Swoo_0020	PWY-5136	fatty acid β-oxidation II (peroxisome)
Swoo_0020	PWY-6435	4-hydroxybenzoate biosynthesis V
Swoo_0020	PWY-6863	pyruvate fermentation to hexanol
Swoo_0020	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Swoo_0020	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Swoo_0020	PWY-6948	sitosterol degradation to androstenedione
Swoo_0020	PWY-7094	fatty acid salvage
Swoo_0020	PWY-7288	fatty acid β-oxidation (peroxisome, yeast)
Swoo_0020	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
Swoo_0020	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
Swoo_0020	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
Swoo_0020	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
Swoo_0020	PWY-735	jasmonic acid biosynthesis
Swoo_0021	PWY-1361	benzoyl-CoA degradation I (aerobic)
Swoo_0021	PWY-5109	2-methylbutanoate biosynthesis
Swoo_0021	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Swoo_0021	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
Swoo_0021	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Swoo_0021	PWY-5177	glutaryl-CoA degradation
Swoo_0021	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swoo_0021	PWY-6435	4-hydroxybenzoate biosynthesis V
Swoo_0021	PWY-6583	pyruvate fermentation to butanol I
Swoo_0021	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
Swoo_0021	PWY-6863	pyruvate fermentation to hexanol
Swoo_0021	PWY-6883	pyruvate fermentation to butanol II
Swoo_0021	PWY-6944	androstenedione degradation
Swoo_0021	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Swoo_0021	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Swoo_0021	PWY-7007	methyl ketone biosynthesis
Swoo_0021	PWY-7046	4-coumarate degradation (anaerobic)
Swoo_0021	PWY-7094	fatty acid salvage
Swoo_0021	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Swoo_0021	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
Swoo_0021	PWY-735	jasmonic acid biosynthesis
Swoo_0021	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Swoo_0045	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Swoo_0045	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Swoo_0047	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Swoo_0064	PWY-7378	aminopropanol phosphate biosynthesis II
Swoo_0082	PWY-6823	molybdenum cofactor biosynthesis
Swoo_0083	PWY-6823	molybdenum cofactor biosynthesis
Swoo_0084	PWY-5964	guanylyl molybdenum cofactor biosynthesis
Swoo_0093	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Swoo_0093	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Swoo_0093	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Swoo_0093	PWY-6406	salicylate biosynthesis I
Swoo_0109	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swoo_0109	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swoo_0121	PWY-4081	glutathione redox reactions I
Swoo_0156	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Swoo_0177	PWY-3781	aerobic respiration I (cytochrome c)
Swoo_0177	PWY-4521	arsenite oxidation I (respiratory)
Swoo_0177	PWY-6692	Fe(II) oxidation
Swoo_0177	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Swoo_0181	PWY-5667	CDP-diacylglycerol biosynthesis I
Swoo_0181	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
Swoo_0206	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Swoo_0206	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Swoo_0208	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Swoo_0208	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Swoo_0209	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Swoo_0209	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Swoo_0214	PWY-1361	benzoyl-CoA degradation I (aerobic)
Swoo_0214	PWY-5109	2-methylbutanoate biosynthesis
Swoo_0214	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Swoo_0214	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Swoo_0214	PWY-5177	glutaryl-CoA degradation
Swoo_0214	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swoo_0214	PWY-6435	4-hydroxybenzoate biosynthesis V
Swoo_0214	PWY-6583	pyruvate fermentation to butanol I
Swoo_0214	PWY-6863	pyruvate fermentation to hexanol
Swoo_0214	PWY-6883	pyruvate fermentation to butanol II
Swoo_0214	PWY-6944	androstenedione degradation
Swoo_0214	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Swoo_0214	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Swoo_0214	PWY-7007	methyl ketone biosynthesis
Swoo_0214	PWY-7046	4-coumarate degradation (anaerobic)
Swoo_0214	PWY-7094	fatty acid salvage
Swoo_0214	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Swoo_0214	PWY-735	jasmonic acid biosynthesis
Swoo_0214	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Swoo_0222	PWY-1361	benzoyl-CoA degradation I (aerobic)
Swoo_0222	PWY-2361	3-oxoadipate degradation
Swoo_0222	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Swoo_0227	PWY-1341	phenylacetate degradation II (anaerobic)
Swoo_0227	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Swoo_0229	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Swoo_0231	PWY-5674	nitrate reduction IV (dissimilatory)
Swoo_0285	PWY-5747	2-methylcitrate cycle II
Swoo_0287	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Swoo_0287	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Swoo_0295	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Swoo_0295	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Swoo_0295	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Swoo_0296	PWY-6123	inosine-5'-phosphate biosynthesis I
Swoo_0296	PWY-6124	inosine-5'-phosphate biosynthesis II
Swoo_0296	PWY-7234	inosine-5'-phosphate biosynthesis III
Swoo_0299	PWY-6502	oxidized GTP and dGTP detoxification
Swoo_0315	PWY-5316	nicotine biosynthesis
Swoo_0315	PWY-5381	pyridine nucleotide cycling (plants)
Swoo_0315	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Swoo_0315	PWY-7342	superpathway of nicotine biosynthesis
Swoo_0319	PWY-6891	thiazole biosynthesis II (Bacillus)
Swoo_0319	PWY-6892	thiazole biosynthesis I (E. coli)
Swoo_0319	PWY-7560	methylerythritol phosphate pathway II
Swoo_0321	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Swoo_0321	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Swoo_0327	PWY-1622	formaldehyde assimilation I (serine pathway)
Swoo_0327	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Swoo_0327	PWY-5913	TCA cycle VI (obligate autotrophs)
Swoo_0327	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Swoo_0327	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Swoo_0327	PWY-6549	L-glutamine biosynthesis III
Swoo_0327	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Swoo_0327	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Swoo_0327	PWY-7124	ethylene biosynthesis V (engineered)
Swoo_0328	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Swoo_0329	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Swoo_0329	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Swoo_0330	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Swoo_0330	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Swoo_0331	PWY-4981	L-proline biosynthesis II (from arginine)
Swoo_0331	PWY-4984	urea cycle
Swoo_0331	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Swoo_0332	PWY-4983	L-citrulline-nitric oxide cycle
Swoo_0332	PWY-4984	urea cycle
Swoo_0332	PWY-5	canavanine biosynthesis
Swoo_0332	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Swoo_0332	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Swoo_0333	PWY-4983	L-citrulline-nitric oxide cycle
Swoo_0333	PWY-4984	urea cycle
Swoo_0333	PWY-5	canavanine biosynthesis
Swoo_0333	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Swoo_0333	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Swoo_0340	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Swoo_0341	PWY-6164	3-dehydroquinate biosynthesis I
Swoo_0346	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Swoo_0346	PWY-5723	Rubisco shunt
Swoo_0347	PWY-181	photorespiration
Swoo_0350	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
Swoo_0368	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
Swoo_0373	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Swoo_0375	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Swoo_0375	PWY-3162	L-tryptophan degradation V (side chain pathway)
Swoo_0375	PWY-5057	L-valine degradation II
Swoo_0375	PWY-5076	L-leucine degradation III
Swoo_0375	PWY-5078	L-isoleucine degradation II
Swoo_0375	PWY-5079	L-phenylalanine degradation III
Swoo_0375	PWY-5082	L-methionine degradation III
Swoo_0375	PWY-5480	pyruvate fermentation to ethanol I
Swoo_0375	PWY-5486	pyruvate fermentation to ethanol II
Swoo_0375	PWY-5751	phenylethanol biosynthesis
Swoo_0375	PWY-6028	acetoin degradation
Swoo_0375	PWY-6313	serotonin degradation
Swoo_0375	PWY-6333	acetaldehyde biosynthesis I
Swoo_0375	PWY-6342	noradrenaline and adrenaline degradation
Swoo_0375	PWY-6587	pyruvate fermentation to ethanol III
Swoo_0375	PWY-6802	salidroside biosynthesis
Swoo_0375	PWY-6871	3-methylbutanol biosynthesis
Swoo_0375	PWY-7013	L-1,2-propanediol degradation
Swoo_0375	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Swoo_0375	PWY-7118	chitin degradation to ethanol
Swoo_0375	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Swoo_0375	PWY-7557	dehydrodiconiferyl alcohol degradation
Swoo_0376	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Swoo_0406	PWY-5057	L-valine degradation II
Swoo_0406	PWY-5076	L-leucine degradation III
Swoo_0406	PWY-5078	L-isoleucine degradation II
Swoo_0406	PWY-5101	L-isoleucine biosynthesis II
Swoo_0406	PWY-5103	L-isoleucine biosynthesis III
Swoo_0406	PWY-5104	L-isoleucine biosynthesis IV
Swoo_0406	PWY-5108	L-isoleucine biosynthesis V
Swoo_0432	PWY-3781	aerobic respiration I (cytochrome c)
Swoo_0432	PWY-4521	arsenite oxidation I (respiratory)
Swoo_0432	PWY-6692	Fe(II) oxidation
Swoo_0432	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Swoo_0432	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
Swoo_0438	PWY-6936	seleno-amino acid biosynthesis
Swoo_0438	PWY-7274	D-cycloserine biosynthesis
Swoo_0441	PWY-5101	L-isoleucine biosynthesis II
Swoo_0441	PWY-5103	L-isoleucine biosynthesis III
Swoo_0441	PWY-5104	L-isoleucine biosynthesis IV
Swoo_0441	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Swoo_0442	PWY-5101	L-isoleucine biosynthesis II
Swoo_0442	PWY-5103	L-isoleucine biosynthesis III
Swoo_0442	PWY-5104	L-isoleucine biosynthesis IV
Swoo_0442	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Swoo_0442	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Swoo_0442	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Swoo_0442	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Swoo_0444	PWY-5057	L-valine degradation II
Swoo_0444	PWY-5076	L-leucine degradation III
Swoo_0444	PWY-5078	L-isoleucine degradation II
Swoo_0444	PWY-5101	L-isoleucine biosynthesis II
Swoo_0444	PWY-5103	L-isoleucine biosynthesis III
Swoo_0444	PWY-5104	L-isoleucine biosynthesis IV
Swoo_0444	PWY-5108	L-isoleucine biosynthesis V
Swoo_0445	PWY-5101	L-isoleucine biosynthesis II
Swoo_0445	PWY-5103	L-isoleucine biosynthesis III
Swoo_0445	PWY-5104	L-isoleucine biosynthesis IV
Swoo_0445	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Swoo_0447	PWY-6832	2-aminoethylphosphonate degradation II
Swoo_0482	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Swoo_0482	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Swoo_0483	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Swoo_0483	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Swoo_0486	PWY-2941	L-lysine biosynthesis II
Swoo_0486	PWY-2942	L-lysine biosynthesis III
Swoo_0486	PWY-5097	L-lysine biosynthesis VI
Swoo_0487	PWY-2941	L-lysine biosynthesis II
Swoo_0487	PWY-5097	L-lysine biosynthesis VI
Swoo_0509	PWY-3781	aerobic respiration I (cytochrome c)
Swoo_0509	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Swoo_0509	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Swoo_0509	PWY-5690	TCA cycle II (plants and fungi)
Swoo_0509	PWY-6728	methylaspartate cycle
Swoo_0509	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swoo_0509	PWY-7254	TCA cycle VII (acetate-producers)
Swoo_0509	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Swoo_0510	PWY-3781	aerobic respiration I (cytochrome c)
Swoo_0510	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Swoo_0510	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Swoo_0510	PWY-5690	TCA cycle II (plants and fungi)
Swoo_0510	PWY-6728	methylaspartate cycle
Swoo_0510	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swoo_0510	PWY-7254	TCA cycle VII (acetate-producers)
Swoo_0510	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Swoo_0512	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Swoo_0518	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Swoo_0518	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Swoo_0527	PWY-5839	menaquinol-7 biosynthesis
Swoo_0527	PWY-5844	menaquinol-9 biosynthesis
Swoo_0527	PWY-5849	menaquinol-6 biosynthesis
Swoo_0527	PWY-5890	menaquinol-10 biosynthesis
Swoo_0527	PWY-5891	menaquinol-11 biosynthesis
Swoo_0527	PWY-5892	menaquinol-12 biosynthesis
Swoo_0527	PWY-5895	menaquinol-13 biosynthesis
Swoo_0546	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Swoo_0546	PWY-6416	quinate degradation II
Swoo_0546	PWY-6707	gallate biosynthesis
Swoo_0561	PWY-6902	chitin degradation II
Swoo_0623	PWY-2941	L-lysine biosynthesis II
Swoo_0623	PWY-2942	L-lysine biosynthesis III
Swoo_0623	PWY-5097	L-lysine biosynthesis VI
Swoo_0623	PWY-6559	spermidine biosynthesis II
Swoo_0623	PWY-6562	norspermidine biosynthesis
Swoo_0623	PWY-7153	grixazone biosynthesis
Swoo_0624	PWY-2201	folate transformations I
Swoo_0624	PWY-3841	folate transformations II
Swoo_0651	PWY-2723	trehalose degradation V
Swoo_0651	PWY-6317	galactose degradation I (Leloir pathway)
Swoo_0651	PWY-6737	starch degradation V
Swoo_0652	PWY-3821	galactose degradation III
Swoo_0652	PWY-6317	galactose degradation I (Leloir pathway)
Swoo_0652	PWY-6527	stachyose degradation
Swoo_0668	PWY-5723	Rubisco shunt
Swoo_0697	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Swoo_0714	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Swoo_0714	PWY-6853	ethylene biosynthesis II (microbes)
Swoo_0714	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Swoo_0761	PWY-3781	aerobic respiration I (cytochrome c)
Swoo_0761	PWY-4521	arsenite oxidation I (respiratory)
Swoo_0761	PWY-6692	Fe(II) oxidation
Swoo_0761	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Swoo_0776	PWY-6683	sulfate reduction III (assimilatory)
Swoo_0777	PWY-6683	sulfate reduction III (assimilatory)
Swoo_0786	PWY-6803	phosphatidylcholine acyl editing
Swoo_0786	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
Swoo_0786	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
Swoo_0786	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
Swoo_0787	PWY-5194	siroheme biosynthesis
Swoo_0787	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Swoo_0814	PWY-7533	gliotoxin biosynthesis
Swoo_0845	PWY-7533	gliotoxin biosynthesis
Swoo_0859	PWY-6823	molybdenum cofactor biosynthesis
Swoo_0859	PWY-6891	thiazole biosynthesis II (Bacillus)
Swoo_0859	PWY-6892	thiazole biosynthesis I (E. coli)
Swoo_0859	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Swoo_0875	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Swoo_0875	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Swoo_0876	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Swoo_0876	PWY-5723	Rubisco shunt
Swoo_0876	PWY-6891	thiazole biosynthesis II (Bacillus)
Swoo_0876	PWY-6892	thiazole biosynthesis I (E. coli)
Swoo_0876	PWY-6901	superpathway of glucose and xylose degradation
Swoo_0876	PWY-7560	methylerythritol phosphate pathway II
Swoo_0878	PWY-1042	glycolysis IV (plant cytosol)
Swoo_0878	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swoo_0878	PWY-6886	1-butanol autotrophic biosynthesis
Swoo_0878	PWY-6901	superpathway of glucose and xylose degradation
Swoo_0878	PWY-7003	glycerol degradation to butanol
Swoo_0879	PWY-1042	glycolysis IV (plant cytosol)
Swoo_0879	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Swoo_0879	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swoo_0879	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Swoo_0879	PWY-7385	1,3-propanediol biosynthesis (engineered)
Swoo_0935	PWY-4261	glycerol degradation I
Swoo_0935	PWY-6118	glycerol-3-phosphate shuttle
Swoo_0935	PWY-6952	glycerophosphodiester degradation
Swoo_0937	PWY-1881	formate oxidation to CO<sub>2</sub>
Swoo_0937	PWY-5497	purine nucleobases degradation II (anaerobic)
Swoo_0937	PWY-6696	oxalate degradation III
Swoo_0943	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Swoo_0943	PWY-6855	chitin degradation I (archaea)
Swoo_0943	PWY-6906	chitin derivatives degradation
Swoo_0955	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Swoo_0955	PWY-5723	Rubisco shunt
Swoo_0972	PWY-5674	nitrate reduction IV (dissimilatory)
Swoo_0986	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Swoo_0986	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Swoo_0986	PWY-6164	3-dehydroquinate biosynthesis I
Swoo_0999	PWY-4041	&gamma;-glutamyl cycle
Swoo_0999	PWY-5826	hypoglycin biosynthesis
Swoo_1002	PWY-1622	formaldehyde assimilation I (serine pathway)
Swoo_1002	PWY-5392	reductive TCA cycle II
Swoo_1002	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Swoo_1002	PWY-5690	TCA cycle II (plants and fungi)
Swoo_1002	PWY-5913	TCA cycle VI (obligate autotrophs)
Swoo_1002	PWY-6728	methylaspartate cycle
Swoo_1002	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swoo_1002	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Swoo_1002	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Swoo_1009	PWY-3841	folate transformations II
Swoo_1009	PWY-6614	tetrahydrofolate biosynthesis
Swoo_1051	PWY-7310	D-glucosaminate degradation
Swoo_1068	PWY-6854	ethylene biosynthesis III (microbes)
Swoo_1076	PWY-5988	wound-induced proteolysis I
Swoo_1076	PWY-6018	seed germination protein turnover
Swoo_1100	PWY-6902	chitin degradation II
Swoo_1101	PWY-6902	chitin degradation II
Swoo_1112	PWY-5692	allantoin degradation to glyoxylate II
Swoo_1112	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
Swoo_1113	PWY-5642	2,4-dinitrotoluene degradation
Swoo_1113	PWY-6373	acrylate degradation
Swoo_1121	PWY-6609	adenine and adenosine salvage III
Swoo_1121	PWY-6611	adenine and adenosine salvage V
Swoo_1121	PWY-7179	purine deoxyribonucleosides degradation I
Swoo_1121	PWY-7179-1	purine deoxyribonucleosides degradation
Swoo_1130	PWY-381	nitrate reduction II (assimilatory)
Swoo_1130	PWY-5675	nitrate reduction V (assimilatory)
Swoo_1130	PWY-6549	L-glutamine biosynthesis III
Swoo_1130	PWY-6963	ammonia assimilation cycle I
Swoo_1130	PWY-6964	ammonia assimilation cycle II
Swoo_1147	PWY-3121	linamarin degradation
Swoo_1147	PWY-5176	coumarin biosynthesis (via 2-coumarate)
Swoo_1147	PWY-6002	lotaustralin degradation
Swoo_1147	PWY-6788	cellulose degradation II (fungi)
Swoo_1147	PWY-7089	taxiphyllin bioactivation
Swoo_1147	PWY-7091	linustatin bioactivation
Swoo_1147	PWY-7092	neolinustatin bioactivation
Swoo_1159	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Swoo_1159	PWY-6148	tetrahydromethanopterin biosynthesis
Swoo_1159	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Swoo_1159	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Swoo_1160	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Swoo_1160	PWY-6148	tetrahydromethanopterin biosynthesis
Swoo_1160	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Swoo_1160	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Swoo_1171	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Swoo_1172	PWY-5686	UMP biosynthesis
Swoo_1178	PWY-5392	reductive TCA cycle II
Swoo_1178	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Swoo_1178	PWY-5690	TCA cycle II (plants and fungi)
Swoo_1178	PWY-5913	TCA cycle VI (obligate autotrophs)
Swoo_1178	PWY-6728	methylaspartate cycle
Swoo_1178	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swoo_1178	PWY-7254	TCA cycle VII (acetate-producers)
Swoo_1178	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Swoo_1196	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Swoo_1196	PWY-7494	choline degradation IV
Swoo_1207	PWY-5491	diethylphosphate degradation
Swoo_1217	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Swoo_1217	PWY-6153	autoinducer AI-2 biosynthesis I
Swoo_1217	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
Swoo_1230	PWY-3841	folate transformations II
Swoo_1230	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Swoo_1230	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swoo_1230	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Swoo_1230	PWY-7199	pyrimidine deoxyribonucleosides salvage
Swoo_1230	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Swoo_1236	PWY-5316	nicotine biosynthesis
Swoo_1236	PWY-7342	superpathway of nicotine biosynthesis
Swoo_1247	PWY-6012	acyl carrier protein metabolism I
Swoo_1247	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Swoo_1256	PWY-6829	tRNA methylation (yeast)
Swoo_1256	PWY-7285	methylwyosine biosynthesis
Swoo_1256	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Swoo_1258	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Swoo_1258	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Swoo_1258	PWY-6164	3-dehydroquinate biosynthesis I
Swoo_1259	PWY-3461	L-tyrosine biosynthesis II
Swoo_1259	PWY-3462	L-phenylalanine biosynthesis II
Swoo_1259	PWY-6120	L-tyrosine biosynthesis III
Swoo_1259	PWY-6627	salinosporamide A biosynthesis
Swoo_1259	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
Swoo_1263	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Swoo_1263	PWY-3461	L-tyrosine biosynthesis II
Swoo_1263	PWY-3462	L-phenylalanine biosynthesis II
Swoo_1263	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Swoo_1263	PWY-6120	L-tyrosine biosynthesis III
Swoo_1263	PWY-6627	salinosporamide A biosynthesis
Swoo_1263	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Swoo_1270	PWY-2941	L-lysine biosynthesis II
Swoo_1270	PWY-2942	L-lysine biosynthesis III
Swoo_1270	PWY-5097	L-lysine biosynthesis VI
Swoo_1270	PWY-6559	spermidine biosynthesis II
Swoo_1270	PWY-6562	norspermidine biosynthesis
Swoo_1270	PWY-7153	grixazone biosynthesis
Swoo_1271	PWY-702	L-methionine biosynthesis II
Swoo_1279	PWY-3801	sucrose degradation II (sucrose synthase)
Swoo_1279	PWY-5054	sorbitol biosynthesis I
Swoo_1279	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Swoo_1279	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Swoo_1279	PWY-5659	GDP-mannose biosynthesis
Swoo_1279	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Swoo_1279	PWY-621	sucrose degradation III (sucrose invertase)
Swoo_1279	PWY-622	starch biosynthesis
Swoo_1279	PWY-6531	mannitol cycle
Swoo_1279	PWY-6981	chitin biosynthesis
Swoo_1279	PWY-7238	sucrose biosynthesis II
Swoo_1279	PWY-7347	sucrose biosynthesis III
Swoo_1279	PWY-7385	1,3-propanediol biosynthesis (engineered)
Swoo_1280	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Swoo_1280	PWY-5723	Rubisco shunt
Swoo_1290	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Swoo_1290	PWY-6167	flavin biosynthesis II (archaea)
Swoo_1290	PWY-6168	flavin biosynthesis III (fungi)
Swoo_1294	PWY-7560	methylerythritol phosphate pathway II
Swoo_1311	PWY-6902	chitin degradation II
Swoo_1313	PWY-6906	chitin derivatives degradation
Swoo_1313	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Swoo_1313	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Swoo_1327	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Swoo_1331	PWY-3341	L-proline biosynthesis III
Swoo_1331	PWY-4981	L-proline biosynthesis II (from arginine)
Swoo_1331	PWY-6344	L-ornithine degradation II (Stickland reaction)
Swoo_1332	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Swoo_1349	PWY-5491	diethylphosphate degradation
Swoo_1350	PWY-5491	diethylphosphate degradation
Swoo_1380	PWY-1622	formaldehyde assimilation I (serine pathway)
Swoo_1380	PWY-181	photorespiration
Swoo_1380	PWY-2161	folate polyglutamylation
Swoo_1380	PWY-2201	folate transformations I
Swoo_1380	PWY-3661	glycine betaine degradation I
Swoo_1380	PWY-3661-1	glycine betaine degradation II (mammalian)
Swoo_1380	PWY-3841	folate transformations II
Swoo_1380	PWY-5497	purine nucleobases degradation II (anaerobic)
Swoo_1383	PWY-6167	flavin biosynthesis II (archaea)
Swoo_1383	PWY-6168	flavin biosynthesis III (fungi)
Swoo_1383	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Swoo_1384	PWY-6167	flavin biosynthesis II (archaea)
Swoo_1384	PWY-6168	flavin biosynthesis III (fungi)
Swoo_1384	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Swoo_1385	PWY-6167	flavin biosynthesis II (archaea)
Swoo_1385	PWY-6168	flavin biosynthesis III (fungi)
Swoo_1387	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Swoo_1387	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Swoo_1387	PWY-6896	thiamin salvage I
Swoo_1387	PWY-6897	thiamin salvage II
Swoo_1388	PWY-5269	cardiolipin biosynthesis II
Swoo_1388	PWY-5668	cardiolipin biosynthesis I
Swoo_1390	PWY-5162	2-oxopentenoate degradation
Swoo_1391	PWY-5162	2-oxopentenoate degradation
Swoo_1391	PWY-5436	L-threonine degradation IV
Swoo_1391	PWY-5480	pyruvate fermentation to ethanol I
Swoo_1391	PWY-6587	pyruvate fermentation to ethanol III
Swoo_1391	PWY-7085	triethylamine degradation
Swoo_1391	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Swoo_1404	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Swoo_1404	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Swoo_1405	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Swoo_1405	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Swoo_1408	PWY-5647	2-nitrobenzoate degradation I
Swoo_1408	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Swoo_1408	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Swoo_1408	PWY-6505	L-tryptophan degradation XII (Geobacillus)
Swoo_1417	PWY-6523	nitrite-dependent anaerobic methane oxidation
Swoo_1417	PWY-6748	nitrate reduction VII (denitrification)
Swoo_1417	PWY-7084	nitrifier denitrification
Swoo_1420	PWY-4381	fatty acid biosynthesis initiation I
Swoo_1420	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Swoo_1420	PWY-723	alkylnitronates degradation
Swoo_1420	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Swoo_1421	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Swoo_1421	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Swoo_1421	PWY-5989	stearate biosynthesis II (bacteria and plants)
Swoo_1421	PWY-5994	palmitate biosynthesis I (animals and fungi)
Swoo_1421	PWY-6113	superpathway of mycolate biosynthesis
Swoo_1421	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Swoo_1421	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Swoo_1421	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Swoo_1421	PWYG-321	mycolate biosynthesis
Swoo_1436	PWY-2721	trehalose degradation III
Swoo_1436	PWY-2722	trehalose degradation IV
Swoo_1436	PWY-6317	galactose degradation I (Leloir pathway)
Swoo_1436	PWY-7459	kojibiose degradation
Swoo_1446	PWY-6019	pseudouridine degradation
Swoo_1447	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Swoo_1528	PWY-6728	methylaspartate cycle
Swoo_1528	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swoo_1528	PWY-7118	chitin degradation to ethanol
Swoo_1528	PWY-7294	xylose degradation IV
Swoo_1528	PWY-7295	L-arabinose degradation IV
Swoo_1544	PWY-7560	methylerythritol phosphate pathway II
Swoo_1551	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Swoo_1559	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Swoo_1559	PWY-6596	adenosine nucleotides degradation I
Swoo_1559	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Swoo_1560	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Swoo_1564	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Swoo_1564	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Swoo_1564	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Swoo_1567	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
Swoo_1578	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Swoo_1578	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Swoo_1582	PWY-6749	CMP-legionaminate biosynthesis I
Swoo_1582	PWY-7131	CMP-legionaminate biosynthesis II
Swoo_1621	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Swoo_1660	PWY-3821	galactose degradation III
Swoo_1660	PWY-6317	galactose degradation I (Leloir pathway)
Swoo_1660	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Swoo_1660	PWY-6527	stachyose degradation
Swoo_1660	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Swoo_1660	PWY-7344	UDP-D-galactose biosynthesis
Swoo_1662	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Swoo_1667	PWY-4381	fatty acid biosynthesis initiation I
Swoo_1669	PWY-4381	fatty acid biosynthesis initiation I
Swoo_1681	PWY-3221	dTDP-L-rhamnose biosynthesis II
Swoo_1681	PWY-6808	dTDP-D-forosamine biosynthesis
Swoo_1681	PWY-6942	dTDP-D-desosamine biosynthesis
Swoo_1681	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Swoo_1681	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Swoo_1681	PWY-6974	dTDP-L-olivose biosynthesis
Swoo_1681	PWY-6976	dTDP-L-mycarose biosynthesis
Swoo_1681	PWY-7104	dTDP-L-megosamine biosynthesis
Swoo_1681	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Swoo_1681	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Swoo_1681	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Swoo_1681	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Swoo_1681	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Swoo_1681	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Swoo_1681	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Swoo_1681	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Swoo_1683	PWY-3221	dTDP-L-rhamnose biosynthesis II
Swoo_1683	PWY-6808	dTDP-D-forosamine biosynthesis
Swoo_1683	PWY-6942	dTDP-D-desosamine biosynthesis
Swoo_1683	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Swoo_1683	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Swoo_1683	PWY-6974	dTDP-L-olivose biosynthesis
Swoo_1683	PWY-6976	dTDP-L-mycarose biosynthesis
Swoo_1683	PWY-7104	dTDP-L-megosamine biosynthesis
Swoo_1683	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Swoo_1683	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Swoo_1683	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Swoo_1683	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Swoo_1683	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Swoo_1683	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Swoo_1683	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Swoo_1683	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Swoo_1686	PWY-5278	sulfite oxidation III
Swoo_1686	PWY-5340	sulfate activation for sulfonation
Swoo_1686	PWY-6683	sulfate reduction III (assimilatory)
Swoo_1686	PWY-6932	selenate reduction
Swoo_1687	PWY-5278	sulfite oxidation III
Swoo_1687	PWY-5340	sulfate activation for sulfonation
Swoo_1687	PWY-6683	sulfate reduction III (assimilatory)
Swoo_1687	PWY-6932	selenate reduction
Swoo_1689	PWY-5340	sulfate activation for sulfonation
Swoo_1713	PWY-3821	galactose degradation III
Swoo_1713	PWY-6317	galactose degradation I (Leloir pathway)
Swoo_1713	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Swoo_1713	PWY-6527	stachyose degradation
Swoo_1713	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Swoo_1713	PWY-7344	UDP-D-galactose biosynthesis
Swoo_1714	PWY-3801	sucrose degradation II (sucrose synthase)
Swoo_1714	PWY-6527	stachyose degradation
Swoo_1714	PWY-6981	chitin biosynthesis
Swoo_1714	PWY-7238	sucrose biosynthesis II
Swoo_1714	PWY-7343	UDP-glucose biosynthesis
Swoo_1715	PWY-6134	L-tyrosine biosynthesis IV
Swoo_1715	PWY-7158	L-phenylalanine degradation V
Swoo_1716	PWY-7158	L-phenylalanine degradation V
Swoo_1728	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Swoo_1739	PWY-6339	syringate degradation
Swoo_1741	PWY-6339	syringate degradation
Swoo_1753	PWY-6012	acyl carrier protein metabolism I
Swoo_1755	PWY-6700	queuosine biosynthesis
Swoo_1762	PWY-5194	siroheme biosynthesis
Swoo_1762	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Swoo_1772	PWY-2301	<i>myo</i>-inositol biosynthesis
Swoo_1772	PWY-4702	phytate degradation I
Swoo_1772	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Swoo_1774	PWY-6936	seleno-amino acid biosynthesis
Swoo_1774	PWY-7274	D-cycloserine biosynthesis
Swoo_1776	PWY-6823	molybdenum cofactor biosynthesis
Swoo_1776	PWY-6891	thiazole biosynthesis II (Bacillus)
Swoo_1776	PWY-6892	thiazole biosynthesis I (E. coli)
Swoo_1776	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Swoo_1783	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Swoo_1783	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Swoo_1783	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Swoo_1783	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swoo_1783	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Swoo_1783	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Swoo_1783	PWY-7205	CMP phosphorylation
Swoo_1783	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Swoo_1783	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swoo_1783	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Swoo_1783	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swoo_1783	PWY-7224	purine deoxyribonucleosides salvage
Swoo_1783	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Swoo_1783	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Swoo_1792	PWY-6605	adenine and adenosine salvage II
Swoo_1792	PWY-6610	adenine and adenosine salvage IV
Swoo_1798	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Swoo_1807	PWY-6902	chitin degradation II
Swoo_1835	PWY-3781	aerobic respiration I (cytochrome c)
Swoo_1835	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Swoo_1835	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Swoo_1835	PWY-5690	TCA cycle II (plants and fungi)
Swoo_1835	PWY-6728	methylaspartate cycle
Swoo_1835	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swoo_1835	PWY-7254	TCA cycle VII (acetate-producers)
Swoo_1835	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Swoo_1836	PWY-3781	aerobic respiration I (cytochrome c)
Swoo_1836	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Swoo_1836	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Swoo_1836	PWY-5690	TCA cycle II (plants and fungi)
Swoo_1836	PWY-6728	methylaspartate cycle
Swoo_1836	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swoo_1836	PWY-7254	TCA cycle VII (acetate-producers)
Swoo_1836	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Swoo_1837	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Swoo_1838	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Swoo_1839	PWY-5392	reductive TCA cycle II
Swoo_1839	PWY-5537	pyruvate fermentation to acetate V
Swoo_1839	PWY-5538	pyruvate fermentation to acetate VI
Swoo_1839	PWY-5690	TCA cycle II (plants and fungi)
Swoo_1839	PWY-5913	TCA cycle VI (obligate autotrophs)
Swoo_1839	PWY-6728	methylaspartate cycle
Swoo_1839	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swoo_1839	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Swoo_1840	PWY-5392	reductive TCA cycle II
Swoo_1840	PWY-5537	pyruvate fermentation to acetate V
Swoo_1840	PWY-5538	pyruvate fermentation to acetate VI
Swoo_1840	PWY-5690	TCA cycle II (plants and fungi)
Swoo_1840	PWY-5913	TCA cycle VI (obligate autotrophs)
Swoo_1840	PWY-6728	methylaspartate cycle
Swoo_1840	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swoo_1840	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Swoo_1863	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Swoo_1863	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Swoo_1866	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Swoo_1869	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Swoo_1872	PWY-5194	siroheme biosynthesis
Swoo_1872	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Swoo_1875	PWY-6683	sulfate reduction III (assimilatory)
Swoo_1908	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swoo_1908	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swoo_1915	PWY-2723	trehalose degradation V
Swoo_1915	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Swoo_1915	PWY-5661	GDP-glucose biosynthesis
Swoo_1915	PWY-5940	streptomycin biosynthesis
Swoo_1915	PWY-621	sucrose degradation III (sucrose invertase)
Swoo_1915	PWY-622	starch biosynthesis
Swoo_1915	PWY-6731	starch degradation III
Swoo_1915	PWY-6737	starch degradation V
Swoo_1915	PWY-6981	chitin biosynthesis
Swoo_1915	PWY-7238	sucrose biosynthesis II
Swoo_1915	PWY-7343	UDP-glucose biosynthesis
Swoo_1929	PWY-4041	&gamma;-glutamyl cycle
Swoo_1929	PWY-5826	hypoglycin biosynthesis
Swoo_1954	PWY-5101	L-isoleucine biosynthesis II
Swoo_1954	PWY-5103	L-isoleucine biosynthesis III
Swoo_1954	PWY-5104	L-isoleucine biosynthesis IV
Swoo_1954	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Swoo_1954	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Swoo_1954	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Swoo_1954	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Swoo_1955	PWY-5101	L-isoleucine biosynthesis II
Swoo_1955	PWY-5103	L-isoleucine biosynthesis III
Swoo_1955	PWY-5104	L-isoleucine biosynthesis IV
Swoo_1955	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Swoo_1955	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Swoo_1955	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Swoo_1955	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Swoo_1979	PWY-7193	pyrimidine ribonucleosides salvage I
Swoo_1980	PWY-6543	4-aminobenzoate biosynthesis
Swoo_1980	PWY-6722	candicidin biosynthesis
Swoo_1982	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Swoo_1982	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Swoo_1982	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swoo_1982	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Swoo_1982	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Swoo_1982	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Swoo_1989	PWY-7039	phosphatidate metabolism, as a signaling molecule
Swoo_1993	PWY-5723	Rubisco shunt
Swoo_2007	PWY-3581	(<i>S</i>)-reticuline biosynthesis I
Swoo_2007	PWY-5254	methanofuran biosynthesis
Swoo_2007	PWY-5474	hydroxycinnamic acid tyramine amides biosynthesis
Swoo_2007	PWY-6133	(S)-reticuline biosynthesis II
Swoo_2007	PWY-6802	salidroside biosynthesis
Swoo_2007	PWY-7297	octopamine biosynthesis
Swoo_2040	PWY-4381	fatty acid biosynthesis initiation I
Swoo_2041	PWY-4381	fatty acid biosynthesis initiation I
Swoo_2041	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Swoo_2041	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Swoo_2042	PWY-5367	petroselinate biosynthesis
Swoo_2042	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Swoo_2042	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Swoo_2042	PWY-5989	stearate biosynthesis II (bacteria and plants)
Swoo_2042	PWY-5994	palmitate biosynthesis I (animals and fungi)
Swoo_2042	PWY-6113	superpathway of mycolate biosynthesis
Swoo_2042	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Swoo_2042	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Swoo_2042	PWY-6951	Swoo_2042
Swoo_2042	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Swoo_2042	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Swoo_2042	PWYG-321	mycolate biosynthesis
Swoo_2048	PWY-6556	pyrimidine ribonucleosides salvage II
Swoo_2048	PWY-7181	pyrimidine deoxyribonucleosides degradation
Swoo_2048	PWY-7193	pyrimidine ribonucleosides salvage I
Swoo_2048	PWY-7199	pyrimidine deoxyribonucleosides salvage
Swoo_2057	PWY-40	putrescine biosynthesis I
Swoo_2057	PWY-43	putrescine biosynthesis II
Swoo_2057	PWY-6305	putrescine biosynthesis IV
Swoo_2057	PWY-6834	spermidine biosynthesis III
Swoo_2058	PWY-6834	spermidine biosynthesis III
Swoo_2059	PWY-40	putrescine biosynthesis I
Swoo_2059	PWY-6305	putrescine biosynthesis IV
Swoo_2060	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Swoo_2060	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Swoo_2078	PWY-6123	inosine-5'-phosphate biosynthesis I
Swoo_2078	PWY-6124	inosine-5'-phosphate biosynthesis II
Swoo_2078	PWY-7234	inosine-5'-phosphate biosynthesis III
Swoo_2084	PWY-6317	galactose degradation I (Leloir pathway)
Swoo_2084	PWY-6527	stachyose degradation
Swoo_2085	PWY-3821	galactose degradation III
Swoo_2085	PWY-6317	galactose degradation I (Leloir pathway)
Swoo_2085	PWY-6527	stachyose degradation
Swoo_2101	PWY-381	nitrate reduction II (assimilatory)
Swoo_2101	PWY-5675	nitrate reduction V (assimilatory)
Swoo_2101	PWY-6549	L-glutamine biosynthesis III
Swoo_2101	PWY-6963	ammonia assimilation cycle I
Swoo_2101	PWY-6964	ammonia assimilation cycle II
Swoo_2120	PWY-6936	seleno-amino acid biosynthesis
Swoo_2121	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Swoo_2140	PWY-5022	4-aminobutanoate degradation V
Swoo_2140	PWY-6728	methylaspartate cycle
Swoo_2140	PWY-7126	ethylene biosynthesis IV
Swoo_2141	PWY-5686	UMP biosynthesis
Swoo_2148	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Swoo_2148	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Swoo_2148	PWY-5989	stearate biosynthesis II (bacteria and plants)
Swoo_2148	PWY-5994	palmitate biosynthesis I (animals and fungi)
Swoo_2148	PWY-6113	superpathway of mycolate biosynthesis
Swoo_2148	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Swoo_2148	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Swoo_2148	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Swoo_2148	PWYG-321	mycolate biosynthesis
Swoo_2152	PWY-5269	cardiolipin biosynthesis II
Swoo_2152	PWY-5668	cardiolipin biosynthesis I
Swoo_2159	PWY-6854	ethylene biosynthesis III (microbes)
Swoo_2168	PWY-4202	arsenate detoxification I (glutaredoxin)
Swoo_2168	PWY-4621	arsenate detoxification II (glutaredoxin)
Swoo_2177	PWY-2941	L-lysine biosynthesis II
Swoo_2177	PWY-2942	L-lysine biosynthesis III
Swoo_2177	PWY-5097	L-lysine biosynthesis VI
Swoo_2182	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Swoo_2182	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Swoo_2185	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Swoo_2185	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Swoo_2185	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Swoo_2185	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Swoo_2201	PWY-5767	Swoo_2201
Swoo_2226	PWY-5958	acridone alkaloid biosynthesis
Swoo_2226	PWY-6543	4-aminobenzoate biosynthesis
Swoo_2226	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Swoo_2226	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Swoo_2226	PWY-6722	candicidin biosynthesis
Swoo_2227	PWY-5392	reductive TCA cycle II
Swoo_2227	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Swoo_2227	PWY-5690	TCA cycle II (plants and fungi)
Swoo_2227	PWY-5913	TCA cycle VI (obligate autotrophs)
Swoo_2227	PWY-6728	methylaspartate cycle
Swoo_2227	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swoo_2227	PWY-7254	TCA cycle VII (acetate-producers)
Swoo_2227	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Swoo_2234	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swoo_2236	PWY-6728	methylaspartate cycle
Swoo_2236	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swoo_2236	PWY-7118	chitin degradation to ethanol
Swoo_2236	PWY-7294	xylose degradation IV
Swoo_2236	PWY-7295	L-arabinose degradation IV
Swoo_2241	PWY-3162	L-tryptophan degradation V (side chain pathway)
Swoo_2241	PWY-5057	L-valine degradation II
Swoo_2241	PWY-5076	L-leucine degradation III
Swoo_2241	PWY-5078	L-isoleucine degradation II
Swoo_2241	PWY-5079	L-phenylalanine degradation III
Swoo_2241	PWY-5082	L-methionine degradation III
Swoo_2241	PWY-5162	2-oxopentenoate degradation
Swoo_2241	PWY-5436	L-threonine degradation IV
Swoo_2241	PWY-5480	pyruvate fermentation to ethanol I
Swoo_2241	PWY-5486	pyruvate fermentation to ethanol II
Swoo_2241	PWY-5751	phenylethanol biosynthesis
Swoo_2241	PWY-6028	acetoin degradation
Swoo_2241	PWY-6313	serotonin degradation
Swoo_2241	PWY-6333	acetaldehyde biosynthesis I
Swoo_2241	PWY-6342	noradrenaline and adrenaline degradation
Swoo_2241	PWY-6587	pyruvate fermentation to ethanol III
Swoo_2241	PWY-6802	salidroside biosynthesis
Swoo_2241	PWY-6871	3-methylbutanol biosynthesis
Swoo_2241	PWY-7013	L-1,2-propanediol degradation
Swoo_2241	PWY-7085	triethylamine degradation
Swoo_2241	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Swoo_2241	PWY-7118	chitin degradation to ethanol
Swoo_2241	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Swoo_2241	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Swoo_2241	PWY-7557	dehydrodiconiferyl alcohol degradation
Swoo_2251	PWY-6420	pyrroloquinoline quinone biosynthesis
Swoo_2275	PWY-2723	trehalose degradation V
Swoo_2275	PWY-3801	sucrose degradation II (sucrose synthase)
Swoo_2275	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Swoo_2275	PWY-5661	GDP-glucose biosynthesis
Swoo_2275	PWY-5661-1	Swoo_2275
Swoo_2275	PWY-5940	streptomycin biosynthesis
Swoo_2275	PWY-5941	glycogen degradation II (eukaryotic)
Swoo_2275	PWY-622	starch biosynthesis
Swoo_2275	PWY-6731	starch degradation III
Swoo_2275	PWY-6737	starch degradation V
Swoo_2275	PWY-6749	CMP-legionaminate biosynthesis I
Swoo_2275	PWY-7238	sucrose biosynthesis II
Swoo_2275	PWY-7343	UDP-glucose biosynthesis
Swoo_2280	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Swoo_2281	PWY-5316	nicotine biosynthesis
Swoo_2281	PWY-7342	superpathway of nicotine biosynthesis
Swoo_2302	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Swoo_2302	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Swoo_2302	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Swoo_2302	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Swoo_2302	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swoo_2302	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swoo_2302	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Swoo_2302	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Swoo_2303	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Swoo_2303	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Swoo_2303	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Swoo_2303	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Swoo_2303	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swoo_2303	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swoo_2303	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Swoo_2303	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Swoo_2305	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
Swoo_2305	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
Swoo_2305	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
Swoo_2305	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Swoo_2305	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
Swoo_2305	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
Swoo_2305	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
Swoo_2305	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
Swoo_2305	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Swoo_2305	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
Swoo_2308	PWY-5913	TCA cycle VI (obligate autotrophs)
Swoo_2308	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Swoo_2308	PWY-6638	sulfolactate degradation III
Swoo_2308	PWY-6642	(<i>R</i>)-cysteate degradation
Swoo_2308	PWY-6643	coenzyme M biosynthesis II
Swoo_2308	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Swoo_2308	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Swoo_2308	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Swoo_2309	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Swoo_2310	PWY-7205	CMP phosphorylation
Swoo_2315	PWY-5686	UMP biosynthesis
Swoo_2324	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Swoo_2324	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Swoo_2327	PWY-5269	cardiolipin biosynthesis II
Swoo_2327	PWY-5668	cardiolipin biosynthesis I
Swoo_2393	PWY-1042	glycolysis IV (plant cytosol)
Swoo_2393	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swoo_2393	PWY-6901	superpathway of glucose and xylose degradation
Swoo_2393	PWY-7003	glycerol degradation to butanol
Swoo_2395	PWY-1042	glycolysis IV (plant cytosol)
Swoo_2395	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swoo_2395	PWY-6901	superpathway of glucose and xylose degradation
Swoo_2395	PWY-7003	glycerol degradation to butanol
Swoo_2411	PWY-5913	TCA cycle VI (obligate autotrophs)
Swoo_2411	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Swoo_2411	PWY-6638	sulfolactate degradation III
Swoo_2411	PWY-6642	(<i>R</i>)-cysteate degradation
Swoo_2411	PWY-6643	coenzyme M biosynthesis II
Swoo_2411	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Swoo_2411	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Swoo_2411	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Swoo_2424	PWY-3781	aerobic respiration I (cytochrome c)
Swoo_2424	PWY-4521	arsenite oxidation I (respiratory)
Swoo_2424	PWY-6692	Fe(II) oxidation
Swoo_2424	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Swoo_2425	PWY-3781	aerobic respiration I (cytochrome c)
Swoo_2425	PWY-4521	arsenite oxidation I (respiratory)
Swoo_2425	PWY-6692	Fe(II) oxidation
Swoo_2425	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Swoo_2450	PWY-4061	glutathione-mediated detoxification I
Swoo_2450	PWY-6842	glutathione-mediated detoxification II
Swoo_2450	PWY-7112	4-hydroxy-2-nonenal detoxification
Swoo_2450	PWY-7533	gliotoxin biosynthesis
Swoo_2451	PWY-4061	glutathione-mediated detoxification I
Swoo_2451	PWY-6842	glutathione-mediated detoxification II
Swoo_2451	PWY-7112	4-hydroxy-2-nonenal detoxification
Swoo_2451	PWY-7533	gliotoxin biosynthesis
Swoo_2479	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Swoo_2495	PWY-6167	flavin biosynthesis II (archaea)
Swoo_2495	PWY-6168	flavin biosynthesis III (fungi)
Swoo_2495	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Swoo_2499	PWY-5747	2-methylcitrate cycle II
Swoo_2530	PWY-5392	reductive TCA cycle II
Swoo_2530	PWY-5537	pyruvate fermentation to acetate V
Swoo_2530	PWY-5538	pyruvate fermentation to acetate VI
Swoo_2530	PWY-5690	TCA cycle II (plants and fungi)
Swoo_2530	PWY-5913	TCA cycle VI (obligate autotrophs)
Swoo_2530	PWY-6728	methylaspartate cycle
Swoo_2530	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swoo_2530	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Swoo_2536	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Swoo_2536	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Swoo_2536	PWY-7242	D-fructuronate degradation
Swoo_2536	PWY-7310	D-glucosaminate degradation
Swoo_2537	PWY-5101	L-isoleucine biosynthesis II
Swoo_2537	PWY-5103	L-isoleucine biosynthesis III
Swoo_2537	PWY-5104	L-isoleucine biosynthesis IV
Swoo_2537	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Swoo_2538	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Swoo_2538	PWY-6855	chitin degradation I (archaea)
Swoo_2538	PWY-6906	chitin derivatives degradation
Swoo_2539	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Swoo_2541	PWY-1042	glycolysis IV (plant cytosol)
Swoo_2541	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Swoo_2541	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swoo_2541	PWY-5723	Rubisco shunt
Swoo_2541	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Swoo_2541	PWY-6886	1-butanol autotrophic biosynthesis
Swoo_2541	PWY-6901	superpathway of glucose and xylose degradation
Swoo_2541	PWY-7003	glycerol degradation to butanol
Swoo_2541	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Swoo_2541	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Swoo_2551	PWY-6703	preQ<sub>0</sub> biosynthesis
Swoo_2552	PWY-6703	preQ<sub>0</sub> biosynthesis
Swoo_2563	PWY-5386	methylglyoxal degradation I
Swoo_2587	PWY-6892	thiazole biosynthesis I (E. coli)
Swoo_2587	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Swoo_2588	PWY-6891	thiazole biosynthesis II (Bacillus)
Swoo_2588	PWY-6892	thiazole biosynthesis I (E. coli)
Swoo_2591	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Swoo_2591	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Swoo_2591	PWY-6897	thiamin salvage II
Swoo_2591	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Swoo_2591	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Swoo_2591	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Swoo_2591	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Swoo_2592	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Swoo_2611	PWY-5386	methylglyoxal degradation I
Swoo_2674	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swoo_2674	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swoo_2693	PWY-5663	tetrahydrobiopterin biosynthesis I
Swoo_2693	PWY-5664	tetrahydrobiopterin biosynthesis II
Swoo_2693	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Swoo_2693	PWY-6703	preQ<sub>0</sub> biosynthesis
Swoo_2693	PWY-6983	tetrahydrobiopterin biosynthesis III
Swoo_2693	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Swoo_2702	PWY-5913	TCA cycle VI (obligate autotrophs)
Swoo_2702	PWY-6549	L-glutamine biosynthesis III
Swoo_2702	PWY-6728	methylaspartate cycle
Swoo_2702	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swoo_2702	PWY-7124	ethylene biosynthesis V (engineered)
Swoo_2702	PWY-7254	TCA cycle VII (acetate-producers)
Swoo_2702	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Swoo_2707	PWY-6123	inosine-5'-phosphate biosynthesis I
Swoo_2707	PWY-6124	inosine-5'-phosphate biosynthesis II
Swoo_2707	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Swoo_2707	PWY-7234	inosine-5'-phosphate biosynthesis III
Swoo_2714	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swoo_2714	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swoo_2715	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swoo_2717	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Swoo_2717	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Swoo_2717	PWY-6164	3-dehydroquinate biosynthesis I
Swoo_2719	PWY-6902	chitin degradation II
Swoo_2725	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Swoo_2725	PWY-7118	chitin degradation to ethanol
Swoo_2743	PWY-7183	pyrimidine nucleobases salvage I
Swoo_2744	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Swoo_2744	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Swoo_2744	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Swoo_2745	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Swoo_2745	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Swoo_2822	PWY-2941	L-lysine biosynthesis II
Swoo_2822	PWY-2942	L-lysine biosynthesis III
Swoo_2822	PWY-5097	L-lysine biosynthesis VI
Swoo_2826	PWY-4381	fatty acid biosynthesis initiation I
Swoo_2854	PWY-5674	nitrate reduction IV (dissimilatory)
Swoo_2857	PWY-6936	seleno-amino acid biosynthesis
Swoo_2883	PWY-5480	pyruvate fermentation to ethanol I
Swoo_2883	PWY-5485	pyruvate fermentation to acetate IV
Swoo_2883	PWY-5493	reductive monocarboxylic acid cycle
Swoo_2886	PWY-5482	pyruvate fermentation to acetate II
Swoo_2886	PWY-5485	pyruvate fermentation to acetate IV
Swoo_2886	PWY-5497	purine nucleobases degradation II (anaerobic)
Swoo_2887	PWY-1281	sulfoacetaldehyde degradation I
Swoo_2887	PWY-5482	pyruvate fermentation to acetate II
Swoo_2887	PWY-5485	pyruvate fermentation to acetate IV
Swoo_2887	PWY-5497	purine nucleobases degradation II (anaerobic)
Swoo_2887	PWY-6637	sulfolactate degradation II
Swoo_2892	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Swoo_2892	PWY-6148	tetrahydromethanopterin biosynthesis
Swoo_2892	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Swoo_2892	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Swoo_2912	PWY-5958	acridone alkaloid biosynthesis
Swoo_2912	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Swoo_2912	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Swoo_2913	PWY-5958	acridone alkaloid biosynthesis
Swoo_2913	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Swoo_2913	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Swoo_2929	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
Swoo_2980	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Swoo_2980	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Swoo_2980	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Swoo_2980	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Swoo_2983	PWY-2161	folate polyglutamylation
Swoo_2986	PWY-2941	L-lysine biosynthesis II
Swoo_2986	PWY-2942	L-lysine biosynthesis III
Swoo_2986	PWY-5097	L-lysine biosynthesis VI
Swoo_2986	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Swoo_2986	PWY-6559	spermidine biosynthesis II
Swoo_2986	PWY-6562	norspermidine biosynthesis
Swoo_2986	PWY-7153	grixazone biosynthesis
Swoo_2986	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Swoo_2996	PWY-5988	wound-induced proteolysis I
Swoo_2996	PWY-6018	seed germination protein turnover
Swoo_2998	PWY-6157	autoinducer AI-1 biosynthesis
Swoo_3000	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
Swoo_3015	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Swoo_3015	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Swoo_3015	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Swoo_3017	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Swoo_3026	PWY-1361	benzoyl-CoA degradation I (aerobic)
Swoo_3026	PWY-5109	2-methylbutanoate biosynthesis
Swoo_3026	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Swoo_3026	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Swoo_3026	PWY-5177	glutaryl-CoA degradation
Swoo_3026	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swoo_3026	PWY-6435	4-hydroxybenzoate biosynthesis V
Swoo_3026	PWY-6583	pyruvate fermentation to butanol I
Swoo_3026	PWY-6863	pyruvate fermentation to hexanol
Swoo_3026	PWY-6883	pyruvate fermentation to butanol II
Swoo_3026	PWY-6944	androstenedione degradation
Swoo_3026	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Swoo_3026	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Swoo_3026	PWY-7007	methyl ketone biosynthesis
Swoo_3026	PWY-7046	4-coumarate degradation (anaerobic)
Swoo_3026	PWY-7094	fatty acid salvage
Swoo_3026	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Swoo_3026	PWY-735	jasmonic acid biosynthesis
Swoo_3026	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Swoo_3027	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Swoo_3027	PWY-6435	4-hydroxybenzoate biosynthesis V
Swoo_3027	PWY-6863	pyruvate fermentation to hexanol
Swoo_3027	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Swoo_3027	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Swoo_3027	PWY-6948	sitosterol degradation to androstenedione
Swoo_3027	PWY-7094	fatty acid salvage
Swoo_3027	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
Swoo_3027	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
Swoo_3027	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
Swoo_3027	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
Swoo_3027	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
Swoo_3027	PWY-735	jasmonic acid biosynthesis
Swoo_3043	PWY-6728	methylaspartate cycle
Swoo_3043	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swoo_3043	PWY-7118	chitin degradation to ethanol
Swoo_3043	PWY-7294	xylose degradation IV
Swoo_3043	PWY-7295	L-arabinose degradation IV
Swoo_3046	PWY-6168	flavin biosynthesis III (fungi)
Swoo_3046	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Swoo_3049	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swoo_3049	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swoo_3049	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swoo_3115	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Swoo_3115	PWY-2201	folate transformations I
Swoo_3115	PWY-3841	folate transformations II
Swoo_3115	PWY-5030	L-histidine degradation III
Swoo_3115	PWY-5497	purine nucleobases degradation II (anaerobic)
Swoo_3115	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Swoo_3121	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Swoo_3125	PWY-5674	nitrate reduction IV (dissimilatory)
Swoo_3126	PWY-5674	nitrate reduction IV (dissimilatory)
Swoo_3147	PWY-3461	L-tyrosine biosynthesis II
Swoo_3147	PWY-3462	L-phenylalanine biosynthesis II
Swoo_3147	PWY-6120	L-tyrosine biosynthesis III
Swoo_3147	PWY-6627	salinosporamide A biosynthesis
Swoo_3151	PWY-6749	CMP-legionaminate biosynthesis I
Swoo_3159	PWY-4381	fatty acid biosynthesis initiation I
Swoo_3181	PWY-4381	fatty acid biosynthesis initiation I
Swoo_3188	PWY-5988	wound-induced proteolysis I
Swoo_3188	PWY-6018	seed germination protein turnover
Swoo_3201	PWY-5642	2,4-dinitrotoluene degradation
Swoo_3201	PWY-6373	acrylate degradation
Swoo_3212	PWY-5839	menaquinol-7 biosynthesis
Swoo_3212	PWY-5851	demethylmenaquinol-9 biosynthesis
Swoo_3212	PWY-5852	demethylmenaquinol-8 biosynthesis I
Swoo_3212	PWY-5853	demethylmenaquinol-6 biosynthesis I
Swoo_3212	PWY-5890	menaquinol-10 biosynthesis
Swoo_3212	PWY-5891	menaquinol-11 biosynthesis
Swoo_3212	PWY-5892	menaquinol-12 biosynthesis
Swoo_3212	PWY-5895	menaquinol-13 biosynthesis
Swoo_3214	PWY-5386	methylglyoxal degradation I
Swoo_3224	PWY-4381	fatty acid biosynthesis initiation I
Swoo_3224	PWY-5743	3-hydroxypropanoate cycle
Swoo_3224	PWY-5744	glyoxylate assimilation
Swoo_3224	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swoo_3224	PWY-6679	jadomycin biosynthesis
Swoo_3224	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Swoo_3227	PWY-5074	mevalonate degradation
Swoo_3233	PWY-7199	pyrimidine deoxyribonucleosides salvage
Swoo_3270	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Swoo_3270	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Swoo_3270	PWY-5989	stearate biosynthesis II (bacteria and plants)
Swoo_3270	PWY-5994	palmitate biosynthesis I (animals and fungi)
Swoo_3270	PWY-6113	superpathway of mycolate biosynthesis
Swoo_3270	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Swoo_3270	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Swoo_3270	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Swoo_3270	PWYG-321	mycolate biosynthesis
Swoo_3275	PWY-7560	methylerythritol phosphate pathway II
Swoo_3286	PWY-2201	folate transformations I
Swoo_3286	PWY-5497	purine nucleobases degradation II (anaerobic)
Swoo_3287	PWY-7310	D-glucosaminate degradation
Swoo_3300	PWY-6700	queuosine biosynthesis
Swoo_3304	PWY-6012	acyl carrier protein metabolism I
Swoo_3304	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Swoo_3321	PWY-6123	inosine-5'-phosphate biosynthesis I
Swoo_3321	PWY-7234	inosine-5'-phosphate biosynthesis III
Swoo_3326	PWY-6840	homoglutathione biosynthesis
Swoo_3326	PWY-7255	ergothioneine biosynthesis I (bacteria)
Swoo_3335	PWY-6339	syringate degradation
Swoo_3337	PWY-6339	syringate degradation
Swoo_3345	PWY-5381	pyridine nucleotide cycling (plants)
Swoo_3345	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Swoo_3345	PWY-6596	adenosine nucleotides degradation I
Swoo_3345	PWY-6606	guanosine nucleotides degradation II
Swoo_3345	PWY-6607	guanosine nucleotides degradation I
Swoo_3345	PWY-6608	guanosine nucleotides degradation III
Swoo_3345	PWY-7185	UTP and CTP dephosphorylation I
Swoo_3347	PWY-7560	methylerythritol phosphate pathway II
Swoo_3348	PWY-7560	methylerythritol phosphate pathway II
Swoo_3350	PWY-1042	glycolysis IV (plant cytosol)
Swoo_3350	PWY-1622	formaldehyde assimilation I (serine pathway)
Swoo_3350	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Swoo_3350	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swoo_3350	PWY-5723	Rubisco shunt
Swoo_3350	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Swoo_3350	PWY-6886	1-butanol autotrophic biosynthesis
Swoo_3350	PWY-6901	superpathway of glucose and xylose degradation
Swoo_3350	PWY-7003	glycerol degradation to butanol
Swoo_3350	PWY-7124	ethylene biosynthesis V (engineered)
Swoo_3350	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Swoo_3351	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Swoo_3351	PWY-7177	UTP and CTP dephosphorylation II
Swoo_3351	PWY-7185	UTP and CTP dephosphorylation I
Swoo_3368	PWY-5386	methylglyoxal degradation I
Swoo_3394	PWY-5506	methanol oxidation to formaldehyde IV
Swoo_3416	PWY-842	starch degradation I
Swoo_3422	PWY-4202	arsenate detoxification I (glutaredoxin)
Swoo_3422	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Swoo_3422	PWY-6608	guanosine nucleotides degradation III
Swoo_3422	PWY-6609	adenine and adenosine salvage III
Swoo_3422	PWY-6611	adenine and adenosine salvage V
Swoo_3422	PWY-6620	guanine and guanosine salvage
Swoo_3422	PWY-6627	salinosporamide A biosynthesis
Swoo_3422	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Swoo_3422	PWY-7179	purine deoxyribonucleosides degradation I
Swoo_3422	PWY-7179-1	purine deoxyribonucleosides degradation
Swoo_3427	PWY-5344	L-homocysteine biosynthesis
Swoo_3427	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Swoo_3444	PWY-5451	acetone degradation I (to methylglyoxal)
Swoo_3444	PWY-6588	pyruvate fermentation to acetone
Swoo_3444	PWY-6876	isopropanol biosynthesis
Swoo_3444	PWY-7466	acetone degradation III (to propane-1,2-diol)
Swoo_3464	PWY-6825	phosphatidylcholine biosynthesis V
Swoo_3478	PWY-6891	thiazole biosynthesis II (Bacillus)
Swoo_3478	PWY-6892	thiazole biosynthesis I (E. coli)
Swoo_3478	PWY-7560	methylerythritol phosphate pathway II
Swoo_3480	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Swoo_3480	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Swoo_3480	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Swoo_3546	PWY-4202	arsenate detoxification I (glutaredoxin)
Swoo_3546	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Swoo_3546	PWY-6608	guanosine nucleotides degradation III
Swoo_3546	PWY-6609	adenine and adenosine salvage III
Swoo_3546	PWY-6611	adenine and adenosine salvage V
Swoo_3546	PWY-6620	guanine and guanosine salvage
Swoo_3546	PWY-6627	salinosporamide A biosynthesis
Swoo_3546	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Swoo_3546	PWY-7179	purine deoxyribonucleosides degradation I
Swoo_3546	PWY-7179-1	purine deoxyribonucleosides degradation
Swoo_3547	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Swoo_3548	PWY-7181	pyrimidine deoxyribonucleosides degradation
Swoo_3549	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Swoo_3565	PWY-1042	glycolysis IV (plant cytosol)
Swoo_3565	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swoo_3565	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Swoo_3565	PWY-7003	glycerol degradation to butanol
Swoo_3566	PWY-6749	CMP-legionaminate biosynthesis I
Swoo_3567	PWY-6614	tetrahydrofolate biosynthesis
Swoo_3577	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Swoo_3577	PWY-5686	UMP biosynthesis
Swoo_3577	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Swoo_3578	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Swoo_3578	PWY-5686	UMP biosynthesis
Swoo_3578	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Swoo_3579	PWY-2941	L-lysine biosynthesis II
Swoo_3579	PWY-2942	L-lysine biosynthesis III
Swoo_3579	PWY-5097	L-lysine biosynthesis VI
Swoo_3596	PWY-723	alkylnitronates degradation
Swoo_3602	PWY-5988	wound-induced proteolysis I
Swoo_3602	PWY-6018	seed germination protein turnover
Swoo_3618	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Swoo_3618	PWY-6153	autoinducer AI-2 biosynthesis I
Swoo_3618	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
Swoo_3633	PWY-282	cuticular wax biosynthesis
Swoo_3648	PWY-6654	phosphopantothenate biosynthesis III
Swoo_3652	PWY-5674	nitrate reduction IV (dissimilatory)
Swoo_3662	PWY-3821	galactose degradation III
Swoo_3662	PWY-6317	galactose degradation I (Leloir pathway)
Swoo_3662	PWY-6527	stachyose degradation
Swoo_3663	PWY-3821	galactose degradation III
Swoo_3663	PWY-6317	galactose degradation I (Leloir pathway)
Swoo_3663	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Swoo_3663	PWY-6527	stachyose degradation
Swoo_3663	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Swoo_3663	PWY-7344	UDP-D-galactose biosynthesis
Swoo_3665	PWY-7130	L-glucose degradation
Swoo_3674	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Swoo_3674	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Swoo_3686	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Swoo_3688	PWY-7560	methylerythritol phosphate pathway II
Swoo_3705	PWY-5381	pyridine nucleotide cycling (plants)
Swoo_3705	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Swoo_3712	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Swoo_3712	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Swoo_3714	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Swoo_3714	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Swoo_3715	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Swoo_3715	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Swoo_3715	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Swoo_3718	PWY-5669	phosphatidylethanolamine biosynthesis I
Swoo_3731	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Swoo_3731	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Swoo_3731	PWY-6936	seleno-amino acid biosynthesis
Swoo_3731	PWY-702	L-methionine biosynthesis II
Swoo_3745	PWY-4261	glycerol degradation I
Swoo_3761	PWY-5686	UMP biosynthesis
Swoo_3764	PWY-2941	L-lysine biosynthesis II
Swoo_3764	PWY-2942	L-lysine biosynthesis III
Swoo_3764	PWY-5097	L-lysine biosynthesis VI
Swoo_3764	PWY-6559	spermidine biosynthesis II
Swoo_3764	PWY-6562	norspermidine biosynthesis
Swoo_3764	PWY-7153	grixazone biosynthesis
Swoo_3770	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swoo_3792	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Swoo_3792	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Swoo_3792	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Swoo_3792	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Swoo_3796	PWY-5988	wound-induced proteolysis I
Swoo_3796	PWY-6018	seed germination protein turnover
Swoo_3801	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Swoo_3801	PWY-6148	tetrahydromethanopterin biosynthesis
Swoo_3801	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Swoo_3801	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Swoo_3802	PWY-6654	phosphopantothenate biosynthesis III
Swoo_3818	PWY-6599	guanine and guanosine salvage II
Swoo_3818	PWY-6609	adenine and adenosine salvage III
Swoo_3818	PWY-6610	adenine and adenosine salvage IV
Swoo_3818	PWY-6620	guanine and guanosine salvage
Swoo_3854	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swoo_3854	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swoo_3881	PWY-5506	methanol oxidation to formaldehyde IV
Swoo_3884	PWY-4202	arsenate detoxification I (glutaredoxin)
Swoo_3884	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Swoo_3884	PWY-6608	guanosine nucleotides degradation III
Swoo_3884	PWY-6609	adenine and adenosine salvage III
Swoo_3884	PWY-6611	adenine and adenosine salvage V
Swoo_3884	PWY-6620	guanine and guanosine salvage
Swoo_3884	PWY-6627	salinosporamide A biosynthesis
Swoo_3884	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Swoo_3884	PWY-7179	purine deoxyribonucleosides degradation I
Swoo_3884	PWY-7179-1	purine deoxyribonucleosides degradation
Swoo_3892	PWY-5532	adenosine nucleotides degradation IV
Swoo_3926	PWY-1881	formate oxidation to CO<sub>2</sub>
Swoo_3926	PWY-5497	purine nucleobases degradation II (anaerobic)
Swoo_3926	PWY-6696	oxalate degradation III
Swoo_3941	PWY-6902	chitin degradation II
Swoo_3945	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Swoo_4002	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Swoo_4002	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Swoo_4026	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swoo_4026	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swoo_4036	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Swoo_4036	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Swoo_4038	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Swoo_4044	PWY-4381	fatty acid biosynthesis initiation I
Swoo_4052	PWY-4041	&gamma;-glutamyl cycle
Swoo_4080	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Swoo_4080	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Swoo_4080	PWY-6268	adenosylcobalamin salvage from cobalamin
Swoo_4080	PWY-6269	adenosylcobalamin salvage from cobinamide II
Swoo_4082	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Swoo_4082	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Swoo_4082	PWY-6269	adenosylcobalamin salvage from cobinamide II
Swoo_4083	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Swoo_4083	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Swoo_4083	PWY-6269	adenosylcobalamin salvage from cobinamide II
Swoo_4084	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Swoo_4084	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Swoo_4084	PWY-6269	adenosylcobalamin salvage from cobinamide II
Swoo_4088	PWY-2201	folate transformations I
Swoo_4088	PWY-3841	folate transformations II
Swoo_4123	PWY-4381	fatty acid biosynthesis initiation I
Swoo_4123	PWY-5743	3-hydroxypropanoate cycle
Swoo_4123	PWY-5744	glyoxylate assimilation
Swoo_4123	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swoo_4123	PWY-6679	jadomycin biosynthesis
Swoo_4123	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Swoo_4136	PWY-5491	diethylphosphate degradation
Swoo_4160	PWY-5958	acridone alkaloid biosynthesis
Swoo_4160	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Swoo_4160	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Swoo_4166	PWY-3781	aerobic respiration I (cytochrome c)
Swoo_4166	PWY-6692	Fe(II) oxidation
Swoo_4166	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
Swoo_4166	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Swoo_4171	PWY-2781	<i>cis</i>-zeatin biosynthesis
Swoo_4175	PWY-6938	NADH repair
Swoo_4180	PWY-5669	phosphatidylethanolamine biosynthesis I
Swoo_4206	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Swoo_4219	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Swoo_4227	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swoo_4227	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swoo_4236	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Swoo_4236	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Swoo_4264	PWY-5392	reductive TCA cycle II
Swoo_4264	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Swoo_4264	PWY-5690	TCA cycle II (plants and fungi)
Swoo_4264	PWY-5913	TCA cycle VI (obligate autotrophs)
Swoo_4264	PWY-6728	methylaspartate cycle
Swoo_4264	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swoo_4264	PWY-7254	TCA cycle VII (acetate-producers)
Swoo_4264	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Swoo_4277	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Swoo_4331	PWY-5667	CDP-diacylglycerol biosynthesis I
Swoo_4331	PWY-5981	CDP-diacylglycerol biosynthesis III
Swoo_4331	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
Swoo_4331	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
Swoo_4339	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Swoo_4339	PWY-2161	folate polyglutamylation
Swoo_4339	PWY-2201	folate transformations I
Swoo_4339	PWY-3841	folate transformations II
Swoo_4357	PWY-4261	glycerol degradation I
Swoo_4358	PWY-4261	glycerol degradation I
Swoo_4358	PWY-6118	glycerol-3-phosphate shuttle
Swoo_4358	PWY-6952	glycerophosphodiester degradation
Swoo_4359	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swoo_4359	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swoo_4385	PWY-1042	glycolysis IV (plant cytosol)
Swoo_4385	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swoo_4385	PWY-6901	superpathway of glucose and xylose degradation
Swoo_4385	PWY-7003	glycerol degradation to butanol
Swoo_4456	PWY-5674	nitrate reduction IV (dissimilatory)
Swoo_4458	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Swoo_4458	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Swoo_4458	PWY-6936	seleno-amino acid biosynthesis
Swoo_4458	PWY-702	L-methionine biosynthesis II
Swoo_4477	PWY-5674	nitrate reduction IV (dissimilatory)
Swoo_4509	PWY-4202	arsenate detoxification I (glutaredoxin)
Swoo_4509	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Swoo_4509	PWY-6608	guanosine nucleotides degradation III
Swoo_4509	PWY-6609	adenine and adenosine salvage III
Swoo_4509	PWY-6611	adenine and adenosine salvage V
Swoo_4509	PWY-6620	guanine and guanosine salvage
Swoo_4509	PWY-6627	salinosporamide A biosynthesis
Swoo_4509	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Swoo_4509	PWY-7179	purine deoxyribonucleosides degradation I
Swoo_4509	PWY-7179-1	purine deoxyribonucleosides degradation
Swoo_4517	PWY-5674	nitrate reduction IV (dissimilatory)
Swoo_4532	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swoo_4532	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swoo_4533	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Swoo_4533	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Swoo_4533	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Swoo_4533	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Swoo_4535	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swoo_4535	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swoo_4536	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Swoo_4536	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Swoo_4536	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Swoo_4537	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swoo_4537	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swoo_4544	PWY-4261	glycerol degradation I
Swoo_4549	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Swoo_4550	PWY-6871	3-methylbutanol biosynthesis
Swoo_4558	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Swoo_4563	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Swoo_4563	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Swoo_4563	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swoo_4563	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Swoo_4566	PWY-5663	tetrahydrobiopterin biosynthesis I
Swoo_4566	PWY-5664	tetrahydrobiopterin biosynthesis II
Swoo_4566	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Swoo_4566	PWY-6703	preQ<sub>0</sub> biosynthesis
Swoo_4566	PWY-6983	tetrahydrobiopterin biosynthesis III
Swoo_4566	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Swoo_4567	PWY-5686	UMP biosynthesis
Swoo_4581	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Swoo_4600	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Swoo_4600	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Swoo_4600	PWY-5989	stearate biosynthesis II (bacteria and plants)
Swoo_4600	PWY-5994	palmitate biosynthesis I (animals and fungi)
Swoo_4600	PWY-6113	superpathway of mycolate biosynthesis
Swoo_4600	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Swoo_4600	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Swoo_4600	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Swoo_4600	PWYG-321	mycolate biosynthesis
Swoo_4610	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Swoo_4610	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Swoo_4610	PWY-5989	stearate biosynthesis II (bacteria and plants)
Swoo_4610	PWY-5994	palmitate biosynthesis I (animals and fungi)
Swoo_4610	PWY-6113	superpathway of mycolate biosynthesis
Swoo_4610	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Swoo_4610	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Swoo_4610	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Swoo_4610	PWYG-321	mycolate biosynthesis
Swoo_4611	PWY-5367	petroselinate biosynthesis
Swoo_4611	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Swoo_4611	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Swoo_4611	PWY-5989	stearate biosynthesis II (bacteria and plants)
Swoo_4611	PWY-5994	palmitate biosynthesis I (animals and fungi)
Swoo_4611	PWY-6113	superpathway of mycolate biosynthesis
Swoo_4611	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Swoo_4611	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Swoo_4611	PWY-6951	Swoo_4611
Swoo_4611	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Swoo_4611	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Swoo_4611	PWYG-321	mycolate biosynthesis
Swoo_4637	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Swoo_4637	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Swoo_4643	PWY-381	nitrate reduction II (assimilatory)
Swoo_4643	PWY-5675	nitrate reduction V (assimilatory)
Swoo_4643	PWY-6549	L-glutamine biosynthesis III
Swoo_4643	PWY-6963	ammonia assimilation cycle I
Swoo_4643	PWY-6964	ammonia assimilation cycle II
Swoo_4705	PWY-3961	phosphopantothenate biosynthesis II
Swoo_4706	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Swoo_4706	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Swoo_4707	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swoo_4707	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swoo_4709	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swoo_4709	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swoo_4713	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Swoo_4739	PWY-4321	L-glutamate degradation IV
Swoo_4740	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Swoo_4740	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Swoo_4753	PWY-6807	xyloglucan degradation II (exoglucanase)
Swoo_4764	PWY-6167	flavin biosynthesis II (archaea)
Swoo_4764	PWY-6168	flavin biosynthesis III (fungi)
Swoo_4769	PWY-6823	molybdenum cofactor biosynthesis
Swoo_4770	PWY-6823	molybdenum cofactor biosynthesis
Swoo_4789	PWY-6823	molybdenum cofactor biosynthesis
Swoo_4793	PWY-6823	molybdenum cofactor biosynthesis
Swoo_4826	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
Swoo_4826	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Swoo_4826	PWY-6148	tetrahydromethanopterin biosynthesis
Swoo_4837	PWY-5028	L-histidine degradation II
Swoo_4837	PWY-5030	L-histidine degradation III
Swoo_4838	PWY-5028	L-histidine degradation II
Swoo_4838	PWY-5030	L-histidine degradation III
Swoo_4840	PWY-5028	L-histidine degradation II
Swoo_4840	PWY-5030	L-histidine degradation III
Swoo_4874	PWY-5667	CDP-diacylglycerol biosynthesis I
Swoo_4874	PWY-5981	CDP-diacylglycerol biosynthesis III
Swoo_4877	PWY-1042	glycolysis IV (plant cytosol)
Swoo_4877	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Swoo_4877	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swoo_4877	PWY-5723	Rubisco shunt
Swoo_4877	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Swoo_4877	PWY-6886	1-butanol autotrophic biosynthesis
Swoo_4877	PWY-6901	superpathway of glucose and xylose degradation
Swoo_4877	PWY-7003	glycerol degradation to butanol
Swoo_4877	PWY-7124	ethylene biosynthesis V (engineered)
Swoo_4877	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Swoo_4886	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Swoo_4886	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Swoo_4892	PWY-6749	CMP-legionaminate biosynthesis I
Swoo_4895	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Swoo_4898	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Swoo_4900	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Swoo_4911	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
Swoo_4911	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
Swoo_4911	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
Swoo_4911	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Swoo_4911	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
Swoo_4911	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
Swoo_4911	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
Swoo_4911	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
Swoo_4911	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Swoo_4911	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
Swoo_4923	PWY-5506	methanol oxidation to formaldehyde IV