Shal_0001	SSF48295	TrpR-like
Shal_0001	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0002	SSF55979	DNA clamp
Shal_0003	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0004	SSF54211	Ribosomal protein S5 domain 2-like
Shal_0004	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_0004	SSF56719	Type II DNA topoisomerase
Shal_0005	SSF109604	HD-domain/PDEase-like
Shal_0006	SSF109604	HD-domain/PDEase-like
Shal_0007	SSF55681	Class II aaRS and biotin synthetases
Shal_0008	SSF48150	DNA-glycosylase
Shal_0010	SSF51338	Composite domain of metallo-dependent hydrolases
Shal_0010	SSF51556	Metallo-dependent hydrolases
Shal_0010	SSF82171	DPP6 N-terminal domain-like
Shal_0012	SSF64307	SirA-like
Shal_0013	SSF55826	YbaK/ProRS associated domain
Shal_0014	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_0015	SSF53901	Thiolase-like
Shal_0016	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Shal_0016	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_0016	SSF52096	ClpP/crotonase
Shal_0017	SSF55920	Creatinase/aminopeptidase
Shal_0018	SSF54211	Ribosomal protein S5 domain 2-like
Shal_0018	SSF54980	EF-G C-terminal domain-like
Shal_0020	SSF52218	Flavoproteins
Shal_0021	SSF46785	"Winged helix" DNA-binding domain
Shal_0022	SSF52218	Flavoproteins
Shal_0024	SSF116726	TrkA C-terminal domain-like
Shal_0024	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_0025	SSF48013	NusB-like
Shal_0025	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_0026	SSF50486	FMT C-terminal domain-like
Shal_0026	SSF53328	Formyltransferase
Shal_0027	SSF56420	Peptide deformylase
Shal_0028	SSF54106	LysM domain
Shal_0029	SSF102405	MCP/YpsA-like
Shal_0032	SSF57783	Zinc beta-ribbon
Shal_0033	SSF55821	YrdC/RibB
Shal_0034	SSF102886	Coproporphyrinogen III oxidase
Shal_0035	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_0035	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Shal_0036	SSF160272	Shew3726-like
Shal_0037	SSF51161	Trimeric LpxA-like enzymes
Shal_0039	SSF46785	"Winged helix" DNA-binding domain
Shal_0040	SSF88713	Glycoside hydrolase/deacetylase
Shal_0041	SSF50156	PDZ domain-like
Shal_0041	SSF52096	ClpP/crotonase
Shal_0042	SSF51261	Duplicated hybrid motif
Shal_0043	SSF53649	Alkaline phosphatase-like
Shal_0043	SSF64158	2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
Shal_0044	SSF52821	Rhodanese/Cell cycle control phosphatase
Shal_0045	SSF54611	SecB-like
Shal_0046	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Shal_0046	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_0047	SSF160996	HI0933 insert domain-like
Shal_0047	SSF51905	FAD/NAD(P)-binding domain
Shal_0049	SSF111369	HlyD-like secretion proteins
Shal_0050	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0052	SSF54001	Cysteine proteinases
Shal_0053	SSF56935	Porins
Shal_0055	SSF53218	Molybdenum cofactor biosynthesis proteins
Shal_0059	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shal_0061	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0062	SSF53474	alpha/beta-Hydrolases
Shal_0063	SSF56801	Acetyl-CoA synthetase-like
Shal_0064	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_0065	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_0066	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_0067	SSF56784	HAD-like
Shal_0068	SSF53955	Lysozyme-like
Shal_0069	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0071	SSF51338	Composite domain of metallo-dependent hydrolases
Shal_0071	SSF51556	Metallo-dependent hydrolases
Shal_0072	SSF46785	"Winged helix" DNA-binding domain
Shal_0072	SSF64288	Chorismate lyase-like
Shal_0073	SSF111326	Urocanase
Shal_0074	SSF48557	L-aspartase-like
Shal_0075	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_0076	SSF46785	"Winged helix" DNA-binding domain
Shal_0076	SSF53850	Periplasmic binding protein-like II
Shal_0077	SSF55298	YjgF-like
Shal_0079	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Shal_0082	SSF51182	RmlC-like cupins
Shal_0083	SSF56796	Dehydroquinate synthase-like
Shal_0084	SSF56935	Porins
Shal_0085	SSF50182	Sm-like ribonucleoproteins
Shal_0087	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Shal_0088	SSF54427	NTF2-like
Shal_0092	SSF48208	Six-hairpin glycosidases
Shal_0094	SSF49299	PKD domain
Shal_0094	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shal_0095	SSF64288	Chorismate lyase-like
Shal_0097	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_0098	SSF53850	Periplasmic binding protein-like II
Shal_0099	SSF53927	Cytidine deaminase-like
Shal_0102	SSF54862	4Fe-4S ferredoxins
Shal_0103	SSF89155	TorD-like
Shal_0105	SSF50692	ADC-like
Shal_0105	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shal_0106	SSF54862	4Fe-4S ferredoxins
Shal_0107	SSF81342	Transmembrane di-heme cytochromes
Shal_0109	SSF50692	ADC-like
Shal_0109	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shal_0110	SSF54862	4Fe-4S ferredoxins
Shal_0111	SSF81342	Transmembrane di-heme cytochromes
Shal_0113	SSF50692	ADC-like
Shal_0113	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shal_0114	SSF54862	4Fe-4S ferredoxins
Shal_0115	SSF81342	Transmembrane di-heme cytochromes
Shal_0116	SSF102114	Radical SAM enzymes
Shal_0117	SSF53613	Ribokinase-like
Shal_0118	SSF55073	Nucleotide cyclase
Shal_0119	SSF50800	PK beta-barrel domain-like
Shal_0121	SSF51905	FAD/NAD(P)-binding domain
Shal_0121	SSF54373	FAD-linked reductases, C-terminal domain
Shal_0121	SSF54862	4Fe-4S ferredoxins
Shal_0122	SSF102114	Radical SAM enzymes
Shal_0123	SSF53218	Molybdenum cofactor biosynthesis proteins
Shal_0124	SSF55040	Molybdenum cofactor biosynthesis protein C, MoaC
Shal_0125	SSF54285	MoaD/ThiS
Shal_0126	SSF54690	Molybdopterin synthase subunit MoaE
Shal_0127	SSF53850	Periplasmic binding protein-like II
Shal_0128	SSF161098	MetI-like
Shal_0129	SSF50331	MOP-like
Shal_0129	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0130	SSF101756	Hypothetical protein YgiW
Shal_0132	SSF52172	CheY-like
Shal_0133	SSF158472	HAMP domain-like
Shal_0133	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_0133	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_0134	SSF55120	Pseudouridine synthase
Shal_0135	SSF52374	Nucleotidylyl transferase
Shal_0137	SSF53448	Nucleotide-diphospho-sugar transferases
Shal_0140	SSF46946	S13-like H2TH domain
Shal_0140	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Shal_0140	SSF81624	N-terminal domain of MutM-like DNA repair proteins
Shal_0142	SSF49373	Invasin/intimin cell-adhesion fragments
Shal_0144	SSF102114	Radical SAM enzymes
Shal_0145	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0145	SSF53218	Molybdenum cofactor biosynthesis proteins
Shal_0145	SSF63867	MoeA C-terminal domain-like
Shal_0145	SSF63882	MoeA N-terminal region -like
Shal_0146	SSF53448	Nucleotide-diphospho-sugar transferases
Shal_0147	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0148	SSF161098	MetI-like
Shal_0149	SSF53850	Periplasmic binding protein-like II
Shal_0150	SSF46689	Homeodomain-like
Shal_0150	SSF52172	CheY-like
Shal_0150	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0151	SSF103190	Sensory domain-like
Shal_0151	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_0151	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_0152	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_0154	SSF49313	Cadherin-like
Shal_0155	SSF56322	ADC synthase
Shal_0156	SSF56935	Porins
Shal_0157	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0162	SSF109604	HD-domain/PDEase-like
Shal_0163	SSF52317	Class I glutamine amidotransferase-like
Shal_0165	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Shal_0166	SSF55298	YjgF-like
Shal_0168	SSF53092	Creatinase/prolidase N-terminal domain
Shal_0168	SSF55920	Creatinase/aminopeptidase
Shal_0170	SSF103481	Multidrug resistance efflux transporter EmrE
Shal_0171	SSF53187	Zn-dependent exopeptidases
Shal_0171	SSF55031	Bacterial exopeptidase dimerisation domain
Shal_0173	SSF103473	MFS general substrate transporter
Shal_0174	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_0174	SSF52172	CheY-like
Shal_0175	SSF158472	HAMP domain-like
Shal_0175	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_0176	SSF103473	MFS general substrate transporter
Shal_0177	SSF50692	ADC-like
Shal_0177	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shal_0178	SSF54862	4Fe-4S ferredoxins
Shal_0179	SSF89155	TorD-like
Shal_0180	SSF103501	Respiratory nitrate reductase 1 gamma chain
Shal_0181	SSF109998	Triger factor/SurA peptide-binding domain-like
Shal_0181	SSF54534	FKBP-like
Shal_0184	SSF56112	Protein kinase-like (PK-like)
Shal_0184	SSF81606	PP2C-like
Shal_0185	SSF103473	MFS general substrate transporter
Shal_0186	SSF103481	Multidrug resistance efflux transporter EmrE
Shal_0188	SSF51395	FMN-linked oxidoreductases
Shal_0190	SSF51905	FAD/NAD(P)-binding domain
Shal_0190	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Shal_0193	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shal_0194	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_0195	SSF47616	GST C-terminal domain-like
Shal_0195	SSF52833	Thioredoxin-like
Shal_0196	SSF48150	DNA-glycosylase
Shal_0197	SSF111369	HlyD-like secretion proteins
Shal_0198	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shal_0198	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shal_0198	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_0199	SSF56300	Metallo-dependent phosphatases
Shal_0203	SSF140478	LemA-like
Shal_0205	SSF53955	Lysozyme-like
Shal_0207	SSF46785	"Winged helix" DNA-binding domain
Shal_0207	SSF53850	Periplasmic binding protein-like II
Shal_0209	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_0210	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_0211	SSF48695	Multiheme cytochromes
Shal_0212	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_0213	SSF158791	MgtE N-terminal domain-like
Shal_0213	SSF161093	MgtE membrane domain-like
Shal_0213	SSF54631	CBS-domain pair
Shal_0215	SSF103473	MFS general substrate transporter
Shal_0216	SSF54862	4Fe-4S ferredoxins
Shal_0217	SSF51905	FAD/NAD(P)-binding domain
Shal_0217	SSF54373	FAD-linked reductases, C-terminal domain
Shal_0218	SSF52402	Adenine nucleotide alpha hydrolases-like
Shal_0218	SSF52467	DHS-like NAD/FAD-binding domain
Shal_0219	SSF52402	Adenine nucleotide alpha hydrolases-like
Shal_0221	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Shal_0221	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Shal_0222	SSF89796	CoA-transferase family III (CaiB/BaiF)
Shal_0223	SSF56801	Acetyl-CoA synthetase-like
Shal_0224	SSF52096	ClpP/crotonase
Shal_0225	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_0226	SSF51161	Trimeric LpxA-like enzymes
Shal_0227	SSF53474	alpha/beta-Hydrolases
Shal_0228	SSF46785	"Winged helix" DNA-binding domain
Shal_0228	SSF53850	Periplasmic binding protein-like II
Shal_0229	SSF158442	DsbB-like
Shal_0230	SSF52833	Thioredoxin-like
Shal_0232	SSF111364	Tsx-like channel
Shal_0233	SSF46689	Homeodomain-like
Shal_0234	SSF158442	DsbB-like
Shal_0235	SSF52833	Thioredoxin-like
Shal_0237	SSF56925	OMPA-like
Shal_0238	SSF46785	"Winged helix" DNA-binding domain
Shal_0238	SSF53850	Periplasmic binding protein-like II
Shal_0239	SSF158472	HAMP domain-like
Shal_0239	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_0239	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_0240	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_0240	SSF52172	CheY-like
Shal_0241	SSF46557	GreA transcript cleavage protein, N-terminal domain
Shal_0241	SSF54534	FKBP-like
Shal_0242	SSF158832	Tex N-terminal region-like
Shal_0242	SSF47781	RuvA domain 2-like
Shal_0242	SSF50249	Nucleic acid-binding proteins
Shal_0242	SSF53098	Ribonuclease H-like
Shal_0244	SSF53474	alpha/beta-Hydrolases
Shal_0245	SSF53271	PRTase-like
Shal_0246	SSF52317	Class I glutamine amidotransferase-like
Shal_0246	SSF53187	Zn-dependent exopeptidases
Shal_0247	SSF117916	Fe-S cluster assembly (FSCA) domain-like
Shal_0247	SSF89360	HesB-like domain
Shal_0249	SSF88713	Glycoside hydrolase/deacetylase
Shal_0250	SSF52833	Thioredoxin-like
Shal_0255	SSF81452	Cytochrome c oxidase subunit III-like
Shal_0256	SSF110111	Ctag/Cox11
Shal_0257	SSF81442	Cytochrome c oxidase subunit I-like
Shal_0258	SSF46626	Cytochrome c
Shal_0258	SSF49503	Cupredoxins
Shal_0258	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
Shal_0259	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0260	SSF46785	"Winged helix" DNA-binding domain
Shal_0260	SSF51306	LexA/Signal peptidase
Shal_0261	SSF53067	Actin-like ATPase domain
Shal_0264	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0265	SSF53822	Periplasmic binding protein-like I
Shal_0266	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
Shal_0269	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0271	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Shal_0273	SSF46689	Homeodomain-like
Shal_0275	SSF111369	HlyD-like secretion proteins
Shal_0276	SSF55073	Nucleotide cyclase
Shal_0277	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Shal_0278	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shal_0278	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shal_0278	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_0279	SSF111369	HlyD-like secretion proteins
Shal_0284	SSF48695	Multiheme cytochromes
Shal_0286	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_0287	SSF47364	Domain of the SRP/SRP receptor G-proteins
Shal_0287	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0288	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0290	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Shal_0290	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Shal_0291	SSF54427	NTF2-like
Shal_0292	SSF49785	Galactose-binding domain-like
Shal_0292	SSF52743	Subtilisin-like
Shal_0294	SSF56801	Acetyl-CoA synthetase-like
Shal_0295	SSF51604	Enolase C-terminal domain-like
Shal_0295	SSF54826	Enolase N-terminal domain-like
Shal_0296	SSF53474	alpha/beta-Hydrolases
Shal_0297	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Shal_0298	SSF46785	"Winged helix" DNA-binding domain
Shal_0298	SSF53850	Periplasmic binding protein-like II
Shal_0299	SSF46785	"Winged helix" DNA-binding domain
Shal_0299	SSF53850	Periplasmic binding protein-like II
Shal_0301	SSF48695	Multiheme cytochromes
Shal_0302	SSF54862	4Fe-4S ferredoxins
Shal_0304	SSF48695	Multiheme cytochromes
Shal_0305	SSF158682	TerB-like
Shal_0308	SSF81901	HCP-like
Shal_0311	SSF46785	"Winged helix" DNA-binding domain
Shal_0311	SSF53850	Periplasmic binding protein-like II
Shal_0312	SSF103473	MFS general substrate transporter
Shal_0314	SSF141868	EAL domain-like
Shal_0314	SSF55073	Nucleotide cyclase
Shal_0314	SSF55785	PYP-like sensor domain (PAS domain)
Shal_0316	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_0318	SSF141371	PilZ domain-like
Shal_0319	SSF63411	LuxS/MPP-like metallohydrolase
Shal_0320	SSF63411	LuxS/MPP-like metallohydrolase
Shal_0321	SSF75217	alpha/beta knot
Shal_0322	SSF46785	"Winged helix" DNA-binding domain
Shal_0322	SSF53850	Periplasmic binding protein-like II
Shal_0326	SSF102114	Radical SAM enzymes
Shal_0326	SSF54862	4Fe-4S ferredoxins
Shal_0327	SSF51998	PFL-like glycyl radical enzymes
Shal_0328	SSF53720	ALDH-like
Shal_0329	SSF50129	GroES-like
Shal_0329	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_0330	SSF46785	"Winged helix" DNA-binding domain
Shal_0330	SSF53850	Periplasmic binding protein-like II
Shal_0331	SSF51905	FAD/NAD(P)-binding domain
Shal_0331	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Shal_0332	SSF48695	Multiheme cytochromes
Shal_0335	SSF46785	"Winged helix" DNA-binding domain
Shal_0335	SSF53850	Periplasmic binding protein-like II
Shal_0336	SSF46689	Homeodomain-like
Shal_0337	SSF158472	HAMP domain-like
Shal_0337	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_0337	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_0338	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_0338	SSF52172	CheY-like
Shal_0340	SSF160240	Cation efflux protein cytoplasmic domain-like
Shal_0340	SSF161111	Cation efflux protein transmembrane domain-like
Shal_0341	SSF46689	Homeodomain-like
Shal_0341	SSF52172	CheY-like
Shal_0341	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0342	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_0342	SSF55785	PYP-like sensor domain (PAS domain)
Shal_0342	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_0344	SSF141488	YdhA-like
Shal_0345	SSF52317	Class I glutamine amidotransferase-like
Shal_0346	SSF56796	Dehydroquinate synthase-like
Shal_0347	SSF46785	"Winged helix" DNA-binding domain
Shal_0347	SSF54909	Dimeric alpha+beta barrel
Shal_0349	SSF110296	Oligoxyloglucan reducing end-specific cellobiohydrolase
Shal_0350	SSF47413	lambda repressor-like DNA-binding domains
Shal_0352	SSF118215	Proton glutamate symport protein
Shal_0353	SSF54368	Glutamine synthetase, N-terminal domain
Shal_0353	SSF55931	Glutamine synthetase/guanido kinase
Shal_0354	SSF50447	Translation proteins
Shal_0354	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0354	SSF54980	EF-G C-terminal domain-like
Shal_0355	SSF158442	DsbB-like
Shal_0355	SSF63825	YWTD domain
Shal_0356	SSF53613	Ribokinase-like
Shal_0357	SSF103473	MFS general substrate transporter
Shal_0357	SSF54862	4Fe-4S ferredoxins
Shal_0358	SSF111474	Coronavirus S2 glycoprotein
Shal_0361	SSF53474	alpha/beta-Hydrolases
Shal_0363	SSF69500	DTD-like
Shal_0365	SSF52821	Rhodanese/Cell cycle control phosphatase
Shal_0366	SSF53901	Thiolase-like
Shal_0367	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_0368	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_0369	SSF53901	Thiolase-like
Shal_0371	SSF51905	FAD/NAD(P)-binding domain
Shal_0372	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_0373	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
Shal_0374	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_0375	SSF48557	L-aspartase-like
Shal_0376	SSF53448	Nucleotide-diphospho-sugar transferases
Shal_0377	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_0378	SSF56801	Acetyl-CoA synthetase-like
Shal_0380	SSF47336	ACP-like
Shal_0381	SSF47336	ACP-like
Shal_0382	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Shal_0385	SSF50249	Nucleic acid-binding proteins
Shal_0385	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0387	SSF56801	Acetyl-CoA synthetase-like
Shal_0388	SSF75217	alpha/beta knot
Shal_0389	SSF55298	YjgF-like
Shal_0390	SSF109604	HD-domain/PDEase-like
Shal_0390	SSF55021	ACT-like
Shal_0390	SSF81271	TGS-like
Shal_0390	SSF81301	Nucleotidyltransferase
Shal_0391	SSF63562	RPB6/omega subunit-like
Shal_0392	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0394	SSF53448	Nucleotide-diphospho-sugar transferases
Shal_0395	SSF56112	Protein kinase-like (PK-like)
Shal_0396	SSF100950	NagB/RpiA/CoA transferase-like
Shal_0397	SSF143081	BB1717-like
Shal_0398	SSF51338	Composite domain of metallo-dependent hydrolases
Shal_0398	SSF51556	Metallo-dependent hydrolases
Shal_0399	SSF53383	PLP-dependent transferases
Shal_0402	SSF47781	RuvA domain 2-like
Shal_0402	SSF52980	Restriction endonuclease-like
Shal_0403	SSF89155	TorD-like
Shal_0404	SSF50692	ADC-like
Shal_0404	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shal_0406	SSF54862	4Fe-4S ferredoxins
Shal_0407	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_0407	SSF52172	CheY-like
Shal_0408	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_0408	SSF53850	Periplasmic binding protein-like II
Shal_0408	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_0409	SSF51604	Enolase C-terminal domain-like
Shal_0409	SSF54826	Enolase N-terminal domain-like
Shal_0413	SSF46785	"Winged helix" DNA-binding domain
Shal_0413	SSF53850	Periplasmic binding protein-like II
Shal_0414	SSF46785	"Winged helix" DNA-binding domain
Shal_0414	SSF48008	GntR ligand-binding domain-like
Shal_0415	SSF111352	Ammonium transporter
Shal_0417	SSF53167	Purine and uridine phosphorylases
Shal_0418	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0418	SSF56024	Phospholipase D/nuclease
Shal_0420	SSF47413	lambda repressor-like DNA-binding domains
Shal_0422	SSF54211	Ribosomal protein S5 domain 2-like
Shal_0422	SSF55666	Ribonuclease PH domain 2-like
Shal_0423	SSF53271	PRTase-like
Shal_0424	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Shal_0425	SSF53474	alpha/beta-Hydrolases
Shal_0425	SSF82171	DPP6 N-terminal domain-like
Shal_0426	SSF46689	Homeodomain-like
Shal_0426	SSF48498	Tetracyclin repressor-like, C-terminal domain
Shal_0427	SSF51283	dUTPase-like
Shal_0428	SSF102645	CoaB-like
Shal_0428	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Shal_0429	SSF102712	JAB1/MPN domain
Shal_0429	SSF47781	RuvA domain 2-like
Shal_0430	SSF143800	L28p-like
Shal_0431	SSF57829	Zn-binding ribosomal proteins
Shal_0432	SSF53633	Carbamate kinase-like
Shal_0432	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_0434	SSF103481	Multidrug resistance efflux transporter EmrE
Shal_0435	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_0436	SSF47819	HRDC-like
Shal_0436	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0437	SSF48452	TPR-like
Shal_0437	SSF55073	Nucleotide cyclase
Shal_0438	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
Shal_0438	SSF51569	Aldolase
Shal_0439	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Shal_0440	SSF53732	Aconitase iron-sulfur domain
Shal_0441	SSF52016	LeuD/IlvD-like
Shal_0442	SSF56935	Porins
Shal_0443	SSF54427	NTF2-like
Shal_0444	SSF53067	Actin-like ATPase domain
Shal_0446	SSF89447	AbrB/MazE/MraZ-like
Shal_0447	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_0447	SSF81799	Putative methyltransferase TM0872, insert domain
Shal_0449	SSF56519	Penicillin binding protein dimerisation domain
Shal_0449	SSF56601	beta-lactamase/transpeptidase-like
Shal_0450	SSF53244	MurD-like peptide ligases, peptide-binding domain
Shal_0450	SSF53623	MurD-like peptide ligases, catalytic domain
Shal_0450	SSF63418	MurE/MurF N-terminal domain
Shal_0451	SSF53244	MurD-like peptide ligases, peptide-binding domain
Shal_0451	SSF53623	MurD-like peptide ligases, catalytic domain
Shal_0451	SSF63418	MurE/MurF N-terminal domain
Shal_0453	SSF51984	MurCD N-terminal domain
Shal_0453	SSF53244	MurD-like peptide ligases, peptide-binding domain
Shal_0453	SSF53623	MurD-like peptide ligases, catalytic domain
Shal_0455	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Shal_0456	SSF51984	MurCD N-terminal domain
Shal_0456	SSF53244	MurD-like peptide ligases, peptide-binding domain
Shal_0456	SSF53623	MurD-like peptide ligases, catalytic domain
Shal_0458	SSF53067	Actin-like ATPase domain
Shal_0459	SSF52490	Tubulin nucleotide-binding domain-like
Shal_0459	SSF55307	Tubulin C-terminal domain-like
Shal_0460	SSF54211	Ribosomal protein S5 domain 2-like
Shal_0462	SSF51261	Duplicated hybrid motif
Shal_0463	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0463	SSF81767	Pre-protein crosslinking domain of SecA
Shal_0463	SSF81886	Helical scaffold and wing domains of SecA
Shal_0464	SSF55811	Nudix
Shal_0465	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Shal_0466	SSF160950	YacF-like
Shal_0467	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0470	SSF160246	EspE N-terminal domain-like
Shal_0470	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0471	SSF54523	Pili subunits
Shal_0472	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
Shal_0472	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
Shal_0473	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
Shal_0475	SSF46785	"Winged helix" DNA-binding domain
Shal_0475	SSF48008	GntR ligand-binding domain-like
Shal_0476	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Shal_0476	SSF52922	TK C-terminal domain-like
Shal_0477	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
Shal_0477	SSF51230	Single hybrid motif
Shal_0477	SSF52777	CoA-dependent acyltransferases
Shal_0478	SSF51905	FAD/NAD(P)-binding domain
Shal_0478	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Shal_0479	SSF101898	NHL repeat
Shal_0479	SSF141868	EAL domain-like
Shal_0479	SSF55073	Nucleotide cyclase
Shal_0479	SSF55785	PYP-like sensor domain (PAS domain)
Shal_0479	SSF63829	Calcium-dependent phosphotriesterase
Shal_0480	SSF52151	FabD/lysophospholipase-like
Shal_0481	SSF56784	HAD-like
Shal_0482	SSF52016	LeuD/IlvD-like
Shal_0482	SSF53732	Aconitase iron-sulfur domain
Shal_0482	SSF74778	Aconitase B, N-terminal domain
Shal_0484	SSF51726	UROD/MetE-like
Shal_0485	SSF141868	EAL domain-like
Shal_0485	SSF55073	Nucleotide cyclase
Shal_0485	SSF55785	PYP-like sensor domain (PAS domain)
Shal_0487	SSF51246	Rudiment single hybrid motif
Shal_0487	SSF52440	PreATP-grasp domain
Shal_0487	SSF56059	Glutathione synthetase ATP-binding domain-like
Shal_0488	SSF52335	Methylglyoxal synthase-like
Shal_0488	SSF53927	Cytidine deaminase-like
Shal_0489	SSF46955	Putative DNA-binding domain
Shal_0491	SSF52833	Thioredoxin-like
Shal_0492	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shal_0493	SSF50692	ADC-like
Shal_0493	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shal_0494	SSF54862	4Fe-4S ferredoxins
Shal_0495	SSF81342	Transmembrane di-heme cytochromes
Shal_0496	SSF144020	FdhE-like
Shal_0497	SSF53383	PLP-dependent transferases
Shal_0498	SSF46785	"Winged helix" DNA-binding domain
Shal_0498	SSF50447	Translation proteins
Shal_0498	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Shal_0498	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0499	SSF53927	Cytidine deaminase-like
Shal_0501	SSF64307	SirA-like
Shal_0502	SSF75625	YebC-like
Shal_0503	SSF48695	Multiheme cytochromes
Shal_0504	SSF46785	"Winged helix" DNA-binding domain
Shal_0504	SSF53850	Periplasmic binding protein-like II
Shal_0505	SSF111369	HlyD-like secretion proteins
Shal_0506	SSF103473	MFS general substrate transporter
Shal_0507	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_0510	SSF56349	DNA breaking-rejoining enzymes
Shal_0511	SSF56349	DNA breaking-rejoining enzymes
Shal_0514	SSF56672	DNA/RNA polymerases
Shal_0517	SSF56672	DNA/RNA polymerases
Shal_0519	SSF47413	lambda repressor-like DNA-binding domains
Shal_0521	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0522	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0524	SSF50494	Trypsin-like serine proteases
Shal_0525	SSF56281	Metallo-hydrolase/oxidoreductase
Shal_0528	SSF102114	Radical SAM enzymes
Shal_0529	SSF46785	"Winged helix" DNA-binding domain
Shal_0529	SSF53850	Periplasmic binding protein-like II
Shal_0530	SSF46785	"Winged helix" DNA-binding domain
Shal_0530	SSF53850	Periplasmic binding protein-like II
Shal_0531	SSF103088	OmpA-like
Shal_0531	SSF56925	OMPA-like
Shal_0532	SSF50182	Sm-like ribonucleoproteins
Shal_0532	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
Shal_0532	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
Shal_0535	SSF53167	Purine and uridine phosphorylases
Shal_0536	SSF111364	Tsx-like channel
Shal_0538	SSF117892	Band 7/SPFH domain
Shal_0539	SSF117892	Band 7/SPFH domain
Shal_0540	SSF55811	Nudix
Shal_0541	SSF141868	EAL domain-like
Shal_0541	SSF55073	Nucleotide cyclase
Shal_0541	SSF55785	PYP-like sensor domain (PAS domain)
Shal_0542	SSF55298	YjgF-like
Shal_0543	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0545	SSF53474	alpha/beta-Hydrolases
Shal_0548	SSF52833	Thioredoxin-like
Shal_0551	SSF48695	Multiheme cytochromes
Shal_0552	SSF52821	Rhodanese/Cell cycle control phosphatase
Shal_0553	SSF54534	FKBP-like
Shal_0554	SSF48452	TPR-like
Shal_0555	SSF54862	4Fe-4S ferredoxins
Shal_0557	SSF160387	NosL/MerB-like
Shal_0558	SSF51126	Pectin lyase-like
Shal_0559	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0561	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_0567	SSF48695	Multiheme cytochromes
Shal_0568	SSF52821	Rhodanese/Cell cycle control phosphatase
Shal_0569	SSF54534	FKBP-like
Shal_0570	SSF48452	TPR-like
Shal_0571	SSF54862	4Fe-4S ferredoxins
Shal_0573	SSF160387	NosL/MerB-like
Shal_0574	SSF51126	Pectin lyase-like
Shal_0575	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0577	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_0578	SSF102546	RbsD-like
Shal_0579	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0581	SSF53822	Periplasmic binding protein-like I
Shal_0582	SSF53613	Ribokinase-like
Shal_0583	SSF47413	lambda repressor-like DNA-binding domains
Shal_0583	SSF53822	Periplasmic binding protein-like I
Shal_0584	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Shal_0584	SSF63380	Riboflavin synthase domain-like
Shal_0585	SSF143968	UbiD C-terminal domain-like
Shal_0585	SSF50475	FMN-binding split barrel
Shal_0587	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_0588	SSF52833	Thioredoxin-like
Shal_0590	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_0590	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Shal_0591	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Shal_0592	SSF52833	Thioredoxin-like
Shal_0594	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_0595	SSF51230	Single hybrid motif
Shal_0596	SSF52304	Type II 3-dehydroquinate dehydratase
Shal_0597	SSF75620	Release factor
Shal_0598	SSF52091	SpoIIaa-like
Shal_0601	SSF56954	Outer membrane efflux proteins (OEP)
Shal_0602	SSF111369	HlyD-like secretion proteins
Shal_0603	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shal_0603	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shal_0603	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_0604	SSF55166	Hedgehog/DD-peptidase
Shal_0605	SSF51197	Clavaminate synthase-like
Shal_0606	SSF52151	FabD/lysophospholipase-like
Shal_0607	SSF88697	PUA domain-like
Shal_0608	SSF55120	Pseudouridine synthase
Shal_0609	SSF56300	Metallo-dependent phosphatases
Shal_0610	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_0611	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_0612	SSF46689	Homeodomain-like
Shal_0612	SSF52172	CheY-like
Shal_0614	SSF48695	Multiheme cytochromes
Shal_0616	SSF46626	Cytochrome c
Shal_0617	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_0618	SSF46785	"Winged helix" DNA-binding domain
Shal_0618	SSF53850	Periplasmic binding protein-like II
Shal_0619	SSF56935	Porins
Shal_0621	SSF47598	Ribbon-helix-helix
Shal_0622	SSF53383	PLP-dependent transferases
Shal_0623	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_0623	SSF53633	Carbamate kinase-like
Shal_0623	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Shal_0624	SSF51730	FAD-linked oxidoreductase
Shal_0625	SSF51316	Mss4-like
Shal_0627	SSF103481	Multidrug resistance efflux transporter EmrE
Shal_0628	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0629	SSF53187	Zn-dependent exopeptidases
Shal_0631	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0632	SSF103473	MFS general substrate transporter
Shal_0633	SSF50249	Nucleic acid-binding proteins
Shal_0634	SSF46689	Homeodomain-like
Shal_0634	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0635	SSF53671	Aspartate/ornithine carbamoyltransferase
Shal_0636	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Shal_0637	SSF53187	Zn-dependent exopeptidases
Shal_0637	SSF55031	Bacterial exopeptidase dimerisation domain
Shal_0638	SSF51338	Composite domain of metallo-dependent hydrolases
Shal_0638	SSF51556	Metallo-dependent hydrolases
Shal_0639	SSF53633	Carbamate kinase-like
Shal_0640	SSF46548	alpha-helical ferredoxin
Shal_0640	SSF51971	Nucleotide-binding domain
Shal_0640	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Shal_0640	SSF63380	Riboflavin synthase domain-like
Shal_0641	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Shal_0641	SSF52922	TK C-terminal domain-like
Shal_0641	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
Shal_0641	SSF54862	4Fe-4S ferredoxins
Shal_0642	SSF74653	TolA/TonB C-terminal domain
Shal_0645	SSF51971	Nucleotide-binding domain
Shal_0647	SSF53448	Nucleotide-diphospho-sugar transferases
Shal_0648	SSF46548	alpha-helical ferredoxin
Shal_0648	SSF51395	FMN-linked oxidoreductases
Shal_0648	SSF51971	Nucleotide-binding domain
Shal_0648	SSF54862	4Fe-4S ferredoxins
Shal_0649	SSF51338	Composite domain of metallo-dependent hydrolases
Shal_0649	SSF51556	Metallo-dependent hydrolases
Shal_0650	SSF55298	YjgF-like
Shal_0651	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
Shal_0651	SSF56003	Molybdenum cofactor-binding domain
Shal_0652	SSF47741	CO dehydrogenase ISP C-domain like
Shal_0652	SSF54292	2Fe-2S ferredoxin-like
Shal_0653	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
Shal_0653	SSF56176	FAD-binding/transporter-associated domain-like
Shal_0654	SSF53671	Aspartate/ornithine carbamoyltransferase
Shal_0655	SSF54893	Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
Shal_0655	SSF57825	Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
Shal_0656	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
Shal_0656	SSF56176	FAD-binding/transporter-associated domain-like
Shal_0657	SSF47741	CO dehydrogenase ISP C-domain like
Shal_0657	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
Shal_0657	SSF56003	Molybdenum cofactor-binding domain
Shal_0659	SSF51338	Composite domain of metallo-dependent hydrolases
Shal_0659	SSF51556	Metallo-dependent hydrolases
Shal_0661	SSF111364	Tsx-like channel
Shal_0662	SSF46548	alpha-helical ferredoxin
Shal_0662	SSF50692	ADC-like
Shal_0662	SSF51971	Nucleotide-binding domain
Shal_0662	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shal_0662	SSF54292	2Fe-2S ferredoxin-like
Shal_0662	SSF54862	4Fe-4S ferredoxins
Shal_0664	SSF74650	Galactose mutarotase-like
Shal_0665	SSF54211	Ribosomal protein S5 domain 2-like
Shal_0665	SSF55060	GHMP Kinase, C-terminal domain
Shal_0667	SSF49303	beta-Galactosidase/glucuronidase domain
Shal_0667	SSF49785	Galactose-binding domain-like
Shal_0667	SSF51445	(Trans)glycosidases
Shal_0667	SSF74650	Galactose mutarotase-like
Shal_0668	SSF69322	Tricorn protease domain 2
Shal_0669	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_0670	SSF52833	Thioredoxin-like
Shal_0670	SSF74863	Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
Shal_0671	SSF54913	GlnB-like
Shal_0673	SSF56112	Protein kinase-like (PK-like)
Shal_0675	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_0676	SSF56935	Porins
Shal_0677	SSF56935	Porins
Shal_0678	SSF69572	Activating enzymes of the ubiquitin-like proteins
Shal_0681	SSF46689	Homeodomain-like
Shal_0682	SSF54893	Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
Shal_0682	SSF57825	Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
Shal_0683	SSF53671	Aspartate/ornithine carbamoyltransferase
Shal_0684	SSF103473	MFS general substrate transporter
Shal_0685	SSF103481	Multidrug resistance efflux transporter EmrE
Shal_0686	SSF55298	YjgF-like
Shal_0687	SSF53671	Aspartate/ornithine carbamoyltransferase
Shal_0688	SSF53633	Carbamate kinase-like
Shal_0689	SSF55909	Pentein
Shal_0690	SSF55909	Pentein
Shal_0692	SSF48310	Aldehyde ferredoxin oxidoreductase, C-terminal domains
Shal_0692	SSF56228	Aldehyde ferredoxin oxidoreductase, N-terminal domain
Shal_0693	SSF54862	4Fe-4S ferredoxins
Shal_0697	SSF63848	Cell-division inhibitor MinC, C-terminal domain
Shal_0698	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_0699	SSF53649	Alkaline phosphatase-like
Shal_0700	SSF52440	PreATP-grasp domain
Shal_0700	SSF56059	Glutathione synthetase ATP-binding domain-like
Shal_0701	SSF75217	alpha/beta knot
Shal_0701	SSF88697	PUA domain-like
Shal_0702	SSF54060	His-Me finger endonucleases
Shal_0704	SSF53182	Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
Shal_0705	SSF46785	"Winged helix" DNA-binding domain
Shal_0705	SSF53850	Periplasmic binding protein-like II
Shal_0706	SSF51230	Single hybrid motif
Shal_0706	SSF51246	Rudiment single hybrid motif
Shal_0706	SSF52096	ClpP/crotonase
Shal_0706	SSF52440	PreATP-grasp domain
Shal_0706	SSF56059	Glutathione synthetase ATP-binding domain-like
Shal_0708	SSF56784	HAD-like
Shal_0708	SSF81653	Calcium ATPase, transduction domain A
Shal_0708	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
Shal_0708	SSF81665	Calcium ATPase, transmembrane domain M
Shal_0709	SSF46785	"Winged helix" DNA-binding domain
Shal_0709	SSF53850	Periplasmic binding protein-like II
Shal_0711	SSF52402	Adenine nucleotide alpha hydrolases-like
Shal_0712	SSF48695	Multiheme cytochromes
Shal_0713	SSF54862	4Fe-4S ferredoxins
Shal_0714	SSF54862	4Fe-4S ferredoxins
Shal_0715	SSF50692	ADC-like
Shal_0715	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shal_0717	SSF159245	AttH-like
Shal_0719	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0720	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Shal_0720	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_0720	SSF52172	CheY-like
Shal_0720	SSF55785	PYP-like sensor domain (PAS domain)
Shal_0720	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_0721	SSF109604	HD-domain/PDEase-like
Shal_0721	SSF52172	CheY-like
Shal_0722	SSF101790	Aminomethyltransferase beta-barrel domain
Shal_0722	SSF103025	Folate-binding domain
Shal_0723	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_0723	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Shal_0723	SSF55021	ACT-like
Shal_0726	SSF53167	Purine and uridine phosphorylases
Shal_0727	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_0729	SSF56634	Heme-dependent catalase-like
Shal_0732	SSF50494	Trypsin-like serine proteases
Shal_0733	SSF55120	Pseudouridine synthase
Shal_0733	SSF55174	Alpha-L RNA-binding motif
Shal_0737	SSF53383	PLP-dependent transferases
Shal_0738	SSF48452	TPR-like
Shal_0738	SSF55073	Nucleotide cyclase
Shal_0739	SSF56935	Porins
Shal_0741	SSF55469	FMN-dependent nitroreductase-like
Shal_0743	SSF51984	MurCD N-terminal domain
Shal_0743	SSF53244	MurD-like peptide ligases, peptide-binding domain
Shal_0743	SSF53623	MurD-like peptide ligases, catalytic domain
Shal_0744	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Shal_0745	SSF53271	PRTase-like
Shal_0746	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0749	SSF52374	Nucleotidylyl transferase
Shal_0750	SSF51621	Phosphoenolpyruvate/pyruvate domain
Shal_0751	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
Shal_0752	SSF81301	Nucleotidyltransferase
Shal_0752	SSF81891	Poly A polymerase C-terminal region-like
Shal_0753	SSF52374	Nucleotidylyl transferase
Shal_0754	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
Shal_0754	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Shal_0756	SSF53187	Zn-dependent exopeptidases
Shal_0757	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_0757	SSF52172	CheY-like
Shal_0759	SSF55144	LigT-like
Shal_0760	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0761	SSF53955	Lysozyme-like
Shal_0761	SSF56601	beta-lactamase/transpeptidase-like
Shal_0763	SSF103473	MFS general substrate transporter
Shal_0764	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_0766	SSF56935	Porins
Shal_0773	SSF118215	Proton glutamate symport protein
Shal_0774	SSF46689	Homeodomain-like
Shal_0774	SSF52172	CheY-like
Shal_0774	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0775	SSF53850	Periplasmic binding protein-like II
Shal_0775	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_0776	SSF48695	Multiheme cytochromes
Shal_0776	SSF51905	FAD/NAD(P)-binding domain
Shal_0776	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Shal_0777	SSF143422	Transposase IS200-like
Shal_0778	SSF53822	Periplasmic binding protein-like I
Shal_0779	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0784	SSF56655	Carbohydrate phosphatase
Shal_0785	SSF53474	alpha/beta-Hydrolases
Shal_0785	SSF82171	DPP6 N-terminal domain-like
Shal_0786	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_0786	SSF52172	CheY-like
Shal_0788	SSF53633	Carbamate kinase-like
Shal_0788	SSF55021	ACT-like
Shal_0789	SSF53187	Zn-dependent exopeptidases
Shal_0790	SSF46785	"Winged helix" DNA-binding domain
Shal_0790	SSF54909	Dimeric alpha+beta barrel
Shal_0791	SSF55120	Pseudouridine synthase
Shal_0793	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_0795	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_0795	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Shal_0796	SSF53474	alpha/beta-Hydrolases
Shal_0798	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_0799	SSF52833	Thioredoxin-like
Shal_0800	SSF51905	FAD/NAD(P)-binding domain
Shal_0800	SSF52833	Thioredoxin-like
Shal_0801	SSF55073	Nucleotide cyclase
Shal_0803	SSF52833	Thioredoxin-like
Shal_0804	SSF103088	OmpA-like
Shal_0805	SSF51905	FAD/NAD(P)-binding domain
Shal_0805	SSF54373	FAD-linked reductases, C-terminal domain
Shal_0807	SSF46548	alpha-helical ferredoxin
Shal_0807	SSF50692	ADC-like
Shal_0807	SSF51971	Nucleotide-binding domain
Shal_0807	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shal_0807	SSF54292	2Fe-2S ferredoxin-like
Shal_0807	SSF54862	4Fe-4S ferredoxins
Shal_0808	SSF141571	Pentapeptide repeat-like
Shal_0808	SSF81324	Voltage-gated potassium channels
Shal_0809	SSF75620	Release factor
Shal_0810	SSF50249	Nucleic acid-binding proteins
Shal_0810	SSF55681	Class II aaRS and biotin synthetases
Shal_0811	SSF141868	EAL domain-like
Shal_0811	SSF55073	Nucleotide cyclase
Shal_0811	SSF55785	PYP-like sensor domain (PAS domain)
Shal_0812	SSF55120	Pseudouridine synthase
Shal_0813	SSF100950	NagB/RpiA/CoA transferase-like
Shal_0814	SSF55469	FMN-dependent nitroreductase-like
Shal_0815	SSF51182	RmlC-like cupins
Shal_0817	SSF50729	PH domain-like
Shal_0818	SSF82649	SufE/NifU
Shal_0819	SSF53383	PLP-dependent transferases
Shal_0820	SSF51430	NAD(P)-linked oxidoreductase
Shal_0821	SSF46785	"Winged helix" DNA-binding domain
Shal_0821	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_0822	SSF52972	ITPase-like
Shal_0824	SSF143548	Serine metabolism enzymes domain
Shal_0825	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_0827	SSF118215	Proton glutamate symport protein
Shal_0830	SSF55073	Nucleotide cyclase
Shal_0831	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_0836	SSF52980	Restriction endonuclease-like
Shal_0839	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_0840	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_0841	SSF51905	FAD/NAD(P)-binding domain
Shal_0842	SSF52467	DHS-like NAD/FAD-binding domain
Shal_0842	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Shal_0843	SSF55973	S-adenosylmethionine synthetase
Shal_0844	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Shal_0844	SSF52922	TK C-terminal domain-like
Shal_0845	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_0845	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Shal_0846	SSF53748	Phosphoglycerate kinase
Shal_0847	SSF51569	Aldolase
Shal_0849	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_0852	SSF103190	Sensory domain-like
Shal_0852	SSF55073	Nucleotide cyclase
Shal_0852	SSF55785	PYP-like sensor domain (PAS domain)
Shal_0853	SSF102114	Radical SAM enzymes
Shal_0854	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shal_0854	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shal_0854	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_0855	SSF111369	HlyD-like secretion proteins
Shal_0857	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0858	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_0860	SSF56349	DNA breaking-rejoining enzymes
Shal_0861	SSF52833	Thioredoxin-like
Shal_0861	SSF54423	DsbC/DsbG N-terminal domain-like
Shal_0862	SSF64182	DHH phosphoesterases
Shal_0863	SSF46785	"Winged helix" DNA-binding domain
Shal_0863	SSF54909	Dimeric alpha+beta barrel
Shal_0866	SSF56925	OMPA-like
Shal_0867	SSF51905	FAD/NAD(P)-binding domain
Shal_0867	SSF54373	FAD-linked reductases, C-terminal domain
Shal_0868	SSF46689	Homeodomain-like
Shal_0868	SSF52317	Class I glutamine amidotransferase-like
Shal_0870	SSF100950	NagB/RpiA/CoA transferase-like
Shal_0870	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
Shal_0872	SSF56219	DNase I-like
Shal_0873	SSF82185	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
Shal_0874	SSF56300	Metallo-dependent phosphatases
Shal_0875	SSF53271	PRTase-like
Shal_0877	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shal_0877	SSF63737	Leukotriene A4 hydrolase N-terminal domain
Shal_0879	SSF48452	TPR-like
Shal_0881	SSF54534	FKBP-like
Shal_0882	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
Shal_0882	SSF56925	OMPA-like
Shal_0884	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_0884	SSF52172	CheY-like
Shal_0885	SSF158472	HAMP domain-like
Shal_0885	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_0886	SSF48695	Multiheme cytochromes
Shal_0887	SSF52499	Isochorismatase-like hydrolases
Shal_0888	SSF54913	GlnB-like
Shal_0889	SSF111352	Ammonium transporter
Shal_0891	SSF48452	TPR-like
Shal_0892	SSF51569	Aldolase
Shal_0894	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0894	SSF90123	ABC transporter transmembrane region
Shal_0896	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Shal_0896	SSF63380	Riboflavin synthase domain-like
Shal_0897	SSF53850	Periplasmic binding protein-like II
Shal_0898	SSF161098	MetI-like
Shal_0899	SSF50331	MOP-like
Shal_0899	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0900	SSF54909	Dimeric alpha+beta barrel
Shal_0901	SSF51182	RmlC-like cupins
Shal_0902	SSF46785	"Winged helix" DNA-binding domain
Shal_0902	SSF55252	C-terminal domain of arginine repressor
Shal_0903	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_0903	SSF56327	LDH C-terminal domain-like
Shal_0904	SSF48576	Terpenoid synthases
Shal_0905	SSF141091	L21p-like
Shal_0906	SSF110324	Ribosomal L27 protein-like
Shal_0907	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0907	SSF82051	Obg GTP-binding protein N-terminal domain
Shal_0910	SSF53597	Dihydrofolate reductase-like
Shal_0912	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shal_0913	SSF56300	Metallo-dependent phosphatases
Shal_0914	SSF110069	ApaG-like
Shal_0915	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_0916	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Shal_0917	SSF109998	Triger factor/SurA peptide-binding domain-like
Shal_0917	SSF54534	FKBP-like
Shal_0919	SSF56112	Protein kinase-like (PK-like)
Shal_0920	SSF53448	Nucleotide-diphospho-sugar transferases
Shal_0921	SSF46565	Chaperone J-domain
Shal_0922	SSF56925	OMPA-like
Shal_0923	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_0923	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Shal_0924	SSF51246	Rudiment single hybrid motif
Shal_0924	SSF52440	PreATP-grasp domain
Shal_0924	SSF56059	Glutathione synthetase ATP-binding domain-like
Shal_0926	SSF111369	HlyD-like secretion proteins
Shal_0927	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0930	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_0930	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_0931	SSF52172	CheY-like
Shal_0934	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_0936	SSF51197	Clavaminate synthase-like
Shal_0937	SSF52402	Adenine nucleotide alpha hydrolases-like
Shal_0938	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Shal_0939	SSF52218	Flavoproteins
Shal_0940	SSF46785	"Winged helix" DNA-binding domain
Shal_0941	SSF55120	Pseudouridine synthase
Shal_0941	SSF55174	Alpha-L RNA-binding motif
Shal_0943	SSF103473	MFS general substrate transporter
Shal_0946	SSF46785	"Winged helix" DNA-binding domain
Shal_0946	SSF53850	Periplasmic binding protein-like II
Shal_0948	SSF143447	AMMECR1-like
Shal_0950	SSF102114	Radical SAM enzymes
Shal_0952	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shal_0953	SSF46589	tRNA-binding arm
Shal_0953	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Shal_0953	SSF50677	ValRS/IleRS/LeuRS editing domain
Shal_0953	SSF52374	Nucleotidylyl transferase
Shal_0954	SSF102400	DNA polymerase III chi subunit
Shal_0955	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0956	SSF51395	FMN-linked oxidoreductases
Shal_0957	SSF46785	"Winged helix" DNA-binding domain
Shal_0957	SSF53850	Periplasmic binding protein-like II
Shal_0958	SSF52833	Thioredoxin-like
Shal_0959	SSF54427	NTF2-like
Shal_0961	SSF54631	CBS-domain pair
Shal_0961	SSF56176	FAD-binding/transporter-associated domain-like
Shal_0962	SSF52949	Macro domain-like
Shal_0962	SSF53187	Zn-dependent exopeptidases
Shal_0967	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_0968	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shal_0969	SSF52743	Subtilisin-like
Shal_0971	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0972	SSF53092	Creatinase/prolidase N-terminal domain
Shal_0972	SSF55920	Creatinase/aminopeptidase
Shal_0974	SSF53092	Creatinase/prolidase N-terminal domain
Shal_0974	SSF55920	Creatinase/aminopeptidase
Shal_0975	SSF54534	FKBP-like
Shal_0976	SSF103088	OmpA-like
Shal_0976	SSF56925	OMPA-like
Shal_0977	SSF49373	Invasin/intimin cell-adhesion fragments
Shal_0978	SSF50249	Nucleic acid-binding proteins
Shal_0979	SSF46785	"Winged helix" DNA-binding domain
Shal_0980	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_0984	SSF51182	RmlC-like cupins
Shal_0985	SSF53720	ALDH-like
Shal_0986	SSF53383	PLP-dependent transferases
Shal_0987	SSF53720	ALDH-like
Shal_0988	SSF46955	Putative DNA-binding domain
Shal_0988	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_0989	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_0990	SSF55154	CYTH-like phosphatases
Shal_0991	SSF53681	Aspartate/glutamate racemase
Shal_0992	SSF51905	FAD/NAD(P)-binding domain
Shal_0993	SSF47413	lambda repressor-like DNA-binding domains
Shal_0993	SSF51182	RmlC-like cupins
Shal_0994	SSF52317	Class I glutamine amidotransferase-like
Shal_0995	SSF54368	Glutamine synthetase, N-terminal domain
Shal_0995	SSF55931	Glutamine synthetase/guanido kinase
Shal_0996	SSF53850	Periplasmic binding protein-like II
Shal_0997	SSF50331	MOP-like
Shal_0997	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_0998	SSF161098	MetI-like
Shal_0999	SSF161098	MetI-like
Shal_1000	SSF51905	FAD/NAD(P)-binding domain
Shal_1001	SSF53720	ALDH-like
Shal_1002	SSF53383	PLP-dependent transferases
Shal_1003	SSF52402	Adenine nucleotide alpha hydrolases-like
Shal_1004	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Shal_1004	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Shal_1005	SSF117023	DNA primase DnaG, C-terminal domain
Shal_1005	SSF56731	DNA primase core
Shal_1005	SSF57783	Zinc beta-ribbon
Shal_1006	SSF89095	GatB/YqeY motif
Shal_1008	SSF53067	Actin-like ATPase domain
Shal_1011	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Shal_1012	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
Shal_1014	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_1015	SSF141523	L,D-transpeptidase catalytic domain-like
Shal_1015	SSF54106	LysM domain
Shal_1016	SSF58042	Outer membrane lipoprotein
Shal_1017	SSF81301	Nucleotidyltransferase
Shal_1017	SSF81891	Poly A polymerase C-terminal region-like
Shal_1018	SSF47090	PGBD-like
Shal_1018	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1021	SSF53383	PLP-dependent transferases
Shal_1025	SSF48695	Multiheme cytochromes
Shal_1026	SSF143631	ApbE-like
Shal_1030	SSF46626	Cytochrome c
Shal_1031	SSF46626	Cytochrome c
Shal_1032	SSF56524	Oxidoreductase molybdopterin-binding domain
Shal_1032	SSF81296	E set domains
Shal_1033	SSF46626	Cytochrome c
Shal_1034	SSF81340	Clc chloride channel
Shal_1036	SSF89360	HesB-like domain
Shal_1039	SSF53649	Alkaline phosphatase-like
Shal_1040	SSF53474	alpha/beta-Hydrolases
Shal_1040	SSF82171	DPP6 N-terminal domain-like
Shal_1041	SSF56935	Porins
Shal_1042	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_1042	SSF75011	3-carboxy-cis,cis-mucoante lactonizing enzyme
Shal_1042	SSF82171	DPP6 N-terminal domain-like
Shal_1043	SSF53067	Actin-like ATPase domain
Shal_1044	SSF51261	Duplicated hybrid motif
Shal_1045	SSF52374	Nucleotidylyl transferase
Shal_1045	SSF55174	Alpha-L RNA-binding motif
Shal_1047	SSF54427	NTF2-like
Shal_1051	SSF53167	Purine and uridine phosphorylases
Shal_1052	SSF55073	Nucleotide cyclase
Shal_1053	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_1054	SSF46785	"Winged helix" DNA-binding domain
Shal_1057	SSF51905	FAD/NAD(P)-binding domain
Shal_1057	SSF54373	FAD-linked reductases, C-terminal domain
Shal_1058	SSF53720	ALDH-like
Shal_1059	SSF46689	Homeodomain-like
Shal_1059	SSF48498	Tetracyclin repressor-like, C-terminal domain
Shal_1060	SSF46548	alpha-helical ferredoxin
Shal_1060	SSF51971	Nucleotide-binding domain
Shal_1061	SSF51395	FMN-linked oxidoreductases
Shal_1061	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Shal_1061	SSF69336	Alpha subunit of glutamate synthase, C-terminal domain
Shal_1062	SSF102114	Radical SAM enzymes
Shal_1063	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Shal_1064	SSF46785	"Winged helix" DNA-binding domain
Shal_1064	SSF53850	Periplasmic binding protein-like II
Shal_1065	SSF55073	Nucleotide cyclase
Shal_1066	SSF52980	Restriction endonuclease-like
Shal_1067	SSF55811	Nudix
Shal_1068	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
Shal_1068	SSF51621	Phosphoenolpyruvate/pyruvate domain
Shal_1068	SSF52009	Phosphohistidine domain
Shal_1068	SSF55781	GAF domain-like
Shal_1070	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
Shal_1073	SSF46785	"Winged helix" DNA-binding domain
Shal_1073	SSF53850	Periplasmic binding protein-like II
Shal_1074	SSF109910	YgfY-like
Shal_1076	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
Shal_1076	SSF51905	FAD/NAD(P)-binding domain
Shal_1076	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Shal_1077	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Shal_1077	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Shal_1078	SSF89069	N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
Shal_1081	SSF50447	Translation proteins
Shal_1081	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1081	SSF54980	EF-G C-terminal domain-like
Shal_1082	SSF51306	LexA/Signal peptidase
Shal_1083	SSF54768	dsRNA-binding domain-like
Shal_1083	SSF69065	RNase III domain-like
Shal_1084	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1084	SSF54814	Prokaryotic type KH domain (KH-domain type II)
Shal_1085	SSF50249	Nucleic acid-binding proteins
Shal_1086	SSF63892	Pyridoxine 5'-phosphate synthase
Shal_1087	SSF56214	4'-phosphopantetheinyl transferase
Shal_1088	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_1089	SSF54909	Dimeric alpha+beta barrel
Shal_1090	SSF82185	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
Shal_1091	SSF48695	Multiheme cytochromes
Shal_1092	SSF48695	Multiheme cytochromes
Shal_1094	SSF54631	CBS-domain pair
Shal_1094	SSF56176	FAD-binding/transporter-associated domain-like
Shal_1096	SSF47446	Signal peptide-binding domain
Shal_1096	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1097	SSF54565	Ribosomal protein S16
Shal_1098	SSF50346	PRC-barrel domain
Shal_1098	SSF50447	Translation proteins
Shal_1099	SSF75217	alpha/beta knot
Shal_1100	SSF50104	Translation proteins SH3-like domain
Shal_1101	SSF51569	Aldolase
Shal_1102	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Shal_1102	SSF48600	Chorismate mutase II
Shal_1102	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_1103	SSF56821	Prismane protein-like
Shal_1104	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Shal_1104	SSF54292	2Fe-2S ferredoxin-like
Shal_1104	SSF63380	Riboflavin synthase domain-like
Shal_1107	SSF48600	Chorismate mutase II
Shal_1107	SSF51569	Aldolase
Shal_1107	SSF53850	Periplasmic binding protein-like II
Shal_1107	SSF55021	ACT-like
Shal_1108	SSF69754	Ribosome binding protein Y (YfiA homologue)
Shal_1109	SSF81342	Transmembrane di-heme cytochromes
Shal_1110	SSF47175	Cytochromes
Shal_1111	SSF48295	TrpR-like
Shal_1113	SSF54534	FKBP-like
Shal_1114	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_1114	SSF53633	Carbamate kinase-like
Shal_1114	SSF55021	ACT-like
Shal_1114	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Shal_1115	SSF54211	Ribosomal protein S5 domain 2-like
Shal_1115	SSF55060	GHMP Kinase, C-terminal domain
Shal_1116	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Shal_1118	SSF51658	Xylose isomerase-like
Shal_1121	SSF53697	SIS domain
Shal_1122	SSF51569	Aldolase
Shal_1123	SSF103088	OmpA-like
Shal_1123	SSF56925	OMPA-like
Shal_1124	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Shal_1127	SSF46785	"Winged helix" DNA-binding domain
Shal_1128	SSF46992	Ribosomal protein S20
Shal_1130	SSF52374	Nucleotidylyl transferase
Shal_1130	SSF82114	Riboflavin kinase-like
Shal_1131	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Shal_1131	SSF50677	ValRS/IleRS/LeuRS editing domain
Shal_1131	SSF52374	Nucleotidylyl transferase
Shal_1133	SSF54534	FKBP-like
Shal_1138	SSF89372	Fucose-specific lectin
Shal_1139	SSF54523	Pili subunits
Shal_1141	SSF54523	Pili subunits
Shal_1142	SSF54523	Pili subunits
Shal_1143	SSF54913	GlnB-like
Shal_1144	SSF47413	lambda repressor-like DNA-binding domains
Shal_1144	SSF53822	Periplasmic binding protein-like I
Shal_1145	SSF56935	Porins
Shal_1146	SSF51905	FAD/NAD(P)-binding domain
Shal_1148	SSF49384	Carbohydrate-binding domain
Shal_1148	SSF51445	(Trans)glycosidases
Shal_1148	SSF55545	beta-N-acetylhexosaminidase-like domain
Shal_1148	SSF81296	E set domains
Shal_1149	SSF53067	Actin-like ATPase domain
Shal_1150	SSF51338	Composite domain of metallo-dependent hydrolases
Shal_1150	SSF51556	Metallo-dependent hydrolases
Shal_1152	SSF103473	MFS general substrate transporter
Shal_1153	SSF111148	YggX-like
Shal_1154	SSF48150	DNA-glycosylase
Shal_1154	SSF55811	Nudix
Shal_1155	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_1157	SSF56601	beta-lactamase/transpeptidase-like
Shal_1159	SSF46785	"Winged helix" DNA-binding domain
Shal_1159	SSF53850	Periplasmic binding protein-like II
Shal_1163	SSF46785	"Winged helix" DNA-binding domain
Shal_1163	SSF53850	Periplasmic binding protein-like II
Shal_1166	SSF102114	Radical SAM enzymes
Shal_1167	SSF52972	ITPase-like
Shal_1169	SSF69786	YggU-like
Shal_1171	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Shal_1171	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_1172	SSF51419	PLP-binding barrel
Shal_1173	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1174	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1175	SSF53800	Chelatase
Shal_1176	SSF53098	Ribonuclease H-like
Shal_1177	SSF143456	VC0467-like
Shal_1178	SSF55159	eIF1-like
Shal_1181	SSF46785	"Winged helix" DNA-binding domain
Shal_1181	SSF53850	Periplasmic binding protein-like II
Shal_1183	SSF56935	Porins
Shal_1184	SSF103088	OmpA-like
Shal_1184	SSF103647	TSP type-3 repeat
Shal_1185	SSF50182	Sm-like ribonucleoproteins
Shal_1185	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
Shal_1185	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
Shal_1187	SSF53383	PLP-dependent transferases
Shal_1189	SSF52799	(Phosphotyrosine protein) phosphatases II
Shal_1190	SSF46689	Homeodomain-like
Shal_1190	SSF53098	Ribonuclease H-like
Shal_1191	SSF51905	FAD/NAD(P)-binding domain
Shal_1194	SSF111369	HlyD-like secretion proteins
Shal_1195	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shal_1195	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shal_1195	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_1196	SSF56796	Dehydroquinate synthase-like
Shal_1198	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shal_1198	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shal_1198	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_1199	SSF111369	HlyD-like secretion proteins
Shal_1200	SSF56300	Metallo-dependent phosphatases
Shal_1202	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1203	SSF53383	PLP-dependent transferases
Shal_1205	SSF53597	Dihydrofolate reductase-like
Shal_1205	SSF53927	Cytidine deaminase-like
Shal_1206	SSF63380	Riboflavin synthase domain-like
Shal_1207	SSF142695	RibA-like
Shal_1207	SSF55821	YrdC/RibB
Shal_1208	SSF52121	Lumazine synthase
Shal_1209	SSF48013	NusB-like
Shal_1210	SSF55326	PurM N-terminal domain-like
Shal_1210	SSF56042	PurM C-terminal domain-like
Shal_1211	SSF101307	YutG-like
Shal_1212	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1213	SSF48498	Tetracyclin repressor-like, C-terminal domain
Shal_1215	SSF46785	"Winged helix" DNA-binding domain
Shal_1215	SSF53850	Periplasmic binding protein-like II
Shal_1217	SSF158472	HAMP domain-like
Shal_1217	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Shal_1217	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_1217	SSF52172	CheY-like
Shal_1217	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_1218	SSF50249	Nucleic acid-binding proteins
Shal_1218	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_1219	SSF109604	HD-domain/PDEase-like
Shal_1219	SSF55021	ACT-like
Shal_1219	SSF81271	TGS-like
Shal_1219	SSF81301	Nucleotidyltransferase
Shal_1220	SSF101386	all-alpha NTP pyrophosphatases
Shal_1221	SSF52317	Class I glutamine amidotransferase-like
Shal_1221	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1222	SSF51604	Enolase C-terminal domain-like
Shal_1222	SSF54826	Enolase N-terminal domain-like
Shal_1224	SSF53448	Nucleotide-diphospho-sugar transferases
Shal_1225	SSF69765	IpsF-like
Shal_1226	SSF55120	Pseudouridine synthase
Shal_1227	SSF64167	SurE-like
Shal_1228	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_1229	SSF51261	Duplicated hybrid motif
Shal_1230	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Shal_1230	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Shal_1231	SSF48334	DNA repair protein MutS, domain III
Shal_1231	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1231	SSF53150	DNA repair protein MutS, domain II
Shal_1231	SSF55271	DNA repair protein MutS, domain I
Shal_1232	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1232	SSF54752	RecA protein, C-terminal domain
Shal_1233	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
Shal_1233	SSF50447	Translation proteins
Shal_1233	SSF55186	ThrRS/AlaRS common domain
Shal_1233	SSF55681	Class II aaRS and biotin synthetases
Shal_1234	SSF117130	CsrA-like
Shal_1236	SSF51230	Single hybrid motif
Shal_1236	SSF51569	Aldolase
Shal_1236	SSF89000	post-HMGL domain-like
Shal_1239	SSF118215	Proton glutamate symport protein
Shal_1240	SSF63411	LuxS/MPP-like metallohydrolase
Shal_1241	SSF55931	Glutamine synthetase/guanido kinase
Shal_1243	SSF53955	Lysozyme-like
Shal_1244	SSF55073	Nucleotide cyclase
Shal_1244	SSF55781	GAF domain-like
Shal_1245	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
Shal_1246	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Shal_1246	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Shal_1249	SSF50156	PDZ domain-like
Shal_1249	SSF52096	ClpP/crotonase
Shal_1249	SSF69304	Tricorn protease N-terminal domain
Shal_1249	SSF82171	DPP6 N-terminal domain-like
Shal_1250	SSF111369	HlyD-like secretion proteins
Shal_1253	SSF82784	OsmC-like
Shal_1258	SSF69754	Ribosome binding protein Y (YfiA homologue)
Shal_1259	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_1260	SSF52218	Flavoproteins
Shal_1262	SSF48695	Multiheme cytochromes
Shal_1264	SSF46689	Homeodomain-like
Shal_1265	SSF55718	SCP-like
Shal_1265	SSF56281	Metallo-hydrolase/oxidoreductase
Shal_1266	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Shal_1266	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Shal_1267	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1270	SSF56601	beta-lactamase/transpeptidase-like
Shal_1271	SSF56925	OMPA-like
Shal_1274	SSF63825	YWTD domain
Shal_1275	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Shal_1276	SSF118215	Proton glutamate symport protein
Shal_1276	SSF53850	Periplasmic binding protein-like II
Shal_1280	SSF141868	EAL domain-like
Shal_1281	SSF54631	CBS-domain pair
Shal_1282	SSF55469	FMN-dependent nitroreductase-like
Shal_1283	SSF49777	PEBP-like
Shal_1284	SSF46689	Homeodomain-like
Shal_1285	SSF57783	Zinc beta-ribbon
Shal_1285	SSF82057	Prokaryotic SH3-related domain
Shal_1286	SSF46689	Homeodomain-like
Shal_1286	SSF51215	Regulatory protein AraC
Shal_1287	SSF69118	AhpD-like
Shal_1289	SSF46689	Homeodomain-like
Shal_1291	SSF46785	"Winged helix" DNA-binding domain
Shal_1291	SSF53850	Periplasmic binding protein-like II
Shal_1292	SSF54523	Pili subunits
Shal_1293	SSF141868	EAL domain-like
Shal_1293	SSF55073	Nucleotide cyclase
Shal_1294	SSF52833	Thioredoxin-like
Shal_1295	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shal_1298	SSF52113	BRCT domain
Shal_1299	SSF56349	DNA breaking-rejoining enzymes
Shal_1300	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1302	SSF56349	DNA breaking-rejoining enzymes
Shal_1304	SSF56349	DNA breaking-rejoining enzymes
Shal_1305	SSF52113	BRCT domain
Shal_1317	SSF50044	SH3-domain
Shal_1330	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Shal_1331	SSF53955	Lysozyme-like
Shal_1342	SSF69255	gp5 N-terminal domain-like
Shal_1345	SSF74982	Small protein B (SmpB)
Shal_1346	SSF55961	Bet v1-like
Shal_1347	SSF54285	MoaD/ThiS
Shal_1349	SSF53790	Tetrapyrrole methylase
Shal_1351	SSF48452	TPR-like
Shal_1351	SSF55073	Nucleotide cyclase
Shal_1352	SSF51645	Malate synthase G
Shal_1353	SSF109604	HD-domain/PDEase-like
Shal_1353	SSF55781	GAF domain-like
Shal_1354	SSF54427	NTF2-like
Shal_1355	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shal_1357	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1360	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_1361	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_1362	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
Shal_1362	SSF56300	Metallo-dependent phosphatases
Shal_1363	SSF54631	CBS-domain pair
Shal_1364	SSF102114	Radical SAM enzymes
Shal_1365	SSF48452	TPR-like
Shal_1367	SSF51604	Enolase C-terminal domain-like
Shal_1367	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
Shal_1368	SSF52954	Class II aaRS ABD-related
Shal_1368	SSF55681	Class II aaRS and biotin synthetases
Shal_1369	SSF48452	TPR-like
Shal_1370	SSF50998	Quinoprotein alcohol dehydrogenase-like
Shal_1371	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1374	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shal_1376	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
Shal_1376	SSF54631	CBS-domain pair
Shal_1377	SSF52317	Class I glutamine amidotransferase-like
Shal_1377	SSF52402	Adenine nucleotide alpha hydrolases-like
Shal_1377	SSF54810	GMP synthetase C-terminal dimerisation domain
Shal_1378	SSF53927	Cytidine deaminase-like
Shal_1379	SSF53850	Periplasmic binding protein-like II
Shal_1379	SSF53955	Lysozyme-like
Shal_1380	SSF109736	FGAM synthase PurL, linker domain
Shal_1380	SSF52317	Class I glutamine amidotransferase-like
Shal_1380	SSF55326	PurM N-terminal domain-like
Shal_1380	SSF56042	PurM C-terminal domain-like
Shal_1380	SSF82697	PurS-like
Shal_1385	SSF103190	Sensory domain-like
Shal_1385	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shal_1387	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shal_1387	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shal_1387	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_1388	SSF111369	HlyD-like secretion proteins
Shal_1389	SSF46689	Homeodomain-like
Shal_1389	SSF48498	Tetracyclin repressor-like, C-terminal domain
Shal_1390	SSF54626	Chalcone isomerase
Shal_1392	SSF48452	TPR-like
Shal_1393	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_1394	SSF53383	PLP-dependent transferases
Shal_1395	SSF53448	Nucleotide-diphospho-sugar transferases
Shal_1396	SSF88713	Glycoside hydrolase/deacetylase
Shal_1397	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Shal_1398	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_1399	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_1400	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Shal_1400	SSF52922	TK C-terminal domain-like
Shal_1401	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_1402	SSF52440	PreATP-grasp domain
Shal_1402	SSF56059	Glutathione synthetase ATP-binding domain-like
Shal_1403	SSF51569	Aldolase
Shal_1404	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_1405	SSF118215	Proton glutamate symport protein
Shal_1406	SSF56281	Metallo-hydrolase/oxidoreductase
Shal_1407	SSF46689	Homeodomain-like
Shal_1407	SSF51182	RmlC-like cupins
Shal_1408	SSF53920	Fe-only hydrogenase
Shal_1408	SSF54862	4Fe-4S ferredoxins
Shal_1409	SSF48674	Fe-only hydrogenase smaller subunit
Shal_1410	SSF81342	Transmembrane di-heme cytochromes
Shal_1411	SSF102114	Radical SAM enzymes
Shal_1413	SSF102114	Radical SAM enzymes
Shal_1414	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1415	SSF56281	Metallo-hydrolase/oxidoreductase
Shal_1417	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1418	SSF48452	TPR-like
Shal_1422	SSF140566	FlgN-like
Shal_1423	SSF101498	Anti-sigma factor FlgM
Shal_1425	SSF50341	CheW-like
Shal_1425	SSF52172	CheY-like
Shal_1426	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
Shal_1426	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_1430	SSF117143	Flagellar hook protein flgE
Shal_1431	SSF117143	Flagellar hook protein flgE
Shal_1432	SSF117143	Flagellar hook protein flgE
Shal_1435	SSF53955	Lysozyme-like
Shal_1436	SSF64518	Phase 1 flagellin
Shal_1437	SSF64518	Phase 1 flagellin
Shal_1438	SSF64518	Phase 1 flagellin
Shal_1439	SSF64518	Phase 1 flagellin
Shal_1440	SSF160214	FlaG-like
Shal_1443	SSF101116	Flagellar export chaperone FliS
Shal_1444	SSF46689	Homeodomain-like
Shal_1444	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1445	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_1445	SSF55785	PYP-like sensor domain (PAS domain)
Shal_1445	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_1446	SSF46689	Homeodomain-like
Shal_1446	SSF52172	CheY-like
Shal_1446	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1449	SSF48029	FliG
Shal_1451	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1455	SSF101801	Surface presentation of antigens (SPOA)
Shal_1455	SSF103039	CheC-like
Shal_1456	SSF101801	Surface presentation of antigens (SPOA)
Shal_1461	SSF160544	EscU C-terminal domain-like
Shal_1463	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1464	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1465	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Shal_1465	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Shal_1466	SSF52172	CheY-like
Shal_1467	SSF75708	Chemotaxis phosphatase CheZ
Shal_1468	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Shal_1468	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_1468	SSF50341	CheW-like
Shal_1468	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_1469	SSF52172	CheY-like
Shal_1469	SSF52738	Methylesterase CheB, C-terminal domain
Shal_1471	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1472	SSF50341	CheW-like
Shal_1473	SSF50341	CheW-like
Shal_1475	SSF160544	EscU C-terminal domain-like
Shal_1478	SSF52172	CheY-like
Shal_1479	SSF141571	Pentapeptide repeat-like
Shal_1480	SSF158446	IVS-encoded protein-like
Shal_1481	SSF103473	MFS general substrate transporter
Shal_1482	SSF50104	Translation proteins SH3-like domain
Shal_1482	SSF82679	N-utilization substance G protein NusG, N-terminal domain
Shal_1484	SSF158446	IVS-encoded protein-like
Shal_1486	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_1487	SSF53448	Nucleotide-diphospho-sugar transferases
Shal_1488	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_1489	SSF51182	RmlC-like cupins
Shal_1491	SSF53448	Nucleotide-diphospho-sugar transferases
Shal_1492	SSF54862	4Fe-4S ferredoxins
Shal_1494	SSF53448	Nucleotide-diphospho-sugar transferases
Shal_1496	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Shal_1497	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Shal_1500	SSF56281	Metallo-hydrolase/oxidoreductase
Shal_1501	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Shal_1501	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_1501	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
Shal_1502	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_1503	SSF51182	RmlC-like cupins
Shal_1505	SSF52374	Nucleotidylyl transferase
Shal_1506	SSF53448	Nucleotide-diphospho-sugar transferases
Shal_1508	SSF53448	Nucleotide-diphospho-sugar transferases
Shal_1513	SSF52091	SpoIIaa-like
Shal_1514	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_1515	SSF52172	CheY-like
Shal_1515	SSF81606	PP2C-like
Shal_1516	SSF53850	Periplasmic binding protein-like II
Shal_1517	SSF158472	HAMP domain-like
Shal_1517	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Shal_1517	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_1517	SSF52172	CheY-like
Shal_1517	SSF55785	PYP-like sensor domain (PAS domain)
Shal_1517	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_1518	SSF46689	Homeodomain-like
Shal_1518	SSF52172	CheY-like
Shal_1518	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1519	SSF89550	PHP domain-like
Shal_1520	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_1522	SSF49785	Galactose-binding domain-like
Shal_1522	SSF51445	(Trans)glycosidases
Shal_1522	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
Shal_1523	SSF56655	Carbohydrate phosphatase
Shal_1524	SSF53067	Actin-like ATPase domain
Shal_1528	SSF54862	4Fe-4S ferredoxins
Shal_1529	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_1530	SSF53448	Nucleotide-diphospho-sugar transferases
Shal_1531	SSF56534	Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
Shal_1532	SSF55248	PCD-like
Shal_1533	SSF46689	Homeodomain-like
Shal_1533	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1533	SSF55021	ACT-like
Shal_1533	SSF55785	PYP-like sensor domain (PAS domain)
Shal_1534	SSF56529	FAH
Shal_1535	SSF47616	GST C-terminal domain-like
Shal_1535	SSF52833	Thioredoxin-like
Shal_1536	SSF46785	"Winged helix" DNA-binding domain
Shal_1536	SSF53850	Periplasmic binding protein-like II
Shal_1537	SSF103473	MFS general substrate transporter
Shal_1539	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
Shal_1539	SSF52374	Nucleotidylyl transferase
Shal_1540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1540	SSF90123	ABC transporter transmembrane region
Shal_1541	SSF46689	Homeodomain-like
Shal_1541	SSF48150	DNA-glycosylase
Shal_1541	SSF55945	TATA-box binding protein-like
Shal_1541	SSF57884	Ada DNA repair protein, N-terminal domain (N-Ada 10)
Shal_1542	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
Shal_1542	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
Shal_1543	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1544	SSF52799	(Phosphotyrosine protein) phosphatases II
Shal_1545	SSF56024	Phospholipase D/nuclease
Shal_1546	SSF50341	CheW-like
Shal_1546	SSF52172	CheY-like
Shal_1547	SSF118215	Proton glutamate symport protein
Shal_1550	SSF55120	Pseudouridine synthase
Shal_1553	SSF111337	QueA-like
Shal_1554	SSF51713	tRNA-guanine transglycosylase
Shal_1556	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_1557	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_1559	SSF52821	Rhodanese/Cell cycle control phosphatase
Shal_1560	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_1560	SSF75615	Siroheme synthase middle domains-like
Shal_1561	SSF52980	Restriction endonuclease-like
Shal_1563	SSF52172	CheY-like
Shal_1564	SSF55781	GAF domain-like
Shal_1564	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_1566	SSF141371	PilZ domain-like
Shal_1568	SSF56655	Carbohydrate phosphatase
Shal_1569	SSF75217	alpha/beta knot
Shal_1570	SSF51161	Trimeric LpxA-like enzymes
Shal_1571	SSF46785	"Winged helix" DNA-binding domain
Shal_1572	SSF53383	PLP-dependent transferases
Shal_1573	SSF82649	SufE/NifU
Shal_1574	SSF89360	HesB-like domain
Shal_1575	SSF46565	Chaperone J-domain
Shal_1575	SSF47144	HSC20 (HSCB), C-terminal oligomerisation domain
Shal_1576	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
Shal_1576	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
Shal_1576	SSF53067	Actin-like ATPase domain
Shal_1577	SSF54292	2Fe-2S ferredoxin-like
Shal_1578	SSF140319	IscX-like
Shal_1580	SSF54919	Nucleoside diphosphate kinase, NDK
Shal_1581	SSF56935	Porins
Shal_1583	SSF51395	FMN-linked oxidoreductases
Shal_1585	SSF51658	Xylose isomerase-like
Shal_1589	SSF53271	PRTase-like
Shal_1590	SSF48019	post-AAA+ oligomerization domain-like
Shal_1590	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1591	SSF82607	YbaB-like
Shal_1592	SSF51161	Trimeric LpxA-like enzymes
Shal_1593	SSF81901	HCP-like
Shal_1595	SSF111304	Recombination protein RecR
Shal_1596	SSF110942	HSP90 C-terminal domain
Shal_1596	SSF54211	Ribosomal protein S5 domain 2-like
Shal_1596	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_1597	SSF52833	Thioredoxin-like
Shal_1598	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1599	SSF53800	Chelatase
Shal_1600	SSF53613	Ribokinase-like
Shal_1601	SSF51161	Trimeric LpxA-like enzymes
Shal_1602	SSF118215	Proton glutamate symport protein
Shal_1603	SSF49373	Invasin/intimin cell-adhesion fragments
Shal_1604	SSF55909	Pentein
Shal_1605	SSF56712	Prokaryotic type I DNA topoisomerase
Shal_1605	SSF57783	Zinc beta-ribbon
Shal_1607	SSF46785	"Winged helix" DNA-binding domain
Shal_1607	SSF53850	Periplasmic binding protein-like II
Shal_1608	SSF143548	Serine metabolism enzymes domain
Shal_1609	SSF51445	(Trans)glycosidases
Shal_1610	SSF53474	alpha/beta-Hydrolases
Shal_1611	SSF54975	Acylphosphatase/BLUF domain-like
Shal_1613	SSF141259	CarD-like
Shal_1613	SSF143517	TRCF domain-like
Shal_1613	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1616	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1618	SSF52091	SpoIIaa-like
Shal_1619	SSF53187	Zn-dependent exopeptidases
Shal_1621	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Shal_1622	SSF141523	L,D-transpeptidase catalytic domain-like
Shal_1623	SSF81324	Voltage-gated potassium channels
Shal_1626	SSF88697	PUA domain-like
Shal_1627	SSF46689	Homeodomain-like
Shal_1628	SSF111369	HlyD-like secretion proteins
Shal_1629	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shal_1629	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shal_1629	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_1632	SSF53167	Purine and uridine phosphorylases
Shal_1634	SSF56349	DNA breaking-rejoining enzymes
Shal_1637	SSF54197	HIT-like
Shal_1639	SSF51316	Mss4-like
Shal_1640	SSF52402	Adenine nucleotide alpha hydrolases-like
Shal_1641	SSF118215	Proton glutamate symport protein
Shal_1642	SSF117892	Band 7/SPFH domain
Shal_1643	SSF52096	ClpP/crotonase
Shal_1649	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Shal_1649	SSF54292	2Fe-2S ferredoxin-like
Shal_1649	SSF63380	Riboflavin synthase domain-like
Shal_1653	SSF51366	Ribulose-phoshate binding barrel
Shal_1654	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Shal_1655	SSF51366	Ribulose-phoshate binding barrel
Shal_1656	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Shal_1656	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Shal_1657	SSF52317	Class I glutamine amidotransferase-like
Shal_1658	SSF56322	ADC synthase
Shal_1661	SSF54913	GlnB-like
Shal_1662	SSF54631	CBS-domain pair
Shal_1665	SSF49777	PEBP-like
Shal_1666	SSF52833	Thioredoxin-like
Shal_1667	SSF52317	Class I glutamine amidotransferase-like
Shal_1669	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Shal_1669	SSF54292	2Fe-2S ferredoxin-like
Shal_1669	SSF63380	Riboflavin synthase domain-like
Shal_1671	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Shal_1672	SSF55331	Tautomerase/MIF
Shal_1673	SSF52402	Adenine nucleotide alpha hydrolases-like
Shal_1673	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Shal_1674	SSF52025	PA domain
Shal_1674	SSF53187	Zn-dependent exopeptidases
Shal_1675	SSF56784	HAD-like
Shal_1676	SSF48452	TPR-like
Shal_1676	SSF55073	Nucleotide cyclase
Shal_1677	SSF160935	VPA0735-like
Shal_1678	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_1678	SSF81324	Voltage-gated potassium channels
Shal_1679	SSF53328	Formyltransferase
Shal_1680	SSF55326	PurM N-terminal domain-like
Shal_1680	SSF56042	PurM C-terminal domain-like
Shal_1681	SSF53271	PRTase-like
Shal_1683	SSF52833	Thioredoxin-like
Shal_1684	SSF53098	Ribonuclease H-like
Shal_1685	SSF103088	OmpA-like
Shal_1686	SSF50993	Peptidase/esterase 'gauge' domain
Shal_1686	SSF53474	alpha/beta-Hydrolases
Shal_1687	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_1690	SSF74653	TolA/TonB C-terminal domain
Shal_1691	SSF52964	TolB, N-terminal domain
Shal_1691	SSF69304	Tricorn protease N-terminal domain
Shal_1692	SSF103088	OmpA-like
Shal_1693	SSF48452	TPR-like
Shal_1694	SSF56935	Porins
Shal_1695	SSF52833	Thioredoxin-like
Shal_1696	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1696	SSF57829	Zn-binding ribosomal proteins
Shal_1697	SSF56801	Acetyl-CoA synthetase-like
Shal_1698	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_1698	SSF52172	CheY-like
Shal_1698	SSF55785	PYP-like sensor domain (PAS domain)
Shal_1698	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_1700	SSF51905	FAD/NAD(P)-binding domain
Shal_1701	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_1701	SSF52172	CheY-like
Shal_1702	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_1703	SSF51569	Aldolase
Shal_1705	SSF51621	Phosphoenolpyruvate/pyruvate domain
Shal_1705	SSF52009	Phosphohistidine domain
Shal_1705	SSF56059	Glutathione synthetase ATP-binding domain-like
Shal_1706	SSF46548	alpha-helical ferredoxin
Shal_1706	SSF55103	FAD-linked oxidases, C-terminal domain
Shal_1706	SSF56176	FAD-binding/transporter-associated domain-like
Shal_1708	SSF46785	"Winged helix" DNA-binding domain
Shal_1711	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_1711	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Shal_1713	SSF48557	L-aspartase-like
Shal_1714	SSF101322	YcfC-like
Shal_1715	SSF52402	Adenine nucleotide alpha hydrolases-like
Shal_1716	SSF55811	Nudix
Shal_1717	SSF55120	Pseudouridine synthase
Shal_1718	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Shal_1719	SSF50249	Nucleic acid-binding proteins
Shal_1720	SSF54736	ClpS-like
Shal_1721	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1721	SSF81923	Double Clp-N motif
Shal_1722	SSF50249	Nucleic acid-binding proteins
Shal_1723	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_1724	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_1726	SSF46785	"Winged helix" DNA-binding domain
Shal_1726	SSF53383	PLP-dependent transferases
Shal_1728	SSF47616	GST C-terminal domain-like
Shal_1728	SSF52833	Thioredoxin-like
Shal_1729	SSF53067	Actin-like ATPase domain
Shal_1731	SSF54523	Pili subunits
Shal_1732	SSF53383	PLP-dependent transferases
Shal_1733	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_1733	SSF49344	CBD9-like
Shal_1733	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_1734	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_1734	SSF52172	CheY-like
Shal_1735	SSF103088	OmpA-like
Shal_1736	SSF53300	vWA-like
Shal_1737	SSF63817	Sortase
Shal_1738	SSF55073	Nucleotide cyclase
Shal_1741	SSF50249	Nucleic acid-binding proteins
Shal_1741	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
Shal_1742	SSF55469	FMN-dependent nitroreductase-like
Shal_1744	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1744	SSF52980	Restriction endonuclease-like
Shal_1749	SSF56925	OMPA-like
Shal_1752	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1753	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1754	SSF48403	Ankyrin repeat
Shal_1756	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1761	SSF52788	Phosphotyrosine protein phosphatases I
Shal_1762	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1763	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1764	SSF51197	Clavaminate synthase-like
Shal_1765	SSF51316	Mss4-like
Shal_1765	SSF55068	Peptide methionine sulfoxide reductase
Shal_1766	SSF52091	SpoIIaa-like
Shal_1767	SSF50249	Nucleic acid-binding proteins
Shal_1768	SSF55120	Pseudouridine synthase
Shal_1768	SSF55174	Alpha-L RNA-binding motif
Shal_1769	SSF56784	HAD-like
Shal_1771	SSF52972	ITPase-like
Shal_1773	SSF57829	Zn-binding ribosomal proteins
Shal_1774	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Shal_1775	SSF53901	Thiolase-like
Shal_1776	SSF52151	FabD/lysophospholipase-like
Shal_1776	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
Shal_1777	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_1778	SSF47336	ACP-like
Shal_1779	SSF53901	Thiolase-like
Shal_1781	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_1782	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Shal_1782	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_1783	SSF53927	Cytidine deaminase-like
Shal_1784	SSF53098	Ribonuclease H-like
Shal_1785	SSF56349	DNA breaking-rejoining enzymes
Shal_1787	SSF101386	all-alpha NTP pyrophosphatases
Shal_1788	SSF88697	PUA domain-like
Shal_1790	SSF46689	Homeodomain-like
Shal_1790	SSF53041	Resolvase-like
Shal_1792	SSF69572	Activating enzymes of the ubiquitin-like proteins
Shal_1793	SSF102712	JAB1/MPN domain
Shal_1796	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_1797	SSF50249	Nucleic acid-binding proteins
Shal_1799	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1801	SSF46785	"Winged helix" DNA-binding domain
Shal_1803	SSF51419	PLP-binding barrel
Shal_1804	SSF56276	S-adenosylmethionine decarboxylase
Shal_1805	SSF52768	Arginase/deacetylase
Shal_1806	SSF50475	FMN-binding split barrel
Shal_1807	SSF101874	YceI-like
Shal_1809	SSF50630	Acid proteases
Shal_1810	SSF55785	PYP-like sensor domain (PAS domain)
Shal_1810	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_1811	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shal_1812	SSF46589	tRNA-binding arm
Shal_1812	SSF55681	Class II aaRS and biotin synthetases
Shal_1813	SSF46955	Putative DNA-binding domain
Shal_1813	SSF50249	Nucleic acid-binding proteins
Shal_1813	SSF54991	Anticodon-binding domain of PheRS
Shal_1813	SSF55681	Class II aaRS and biotin synthetases
Shal_1813	SSF56037	PheT/TilS domain
Shal_1814	SSF47729	IHF-like DNA-binding proteins
Shal_1815	SSF50494	Trypsin-like serine proteases
Shal_1816	SSF56104	SAICAR synthase-like
Shal_1817	SSF101386	all-alpha NTP pyrophosphatases
Shal_1817	SSF141734	HisI-like
Shal_1818	SSF51366	Ribulose-phoshate binding barrel
Shal_1819	SSF51366	Ribulose-phoshate binding barrel
Shal_1820	SSF52317	Class I glutamine amidotransferase-like
Shal_1821	SSF54211	Ribosomal protein S5 domain 2-like
Shal_1821	SSF56784	HAD-like
Shal_1822	SSF53383	PLP-dependent transferases
Shal_1823	SSF53720	ALDH-like
Shal_1824	SSF53850	Periplasmic binding protein-like II
Shal_1824	SSF54913	GlnB-like
Shal_1825	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1827	SSF53067	Actin-like ATPase domain
Shal_1830	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_1831	SSF53474	alpha/beta-Hydrolases
Shal_1832	SSF56801	Acetyl-CoA synthetase-like
Shal_1833	SSF47819	HRDC-like
Shal_1833	SSF53098	Ribonuclease H-like
Shal_1834	SSF55229	Cell division protein MinE topological specificity domain
Shal_1835	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1836	SSF63848	Cell-division inhibitor MinC, C-terminal domain
Shal_1837	SSF160191	YcgL-like
Shal_1838	SSF53955	Lysozyme-like
Shal_1840	SSF158442	DsbB-like
Shal_1842	SSF46785	"Winged helix" DNA-binding domain
Shal_1842	SSF48008	GntR ligand-binding domain-like
Shal_1845	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Shal_1847	SSF53271	PRTase-like
Shal_1848	SSF54631	CBS-domain pair
Shal_1849	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Shal_1850	SSF55073	Nucleotide cyclase
Shal_1851	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1852	SSF53850	Periplasmic binding protein-like II
Shal_1853	SSF53850	Periplasmic binding protein-like II
Shal_1854	SSF52440	PreATP-grasp domain
Shal_1854	SSF56059	Glutathione synthetase ATP-binding domain-like
Shal_1855	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1856	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1856	SSF52980	Restriction endonuclease-like
Shal_1857	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1857	SSF52980	Restriction endonuclease-like
Shal_1858	SSF54001	Cysteine proteinases
Shal_1860	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1861	SSF141868	EAL domain-like
Shal_1862	SSF48435	Bacterial muramidases
Shal_1862	SSF53955	Lysozyme-like
Shal_1864	SSF56524	Oxidoreductase molybdopterin-binding domain
Shal_1867	SSF89562	RraA-like
Shal_1870	SSF53955	Lysozyme-like
Shal_1870	SSF54106	LysM domain
Shal_1871	SSF56281	Metallo-hydrolase/oxidoreductase
Shal_1872	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_1873	SSF46785	"Winged helix" DNA-binding domain
Shal_1873	SSF53850	Periplasmic binding protein-like II
Shal_1874	SSF53098	Ribonuclease H-like
Shal_1875	SSF53098	Ribonuclease H-like
Shal_1877	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_1879	SSF143422	Transposase IS200-like
Shal_1880	SSF46689	Homeodomain-like
Shal_1880	SSF53098	Ribonuclease H-like
Shal_1884	SSF56796	Dehydroquinate synthase-like
Shal_1885	SSF46785	"Winged helix" DNA-binding domain
Shal_1886	SSF53649	Alkaline phosphatase-like
Shal_1887	SSF102114	Radical SAM enzymes
Shal_1888	SSF48113	Heme-dependent peroxidases
Shal_1890	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Shal_1890	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Shal_1891	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Shal_1893	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
Shal_1895	SSF103473	MFS general substrate transporter
Shal_1896	SSF56420	Peptide deformylase
Shal_1901	SSF51391	Thiamin phosphate synthase
Shal_1901	SSF53613	Ribokinase-like
Shal_1902	SSF69572	Activating enzymes of the ubiquitin-like proteins
Shal_1903	SSF54285	MoaD/ThiS
Shal_1904	SSF110399	ThiG-like
Shal_1905	SSF102114	Radical SAM enzymes
Shal_1907	SSF52172	CheY-like
Shal_1909	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_1909	SSF52172	CheY-like
Shal_1909	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_1911	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shal_1912	SSF56059	Glutathione synthetase ATP-binding domain-like
Shal_1914	SSF50630	Acid proteases
Shal_1915	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_1916	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_1917	SSF53850	Periplasmic binding protein-like II
Shal_1917	SSF55073	Nucleotide cyclase
Shal_1918	SSF50249	Nucleic acid-binding proteins
Shal_1918	SSF55261	GAD domain-like
Shal_1918	SSF55681	Class II aaRS and biotin synthetases
Shal_1919	SSF75625	YebC-like
Shal_1920	SSF53098	Ribonuclease H-like
Shal_1921	SSF46929	DNA helicase RuvA subunit, C-terminal domain
Shal_1921	SSF47781	RuvA domain 2-like
Shal_1921	SSF50249	Nucleic acid-binding proteins
Shal_1922	SSF46785	"Winged helix" DNA-binding domain
Shal_1922	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1923	SSF56935	Porins
Shal_1924	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Shal_1925	SSF48150	DNA-glycosylase
Shal_1929	SSF142019	Nqo1 FMN-binding domain-like
Shal_1929	SSF46548	alpha-helical ferredoxin
Shal_1930	SSF54862	4Fe-4S ferredoxins
Shal_1932	SSF141868	EAL domain-like
Shal_1932	SSF55073	Nucleotide cyclase
Shal_1933	SSF46600	C-terminal UvrC-binding domain of UvrB
Shal_1933	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_1934	SSF144091	Rhomboid-like
Shal_1935	SSF52402	Adenine nucleotide alpha hydrolases-like
Shal_1936	SSF102114	Radical SAM enzymes
Shal_1937	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Shal_1940	SSF141868	EAL domain-like
Shal_1940	SSF55073	Nucleotide cyclase
Shal_1940	SSF55781	GAF domain-like
Shal_1940	SSF55785	PYP-like sensor domain (PAS domain)
Shal_1941	SSF103642	Sec-C motif
Shal_1941	SSF54427	NTF2-like
Shal_1942	SSF54427	NTF2-like
Shal_1943	SSF160443	SMR domain-like
Shal_1945	SSF46689	Homeodomain-like
Shal_1945	SSF48498	Tetracyclin repressor-like, C-terminal domain
Shal_1946	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Shal_1946	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Shal_1947	SSF50800	PK beta-barrel domain-like
Shal_1947	SSF51621	Phosphoenolpyruvate/pyruvate domain
Shal_1947	SSF52935	PK C-terminal domain-like
Shal_1948	SSF46689	Homeodomain-like
Shal_1948	SSF53697	SIS domain
Shal_1949	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_1949	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Shal_1950	SSF100950	NagB/RpiA/CoA transferase-like
Shal_1951	SSF143975	IlvD/EDD N-terminal domain-like
Shal_1951	SSF52016	LeuD/IlvD-like
Shal_1952	SSF51569	Aldolase
Shal_1953	SSF49772	Ecotin, trypsin inhibitor
Shal_1954	SSF161111	Cation efflux protein transmembrane domain-like
Shal_1955	SSF46785	"Winged helix" DNA-binding domain
Shal_1956	SSF53649	Alkaline phosphatase-like
Shal_1957	SSF55073	Nucleotide cyclase
Shal_1958	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_1958	SSF52210	Succinyl-CoA synthetase domains
Shal_1958	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_1958	SSF56059	Glutathione synthetase ATP-binding domain-like
Shal_1960	SSF46785	"Winged helix" DNA-binding domain
Shal_1960	SSF48008	GntR ligand-binding domain-like
Shal_1961	SSF51621	Phosphoenolpyruvate/pyruvate domain
Shal_1962	SSF48256	Citrate synthase
Shal_1963	SSF52016	LeuD/IlvD-like
Shal_1963	SSF53732	Aconitase iron-sulfur domain
Shal_1964	SSF54506	Diaminopimelate epimerase-like
Shal_1966	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_1968	SSF49299	PKD domain
Shal_1969	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_1970	SSF143422	Transposase IS200-like
Shal_1971	SSF55166	Hedgehog/DD-peptidase
Shal_1972	SSF47473	EF-hand
Shal_1973	SSF46689	Homeodomain-like
Shal_1974	SSF111369	HlyD-like secretion proteins
Shal_1975	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shal_1975	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shal_1975	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_1976	SSF53300	vWA-like
Shal_1977	SSF46955	Putative DNA-binding domain
Shal_1979	SSF52743	Subtilisin-like
Shal_1980	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_1980	SSF52172	CheY-like
Shal_1981	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_1981	SSF63829	Calcium-dependent phosphotriesterase
Shal_1983	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shal_1984	SSF47616	GST C-terminal domain-like
Shal_1984	SSF52833	Thioredoxin-like
Shal_1985	SSF52218	Flavoproteins
Shal_1987	SSF53474	alpha/beta-Hydrolases
Shal_1988	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_1989	SSF47473	EF-hand
Shal_1991	SSF52440	PreATP-grasp domain
Shal_1991	SSF56059	Glutathione synthetase ATP-binding domain-like
Shal_1999	SSF143422	Transposase IS200-like
Shal_2001	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2003	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2004	SSF56931	Outer membrane phospholipase A (OMPLA)
Shal_2005	SSF51161	Trimeric LpxA-like enzymes
Shal_2006	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2007	SSF47413	lambda repressor-like DNA-binding domains
Shal_2007	SSF53822	Periplasmic binding protein-like I
Shal_2008	SSF50129	GroES-like
Shal_2008	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2009	SSF53067	Actin-like ATPase domain
Shal_2010	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2012	SSF53822	Periplasmic binding protein-like I
Shal_2013	SSF51182	RmlC-like cupins
Shal_2017	SSF63380	Riboflavin synthase domain-like
Shal_2019	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2020	SSF52954	Class II aaRS ABD-related
Shal_2020	SSF55186	ThrRS/AlaRS common domain
Shal_2020	SSF55681	Class II aaRS and biotin synthetases
Shal_2020	SSF81271	TGS-like
Shal_2021	SSF54364	Translation initiation factor IF3, N-terminal domain
Shal_2021	SSF55200	Translation initiation factor IF3, C-terminal domain
Shal_2022	SSF143034	L35p-like
Shal_2023	SSF74731	Ribosomal protein L20
Shal_2024	SSF51905	FAD/NAD(P)-binding domain
Shal_2025	SSF53187	Zn-dependent exopeptidases
Shal_2028	SSF53774	Glutaminase/Asparaginase
Shal_2029	SSF52096	ClpP/crotonase
Shal_2030	SSF51395	FMN-linked oxidoreductases
Shal_2030	SSF51905	FAD/NAD(P)-binding domain
Shal_2030	SSF51971	Nucleotide-binding domain
Shal_2032	SSF101756	Hypothetical protein YgiW
Shal_2034	SSF54292	2Fe-2S ferredoxin-like
Shal_2035	SSF47240	Ferritin-like
Shal_2036	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
Shal_2036	SSF51998	PFL-like glycyl radical enzymes
Shal_2037	SSF56784	HAD-like
Shal_2038	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_2039	SSF101904	GyrA/ParC C-terminal domain-like
Shal_2039	SSF56719	Type II DNA topoisomerase
Shal_2040	SSF56601	beta-lactamase/transpeptidase-like
Shal_2041	SSF53383	PLP-dependent transferases
Shal_2042	SSF53383	PLP-dependent transferases
Shal_2043	SSF55205	EPT/RTPC-like
Shal_2044	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2045	SSF50249	Nucleic acid-binding proteins
Shal_2046	SSF47729	IHF-like DNA-binding proteins
Shal_2048	SSF48452	TPR-like
Shal_2049	SSF51366	Ribulose-phoshate binding barrel
Shal_2050	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2053	SSF143865	CorA soluble domain-like
Shal_2053	SSF144083	Magnesium transport protein CorA, transmembrane region
Shal_2054	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Shal_2054	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Shal_2055	SSF56601	beta-lactamase/transpeptidase-like
Shal_2057	SSF55331	Tautomerase/MIF
Shal_2058	SSF56024	Phospholipase D/nuclease
Shal_2061	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_2061	SSF52172	CheY-like
Shal_2062	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_2062	SSF53850	Periplasmic binding protein-like II
Shal_2062	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_2063	SSF143631	ApbE-like
Shal_2065	SSF56935	Porins
Shal_2066	SSF55120	Pseudouridine synthase
Shal_2067	SSF47823	lambda integrase-like, N-terminal domain
Shal_2067	SSF56349	DNA breaking-rejoining enzymes
Shal_2069	SSF56112	Protein kinase-like (PK-like)
Shal_2071	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2072	SSF50630	Acid proteases
Shal_2072	SSF56059	Glutathione synthetase ATP-binding domain-like
Shal_2076	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2076	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Shal_2078	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2078	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Shal_2079	SSF69721	DsrC, the gamma subunit of dissimilatory sulfite reductase
Shal_2080	SSF75169	DsrEFH-like
Shal_2081	SSF75169	DsrEFH-like
Shal_2082	SSF75169	DsrEFH-like
Shal_2084	SSF46785	"Winged helix" DNA-binding domain
Shal_2084	SSF53850	Periplasmic binding protein-like II
Shal_2085	SSF103473	MFS general substrate transporter
Shal_2086	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2087	SSF103473	MFS general substrate transporter
Shal_2088	SSF51569	Aldolase
Shal_2088	SSF89000	post-HMGL domain-like
Shal_2089	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2089	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Shal_2090	SSF56529	FAH
Shal_2091	SSF46785	"Winged helix" DNA-binding domain
Shal_2091	SSF50475	FMN-binding split barrel
Shal_2092	SSF53720	ALDH-like
Shal_2093	SSF50022	ISP domain
Shal_2093	SSF55961	Bet v1-like
Shal_2094	SSF103473	MFS general substrate transporter
Shal_2095	SSF56281	Metallo-hydrolase/oxidoreductase
Shal_2096	SSF56801	Acetyl-CoA synthetase-like
Shal_2097	SSF51905	FAD/NAD(P)-binding domain
Shal_2097	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Shal_2098	SSF56801	Acetyl-CoA synthetase-like
Shal_2099	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_2100	SSF50939	Sialidases
Shal_2101	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Shal_2101	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Shal_2102	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Shal_2102	SSF54292	2Fe-2S ferredoxin-like
Shal_2102	SSF63380	Riboflavin synthase domain-like
Shal_2103	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2104	SSF51395	FMN-linked oxidoreductases
Shal_2105	SSF52402	Adenine nucleotide alpha hydrolases-like
Shal_2106	SSF52402	Adenine nucleotide alpha hydrolases-like
Shal_2106	SSF52467	DHS-like NAD/FAD-binding domain
Shal_2107	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_2108	SSF52096	ClpP/crotonase
Shal_2109	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2110	SSF50249	Nucleic acid-binding proteins
Shal_2110	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_2111	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Shal_2111	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Shal_2112	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_2113	SSF53901	Thiolase-like
Shal_2114	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Shal_2114	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Shal_2115	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Shal_2115	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Shal_2116	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Shal_2116	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Shal_2117	SSF51395	FMN-linked oxidoreductases
Shal_2117	SSF51905	FAD/NAD(P)-binding domain
Shal_2118	SSF53474	alpha/beta-Hydrolases
Shal_2119	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2120	SSF54427	NTF2-like
Shal_2121	SSF56801	Acetyl-CoA synthetase-like
Shal_2122	SSF53901	Thiolase-like
Shal_2123	SSF50249	Nucleic acid-binding proteins
Shal_2123	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_2124	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Shal_2125	SSF100950	NagB/RpiA/CoA transferase-like
Shal_2126	SSF100950	NagB/RpiA/CoA transferase-like
Shal_2127	SSF52096	ClpP/crotonase
Shal_2128	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
Shal_2129	SSF52096	ClpP/crotonase
Shal_2130	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Shal_2130	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Shal_2131	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Shal_2131	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Shal_2132	SSF53901	Thiolase-like
Shal_2133	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2134	SSF75304	Amidase signature (AS) enzymes
Shal_2137	SSF56935	Porins
Shal_2139	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2140	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_2141	SSF53901	Thiolase-like
Shal_2142	SSF52096	ClpP/crotonase
Shal_2143	SSF51905	FAD/NAD(P)-binding domain
Shal_2143	SSF54373	FAD-linked reductases, C-terminal domain
Shal_2143	SSF54862	4Fe-4S ferredoxins
Shal_2144	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2145	SSF54427	NTF2-like
Shal_2146	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Shal_2146	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Shal_2147	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Shal_2147	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Shal_2148	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shal_2148	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shal_2148	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_2149	SSF111369	HlyD-like secretion proteins
Shal_2150	SSF103642	Sec-C motif
Shal_2151	SSF64182	DHH phosphoesterases
Shal_2152	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2152	SSF54211	Ribosomal protein S5 domain 2-like
Shal_2153	SSF46626	Cytochrome c
Shal_2153	SSF50692	ADC-like
Shal_2153	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shal_2155	SSF52821	Rhodanese/Cell cycle control phosphatase
Shal_2157	SSF52833	Thioredoxin-like
Shal_2158	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_2159	SSF56281	Metallo-hydrolase/oxidoreductase
Shal_2160	SSF51338	Composite domain of metallo-dependent hydrolases
Shal_2160	SSF51556	Metallo-dependent hydrolases
Shal_2163	SSF103473	MFS general substrate transporter
Shal_2164	SSF111369	HlyD-like secretion proteins
Shal_2166	SSF111369	HlyD-like secretion proteins
Shal_2167	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shal_2167	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shal_2167	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_2168	SSF56954	Outer membrane efflux proteins (OEP)
Shal_2169	SSF56672	DNA/RNA polymerases
Shal_2170	SSF51306	LexA/Signal peptidase
Shal_2171	SSF55073	Nucleotide cyclase
Shal_2172	SSF54427	NTF2-like
Shal_2173	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Shal_2176	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2181	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2182	SSF54060	His-Me finger endonucleases
Shal_2183	SSF56672	DNA/RNA polymerases
Shal_2184	SSF51306	LexA/Signal peptidase
Shal_2185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2191	SSF56349	DNA breaking-rejoining enzymes
Shal_2192	SSF56349	DNA breaking-rejoining enzymes
Shal_2193	SSF56349	DNA breaking-rejoining enzymes
Shal_2194	SSF56349	DNA breaking-rejoining enzymes
Shal_2197	SSF81442	Cytochrome c oxidase subunit I-like
Shal_2198	SSF46626	Cytochrome c
Shal_2200	SSF46626	Cytochrome c
Shal_2202	SSF55008	HMA, heavy metal-associated domain
Shal_2202	SSF56784	HAD-like
Shal_2202	SSF81653	Calcium ATPase, transduction domain A
Shal_2202	SSF81665	Calcium ATPase, transmembrane domain M
Shal_2205	SSF46785	"Winged helix" DNA-binding domain
Shal_2205	SSF51206	cAMP-binding domain-like
Shal_2206	SSF52402	Adenine nucleotide alpha hydrolases-like
Shal_2207	SSF52402	Adenine nucleotide alpha hydrolases-like
Shal_2210	SSF142338	CofD-like
Shal_2212	SSF53383	PLP-dependent transferases
Shal_2213	SSF46589	tRNA-binding arm
Shal_2213	SSF55681	Class II aaRS and biotin synthetases
Shal_2215	SSF48019	post-AAA+ oligomerization domain-like
Shal_2215	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2216	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
Shal_2217	SSF46785	"Winged helix" DNA-binding domain
Shal_2217	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2218	SSF46785	"Winged helix" DNA-binding domain
Shal_2218	SSF54909	Dimeric alpha+beta barrel
Shal_2219	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2219	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Shal_2220	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_2220	SSF52172	CheY-like
Shal_2222	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2223	SSF56219	DNase I-like
Shal_2224	SSF56024	Phospholipase D/nuclease
Shal_2226	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
Shal_2226	SSF56300	Metallo-dependent phosphatases
Shal_2227	SSF54060	His-Me finger endonucleases
Shal_2228	SSF56219	DNase I-like
Shal_2229	SSF56935	Porins
Shal_2230	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shal_2231	SSF142754	NadA-like
Shal_2232	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
Shal_2232	SSF51230	Single hybrid motif
Shal_2232	SSF52777	CoA-dependent acyltransferases
Shal_2233	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Shal_2233	SSF52922	TK C-terminal domain-like
Shal_2234	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Shal_2235	SSF53187	Zn-dependent exopeptidases
Shal_2236	SSF55068	Peptide methionine sulfoxide reductase
Shal_2238	SSF53738	Phosphoglucomutase, first 3 domains
Shal_2238	SSF55957	Phosphoglucomutase, C-terminal domain
Shal_2239	SSF47598	Ribbon-helix-helix
Shal_2239	SSF82808	Replication modulator SeqA, C-terminal DNA-binding domain
Shal_2240	SSF53474	alpha/beta-Hydrolases
Shal_2243	SSF52218	Flavoproteins
Shal_2245	SSF50104	Translation proteins SH3-like domain
Shal_2245	SSF50249	Nucleic acid-binding proteins
Shal_2246	SSF53383	PLP-dependent transferases
Shal_2247	SSF109604	HD-domain/PDEase-like
Shal_2248	SSF109604	HD-domain/PDEase-like
Shal_2250	SSF53720	ALDH-like
Shal_2250	SSF56796	Dehydroquinate synthase-like
Shal_2251	SSF51645	Malate synthase G
Shal_2252	SSF46785	"Winged helix" DNA-binding domain
Shal_2252	SSF53850	Periplasmic binding protein-like II
Shal_2253	SSF51621	Phosphoenolpyruvate/pyruvate domain
Shal_2254	SSF54523	Pili subunits
Shal_2255	SSF53474	alpha/beta-Hydrolases
Shal_2255	SSF82171	DPP6 N-terminal domain-like
Shal_2256	SSF117457	FumA C-terminal domain-like
Shal_2257	SSF56322	ADC synthase
Shal_2258	SSF55811	Nudix
Shal_2260	SSF50249	Nucleic acid-binding proteins
Shal_2260	SSF55681	Class II aaRS and biotin synthetases
Shal_2261	SSF56770	HydA/Nqo6-like
Shal_2262	SSF56762	HydB/Nqo4-like
Shal_2263	SSF81342	Transmembrane di-heme cytochromes
Shal_2264	SSF53163	HybD-like
Shal_2266	SSF54975	Acylphosphatase/BLUF domain-like
Shal_2266	SSF55821	YrdC/RibB
Shal_2267	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2268	SSF159127	HupF/HypC-like
Shal_2270	SSF55326	PurM N-terminal domain-like
Shal_2270	SSF56042	PurM C-terminal domain-like
Shal_2272	SSF48452	TPR-like
Shal_2275	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2276	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2283	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2286	SSF46689	Homeodomain-like
Shal_2287	SSF141523	L,D-transpeptidase catalytic domain-like
Shal_2287	SSF47090	PGBD-like
Shal_2288	SSF53649	Alkaline phosphatase-like
Shal_2290	SSF53448	Nucleotide-diphospho-sugar transferases
Shal_2291	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_2293	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Shal_2295	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_2296	SSF51645	Malate synthase G
Shal_2297	SSF47413	lambda repressor-like DNA-binding domains
Shal_2299	SSF54534	FKBP-like
Shal_2301	SSF51197	Clavaminate synthase-like
Shal_2302	SSF53098	Ribonuclease H-like
Shal_2303	SSF103039	CheC-like
Shal_2304	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shal_2305	SSF55021	ACT-like
Shal_2306	SSF55594	HPr-like
Shal_2307	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
Shal_2307	SSF51621	Phosphoenolpyruvate/pyruvate domain
Shal_2307	SSF52009	Phosphohistidine domain
Shal_2308	SSF51261	Duplicated hybrid motif
Shal_2309	SSF52833	Thioredoxin-like
Shal_2310	SSF53187	Zn-dependent exopeptidases
Shal_2310	SSF55031	Bacterial exopeptidase dimerisation domain
Shal_2311	SSF55166	Hedgehog/DD-peptidase
Shal_2312	SSF53474	alpha/beta-Hydrolases
Shal_2313	SSF53056	beta-carbonic anhydrase, cab
Shal_2314	SSF53383	PLP-dependent transferases
Shal_2315	SSF56796	Dehydroquinate synthase-like
Shal_2316	SSF53448	Nucleotide-diphospho-sugar transferases
Shal_2318	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shal_2318	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shal_2318	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_2319	SSF111369	HlyD-like secretion proteins
Shal_2321	SSF51569	Aldolase
Shal_2322	SSF55021	ACT-like
Shal_2323	SSF52833	Thioredoxin-like
Shal_2325	SSF46785	"Winged helix" DNA-binding domain
Shal_2325	SSF53850	Periplasmic binding protein-like II
Shal_2327	SSF64307	SirA-like
Shal_2328	SSF48452	TPR-like
Shal_2329	SSF52833	Thioredoxin-like
Shal_2332	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2335	SSF52833	Thioredoxin-like
Shal_2336	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
Shal_2336	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
Shal_2337	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2340	SSF50715	Ribosomal protein L25-like
Shal_2341	SSF55166	Hedgehog/DD-peptidase
Shal_2342	SSF141523	L,D-transpeptidase catalytic domain-like
Shal_2342	SSF47090	PGBD-like
Shal_2343	SSF54523	Pili subunits
Shal_2345	SSF46600	C-terminal UvrC-binding domain of UvrB
Shal_2345	SSF47781	RuvA domain 2-like
Shal_2345	SSF82771	GIY-YIG endonuclease
Shal_2346	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_2346	SSF52172	CheY-like
Shal_2347	SSF54211	Ribosomal protein S5 domain 2-like
Shal_2348	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_2351	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2352	SSF52833	Thioredoxin-like
Shal_2353	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_2354	SSF50891	Cyclophilin-like
Shal_2356	SSF51395	FMN-linked oxidoreductases
Shal_2357	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2357	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Shal_2358	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_2359	SSF50939	Sialidases
Shal_2363	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shal_2363	SSF63737	Leukotriene A4 hydrolase N-terminal domain
Shal_2364	SSF50156	PDZ domain-like
Shal_2364	SSF52096	ClpP/crotonase
Shal_2365	SSF48657	FinO-like
Shal_2366	SSF55781	GAF domain-like
Shal_2372	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_2373	SSF51556	Metallo-dependent hydrolases
Shal_2375	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2376	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2378	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
Shal_2379	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2380	SSF117916	Fe-S cluster assembly (FSCA) domain-like
Shal_2380	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2381	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Shal_2381	SSF50249	Nucleic acid-binding proteins
Shal_2381	SSF52374	Nucleotidylyl transferase
Shal_2381	SSF57770	Methionyl-tRNA synthetase (MetRS), Zn-domain
Shal_2382	SSF102705	NIF3 (NGG1p interacting factor 3)-like
Shal_2386	SSF103473	MFS general substrate transporter
Shal_2387	SSF52467	DHS-like NAD/FAD-binding domain
Shal_2387	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Shal_2388	SSF55021	ACT-like
Shal_2389	SSF49764	HSP20-like chaperones
Shal_2390	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
Shal_2390	SSF56300	Metallo-dependent phosphatases
Shal_2391	SSF53474	alpha/beta-Hydrolases
Shal_2392	SSF47616	GST C-terminal domain-like
Shal_2392	SSF52833	Thioredoxin-like
Shal_2394	SSF54534	FKBP-like
Shal_2395	SSF47090	PGBD-like
Shal_2395	SSF53955	Lysozyme-like
Shal_2398	SSF50341	CheW-like
Shal_2398	SSF52172	CheY-like
Shal_2399	SSF50182	Sm-like ribonucleoproteins
Shal_2399	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
Shal_2399	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
Shal_2401	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Shal_2403	SSF53474	alpha/beta-Hydrolases
Shal_2404	SSF53850	Periplasmic binding protein-like II
Shal_2406	SSF46626	Cytochrome c
Shal_2408	SSF46785	"Winged helix" DNA-binding domain
Shal_2408	SSF53850	Periplasmic binding protein-like II
Shal_2409	SSF51182	RmlC-like cupins
Shal_2410	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Shal_2411	SSF55073	Nucleotide cyclase
Shal_2411	SSF55785	PYP-like sensor domain (PAS domain)
Shal_2414	SSF143422	Transposase IS200-like
Shal_2415	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Shal_2416	SSF52799	(Phosphotyrosine protein) phosphatases II
Shal_2420	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Shal_2421	SSF53590	Nucleoside hydrolase
Shal_2422	SSF103473	MFS general substrate transporter
Shal_2424	SSF53822	Periplasmic binding protein-like I
Shal_2425	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2427	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2427	SSF56327	LDH C-terminal domain-like
Shal_2428	SSF55785	PYP-like sensor domain (PAS domain)
Shal_2428	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shal_2429	SSF53187	Zn-dependent exopeptidases
Shal_2429	SSF55031	Bacterial exopeptidase dimerisation domain
Shal_2430	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shal_2432	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_2433	SSF56784	HAD-like
Shal_2434	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Shal_2434	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Shal_2435	SSF74650	Galactose mutarotase-like
Shal_2446	SSF81324	Voltage-gated potassium channels
Shal_2449	SSF111369	HlyD-like secretion proteins
Shal_2451	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2454	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_2455	SSF55469	FMN-dependent nitroreductase-like
Shal_2457	SSF56399	ADP-ribosylation
Shal_2458	SSF56112	Protein kinase-like (PK-like)
Shal_2460	SSF89957	MTH1187/YkoF-like
Shal_2461	SSF56935	Porins
Shal_2463	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_2464	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_2465	SSF54197	HIT-like
Shal_2466	SSF46689	Homeodomain-like
Shal_2469	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_2470	SSF48452	TPR-like
Shal_2472	SSF48695	Multiheme cytochromes
Shal_2474	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2475	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_2476	SSF53383	PLP-dependent transferases
Shal_2477	SSF102114	Radical SAM enzymes
Shal_2478	SSF53383	PLP-dependent transferases
Shal_2479	SSF50447	Translation proteins
Shal_2479	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2479	SSF54211	Ribosomal protein S5 domain 2-like
Shal_2479	SSF54980	EF-G C-terminal domain-like
Shal_2480	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2481	SSF52467	DHS-like NAD/FAD-binding domain
Shal_2482	SSF46785	"Winged helix" DNA-binding domain
Shal_2483	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_2484	SSF51395	FMN-linked oxidoreductases
Shal_2486	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2486	SSF52210	Succinyl-CoA synthetase domains
Shal_2487	SSF52210	Succinyl-CoA synthetase domains
Shal_2487	SSF56059	Glutathione synthetase ATP-binding domain-like
Shal_2488	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
Shal_2488	SSF51230	Single hybrid motif
Shal_2488	SSF52777	CoA-dependent acyltransferases
Shal_2489	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Shal_2490	SSF46548	alpha-helical ferredoxin
Shal_2490	SSF54292	2Fe-2S ferredoxin-like
Shal_2491	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
Shal_2491	SSF51905	FAD/NAD(P)-binding domain
Shal_2491	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Shal_2492	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
Shal_2493	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
Shal_2494	SSF48256	Citrate synthase
Shal_2495	SSF111369	HlyD-like secretion proteins
Shal_2496	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shal_2496	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shal_2496	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_2497	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shal_2497	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shal_2497	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_2500	SSF46689	Homeodomain-like
Shal_2500	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2501	SSF52833	Thioredoxin-like
Shal_2503	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shal_2504	SSF158997	Trm112p-like
Shal_2505	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2506	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2506	SSF90123	ABC transporter transmembrane region
Shal_2507	SSF56281	Metallo-hydrolase/oxidoreductase
Shal_2509	SSF51261	Duplicated hybrid motif
Shal_2510	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Shal_2512	SSF158651	YejL-like
Shal_2513	SSF53649	Alkaline phosphatase-like
Shal_2514	SSF48695	Multiheme cytochromes
Shal_2515	SSF55073	Nucleotide cyclase
Shal_2516	SSF53474	alpha/beta-Hydrolases
Shal_2517	SSF52402	Adenine nucleotide alpha hydrolases-like
Shal_2519	SSF46689	Homeodomain-like
Shal_2519	SSF52172	CheY-like
Shal_2519	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2520	SSF158472	HAMP domain-like
Shal_2520	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_2520	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_2522	SSF141868	EAL domain-like
Shal_2523	SSF49785	Galactose-binding domain-like
Shal_2524	SSF53474	alpha/beta-Hydrolases
Shal_2526	SSF102114	Radical SAM enzymes
Shal_2528	SSF161098	MetI-like
Shal_2529	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2530	SSF53850	Periplasmic binding protein-like II
Shal_2531	SSF52172	CheY-like
Shal_2532	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_2534	SSF46785	"Winged helix" DNA-binding domain
Shal_2534	SSF53850	Periplasmic binding protein-like II
Shal_2535	SSF55718	SCP-like
Shal_2535	SSF56281	Metallo-hydrolase/oxidoreductase
Shal_2537	SSF109604	HD-domain/PDEase-like
Shal_2539	SSF143865	CorA soluble domain-like
Shal_2539	SSF144083	Magnesium transport protein CorA, transmembrane region
Shal_2542	SSF46785	"Winged helix" DNA-binding domain
Shal_2542	SSF53850	Periplasmic binding protein-like II
Shal_2543	SSF53167	Purine and uridine phosphorylases
Shal_2545	SSF103481	Multidrug resistance efflux transporter EmrE
Shal_2547	SSF56784	HAD-like
Shal_2548	SSF53092	Creatinase/prolidase N-terminal domain
Shal_2548	SSF55920	Creatinase/aminopeptidase
Shal_2551	SSF51905	FAD/NAD(P)-binding domain
Shal_2552	SSF51905	FAD/NAD(P)-binding domain
Shal_2553	SSF51905	FAD/NAD(P)-binding domain
Shal_2553	SSF54373	FAD-linked reductases, C-terminal domain
Shal_2554	SSF54506	Diaminopimelate epimerase-like
Shal_2555	SSF51569	Aldolase
Shal_2556	SSF54506	Diaminopimelate epimerase-like
Shal_2557	SSF53720	ALDH-like
Shal_2558	SSF46785	"Winged helix" DNA-binding domain
Shal_2558	SSF48008	GntR ligand-binding domain-like
Shal_2559	SSF53901	Thiolase-like
Shal_2561	SSF111126	Ligand-binding domain in the NO signalling and Golgi transport
Shal_2562	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_2562	SSF52172	CheY-like
Shal_2562	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_2563	SSF53098	Ribonuclease H-like
Shal_2564	SSF51206	cAMP-binding domain-like
Shal_2564	SSF54631	CBS-domain pair
Shal_2567	SSF81606	PP2C-like
Shal_2568	SSF103481	Multidrug resistance efflux transporter EmrE
Shal_2569	SSF56219	DNase I-like
Shal_2570	SSF49777	PEBP-like
Shal_2571	SSF52833	Thioredoxin-like
Shal_2572	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2573	SSF109604	HD-domain/PDEase-like
Shal_2575	SSF47781	RuvA domain 2-like
Shal_2575	SSF50249	Nucleic acid-binding proteins
Shal_2575	SSF52113	BRCT domain
Shal_2575	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
Shal_2576	SSF64383	Cell-division protein ZipA, C-terminal domain
Shal_2577	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2579	SSF52172	CheY-like
Shal_2579	SSF55073	Nucleotide cyclase
Shal_2581	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Shal_2582	SSF46689	Homeodomain-like
Shal_2583	SSF46785	"Winged helix" DNA-binding domain
Shal_2583	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_2585	SSF56935	Porins
Shal_2589	SSF46785	"Winged helix" DNA-binding domain
Shal_2589	SSF53850	Periplasmic binding protein-like II
Shal_2590	SSF54631	CBS-domain pair
Shal_2592	SSF51998	PFL-like glycyl radical enzymes
Shal_2593	SSF102114	Radical SAM enzymes
Shal_2595	SSF53067	Actin-like ATPase domain
Shal_2596	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2596	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Shal_2596	SSF75138	HprK N-terminal domain-like
Shal_2597	SSF54909	Dimeric alpha+beta barrel
Shal_2599	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_2601	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Shal_2602	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2604	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2605	SSF52266	SGNH hydrolase
Shal_2607	SSF51126	Pectin lyase-like
Shal_2609	SSF46689	Homeodomain-like
Shal_2610	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_2611	SSF46689	Homeodomain-like
Shal_2611	SSF53098	Ribonuclease H-like
Shal_2612	SSF52096	ClpP/crotonase
Shal_2613	SSF53474	alpha/beta-Hydrolases
Shal_2614	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2615	SSF55120	Pseudouridine synthase
Shal_2615	SSF55174	Alpha-L RNA-binding motif
Shal_2616	SSF46785	"Winged helix" DNA-binding domain
Shal_2618	SSF55821	YrdC/RibB
Shal_2619	SSF89550	PHP domain-like
Shal_2620	SSF74653	TolA/TonB C-terminal domain
Shal_2623	SSF54909	Dimeric alpha+beta barrel
Shal_2624	SSF56219	DNase I-like
Shal_2625	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shal_2627	SSF56281	Metallo-hydrolase/oxidoreductase
Shal_2628	SSF53474	alpha/beta-Hydrolases
Shal_2630	SSF54197	HIT-like
Shal_2631	SSF46785	"Winged helix" DNA-binding domain
Shal_2632	SSF103190	Sensory domain-like
Shal_2632	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shal_2634	SSF48208	Six-hairpin glycosidases
Shal_2635	SSF46689	Homeodomain-like
Shal_2635	SSF51182	RmlC-like cupins
Shal_2636	SSF56712	Prokaryotic type I DNA topoisomerase
Shal_2637	SSF53271	PRTase-like
Shal_2637	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Shal_2639	SSF110997	Sporulation related repeat
Shal_2640	SSF53244	MurD-like peptide ligases, peptide-binding domain
Shal_2640	SSF53623	MurD-like peptide ligases, catalytic domain
Shal_2641	SSF55120	Pseudouridine synthase
Shal_2643	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2643	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Shal_2644	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2644	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Shal_2647	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2648	SSF51419	PLP-binding barrel
Shal_2649	SSF46785	"Winged helix" DNA-binding domain
Shal_2649	SSF53850	Periplasmic binding protein-like II
Shal_2650	SSF55811	Nudix
Shal_2651	SSF141868	EAL domain-like
Shal_2651	SSF55073	Nucleotide cyclase
Shal_2652	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_2653	SSF52091	SpoIIaa-like
Shal_2654	SSF53901	Thiolase-like
Shal_2655	SSF51905	FAD/NAD(P)-binding domain
Shal_2656	SSF75217	alpha/beta knot
Shal_2658	SSF111331	NAD kinase/diacylglycerol kinase-like
Shal_2659	SSF103473	MFS general substrate transporter
Shal_2660	SSF103263	Chorismate synthase, AroC
Shal_2661	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_2662	SSF160443	SMR domain-like
Shal_2663	SSF53254	Phosphoglycerate mutase-like
Shal_2664	SSF63411	LuxS/MPP-like metallohydrolase
Shal_2665	SSF141868	EAL domain-like
Shal_2665	SSF50998	Quinoprotein alcohol dehydrogenase-like
Shal_2665	SSF55073	Nucleotide cyclase
Shal_2665	SSF55785	PYP-like sensor domain (PAS domain)
Shal_2670	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Shal_2670	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2670	SSF52096	ClpP/crotonase
Shal_2671	SSF53901	Thiolase-like
Shal_2672	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2675	SSF53300	vWA-like
Shal_2676	SSF48452	TPR-like
Shal_2676	SSF53300	vWA-like
Shal_2678	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Shal_2678	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Shal_2681	SSF56935	Porins
Shal_2683	SSF111369	HlyD-like secretion proteins
Shal_2684	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shal_2684	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shal_2684	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_2686	SSF52821	Rhodanese/Cell cycle control phosphatase
Shal_2689	SSF142695	RibA-like
Shal_2691	SSF102114	Radical SAM enzymes
Shal_2692	SSF51998	PFL-like glycyl radical enzymes
Shal_2694	SSF52151	FabD/lysophospholipase-like
Shal_2695	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2699	SSF54631	CBS-domain pair
Shal_2699	SSF56176	FAD-binding/transporter-associated domain-like
Shal_2700	SSF54631	CBS-domain pair
Shal_2702	SSF51261	Duplicated hybrid motif
Shal_2703	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2704	SSF56300	Metallo-dependent phosphatases
Shal_2705	SSF53383	PLP-dependent transferases
Shal_2706	SSF103473	MFS general substrate transporter
Shal_2707	SSF81342	Transmembrane di-heme cytochromes
Shal_2709	SSF56601	beta-lactamase/transpeptidase-like
Shal_2710	SSF56601	beta-lactamase/transpeptidase-like
Shal_2712	SSF46785	"Winged helix" DNA-binding domain
Shal_2712	SSF53850	Periplasmic binding protein-like II
Shal_2713	SSF56112	Protein kinase-like (PK-like)
Shal_2714	SSF89946	Hypothetical protein VC0424
Shal_2715	SSF55174	Alpha-L RNA-binding motif
Shal_2716	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_2717	SSF54534	FKBP-like
Shal_2719	SSF55073	Nucleotide cyclase
Shal_2720	SSF48452	TPR-like
Shal_2720	SSF81901	HCP-like
Shal_2721	SSF74653	TolA/TonB C-terminal domain
Shal_2727	SSF56935	Porins
Shal_2728	SSF56935	Porins
Shal_2729	SSF53098	Ribonuclease H-like
Shal_2729	SSF56672	DNA/RNA polymerases
Shal_2730	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2735	SSF53474	alpha/beta-Hydrolases
Shal_2736	SSF103473	MFS general substrate transporter
Shal_2737	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2737	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Shal_2737	SSF75138	HprK N-terminal domain-like
Shal_2738	SSF53067	Actin-like ATPase domain
Shal_2739	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2740	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_2741	SSF100950	NagB/RpiA/CoA transferase-like
Shal_2743	SSF53474	alpha/beta-Hydrolases
Shal_2744	SSF53474	alpha/beta-Hydrolases
Shal_2745	SSF53474	alpha/beta-Hydrolases
Shal_2746	SSF46785	"Winged helix" DNA-binding domain
Shal_2746	SSF53850	Periplasmic binding protein-like II
Shal_2747	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2748	SSF53901	Thiolase-like
Shal_2749	SSF47781	RuvA domain 2-like
Shal_2751	SSF53383	PLP-dependent transferases
Shal_2757	SSF46689	Homeodomain-like
Shal_2757	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2758	SSF53850	Periplasmic binding protein-like II
Shal_2759	SSF161098	MetI-like
Shal_2760	SSF161098	MetI-like
Shal_2761	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2762	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2764	SSF109998	Triger factor/SurA peptide-binding domain-like
Shal_2764	SSF54534	FKBP-like
Shal_2765	SSF47729	IHF-like DNA-binding proteins
Shal_2766	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2766	SSF54211	Ribosomal protein S5 domain 2-like
Shal_2766	SSF88697	PUA domain-like
Shal_2767	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2767	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Shal_2768	SSF52096	ClpP/crotonase
Shal_2769	SSF102735	Trigger factor ribosome-binding domain
Shal_2769	SSF109998	Triger factor/SurA peptide-binding domain-like
Shal_2769	SSF54534	FKBP-like
Shal_2770	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2770	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Shal_2771	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Shal_2771	SSF52374	Nucleotidylyl transferase
Shal_2772	SSF50891	Cyclophilin-like
Shal_2773	SSF56300	Metallo-dependent phosphatases
Shal_2775	SSF50715	Ribosomal protein L25-like
Shal_2775	SSF52374	Nucleotidylyl transferase
Shal_2776	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2777	SSF50037	C-terminal domain of transcriptional repressors
Shal_2778	SSF48695	Multiheme cytochromes
Shal_2779	SSF56935	Porins
Shal_2780	SSF48695	Multiheme cytochromes
Shal_2781	SSF48695	Multiheme cytochromes
Shal_2782	SSF48695	Multiheme cytochromes
Shal_2783	SSF48695	Multiheme cytochromes
Shal_2784	SSF48695	Multiheme cytochromes
Shal_2785	SSF48695	Multiheme cytochromes
Shal_2786	SSF56935	Porins
Shal_2788	SSF52141	Uracil-DNA glycosylase-like
Shal_2790	SSF54523	Pili subunits
Shal_2791	SSF103088	OmpA-like
Shal_2791	SSF56925	OMPA-like
Shal_2800	SSF110738	Glycerate kinase I
Shal_2801	SSF53383	PLP-dependent transferases
Shal_2802	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_2803	SSF55073	Nucleotide cyclase
Shal_2807	SSF53955	Lysozyme-like
Shal_2810	SSF53738	Phosphoglucomutase, first 3 domains
Shal_2810	SSF55957	Phosphoglucomutase, C-terminal domain
Shal_2811	SSF55120	Pseudouridine synthase
Shal_2812	SSF81342	Transmembrane di-heme cytochromes
Shal_2813	SSF47616	GST C-terminal domain-like
Shal_2813	SSF52833	Thioredoxin-like
Shal_2814	SSF50182	Sm-like ribonucleoproteins
Shal_2817	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2818	SSF56801	Acetyl-CoA synthetase-like
Shal_2819	SSF53474	alpha/beta-Hydrolases
Shal_2820	SSF53901	Thiolase-like
Shal_2821	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_2826	SSF109755	PhoU-like
Shal_2827	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2828	SSF161098	MetI-like
Shal_2829	SSF101908	Putative isomerase YbhE
Shal_2829	SSF161098	MetI-like
Shal_2830	SSF55021	ACT-like
Shal_2831	SSF55073	Nucleotide cyclase
Shal_2833	SSF50621	Alanine racemase C-terminal domain-like
Shal_2833	SSF51419	PLP-binding barrel
Shal_2834	SSF46689	Homeodomain-like
Shal_2834	SSF48498	Tetracyclin repressor-like, C-terminal domain
Shal_2836	SSF51338	Composite domain of metallo-dependent hydrolases
Shal_2836	SSF51556	Metallo-dependent hydrolases
Shal_2840	SSF103647	TSP type-3 repeat
Shal_2843	SSF53098	Ribonuclease H-like
Shal_2843	SSF55658	L9 N-domain-like
Shal_2845	SSF53187	Zn-dependent exopeptidases
Shal_2846	SSF143631	ApbE-like
Shal_2847	SSF51905	FAD/NAD(P)-binding domain
Shal_2847	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Shal_2849	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_2849	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_2850	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_2850	SSF52172	CheY-like
Shal_2851	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_2853	SSF101744	Rof/RNase P subunit-like
Shal_2857	SSF52402	Adenine nucleotide alpha hydrolases-like
Shal_2859	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Shal_2861	SSF55718	SCP-like
Shal_2861	SSF56281	Metallo-hydrolase/oxidoreductase
Shal_2862	SSF46785	"Winged helix" DNA-binding domain
Shal_2862	SSF53850	Periplasmic binding protein-like II
Shal_2863	SSF53474	alpha/beta-Hydrolases
Shal_2864	SSF53649	Alkaline phosphatase-like
Shal_2866	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2867	SSF55008	HMA, heavy metal-associated domain
Shal_2867	SSF56784	HAD-like
Shal_2867	SSF81653	Calcium ATPase, transduction domain A
Shal_2867	SSF81665	Calcium ATPase, transmembrane domain M
Shal_2868	SSF46955	Putative DNA-binding domain
Shal_2869	SSF53474	alpha/beta-Hydrolases
Shal_2869	SSF82171	DPP6 N-terminal domain-like
Shal_2872	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2873	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Shal_2873	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2874	SSF52096	ClpP/crotonase
Shal_2875	SSF52096	ClpP/crotonase
Shal_2876	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Shal_2876	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Shal_2877	SSF53720	ALDH-like
Shal_2878	SSF53901	Thiolase-like
Shal_2879	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_2881	SSF49354	PapD-like
Shal_2882	SSF49452	Starch-binding domain-like
Shal_2884	SSF52317	Class I glutamine amidotransferase-like
Shal_2886	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2887	SSF56925	OMPA-like
Shal_2888	SSF111369	HlyD-like secretion proteins
Shal_2889	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shal_2889	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shal_2889	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_2890	SSF46785	"Winged helix" DNA-binding domain
Shal_2890	SSF53850	Periplasmic binding protein-like II
Shal_2891	SSF52096	ClpP/crotonase
Shal_2892	SSF102114	Radical SAM enzymes
Shal_2893	SSF56112	Protein kinase-like (PK-like)
Shal_2896	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_2897	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2899	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Shal_2899	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2900	SSF56801	Acetyl-CoA synthetase-like
Shal_2901	SSF46955	Putative DNA-binding domain
Shal_2902	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Shal_2902	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Shal_2903	SSF52096	ClpP/crotonase
Shal_2904	SSF52096	ClpP/crotonase
Shal_2905	SSF51230	Single hybrid motif
Shal_2905	SSF51246	Rudiment single hybrid motif
Shal_2905	SSF52440	PreATP-grasp domain
Shal_2905	SSF56059	Glutathione synthetase ATP-binding domain-like
Shal_2906	SSF51230	Single hybrid motif
Shal_2907	SSF51569	Aldolase
Shal_2908	SSF100950	NagB/RpiA/CoA transferase-like
Shal_2909	SSF100950	NagB/RpiA/CoA transferase-like
Shal_2910	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shal_2910	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shal_2910	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_2911	SSF111369	HlyD-like secretion proteins
Shal_2912	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_2912	SSF52172	CheY-like
Shal_2913	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_2913	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_2915	SSF53474	alpha/beta-Hydrolases
Shal_2916	SSF55718	SCP-like
Shal_2916	SSF56281	Metallo-hydrolase/oxidoreductase
Shal_2917	SSF54523	Pili subunits
Shal_2918	SSF48695	Multiheme cytochromes
Shal_2920	SSF48695	Multiheme cytochromes
Shal_2922	SSF55298	YjgF-like
Shal_2924	SSF89155	TorD-like
Shal_2925	SSF54862	4Fe-4S ferredoxins
Shal_2926	SSF50692	ADC-like
Shal_2926	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shal_2928	SSF48695	Multiheme cytochromes
Shal_2936	SSF143422	Transposase IS200-like
Shal_2938	SSF140478	LemA-like
Shal_2941	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_2941	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Shal_2942	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shal_2944	SSF52402	Adenine nucleotide alpha hydrolases-like
Shal_2944	SSF52467	DHS-like NAD/FAD-binding domain
Shal_2945	SSF52402	Adenine nucleotide alpha hydrolases-like
Shal_2946	SSF81273	H-NS histone-like proteins
Shal_2947	SSF51338	Composite domain of metallo-dependent hydrolases
Shal_2947	SSF51556	Metallo-dependent hydrolases
Shal_2948	SSF51338	Composite domain of metallo-dependent hydrolases
Shal_2948	SSF51556	Metallo-dependent hydrolases
Shal_2950	SSF118196	YaeB-like
Shal_2951	SSF51161	Trimeric LpxA-like enzymes
Shal_2953	SSF46785	"Winged helix" DNA-binding domain
Shal_2953	SSF53850	Periplasmic binding protein-like II
Shal_2954	SSF102114	Radical SAM enzymes
Shal_2955	SSF100950	NagB/RpiA/CoA transferase-like
Shal_2956	SSF100950	NagB/RpiA/CoA transferase-like
Shal_2957	SSF53383	PLP-dependent transferases
Shal_2958	SSF53901	Thiolase-like
Shal_2959	SSF56317	Carbon-nitrogen hydrolase
Shal_2960	SSF52954	Class II aaRS ABD-related
Shal_2960	SSF55681	Class II aaRS and biotin synthetases
Shal_2960	SSF55826	YbaK/ProRS associated domain
Shal_2961	SSF52151	FabD/lysophospholipase-like
Shal_2962	SSF52266	SGNH hydrolase
Shal_2963	SSF116726	TrkA C-terminal domain-like
Shal_2963	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2964	SSF55073	Nucleotide cyclase
Shal_2965	SSF52402	Adenine nucleotide alpha hydrolases-like
Shal_2965	SSF56037	PheT/TilS domain
Shal_2965	SSF82829	MesJ substrate recognition domain-like
Shal_2966	SSF160975	AF1531-like
Shal_2966	SSF89550	PHP domain-like
Shal_2967	SSF53098	Ribonuclease H-like
Shal_2968	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Shal_2969	SSF51161	Trimeric LpxA-like enzymes
Shal_2970	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_2971	SSF51161	Trimeric LpxA-like enzymes
Shal_2972	SSF111384	OmpH-like
Shal_2974	SSF50156	PDZ domain-like
Shal_2975	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_2975	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Shal_2975	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
Shal_2977	SSF64005	Undecaprenyl diphosphate synthase
Shal_2978	SSF55194	Ribosome recycling factor, RRF
Shal_2979	SSF53633	Carbamate kinase-like
Shal_2980	SSF46934	UBA-like
Shal_2980	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
Shal_2981	SSF52313	Ribosomal protein S2
Shal_2982	SSF55920	Creatinase/aminopeptidase
Shal_2983	SSF109604	HD-domain/PDEase-like
Shal_2983	SSF55021	ACT-like
Shal_2983	SSF81301	Nucleotidyltransferase
Shal_2983	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
Shal_2984	SSF51161	Trimeric LpxA-like enzymes
Shal_2986	SSF53328	Formyltransferase
Shal_2986	SSF55021	ACT-like
Shal_2987	SSF52218	Flavoproteins
Shal_2988	SSF55120	Pseudouridine synthase
Shal_2989	SSF158452	YqcC-like
Shal_2993	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_2999	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Shal_3002	SSF46785	"Winged helix" DNA-binding domain
Shal_3002	SSF53850	Periplasmic binding protein-like II
Shal_3003	SSF46785	"Winged helix" DNA-binding domain
Shal_3003	SSF53850	Periplasmic binding protein-like II
Shal_3004	SSF55718	SCP-like
Shal_3004	SSF56281	Metallo-hydrolase/oxidoreductase
Shal_3005	SSF56214	4'-phosphopantetheinyl transferase
Shal_3006	SSF50447	Translation proteins
Shal_3006	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3006	SSF54211	Ribosomal protein S5 domain 2-like
Shal_3006	SSF54980	EF-G C-terminal domain-like
Shal_3008	SSF47336	ACP-like
Shal_3008	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_3008	SSF52151	FabD/lysophospholipase-like
Shal_3008	SSF53901	Thiolase-like
Shal_3008	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
Shal_3009	SSF52151	FabD/lysophospholipase-like
Shal_3010	SSF53901	Thiolase-like
Shal_3010	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_3011	SSF51395	FMN-linked oxidoreductases
Shal_3012	SSF51055	Carbohydrate binding domain
Shal_3013	SSF55073	Nucleotide cyclase
Shal_3014	SSF54523	Pili subunits
Shal_3015	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Shal_3017	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3018	SSF48452	TPR-like
Shal_3019	SSF53187	Zn-dependent exopeptidases
Shal_3019	SSF55031	Bacterial exopeptidase dimerisation domain
Shal_3020	SSF56935	Porins
Shal_3021	SSF56935	Porins
Shal_3025	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_3025	SSF52172	CheY-like
Shal_3026	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_3026	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_3028	SSF52058	L domain-like
Shal_3028	SSF56112	Protein kinase-like (PK-like)
Shal_3033	SSF53187	Zn-dependent exopeptidases
Shal_3033	SSF55031	Bacterial exopeptidase dimerisation domain
Shal_3034	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_3035	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_3036	SSF55811	Nudix
Shal_3039	SSF118215	Proton glutamate symport protein
Shal_3040	SSF110581	Indigoidine synthase A-like
Shal_3041	SSF46785	"Winged helix" DNA-binding domain
Shal_3041	SSF53613	Ribokinase-like
Shal_3042	SSF116726	TrkA C-terminal domain-like
Shal_3043	SSF53383	PLP-dependent transferases
Shal_3044	SSF54909	Dimeric alpha+beta barrel
Shal_3045	SSF89447	AbrB/MazE/MraZ-like
Shal_3048	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_3051	SSF52833	Thioredoxin-like
Shal_3052	SSF53671	Aspartate/ornithine carbamoyltransferase
Shal_3053	SSF54893	Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
Shal_3053	SSF57825	Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
Shal_3055	SSF48371	ARM repeat
Shal_3055	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shal_3055	SSF63737	Leukotriene A4 hydrolase N-terminal domain
Shal_3057	SSF53850	Periplasmic binding protein-like II
Shal_3058	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_3058	SSF55785	PYP-like sensor domain (PAS domain)
Shal_3058	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_3059	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_3059	SSF52172	CheY-like
Shal_3060	SSF56935	Porins
Shal_3062	SSF50156	PDZ domain-like
Shal_3062	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shal_3063	SSF48452	TPR-like
Shal_3064	SSF55073	Nucleotide cyclase
Shal_3065	SSF102405	MCP/YpsA-like
Shal_3066	SSF47807	5' to 3' exonuclease, C-terminal subdomain
Shal_3066	SSF88723	PIN domain-like
Shal_3068	SSF53474	alpha/beta-Hydrolases
Shal_3068	SSF82171	DPP6 N-terminal domain-like
Shal_3069	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Shal_3070	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_3072	SSF53474	alpha/beta-Hydrolases
Shal_3073	SSF46785	"Winged helix" DNA-binding domain
Shal_3073	SSF53850	Periplasmic binding protein-like II
Shal_3075	SSF143437	THUMP domain-like
Shal_3075	SSF52402	Adenine nucleotide alpha hydrolases-like
Shal_3075	SSF52821	Rhodanese/Cell cycle control phosphatase
Shal_3076	SSF103088	OmpA-like
Shal_3078	SSF116842	XseB-like
Shal_3079	SSF48576	Terpenoid synthases
Shal_3080	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Shal_3080	SSF52922	TK C-terminal domain-like
Shal_3081	SSF51064	Head domain of nucleotide exchange factor GrpE
Shal_3081	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
Shal_3082	SSF111331	NAD kinase/diacylglycerol kinase-like
Shal_3084	SSF46548	alpha-helical ferredoxin
Shal_3084	SSF55103	FAD-linked oxidases, C-terminal domain
Shal_3084	SSF56176	FAD-binding/transporter-associated domain-like
Shal_3086	SSF100950	NagB/RpiA/CoA transferase-like
Shal_3086	SSF46548	alpha-helical ferredoxin
Shal_3087	SSF100950	NagB/RpiA/CoA transferase-like
Shal_3088	SSF74653	TolA/TonB C-terminal domain
Shal_3090	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3093	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3094	SSF141868	EAL domain-like
Shal_3094	SSF55073	Nucleotide cyclase
Shal_3094	SSF55785	PYP-like sensor domain (PAS domain)
Shal_3095	SSF82784	OsmC-like
Shal_3097	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_3098	SSF141868	EAL domain-like
Shal_3098	SSF55073	Nucleotide cyclase
Shal_3099	SSF109604	HD-domain/PDEase-like
Shal_3103	SSF51338	Composite domain of metallo-dependent hydrolases
Shal_3103	SSF51556	Metallo-dependent hydrolases
Shal_3104	SSF51338	Composite domain of metallo-dependent hydrolases
Shal_3104	SSF51556	Metallo-dependent hydrolases
Shal_3105	SSF46689	Homeodomain-like
Shal_3106	SSF54862	4Fe-4S ferredoxins
Shal_3107	SSF55120	Pseudouridine synthase
Shal_3108	SSF55718	SCP-like
Shal_3111	SSF50129	GroES-like
Shal_3111	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_3113	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shal_3116	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3119	SSF141371	PilZ domain-like
Shal_3120	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3120	SSF54211	Ribosomal protein S5 domain 2-like
Shal_3121	SSF141371	PilZ domain-like
Shal_3124	SSF53649	Alkaline phosphatase-like
Shal_3126	SSF54862	4Fe-4S ferredoxins
Shal_3127	SSF50692	ADC-like
Shal_3127	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shal_3128	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_3128	SSF53850	Periplasmic binding protein-like II
Shal_3128	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_3129	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_3129	SSF52172	CheY-like
Shal_3130	SSF53474	alpha/beta-Hydrolases
Shal_3131	SSF56784	HAD-like
Shal_3133	SSF53167	Purine and uridine phosphorylases
Shal_3134	SSF143856	DeoB insert domain-like
Shal_3134	SSF53649	Alkaline phosphatase-like
Shal_3135	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Shal_3135	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Shal_3135	SSF54680	Pyrimidine nucleoside phosphorylase C-terminal domain
Shal_3136	SSF51569	Aldolase
Shal_3137	SSF111364	Tsx-like channel
Shal_3139	SSF51556	Metallo-dependent hydrolases
Shal_3140	SSF50447	Translation proteins
Shal_3140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3140	SSF54980	EF-G C-terminal domain-like
Shal_3141	SSF48452	TPR-like
Shal_3142	SSF46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
Shal_3142	SSF50249	Nucleic acid-binding proteins
Shal_3142	SSF54211	Ribosomal protein S5 domain 2-like
Shal_3142	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
Shal_3142	SSF55666	Ribonuclease PH domain 2-like
Shal_3143	SSF141868	EAL domain-like
Shal_3143	SSF55073	Nucleotide cyclase
Shal_3144	SSF47060	S15/NS1 RNA-binding domain
Shal_3145	SSF55120	Pseudouridine synthase
Shal_3145	SSF88697	PUA domain-like
Shal_3146	SSF89919	Ribosome-binding factor A, RbfA
Shal_3147	SSF46955	Putative DNA-binding domain
Shal_3147	SSF50447	Translation proteins
Shal_3147	SSF52156	Initiation factor IF2/eIF5b, domain 3
Shal_3147	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3148	SSF47794	Rad51 N-terminal domain-like
Shal_3148	SSF50249	Nucleic acid-binding proteins
Shal_3148	SSF54814	Prokaryotic type KH domain (KH-domain type II)
Shal_3148	SSF69705	Transcription factor NusA, N-terminal domain
Shal_3149	SSF74942	YhbC-like, C-terminal domain
Shal_3149	SSF75420	YhbC-like, N-terminal domain
Shal_3151	SSF51351	Triosephosphate isomerase (TIM)
Shal_3152	SSF53738	Phosphoglucomutase, first 3 domains
Shal_3152	SSF55957	Phosphoglucomutase, C-terminal domain
Shal_3153	SSF51717	Dihydropteroate synthetase-like
Shal_3154	SSF140990	FtsH protease domain-like
Shal_3154	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3155	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_3156	SSF75471	YhbY-like
Shal_3157	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_3158	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_3160	SSF46557	GreA transcript cleavage protein, N-terminal domain
Shal_3160	SSF54534	FKBP-like
Shal_3161	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
Shal_3161	SSF52335	Methylglyoxal synthase-like
Shal_3161	SSF52440	PreATP-grasp domain
Shal_3161	SSF56059	Glutathione synthetase ATP-binding domain-like
Shal_3162	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
Shal_3162	SSF52317	Class I glutamine amidotransferase-like
Shal_3163	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_3163	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Shal_3164	SSF54534	FKBP-like
Shal_3166	SSF46565	Chaperone J-domain
Shal_3166	SSF49493	HSP40/DnaJ peptide-binding domain
Shal_3166	SSF57938	DnaJ/Hsp40 cysteine-rich domain
Shal_3167	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
Shal_3167	SSF53067	Actin-like ATPase domain
Shal_3168	SSF103481	Multidrug resistance efflux transporter EmrE
Shal_3169	SSF53720	ALDH-like
Shal_3170	SSF53633	Carbamate kinase-like
Shal_3170	SSF88697	PUA domain-like
Shal_3172	SSF141571	Pentapeptide repeat-like
Shal_3173	SSF143422	Transposase IS200-like
Shal_3175	SSF53187	Zn-dependent exopeptidases
Shal_3176	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
Shal_3176	SSF56672	DNA/RNA polymerases
Shal_3178	SSF47240	Ferritin-like
Shal_3179	SSF47240	Ferritin-like
Shal_3181	SSF143631	ApbE-like
Shal_3182	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Shal_3182	SSF54292	2Fe-2S ferredoxin-like
Shal_3182	SSF63380	Riboflavin synthase domain-like
Shal_3188	SSF63411	LuxS/MPP-like metallohydrolase
Shal_3189	SSF82657	BolA-like
Shal_3190	SSF51197	Clavaminate synthase-like
Shal_3191	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_3193	SSF56925	OMPA-like
Shal_3195	SSF50891	Cyclophilin-like
Shal_3197	SSF103473	MFS general substrate transporter
Shal_3198	SSF89963	YajQ-like
Shal_3200	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Shal_3200	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_3201	SSF161070	SNF-like
Shal_3203	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
Shal_3206	SSF51569	Aldolase
Shal_3210	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_3211	SSF75620	Release factor
Shal_3212	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_3212	SSF69075	Glutamyl tRNA-reductase dimerization domain
Shal_3212	SSF69742	Glutamyl tRNA-reductase catalytic, N-terminal domain
Shal_3213	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
Shal_3214	SSF54211	Ribosomal protein S5 domain 2-like
Shal_3214	SSF55060	GHMP Kinase, C-terminal domain
Shal_3215	SSF53271	PRTase-like
Shal_3218	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3218	SSF81271	TGS-like
Shal_3219	SSF53178	Peptidyl-tRNA hydrolase-like
Shal_3220	SSF51905	FAD/NAD(P)-binding domain
Shal_3222	SSF102114	Radical SAM enzymes
Shal_3223	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3224	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shal_3225	SSF54631	CBS-domain pair
Shal_3225	SSF56176	FAD-binding/transporter-associated domain-like
Shal_3226	SSF56317	Carbon-nitrogen hydrolase
Shal_3228	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Shal_3228	SSF50677	ValRS/IleRS/LeuRS editing domain
Shal_3228	SSF52374	Nucleotidylyl transferase
Shal_3230	SSF48019	post-AAA+ oligomerization domain-like
Shal_3230	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3231	SSF52374	Nucleotidylyl transferase
Shal_3232	SSF81301	Nucleotidyltransferase
Shal_3233	SSF75217	alpha/beta knot
Shal_3234	SSF56519	Penicillin binding protein dimerisation domain
Shal_3234	SSF56601	beta-lactamase/transpeptidase-like
Shal_3236	SSF53955	Lysozyme-like
Shal_3237	SSF110997	Sporulation related repeat
Shal_3237	SSF50685	Barwin-like endoglucanases
Shal_3238	SSF56601	beta-lactamase/transpeptidase-like
Shal_3238	SSF69189	Penicillin-binding protein associated domain
Shal_3239	SSF117991	YbeD/HP0495-like
Shal_3240	SSF55681	Class II aaRS and biotin synthetases
Shal_3241	SSF102114	Radical SAM enzymes
Shal_3242	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_3243	SSF102220	DNA polymerase III psi subunit
Shal_3246	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3246	SSF81923	Double Clp-N motif
Shal_3247	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
Shal_3248	SSF55120	Pseudouridine synthase
Shal_3248	SSF55174	Alpha-L RNA-binding motif
Shal_3249	SSF48452	TPR-like
Shal_3250	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_3251	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shal_3252	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_3253	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Shal_3253	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Shal_3256	SSF55120	Pseudouridine synthase
Shal_3256	SSF55174	Alpha-L RNA-binding motif
Shal_3257	SSF51161	Trimeric LpxA-like enzymes
Shal_3258	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shal_3259	SSF81301	Nucleotidyltransferase
Shal_3260	SSF160631	SMI1/KNR4-like
Shal_3261	SSF47413	lambda repressor-like DNA-binding domains
Shal_3262	SSF47616	GST C-terminal domain-like
Shal_3262	SSF52833	Thioredoxin-like
Shal_3265	SSF56601	beta-lactamase/transpeptidase-like
Shal_3267	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_3267	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Shal_3270	SSF54862	4Fe-4S ferredoxins
Shal_3271	SSF50692	ADC-like
Shal_3271	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shal_3272	SSF158675	Sama2622-like
Shal_3273	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
Shal_3274	SSF48452	TPR-like
Shal_3274	SSF55073	Nucleotide cyclase
Shal_3275	SSF46548	alpha-helical ferredoxin
Shal_3276	SSF89807	Dodecin-like
Shal_3277	SSF69118	AhpD-like
Shal_3278	SSF46785	"Winged helix" DNA-binding domain
Shal_3278	SSF53850	Periplasmic binding protein-like II
Shal_3279	SSF52833	Thioredoxin-like
Shal_3280	SSF52833	Thioredoxin-like
Shal_3281	SSF52833	Thioredoxin-like
Shal_3283	SSF46785	"Winged helix" DNA-binding domain
Shal_3283	SSF53850	Periplasmic binding protein-like II
Shal_3284	SSF109604	HD-domain/PDEase-like
Shal_3285	SSF52266	SGNH hydrolase
Shal_3286	SSF56935	Porins
Shal_3287	SSF52218	Flavoproteins
Shal_3288	SSF46785	"Winged helix" DNA-binding domain
Shal_3288	SSF53850	Periplasmic binding protein-like II
Shal_3289	SSF118215	Proton glutamate symport protein
Shal_3289	SSF53850	Periplasmic binding protein-like II
Shal_3290	SSF55120	Pseudouridine synthase
Shal_3290	SSF55174	Alpha-L RNA-binding motif
Shal_3291	SSF51556	Metallo-dependent hydrolases
Shal_3294	SSF54534	FKBP-like
Shal_3295	SSF50952	Soluble quinoprotein glucose dehydrogenase
Shal_3296	SSF53187	Zn-dependent exopeptidases
Shal_3297	SSF52440	PreATP-grasp domain
Shal_3297	SSF56059	Glutathione synthetase ATP-binding domain-like
Shal_3298	SSF55073	Nucleotide cyclase
Shal_3299	SSF51395	FMN-linked oxidoreductases
Shal_3300	SSF56784	HAD-like
Shal_3301	SSF55021	ACT-like
Shal_3301	SSF81301	Nucleotidyltransferase
Shal_3301	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
Shal_3301	SSF81891	Poly A polymerase C-terminal region-like
Shal_3304	SSF56281	Metallo-hydrolase/oxidoreductase
Shal_3305	SSF56935	Porins
Shal_3307	SSF117892	Band 7/SPFH domain
Shal_3309	SSF52058	L domain-like
Shal_3310	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shal_3311	SSF47616	GST C-terminal domain-like
Shal_3311	SSF52833	Thioredoxin-like
Shal_3312	SSF51182	RmlC-like cupins
Shal_3314	SSF51338	Composite domain of metallo-dependent hydrolases
Shal_3314	SSF51556	Metallo-dependent hydrolases
Shal_3317	SSF51604	Enolase C-terminal domain-like
Shal_3317	SSF54826	Enolase N-terminal domain-like
Shal_3319	SSF51905	FAD/NAD(P)-binding domain
Shal_3320	SSF46785	"Winged helix" DNA-binding domain
Shal_3320	SSF48008	GntR ligand-binding domain-like
Shal_3324	SSF103481	Multidrug resistance efflux transporter EmrE
Shal_3325	SSF51126	Pectin lyase-like
Shal_3326	SSF82784	OsmC-like
Shal_3328	SSF53067	Actin-like ATPase domain
Shal_3329	SSF51905	FAD/NAD(P)-binding domain
Shal_3330	SSF55103	FAD-linked oxidases, C-terminal domain
Shal_3330	SSF56176	FAD-binding/transporter-associated domain-like
Shal_3331	SSF46689	Homeodomain-like
Shal_3332	SSF48403	Ankyrin repeat
Shal_3335	SSF48695	Multiheme cytochromes
Shal_3337	SSF50249	Nucleic acid-binding proteins
Shal_3340	SSF118196	YaeB-like
Shal_3341	SSF55073	Nucleotide cyclase
Shal_3344	SSF111369	HlyD-like secretion proteins
Shal_3346	SSF46626	Cytochrome c
Shal_3347	SSF53187	Zn-dependent exopeptidases
Shal_3347	SSF55031	Bacterial exopeptidase dimerisation domain
Shal_3348	SSF159594	XCC0632-like
Shal_3351	SSF53927	Cytidine deaminase-like
Shal_3367	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shal_3368	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
Shal_3368	SSF56300	Metallo-dependent phosphatases
Shal_3369	SSF53850	Periplasmic binding protein-like II
Shal_3371	SSF143422	Transposase IS200-like
Shal_3373	SSF53383	PLP-dependent transferases
Shal_3374	SSF51230	Single hybrid motif
Shal_3375	SSF101790	Aminomethyltransferase beta-barrel domain
Shal_3375	SSF103025	Folate-binding domain
Shal_3376	SSF51905	FAD/NAD(P)-binding domain
Shal_3377	SSF51905	FAD/NAD(P)-binding domain
Shal_3378	SSF101327	YgfB-like
Shal_3379	SSF102829	Cell division protein ZapA-like
Shal_3380	SSF51695	PLC-like phosphodiesterases
Shal_3385	SSF46785	"Winged helix" DNA-binding domain
Shal_3385	SSF51206	cAMP-binding domain-like
Shal_3386	SSF100950	NagB/RpiA/CoA transferase-like
Shal_3389	SSF52141	Uracil-DNA glycosylase-like
Shal_3390	SSF54523	Pili subunits
Shal_3391	SSF54523	Pili subunits
Shal_3394	SSF52833	Thioredoxin-like
Shal_3395	SSF56801	Acetyl-CoA synthetase-like
Shal_3396	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3396	SSF90123	ABC transporter transmembrane region
Shal_3397	SSF50475	FMN-binding split barrel
Shal_3398	SSF144064	Heme iron utilization protein-like
Shal_3399	SSF56935	Porins
Shal_3400	SSF74653	TolA/TonB C-terminal domain
Shal_3403	SSF53807	"Helical backbone" metal receptor
Shal_3404	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Shal_3405	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3406	SSF46689	Homeodomain-like
Shal_3406	SSF48498	Tetracyclin repressor-like, C-terminal domain
Shal_3407	SSF53597	Dihydrofolate reductase-like
Shal_3409	SSF46785	"Winged helix" DNA-binding domain
Shal_3409	SSF53850	Periplasmic binding protein-like II
Shal_3411	SSF102114	Radical SAM enzymes
Shal_3414	SSF48695	Multiheme cytochromes
Shal_3415	SSF50692	ADC-like
Shal_3415	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shal_3416	SSF89155	TorD-like
Shal_3417	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Shal_3417	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_3417	SSF52172	CheY-like
Shal_3417	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_3418	SSF53822	Periplasmic binding protein-like I
Shal_3419	SSF52172	CheY-like
Shal_3421	SSF81324	Voltage-gated potassium channels
Shal_3425	SSF48452	TPR-like
Shal_3426	SSF52402	Adenine nucleotide alpha hydrolases-like
Shal_3427	SSF52402	Adenine nucleotide alpha hydrolases-like
Shal_3428	SSF52091	SpoIIaa-like
Shal_3429	SSF53720	ALDH-like
Shal_3430	SSF46689	Homeodomain-like
Shal_3430	SSF48498	Tetracyclin repressor-like, C-terminal domain
Shal_3431	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_3431	SSF55785	PYP-like sensor domain (PAS domain)
Shal_3431	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_3432	SSF46689	Homeodomain-like
Shal_3432	SSF52172	CheY-like
Shal_3432	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3435	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3438	SSF56935	Porins
Shal_3439	SSF103473	MFS general substrate transporter
Shal_3440	SSF50692	ADC-like
Shal_3440	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shal_3441	SSF54862	4Fe-4S ferredoxins
Shal_3442	SSF89155	TorD-like
Shal_3443	SSF103501	Respiratory nitrate reductase 1 gamma chain
Shal_3446	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3446	SSF55781	GAF domain-like
Shal_3447	SSF51905	FAD/NAD(P)-binding domain
Shal_3447	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Shal_3448	SSF48557	L-aspartase-like
Shal_3449	SSF48695	Multiheme cytochromes
Shal_3450	SSF161084	MAPEG domain-like
Shal_3452	SSF53807	"Helical backbone" metal receptor
Shal_3453	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3454	SSF52317	Class I glutamine amidotransferase-like
Shal_3454	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3455	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3458	SSF52733	Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
Shal_3459	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Shal_3460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3461	SSF53254	Phosphoglycerate mutase-like
Shal_3462	SSF47644	Methionine synthase domain
Shal_3462	SSF51717	Dihydropteroate synthetase-like
Shal_3462	SSF52242	Cobalamin (vitamin B12)-binding domain
Shal_3462	SSF56507	Methionine synthase activation domain-like
Shal_3462	SSF82282	Homocysteine S-methyltransferase
Shal_3465	SSF54111	Urease, gamma-subunit
Shal_3466	SSF51278	Urease, beta-subunit
Shal_3467	SSF51338	Composite domain of metallo-dependent hydrolases
Shal_3467	SSF51556	Metallo-dependent hydrolases
Shal_3468	SSF69287	Urease metallochaperone UreE, N-terminal domain
Shal_3468	SSF69737	Urease metallochaperone UreE, C-terminal domain
Shal_3470	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3471	SSF55298	YjgF-like
Shal_3472	SSF56507	Methionine synthase activation domain-like
Shal_3473	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_3474	SSF51316	Mss4-like
Shal_3475	SSF50182	Sm-like ribonucleoproteins
Shal_3475	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
Shal_3475	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
Shal_3477	SSF51556	Metallo-dependent hydrolases
Shal_3479	SSF49265	Fibronectin type III
Shal_3481	SSF52058	L domain-like
Shal_3483	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shal_3484	SSF53850	Periplasmic binding protein-like II
Shal_3485	SSF161098	MetI-like
Shal_3486	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3487	SSF55826	YbaK/ProRS associated domain
Shal_3489	SSF52218	Flavoproteins
Shal_3492	SSF53474	alpha/beta-Hydrolases
Shal_3492	SSF82171	DPP6 N-terminal domain-like
Shal_3495	SSF49478	Cna protein B-type domain
Shal_3500	SSF51905	FAD/NAD(P)-binding domain
Shal_3503	SSF46689	Homeodomain-like
Shal_3503	SSF51182	RmlC-like cupins
Shal_3504	SSF103473	MFS general substrate transporter
Shal_3506	SSF111369	HlyD-like secretion proteins
Shal_3507	SSF46785	"Winged helix" DNA-binding domain
Shal_3507	SSF53850	Periplasmic binding protein-like II
Shal_3508	SSF56935	Porins
Shal_3513	SSF50249	Nucleic acid-binding proteins
Shal_3514	SSF53098	Ribonuclease H-like
Shal_3518	SSF48695	Multiheme cytochromes
Shal_3519	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_3522	SSF52833	Thioredoxin-like
Shal_3523	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Shal_3524	SSF81342	Transmembrane di-heme cytochromes
Shal_3525	SSF52218	Flavoproteins
Shal_3526	SSF46626	Cytochrome c
Shal_3528	SSF56935	Porins
Shal_3530	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3531	SSF116726	TrkA C-terminal domain-like
Shal_3532	SSF50447	Translation proteins
Shal_3532	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Shal_3532	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3533	SSF52402	Adenine nucleotide alpha hydrolases-like
Shal_3534	SSF53790	Tetrapyrrole methylase
Shal_3535	SSF56931	Outer membrane phospholipase A (OMPLA)
Shal_3536	SSF52096	ClpP/crotonase
Shal_3537	SSF56112	Protein kinase-like (PK-like)
Shal_3538	SSF52833	Thioredoxin-like
Shal_3541	SSF52402	Adenine nucleotide alpha hydrolases-like
Shal_3542	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
Shal_3542	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
Shal_3543	SSF52218	Flavoproteins
Shal_3543	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Shal_3543	SSF63380	Riboflavin synthase domain-like
Shal_3544	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_3544	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Shal_3546	SSF52467	DHS-like NAD/FAD-binding domain
Shal_3548	SSF46689	Homeodomain-like
Shal_3550	SSF52374	Nucleotidylyl transferase
Shal_3550	SSF53613	Ribokinase-like
Shal_3552	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Shal_3552	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Shal_3554	SSF81442	Cytochrome c oxidase subunit I-like
Shal_3555	SSF46689	Homeodomain-like
Shal_3555	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3555	SSF55781	GAF domain-like
Shal_3558	SSF63411	LuxS/MPP-like metallohydrolase
Shal_3559	SSF53067	Actin-like ATPase domain
Shal_3561	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Shal_3563	SSF46785	"Winged helix" DNA-binding domain
Shal_3563	SSF53850	Periplasmic binding protein-like II
Shal_3565	SSF52058	L domain-like
Shal_3569	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_3572	SSF81301	Nucleotidyltransferase
Shal_3572	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
Shal_3575	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_3580	SSF81324	Voltage-gated potassium channels
Shal_3581	SSF55154	CYTH-like phosphatases
Shal_3582	SSF109755	PhoU-like
Shal_3585	SSF51730	FAD-linked oxidoreductase
Shal_3585	SSF53720	ALDH-like
Shal_3585	SSF81935	N-terminal domain of bifunctional PutA protein
Shal_3586	SSF103190	Sensory domain-like
Shal_3586	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shal_3587	SSF103190	Sensory domain-like
Shal_3587	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shal_3588	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3588	SSF90123	ABC transporter transmembrane region
Shal_3589	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3589	SSF90123	ABC transporter transmembrane region
Shal_3591	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3592	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3595	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3597	SSF51905	FAD/NAD(P)-binding domain
Shal_3599	SSF53474	alpha/beta-Hydrolases
Shal_3600	SSF118001	YehU-like
Shal_3601	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3602	SSF81901	HCP-like
Shal_3603	SSF46785	"Winged helix" DNA-binding domain
Shal_3603	SSF51206	cAMP-binding domain-like
Shal_3605	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_3605	SSF52172	CheY-like
Shal_3606	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_3606	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_3608	SSF53720	ALDH-like
Shal_3609	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_3610	SSF53383	PLP-dependent transferases
Shal_3611	SSF109604	HD-domain/PDEase-like
Shal_3612	SSF53474	alpha/beta-Hydrolases
Shal_3612	SSF82171	DPP6 N-terminal domain-like
Shal_3613	SSF52317	Class I glutamine amidotransferase-like
Shal_3614	SSF48452	TPR-like
Shal_3615	SSF74653	TolA/TonB C-terminal domain
Shal_3622	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3623	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Shal_3624	SSF53807	"Helical backbone" metal receptor
Shal_3625	SSF56935	Porins
Shal_3626	SSF101738	SspB-like
Shal_3627	SSF47616	GST C-terminal domain-like
Shal_3627	SSF52833	Thioredoxin-like
Shal_3628	SSF46626	Cytochrome c
Shal_3629	SSF81342	Transmembrane di-heme cytochromes
Shal_3629	SSF81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Shal_3630	SSF50022	ISP domain
Shal_3631	SSF117892	Band 7/SPFH domain
Shal_3632	SSF117892	Band 7/SPFH domain
Shal_3633	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3633	SSF54980	EF-G C-terminal domain-like
Shal_3634	SSF50182	Sm-like ribonucleoproteins
Shal_3635	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3636	SSF118116	DNA mismatch repair protein MutL
Shal_3636	SSF54211	Ribosomal protein S5 domain 2-like
Shal_3636	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_3637	SSF53187	Zn-dependent exopeptidases
Shal_3637	SSF54106	LysM domain
Shal_3638	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3639	SSF53613	Ribokinase-like
Shal_3639	SSF64153	YjeF N-terminal domain-like
Shal_3641	SSF53098	Ribonuclease H-like
Shal_3642	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3644	SSF103481	Multidrug resistance efflux transporter EmrE
Shal_3645	SSF50182	Sm-like ribonucleoproteins
Shal_3645	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
Shal_3645	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
Shal_3646	SSF51695	PLC-like phosphodiesterases
Shal_3648	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_3648	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Shal_3650	SSF101904	GyrA/ParC C-terminal domain-like
Shal_3650	SSF56719	Type II DNA topoisomerase
Shal_3651	SSF50952	Soluble quinoprotein glucose dehydrogenase
Shal_3652	SSF54211	Ribosomal protein S5 domain 2-like
Shal_3652	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_3652	SSF56719	Type II DNA topoisomerase
Shal_3653	SSF53474	alpha/beta-Hydrolases
Shal_3654	SSF56300	Metallo-dependent phosphatases
Shal_3656	SSF55811	Nudix
Shal_3657	SSF56954	Outer membrane efflux proteins (OEP)
Shal_3660	SSF110087	DR1885-like metal-binding protein
Shal_3661	SSF52096	ClpP/crotonase
Shal_3664	SSF51395	FMN-linked oxidoreductases
Shal_3665	SSF46785	"Winged helix" DNA-binding domain
Shal_3665	SSF53850	Periplasmic binding protein-like II
Shal_3666	SSF46785	"Winged helix" DNA-binding domain
Shal_3666	SSF53850	Periplasmic binding protein-like II
Shal_3667	SSF48695	Multiheme cytochromes
Shal_3669	SSF50621	Alanine racemase C-terminal domain-like
Shal_3669	SSF51419	PLP-binding barrel
Shal_3670	SSF48024	N-terminal domain of DnaB helicase
Shal_3670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3671	SSF50494	Trypsin-like serine proteases
Shal_3672	SSF55653	Ribosomal protein L9 C-domain
Shal_3672	SSF55658	L9 N-domain-like
Shal_3673	SSF46911	Ribosomal protein S18
Shal_3674	SSF50249	Nucleic acid-binding proteins
Shal_3675	SSF54995	Ribosomal protein S6
Shal_3677	SSF55315	L30e-like
Shal_3677	SSF75217	alpha/beta knot
Shal_3678	SSF50249	Nucleic acid-binding proteins
Shal_3679	SSF81901	HCP-like
Shal_3680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3682	SSF54211	Ribosomal protein S5 domain 2-like
Shal_3683	SSF52161	Ribosomal protein L13
Shal_3684	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3686	SSF50156	PDZ domain-like
Shal_3686	SSF50494	Trypsin-like serine proteases
Shal_3687	SSF50156	PDZ domain-like
Shal_3687	SSF50494	Trypsin-like serine proteases
Shal_3689	SSF48695	Multiheme cytochromes
Shal_3690	SSF46785	"Winged helix" DNA-binding domain
Shal_3690	SSF52172	CheY-like
Shal_3691	SSF103473	MFS general substrate transporter
Shal_3691	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_3691	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_3692	SSF55205	EPT/RTPC-like
Shal_3693	SSF82657	BolA-like
Shal_3694	SSF52091	SpoIIaa-like
Shal_3698	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3700	SSF53697	SIS domain
Shal_3701	SSF56784	HAD-like
Shal_3704	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3706	SSF69754	Ribosome binding protein Y (YfiA homologue)
Shal_3707	SSF55804	Phoshotransferase/anion transport protein
Shal_3708	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3709	SSF55594	HPr-like
Shal_3710	SSF158791	MgtE N-terminal domain-like
Shal_3710	SSF161093	MgtE membrane domain-like
Shal_3710	SSF54631	CBS-domain pair
Shal_3711	SSF53850	Periplasmic binding protein-like II
Shal_3712	SSF103088	OmpA-like
Shal_3715	SSF69318	Integrin alpha N-terminal domain
Shal_3716	SSF53474	alpha/beta-Hydrolases
Shal_3717	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_3718	SSF103473	MFS general substrate transporter
Shal_3719	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_3720	SSF50331	MOP-like
Shal_3722	SSF53146	Nitrogenase accessory factor-like
Shal_3724	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3725	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3726	SSF161098	MetI-like
Shal_3727	SSF161098	MetI-like
Shal_3728	SSF53850	Periplasmic binding protein-like II
Shal_3729	SSF47598	Ribbon-helix-helix
Shal_3729	SSF55021	ACT-like
Shal_3730	SSF46689	Homeodomain-like
Shal_3734	SSF50891	Cyclophilin-like
Shal_3735	SSF53383	PLP-dependent transferases
Shal_3736	SSF141868	EAL domain-like
Shal_3736	SSF55073	Nucleotide cyclase
Shal_3737	SSF53850	Periplasmic binding protein-like II
Shal_3738	SSF51197	Clavaminate synthase-like
Shal_3739	SSF51905	FAD/NAD(P)-binding domain
Shal_3740	SSF52218	Flavoproteins
Shal_3740	SSF56281	Metallo-hydrolase/oxidoreductase
Shal_3740	SSF57802	Rubredoxin-like
Shal_3741	SSF48695	Multiheme cytochromes
Shal_3742	SSF46689	Homeodomain-like
Shal_3742	SSF51215	Regulatory protein AraC
Shal_3743	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Shal_3744	SSF53383	PLP-dependent transferases
Shal_3745	SSF51055	Carbohydrate binding domain
Shal_3745	SSF51445	(Trans)glycosidases
Shal_3747	SSF111369	HlyD-like secretion proteins
Shal_3751	SSF54631	CBS-domain pair
Shal_3751	SSF56176	FAD-binding/transporter-associated domain-like
Shal_3752	SSF52402	Adenine nucleotide alpha hydrolases-like
Shal_3755	SSF109604	HD-domain/PDEase-like
Shal_3755	SSF53850	Periplasmic binding protein-like II
Shal_3756	SSF51182	RmlC-like cupins
Shal_3759	SSF141571	Pentapeptide repeat-like
Shal_3760	SSF55021	ACT-like
Shal_3762	SSF51338	Composite domain of metallo-dependent hydrolases
Shal_3762	SSF51556	Metallo-dependent hydrolases
Shal_3763	SSF54631	CBS-domain pair
Shal_3763	SSF56176	FAD-binding/transporter-associated domain-like
Shal_3765	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
Shal_3765	SSF56300	Metallo-dependent phosphatases
Shal_3766	SSF55073	Nucleotide cyclase
Shal_3766	SSF55785	PYP-like sensor domain (PAS domain)
Shal_3767	SSF46565	Chaperone J-domain
Shal_3767	SSF49493	HSP40/DnaJ peptide-binding domain
Shal_3769	SSF143422	Transposase IS200-like
Shal_3770	SSF56349	DNA breaking-rejoining enzymes
Shal_3773	SSF46689	Homeodomain-like
Shal_3773	SSF53041	Resolvase-like
Shal_3776	SSF48592	GroEL equatorial domain-like
Shal_3776	SSF52029	GroEL apical domain-like
Shal_3776	SSF54849	GroEL-intermediate domain like
Shal_3777	SSF50129	GroES-like
Shal_3779	SSF141571	Pentapeptide repeat-like
Shal_3780	SSF46626	Cytochrome c
Shal_3781	SSF46785	"Winged helix" DNA-binding domain
Shal_3781	SSF53850	Periplasmic binding protein-like II
Shal_3782	SSF111369	HlyD-like secretion proteins
Shal_3783	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shal_3783	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shal_3783	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_3788	SSF55486	Metalloproteases ("zincins"), catalytic domain
Shal_3789	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_3789	SSF52172	CheY-like
Shal_3789	SSF55785	PYP-like sensor domain (PAS domain)
Shal_3789	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_3790	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3790	SSF88723	PIN domain-like
Shal_3791	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3794	SSF52096	ClpP/crotonase
Shal_3795	SSF103039	CheC-like
Shal_3795	SSF52172	CheY-like
Shal_3796	SSF55073	Nucleotide cyclase
Shal_3796	SSF55785	PYP-like sensor domain (PAS domain)
Shal_3797	SSF89946	Hypothetical protein VC0424
Shal_3798	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Shal_3799	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Shal_3800	SSF53807	"Helical backbone" metal receptor
Shal_3801	SSF56935	Porins
Shal_3805	SSF50182	Sm-like ribonucleoproteins
Shal_3805	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
Shal_3805	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
Shal_3806	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3807	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Shal_3815	SSF52172	CheY-like
Shal_3816	SSF47729	IHF-like DNA-binding proteins
Shal_3820	SSF103473	MFS general substrate transporter
Shal_3821	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_3821	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Shal_3823	SSF46785	"Winged helix" DNA-binding domain
Shal_3824	SSF53474	alpha/beta-Hydrolases
Shal_3825	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
Shal_3826	SSF158710	PSPTO4464-like
Shal_3827	SSF49373	Invasin/intimin cell-adhesion fragments
Shal_3830	SSF111369	HlyD-like secretion proteins
Shal_3831	SSF56954	Outer membrane efflux proteins (OEP)
Shal_3832	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
Shal_3833	SSF56317	Carbon-nitrogen hydrolase
Shal_3835	SSF50249	Nucleic acid-binding proteins
Shal_3836	SSF52972	ITPase-like
Shal_3839	SSF53067	Actin-like ATPase domain
Shal_3840	SSF56988	Anthrax protective antigen
Shal_3844	SSF54523	Pili subunits
Shal_3845	SSF54523	Pili subunits
Shal_3846	SSF54523	Pili subunits
Shal_3847	SSF54523	Pili subunits
Shal_3850	SSF160246	EspE N-terminal domain-like
Shal_3850	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3851	SSF48452	TPR-like
Shal_3852	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3857	SSF53067	Actin-like ATPase domain
Shal_3858	SSF141868	EAL domain-like
Shal_3858	SSF55073	Nucleotide cyclase
Shal_3859	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_3859	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Shal_3860	SSF50199	Staphylococcal nuclease
Shal_3861	SSF143800	L28p-like
Shal_3863	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3864	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Shal_3864	SSF52374	Nucleotidylyl transferase
Shal_3864	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
Shal_3865	SSF110997	Sporulation related repeat
Shal_3866	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Shal_3867	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3869	SSF53167	Purine and uridine phosphorylases
Shal_3870	SSF103473	MFS general substrate transporter
Shal_3871	SSF51206	cAMP-binding domain-like
Shal_3872	SSF52317	Class I glutamine amidotransferase-like
Shal_3873	SSF56796	Dehydroquinate synthase-like
Shal_3874	SSF53720	ALDH-like
Shal_3875	SSF55931	Glutamine synthetase/guanido kinase
Shal_3877	SSF89562	RraA-like
Shal_3878	SSF52768	Arginase/deacetylase
Shal_3879	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_3880	SSF55718	SCP-like
Shal_3881	SSF56112	Protein kinase-like (PK-like)
Shal_3886	SSF51556	Metallo-dependent hydrolases
Shal_3887	SSF55073	Nucleotide cyclase
Shal_3888	SSF51569	Aldolase
Shal_3889	SSF52833	Thioredoxin-like
Shal_3890	SSF49452	Starch-binding domain-like
Shal_3890	SSF56935	Porins
Shal_3891	SSF53067	Actin-like ATPase domain
Shal_3892	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3893	SSF52833	Thioredoxin-like
Shal_3894	SSF50249	Nucleic acid-binding proteins
Shal_3894	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3894	SSF68912	Rho N-terminal domain-like
Shal_3895	SSF46785	"Winged helix" DNA-binding domain
Shal_3895	SSF53850	Periplasmic binding protein-like II
Shal_3896	SSF46548	alpha-helical ferredoxin
Shal_3896	SSF54292	2Fe-2S ferredoxin-like
Shal_3897	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
Shal_3897	SSF51905	FAD/NAD(P)-binding domain
Shal_3897	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Shal_3898	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
Shal_3899	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
Shal_3900	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_3901	SSF51395	FMN-linked oxidoreductases
Shal_3902	SSF46689	Homeodomain-like
Shal_3903	SSF52949	Macro domain-like
Shal_3903	SSF53187	Zn-dependent exopeptidases
Shal_3904	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shal_3904	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shal_3904	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_3905	SSF51230	Single hybrid motif
Shal_3906	SSF56954	Outer membrane efflux proteins (OEP)
Shal_3909	SSF56784	HAD-like
Shal_3910	SSF47823	lambda integrase-like, N-terminal domain
Shal_3910	SSF56349	DNA breaking-rejoining enzymes
Shal_3912	SSF54506	Diaminopimelate epimerase-like
Shal_3913	SSF50621	Alanine racemase C-terminal domain-like
Shal_3913	SSF51419	PLP-binding barrel
Shal_3915	SSF55387	Frataxin/Nqo15-like
Shal_3917	SSF53850	Periplasmic binding protein-like II
Shal_3917	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
Shal_3918	SSF69618	HemD-like
Shal_3920	SSF81901	HCP-like
Shal_3921	SSF51120	beta-Roll
Shal_3922	SSF49313	Cadherin-like
Shal_3922	SSF51120	beta-Roll
Shal_3922	SSF53300	vWA-like
Shal_3923	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3923	SSF90123	ABC transporter transmembrane region
Shal_3924	SSF111369	HlyD-like secretion proteins
Shal_3925	SSF56954	Outer membrane efflux proteins (OEP)
Shal_3926	SSF103088	OmpA-like
Shal_3928	SSF141868	EAL domain-like
Shal_3928	SSF158472	HAMP domain-like
Shal_3928	SSF55073	Nucleotide cyclase
Shal_3929	SSF141868	EAL domain-like
Shal_3929	SSF55073	Nucleotide cyclase
Shal_3929	SSF55781	GAF domain-like
Shal_3930	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3931	SSF46689	Homeodomain-like
Shal_3932	SSF111369	HlyD-like secretion proteins
Shal_3933	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Shal_3933	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Shal_3933	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Shal_3935	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
Shal_3936	SSF46785	"Winged helix" DNA-binding domain
Shal_3936	SSF54909	Dimeric alpha+beta barrel
Shal_3937	SSF161070	SNF-like
Shal_3938	SSF56935	Porins
Shal_3939	SSF53383	PLP-dependent transferases
Shal_3940	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Shal_3940	SSF55021	ACT-like
Shal_3941	SSF143975	IlvD/EDD N-terminal domain-like
Shal_3941	SSF52016	LeuD/IlvD-like
Shal_3942	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
Shal_3943	SSF55021	ACT-like
Shal_3944	SSF52467	DHS-like NAD/FAD-binding domain
Shal_3944	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Shal_3945	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Shal_3945	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_3946	SSF46785	"Winged helix" DNA-binding domain
Shal_3946	SSF53850	Periplasmic binding protein-like II
Shal_3947	SSF55073	Nucleotide cyclase
Shal_3948	SSF46785	"Winged helix" DNA-binding domain
Shal_3948	SSF53850	Periplasmic binding protein-like II
Shal_3949	SSF46785	"Winged helix" DNA-binding domain
Shal_3950	SSF51905	FAD/NAD(P)-binding domain
Shal_3950	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Shal_3951	SSF48695	Multiheme cytochromes
Shal_3952	SSF48557	L-aspartase-like
Shal_3953	SSF55785	PYP-like sensor domain (PAS domain)
Shal_3953	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shal_3955	SSF52172	CheY-like
Shal_3956	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_3956	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_3959	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_3959	SSF54211	Ribosomal protein S5 domain 2-like
Shal_3960	SSF141868	EAL domain-like
Shal_3961	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Shal_3962	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Shal_3964	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
Shal_3965	SSF46689	Homeodomain-like
Shal_3966	SSF51905	FAD/NAD(P)-binding domain
Shal_3966	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Shal_3967	SSF48695	Multiheme cytochromes
Shal_3968	SSF56935	Porins
Shal_3969	SSF56935	Porins
Shal_3970	SSF51182	RmlC-like cupins
Shal_3973	SSF53474	alpha/beta-Hydrolases
Shal_3975	SSF53474	alpha/beta-Hydrolases
Shal_3976	SSF56925	OMPA-like
Shal_3980	SSF52833	Thioredoxin-like
Shal_3981	SSF56112	Protein kinase-like (PK-like)
Shal_3987	SSF52172	CheY-like
Shal_3987	SSF81606	PP2C-like
Shal_3988	SSF52091	SpoIIaa-like
Shal_3989	SSF51161	Trimeric LpxA-like enzymes
Shal_3989	SSF53448	Nucleotide-diphospho-sugar transferases
Shal_3990	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_3991	SSF53448	Nucleotide-diphospho-sugar transferases
Shal_3996	SSF53448	Nucleotide-diphospho-sugar transferases
Shal_3997	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Shal_4000	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Shal_4001	SSF56935	Porins
Shal_4002	SSF53850	Periplasmic binding protein-like II
Shal_4003	SSF47384	Homodimeric domain of signal transducing histidine kinase
Shal_4003	SSF52172	CheY-like
Shal_4003	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Shal_4005	SSF53474	alpha/beta-Hydrolases
Shal_4005	SSF82171	DPP6 N-terminal domain-like
Shal_4008	SSF50692	ADC-like
Shal_4008	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shal_4009	SSF54862	4Fe-4S ferredoxins
Shal_4010	SSF46785	"Winged helix" DNA-binding domain
Shal_4010	SSF53850	Periplasmic binding protein-like II
Shal_4011	SSF50692	ADC-like
Shal_4011	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shal_4012	SSF54862	4Fe-4S ferredoxins
Shal_4013	SSF89155	TorD-like
Shal_4014	SSF81342	Transmembrane di-heme cytochromes
Shal_4015	SSF56935	Porins
Shal_4016	SSF103190	Sensory domain-like
Shal_4016	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Shal_4018	SSF46785	"Winged helix" DNA-binding domain
Shal_4018	SSF53850	Periplasmic binding protein-like II
Shal_4019	SSF158442	DsbB-like
Shal_4019	SSF63829	Calcium-dependent phosphotriesterase
Shal_4020	SSF50692	ADC-like
Shal_4020	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Shal_4021	SSF54862	4Fe-4S ferredoxins
Shal_4022	SSF89155	TorD-like
Shal_4023	SSF81342	Transmembrane di-heme cytochromes
Shal_4024	SSF56935	Porins
Shal_4026	SSF102114	Radical SAM enzymes
Shal_4027	SSF161084	MAPEG domain-like
Shal_4031	SSF103481	Multidrug resistance efflux transporter EmrE
Shal_4032	SSF53474	alpha/beta-Hydrolases
Shal_4033	SSF50129	GroES-like
Shal_4033	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_4034	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Shal_4035	SSF51316	Mss4-like
Shal_4036	SSF56796	Dehydroquinate synthase-like
Shal_4037	SSF46785	"Winged helix" DNA-binding domain
Shal_4037	SSF53850	Periplasmic binding protein-like II
Shal_4038	SSF51905	FAD/NAD(P)-binding domain
Shal_4039	SSF102114	Radical SAM enzymes
Shal_4040	SSF111364	Tsx-like channel
Shal_4041	SSF53649	Alkaline phosphatase-like
Shal_4042	SSF53850	Periplasmic binding protein-like II
Shal_4043	SSF161098	MetI-like
Shal_4044	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_4044	SSF54631	CBS-domain pair
Shal_4045	SSF56935	Porins
Shal_4049	SSF46955	Putative DNA-binding domain
Shal_4050	SSF54001	Cysteine proteinases
Shal_4059	SSF56349	DNA breaking-rejoining enzymes
Shal_4060	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_4064	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_4066	SSF56349	DNA breaking-rejoining enzymes
Shal_4067	SSF53790	Tetrapyrrole methylase
Shal_4068	SSF53822	Periplasmic binding protein-like I
Shal_4069	SSF52980	Restriction endonuclease-like
Shal_4070	SSF53697	SIS domain
Shal_4072	SSF103481	Multidrug resistance efflux transporter EmrE
Shal_4073	SSF46785	"Winged helix" DNA-binding domain
Shal_4073	SSF53850	Periplasmic binding protein-like II
Shal_4074	SSF52374	Nucleotidylyl transferase
Shal_4075	SSF56784	HAD-like
Shal_4076	SSF51366	Ribulose-phoshate binding barrel
Shal_4079	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_4080	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_4081	SSF56796	Dehydroquinate synthase-like
Shal_4082	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_4087	SSF53067	Actin-like ATPase domain
Shal_4088	SSF53955	Lysozyme-like
Shal_4088	SSF56601	beta-lactamase/transpeptidase-like
Shal_4089	SSF48557	L-aspartase-like
Shal_4090	SSF52402	Adenine nucleotide alpha hydrolases-like
Shal_4090	SSF69864	Argininosuccinate synthetase, C-terminal domain
Shal_4091	SSF53671	Aspartate/ornithine carbamoyltransferase
Shal_4092	SSF53633	Carbamate kinase-like
Shal_4093	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_4093	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Shal_4094	SSF53187	Zn-dependent exopeptidases
Shal_4094	SSF55031	Bacterial exopeptidase dimerisation domain
Shal_4095	SSF51621	Phosphoenolpyruvate/pyruvate domain
Shal_4097	SSF142433	CinA-like
Shal_4097	SSF53218	Molybdenum cofactor biosynthesis proteins
Shal_4098	SSF52833	Thioredoxin-like
Shal_4100	SSF52833	Thioredoxin-like
Shal_4102	SSF48452	TPR-like
Shal_4103	SSF46626	Cytochrome c
Shal_4104	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_4108	SSF82093	Heme chaperone CcmE
Shal_4109	SSF64263	Prokaryotic ribosomal protein L17
Shal_4110	SSF47789	C-terminal domain of RNA polymerase alpha subunit
Shal_4110	SSF55257	RBP11-like subunits of RNA polymerase
Shal_4110	SSF56553	Insert subdomain of RNA polymerase alpha subunit
Shal_4111	SSF55174	Alpha-L RNA-binding motif
Shal_4112	SSF53137	Translational machinery components
Shal_4113	SSF46946	S13-like H2TH domain
Shal_4114	SSF103491	Preprotein translocase SecY subunit
Shal_4115	SSF52080	Ribosomal proteins L15p and L18e
Shal_4116	SSF55129	Ribosomal protein L30p/L7e
Shal_4117	SSF54211	Ribosomal protein S5 domain 2-like
Shal_4117	SSF54768	dsRNA-binding domain-like
Shal_4118	SSF53137	Translational machinery components
Shal_4119	SSF56053	Ribosomal protein L6
Shal_4120	SSF56047	Ribosomal protein S8
Shal_4121	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Shal_4122	SSF55282	RL5-like
Shal_4123	SSF50104	Translation proteins SH3-like domain
Shal_4124	SSF50193	Ribosomal protein L14
Shal_4125	SSF50249	Nucleic acid-binding proteins
Shal_4126	SSF46561	Ribosomal protein L29 (L29p)
Shal_4127	SSF54686	Ribosomal protein L16p/L10e
Shal_4128	SSF54814	Prokaryotic type KH domain (KH-domain type II)
Shal_4128	SSF54821	Ribosomal protein S3 C-terminal domain
Shal_4129	SSF54843	Ribosomal protein L22
Shal_4130	SSF54570	Ribosomal protein S19
Shal_4131	SSF50104	Translation proteins SH3-like domain
Shal_4131	SSF50249	Nucleic acid-binding proteins
Shal_4132	SSF54189	Ribosomal proteins S24e, L23 and L15e
Shal_4133	SSF52166	Ribosomal protein L4
Shal_4134	SSF50447	Translation proteins
Shal_4135	SSF54999	Ribosomal protein S10
Shal_4136	SSF50447	Translation proteins
Shal_4136	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Shal_4136	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_4137	SSF50447	Translation proteins
Shal_4137	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_4137	SSF54211	Ribosomal protein S5 domain 2-like
Shal_4137	SSF54980	EF-G C-terminal domain-like
Shal_4138	SSF47973	Ribosomal protein S7
Shal_4139	SSF50249	Nucleic acid-binding proteins
Shal_4140	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
Shal_4141	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
Shal_4142	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Shal_4142	SSF54736	ClpS-like
Shal_4143	SSF160369	Ribosomal protein L10-like
Shal_4144	SSF56808	Ribosomal protein L1
Shal_4145	SSF46906	Ribosomal protein L11, C-terminal domain
Shal_4145	SSF54747	Ribosomal L11/L12e N-terminal domain
Shal_4146	SSF50104	Translation proteins SH3-like domain
Shal_4146	SSF82679	N-utilization substance G protein NusG, N-terminal domain
Shal_4148	SSF50447	Translation proteins
Shal_4148	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Shal_4148	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_4149	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_4150	SSF46785	"Winged helix" DNA-binding domain
Shal_4150	SSF50037	C-terminal domain of transcriptional repressors
Shal_4150	SSF55681	Class II aaRS and biotin synthetases
Shal_4151	SSF56176	FAD-binding/transporter-associated domain-like
Shal_4151	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
Shal_4152	SSF54928	RNA-binding domain, RBD
Shal_4153	SSF53681	Aspartate/glutamate racemase
Shal_4154	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_4155	SSF46689	Homeodomain-like
Shal_4157	SSF55326	PurM N-terminal domain-like
Shal_4157	SSF56042	PurM C-terminal domain-like
Shal_4158	SSF52821	Rhodanese/Cell cycle control phosphatase
Shal_4159	SSF103473	MFS general substrate transporter
Shal_4160	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Shal_4161	SSF56655	Carbohydrate phosphatase
Shal_4162	SSF55811	Nudix
Shal_4163	SSF56784	HAD-like
Shal_4165	SSF103054	General secretion pathway protein M, EpsM
Shal_4166	SSF53067	Actin-like ATPase domain
Shal_4167	SSF158544	GspK insert domain-like
Shal_4167	SSF54523	Pili subunits
Shal_4168	SSF54523	Pili subunits
Shal_4169	SSF54523	Pili subunits
Shal_4170	SSF54523	Pili subunits
Shal_4171	SSF54523	Pili subunits
Shal_4173	SSF160246	EspE N-terminal domain-like
Shal_4173	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_4175	SSF50156	PDZ domain-like
Shal_4176	SSF55174	Alpha-L RNA-binding motif
Shal_4177	SSF118352	HSP33 redox switch-like
Shal_4177	SSF64397	Hsp33 domain
Shal_4178	SSF53795	PEP carboxykinase-like
Shal_4178	SSF68923	PEP carboxykinase N-terminal domain
Shal_4180	SSF47413	lambda repressor-like DNA-binding domains
Shal_4181	SSF53187	Zn-dependent exopeptidases
Shal_4182	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_4184	SSF51306	LexA/Signal peptidase
Shal_4185	SSF82771	GIY-YIG endonuclease
Shal_4186	SSF50993	Peptidase/esterase 'gauge' domain
Shal_4186	SSF53474	alpha/beta-Hydrolases
Shal_4187	SSF55821	YrdC/RibB
Shal_4188	SSF141868	EAL domain-like
Shal_4188	SSF55073	Nucleotide cyclase
Shal_4188	SSF55785	PYP-like sensor domain (PAS domain)
Shal_4189	SSF47240	Ferritin-like
Shal_4190	SSF53218	Molybdenum cofactor biosynthesis proteins
Shal_4190	SSF63867	MoeA C-terminal domain-like
Shal_4190	SSF63882	MoeA N-terminal region -like
Shal_4191	SSF69572	Activating enzymes of the ubiquitin-like proteins
Shal_4192	SSF48403	Ankyrin repeat
Shal_4193	SSF56634	Heme-dependent catalase-like
Shal_4196	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Shal_4196	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Shal_4198	SSF51658	Xylose isomerase-like
Shal_4203	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Shal_4204	SSF53448	Nucleotide-diphospho-sugar transferases
Shal_4206	SSF53448	Nucleotide-diphospho-sugar transferases
Shal_4208	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Shal_4209	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Shal_4210	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Shal_4211	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Shal_4212	SSF56112	Protein kinase-like (PK-like)
Shal_4213	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Shal_4214	SSF46689	Homeodomain-like
Shal_4215	SSF53383	PLP-dependent transferases
Shal_4216	SSF50129	GroES-like
Shal_4216	SSF51735	NAD(P)-binding Rossmann-fold domains
Shal_4217	SSF52821	Rhodanese/Cell cycle control phosphatase
Shal_4218	SSF144091	Rhomboid-like
Shal_4219	SSF52317	Class I glutamine amidotransferase-like
Shal_4220	SSF47807	5' to 3' exonuclease, C-terminal subdomain
Shal_4220	SSF53098	Ribonuclease H-like
Shal_4220	SSF56672	DNA/RNA polymerases
Shal_4220	SSF88723	PIN domain-like
Shal_4221	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_4222	SSF46626	Cytochrome c
Shal_4223	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_4226	SSF102114	Radical SAM enzymes
Shal_4228	SSF53474	alpha/beta-Hydrolases
Shal_4230	SSF160544	EscU C-terminal domain-like
Shal_4234	SSF101801	Surface presentation of antigens (SPOA)
Shal_4235	SSF101801	Surface presentation of antigens (SPOA)
Shal_4236	SSF103088	OmpA-like
Shal_4237	SSF46689	Homeodomain-like
Shal_4237	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_4240	SSF48029	FliG
Shal_4242	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_4244	SSF140566	FlgN-like
Shal_4245	SSF101498	Anti-sigma factor FlgM
Shal_4250	SSF117143	Flagellar hook protein flgE
Shal_4251	SSF117143	Flagellar hook protein flgE
Shal_4252	SSF117143	Flagellar hook protein flgE
Shal_4256	SSF64518	Phase 1 flagellin
Shal_4257	SSF64518	Phase 1 flagellin
Shal_4260	SSF64518	Phase 1 flagellin
Shal_4262	SSF101116	Flagellar export chaperone FliS
Shal_4266	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Shal_4266	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Shal_4268	SSF103088	OmpA-like
Shal_4271	SSF54862	4Fe-4S ferredoxins
Shal_4273	SSF52096	ClpP/crotonase
Shal_4276	SSF53850	Periplasmic binding protein-like II
Shal_4277	SSF161098	MetI-like
Shal_4278	SSF161098	MetI-like
Shal_4279	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_4281	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
Shal_4282	SSF46894	C-terminal effector domain of the bipartite response regulators
Shal_4284	SSF69754	Ribosome binding protein Y (YfiA homologue)
Shal_4285	SSF53697	SIS domain
Shal_4285	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Shal_4286	SSF100950	NagB/RpiA/CoA transferase-like
Shal_4286	SSF46785	"Winged helix" DNA-binding domain
Shal_4287	SSF56935	Porins
Shal_4288	SSF51161	Trimeric LpxA-like enzymes
Shal_4288	SSF53448	Nucleotide-diphospho-sugar transferases
Shal_4289	SSF75169	DsrEFH-like
Shal_4291	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_4293	SSF46604	Epsilon subunit of F1F0-ATP synthase C-terminal domain
Shal_4293	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
Shal_4294	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
Shal_4294	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
Shal_4294	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_4295	SSF52943	ATP synthase (F1-ATPase), gamma subunit
Shal_4296	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
Shal_4296	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
Shal_4296	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_4297	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
Shal_4298	SSF81573	F1F0 ATP synthase subunit B, membrane domain
Shal_4299	SSF81333	F1F0 ATP synthase subunit C
Shal_4300	SSF81336	F1F0 ATP synthase subunit A
Shal_4302	SSF110849	ParB/Sulfiredoxin
Shal_4303	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_4304	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Shal_4305	SSF51905	FAD/NAD(P)-binding domain
Shal_4306	SSF52218	Flavoproteins
Shal_4307	SSF53590	Nucleoside hydrolase
Shal_4308	SSF103642	Sec-C motif
Shal_4310	SSF116878	TrmE connector domain
Shal_4310	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Shal_4313	SSF54211	Ribosomal protein S5 domain 2-like