2736	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Sama_2736	PWY-5723	Rubisco shunt
Sama_2756	PWY-1042	glycolysis IV (plant cytosol)
Sama_2756	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Sama_2756	PWY-5484	glycolysis II (from fructose 6-phosphate)
Sama_2756	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Sama_2756	PWY-7385	1,3-propanediol biosynthesis (engineered)
Sama_2757	PWY-1042	glycolysis IV (plant cytosol)
Sama_2757	PWY-5484	glycolysis II (from fructose 6-phosphate)
Sama_2757	PWY-6886	1-butanol autotrophic biosynthesis
Sama_2757	PWY-6901	superpathway of glucose and xylose degradation
Sama_2757	PWY-7003	glycerol degradation to butanol
Sama_2759	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Sama_2759	PWY-5723	Rubisco shunt
Sama_2759	PWY-6891	thiazole biosynthesis II (Bacillus)
Sama_2759	PWY-6892	thiazole biosynthesis I (E. coli)
Sama_2759	PWY-6901	superpathway of glucose and xylose degradation
Sama_2759	PWY-7560	methylerythritol phosphate pathway II
Sama_2760	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Sama_2760	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Sama_2762	PWY-7310	D-glucosaminate degradation
Sama_2777	PWY-6823	molybdenum cofactor biosynthesis
Sama_2777	PWY-6891	thiazole biosynthesis II (Bacillus)
Sama_2777	PWY-6892	thiazole biosynthesis I (E. coli)
Sama_2777	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Sama_2779	PWY-7533	gliotoxin biosynthesis
Sama_2824	PWY-3841	folate transformations II
Sama_2824	PWY-6614	tetrahydrofolate biosynthesis
Sama_2838	PWY-6683	sulfate reduction III (assimilatory)
Sama_2839	PWY-6683	sulfate reduction III (assimilatory)
Sama_2870	PWY-5686	UMP biosynthesis
Sama_2886	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Sama_2886	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Sama_2888	PWY-5340	sulfate activation for sulfonation
Sama_2890	PWY-5278	sulfite oxidation III
Sama_2890	PWY-5340	sulfate activation for sulfonation
Sama_2890	PWY-6683	sulfate reduction III (assimilatory)
Sama_2890	PWY-6932	selenate reduction
Sama_2891	PWY-5278	sulfite oxidation III
Sama_2891	PWY-5340	sulfate activation for sulfonation
Sama_2891	PWY-6683	sulfate reduction III (assimilatory)
Sama_2891	PWY-6932	selenate reduction
Sama_2892	PWY-5194	siroheme biosynthesis
Sama_2892	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Sama_2893	PWY-6803	phosphatidylcholine acyl editing
Sama_2893	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
Sama_2893	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
Sama_2893	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
Sama_2917	PWY-4061	glutathione-mediated detoxification I
Sama_2917	PWY-6842	glutathione-mediated detoxification II
Sama_2917	PWY-7112	4-hydroxy-2-nonenal detoxification
Sama_2941	PWY-5506	methanol oxidation to formaldehyde IV
Sama_2971	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Sama_2971	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Sama_2971	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Sama_2971	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Sama_2990	PWY-5674	nitrate reduction IV (dissimilatory)
Sama_3002	PWY-5723	Rubisco shunt
Sama_3015	PWY-5958	acridone alkaloid biosynthesis
Sama_3015	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Sama_3015	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Sama_3021	PWY-3781	aerobic respiration I (cytochrome c)
Sama_3021	PWY-6692	Fe(II) oxidation
Sama_3021	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
Sama_3021	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Sama_3026	PWY-2781	<i>cis</i>-zeatin biosynthesis
Sama_3030	PWY-6938	NADH repair
Sama_3034	PWY-5669	phosphatidylethanolamine biosynthesis I
Sama_3057	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Sama_3069	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Sama_3075	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Sama_3075	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Sama_3084	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Sama_3084	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Sama_3139	PWY-5667	CDP-diacylglycerol biosynthesis I
Sama_3139	PWY-5981	CDP-diacylglycerol biosynthesis III
Sama_3139	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
Sama_3139	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
Sama_3146	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Sama_3146	PWY-2161	folate polyglutamylation
Sama_3146	PWY-2201	folate transformations I
Sama_3146	PWY-3841	folate transformations II
Sama_3169	PWY-2201	folate transformations I
Sama_3169	PWY-3841	folate transformations II
Sama_3170	PWY-2941	L-lysine biosynthesis II
Sama_3170	PWY-2942	L-lysine biosynthesis III
Sama_3170	PWY-5097	L-lysine biosynthesis VI
Sama_3170	PWY-6559	spermidine biosynthesis II
Sama_3170	PWY-6562	norspermidine biosynthesis
Sama_3170	PWY-7153	grixazone biosynthesis
Sama_3180	PWY-5674	nitrate reduction IV (dissimilatory)
Sama_3194	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Sama_3194	PWY-6416	quinate degradation II
Sama_3194	PWY-6707	gallate biosynthesis
Sama_3202	PWY-5839	menaquinol-7 biosynthesis
Sama_3202	PWY-5844	menaquinol-9 biosynthesis
Sama_3202	PWY-5849	menaquinol-6 biosynthesis
Sama_3202	PWY-5890	menaquinol-10 biosynthesis
Sama_3202	PWY-5891	menaquinol-11 biosynthesis
Sama_3202	PWY-5892	menaquinol-12 biosynthesis
Sama_3202	PWY-5895	menaquinol-13 biosynthesis
Sama_3211	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Sama_3211	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Sama_3217	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Sama_3219	PWY-3781	aerobic respiration I (cytochrome c)
Sama_3219	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Sama_3219	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Sama_3219	PWY-5690	TCA cycle II (plants and fungi)
Sama_3219	PWY-6728	methylaspartate cycle
Sama_3219	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Sama_3219	PWY-7254	TCA cycle VII (acetate-producers)
Sama_3219	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Sama_3220	PWY-3781	aerobic respiration I (cytochrome c)
Sama_3220	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Sama_3220	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Sama_3220	PWY-5690	TCA cycle II (plants and fungi)
Sama_3220	PWY-6728	methylaspartate cycle
Sama_3220	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Sama_3220	PWY-7254	TCA cycle VII (acetate-producers)
Sama_3220	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Sama_3249	PWY-2941	L-lysine biosynthesis II
Sama_3249	PWY-5097	L-lysine biosynthesis VI
Sama_3250	PWY-2941	L-lysine biosynthesis II
Sama_3250	PWY-2942	L-lysine biosynthesis III
Sama_3250	PWY-5097	L-lysine biosynthesis VI
Sama_3254	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Sama_3254	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Sama_3255	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Sama_3255	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Sama_3277	PWY-6832	2-aminoethylphosphonate degradation II
Sama_3279	PWY-5101	L-isoleucine biosynthesis II
Sama_3279	PWY-5103	L-isoleucine biosynthesis III
Sama_3279	PWY-5104	L-isoleucine biosynthesis IV
Sama_3279	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Sama_3281	PWY-5101	L-isoleucine biosynthesis II
Sama_3281	PWY-5103	L-isoleucine biosynthesis III
Sama_3281	PWY-5104	L-isoleucine biosynthesis IV
Sama_3281	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Sama_3281	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Sama_3281	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Sama_3281	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Sama_3282	PWY-5101	L-isoleucine biosynthesis II
Sama_3282	PWY-5103	L-isoleucine biosynthesis III
Sama_3282	PWY-5104	L-isoleucine biosynthesis IV
Sama_3282	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Sama_3294	PWY-5747	2-methylcitrate cycle II
Sama_3299	PWY-5057	L-valine degradation II
Sama_3299	PWY-5076	L-leucine degradation III
Sama_3299	PWY-5078	L-isoleucine degradation II
Sama_3299	PWY-5101	L-isoleucine biosynthesis II
Sama_3299	PWY-5103	L-isoleucine biosynthesis III
Sama_3299	PWY-5104	L-isoleucine biosynthesis IV
Sama_3299	PWY-5108	L-isoleucine biosynthesis V
Sama_3334	PWY-46	putrescine biosynthesis III
Sama_3334	PWY-6305	putrescine biosynthesis IV
Sama_3338	PWY-6825	phosphatidylcholine biosynthesis V
Sama_3356	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
Sama_3361	PWY-181	photorespiration
Sama_3362	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Sama_3362	PWY-5723	Rubisco shunt
Sama_3367	PWY-6164	3-dehydroquinate biosynthesis I
Sama_3368	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Sama_3383	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Sama_3383	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Sama_3383	PWY-5989	stearate biosynthesis II (bacteria and plants)
Sama_3383	PWY-5994	palmitate biosynthesis I (animals and fungi)
Sama_3383	PWY-6113	superpathway of mycolate biosynthesis
Sama_3383	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Sama_3383	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Sama_3383	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Sama_3383	PWYG-321	mycolate biosynthesis
Sama_3393	PWY-5367	petroselinate biosynthesis
Sama_3393	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Sama_3393	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Sama_3393	PWY-5989	stearate biosynthesis II (bacteria and plants)
Sama_3393	PWY-5994	palmitate biosynthesis I (animals and fungi)
Sama_3393	PWY-6113	superpathway of mycolate biosynthesis
Sama_3393	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Sama_3393	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Sama_3393	PWY-6951	Sama_3393|fabG|YP_929265.1|GeneID:4605640
Sama_3393	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Sama_3393	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Sama_3393	PWYG-321	mycolate biosynthesis
Sama_3416	PWY-381	nitrate reduction II (assimilatory)
Sama_3416	PWY-5675	nitrate reduction V (assimilatory)
Sama_3416	PWY-6549	L-glutamine biosynthesis III
Sama_3416	PWY-6963	ammonia assimilation cycle I
Sama_3416	PWY-6964	ammonia assimilation cycle II
Sama_3456	PWY-5839	menaquinol-7 biosynthesis
Sama_3456	PWY-5844	menaquinol-9 biosynthesis
Sama_3456	PWY-5849	menaquinol-6 biosynthesis
Sama_3456	PWY-5890	menaquinol-10 biosynthesis
Sama_3456	PWY-5891	menaquinol-11 biosynthesis
Sama_3456	PWY-5892	menaquinol-12 biosynthesis
Sama_3456	PWY-5895	menaquinol-13 biosynthesis
Sama_3460	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Sama_3460	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Sama_3462	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Sama_3462	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Sama_3463	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Sama_3463	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Sama_3480	PWY-5667	CDP-diacylglycerol biosynthesis I
Sama_3480	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
Sama_3484	PWY-3781	aerobic respiration I (cytochrome c)
Sama_3484	PWY-4521	arsenite oxidation I (respiratory)
Sama_3484	PWY-6692	Fe(II) oxidation
Sama_3484	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Sama_3505	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Sama_3524	PWY-6823	molybdenum cofactor biosynthesis
Sama_3528	PWY-6823	molybdenum cofactor biosynthesis
Sama_3543	PWY-4081	glutathione redox reactions I
Sama_3597	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Sama_3623	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
Sama_3623	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Sama_3623	PWY-6148	tetrahydromethanopterin biosynthesis
Sama_3635	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Sama_3635	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Sama_3639	PWY-6749	CMP-legionaminate biosynthesis I
Sama_3642	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Sama_3644	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Sama_3646	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
