        fdoG NONE
        fdoH NONE
        fdoI NONE
        fdhE NONE
        selA NONE
     SMa0013 NONE
        selB   11360 ..   11377 +  -5.5  -3.06796   AAGGCGAGCTCGCAC             GTGGACCG CGA CGG-CCGC             TTAGATCAAATCCAA  49 133
     SMa0017   12227 ..   12258 +  -8.6  -3.34233   GAGAATACTTACAAA      GCGCG-CTACGATCG TTC CGGGCGTCGTCGCGC      TTATGAAAATTGTAG  64 189
     SMa0018 NONE
     SMa0020   13880 ..   13891 +  -7.2  -3.53811   CTATCCGCCTCAAGG                GCGC CCCT GCGC                 TTTCGCCACCATCCC  60 205
     SMa5014   16242 ..   16256 +  -7.8  -3.57185   TCCTTTCCGGACGTC               GCCTGG CCC TCAGGC               TGTTATTTCCCTGGA  62 58
     SMa0036   23298 ..   23320 + -11.3  -2.73635   GCGTGAGACTGCCAC          CCGCGCGCTC TAAA GAGCG-GCGG           ATTTCGGGGAGTTTA  66 272
     SMa0041   25543 ..   25575 +  -6.2  -3.84514   GATCGAATCGACCGC      GCGCTCGAACGCAG CCTCA TTGCGTTCGGACGG      TTTGGTCGTTCCGCT  62 180
     SMa5015   27280 ..   27306 +  -4.2  -3.49668   CGGACCTGTGTCTGC         GCCAATCGGCTC TTC GTGCAGGTCGGC         TTCTATGACGACTTT  51 151
     SMa0050 NONE
     SMa0052   28191 ..   28204 +  -3.1  -4.64766   TGCCGCCTCAGTAGC               CGA-CG ACG CGATCG               TTTTTCGGGTCTGCC  69 503
     SMa0062   33313 ..   33328 +  -2.4  -3.05715   TGGATGCCGCAGGCG              ATGCCC GTTA GGGCGC               TTCAGTCGAGCGGTT  41 15
     SMa0063 NONE
     SMa0064 NONE
     SMa0065 NONE
     SMa0067   37211 ..   37268 + -17.3  -3.07994   TCTTGCCCGAGCGAC TTCG-AGA-CTGGAGCGGGATGCGCGGC TTTCC GTC-CGCATCCCGCTCCGGCTCTCCGGA TTCGATCACGTTGAC  91 69
     SMa0070 NONE
     SMa0072 NONE
        fabG NONE
     SMa0077   40865 ..   40885 +  -2.5  -4.28361   CTCCTGTTTGCTGCT            GTGCGGA AAATCGG TGCGCAC            TTTTCCTGGAATTGC  62 173
     SMa0078   41969 ..   41990 +  -2.8  -3.17956   TCGGCAGTCCTGCGG           CCGGCCCG CCTGAT CGCGCCCG            TTCCTGCCGTCATTT  45 13
     SMa0079 NONE
     SMa0081 NONE
     SMa0082 NONE
     SMa0083   45077 ..   45095 +  -3.9   -2.7728   TCCTCGGCCAGATCT            CCT-GATG GCCA CATCCAGG             TAATTGGAGTTTCGA  43 21
     SMa0085 NONE
     SMa0087   46563 ..   46581 +    -6  -2.52464   CGGCACGCGGCGTTT             CACATACG TAG CGTATATG             TGAGTTGACAGGCGC  48 187
     SMa0089   47186 ..   47220 +  -3.4  -3.05384   GGAACTTGAGACCGA     GCCTCCGCATTTCTTC GTG GAAGGACGAAGGAGGC     TTAGGTGAAAACGGC  43 111
     SMa0091   48049 ..   48060 +  -4.4  -3.03701   GTTCCTATGTTCCGC                CATG ACTG CATG                 TCTCCTTTCATCGGA  47 154
     SMa0093   49026 ..   49045 +  -3.5  -3.64703   AAGCGGCTGGCGTTC            CGGTCTA GATCCG TTGACCG             TTTCACTGAAACAGC  52 18
     SMa0095   50271 ..   50289 +  -4.4  -3.72576   TCGGCAGAGGCAGGC             ACGAGGCG GCG CGCGTCGA             TTTCCTCGCGCGCCA  56 175
     SMa0101 NONE
     SMa0104   54548 ..   54575 + -13.4  -2.59431   GTAAGACCTTGAGGG        GGAGGGGGTAGC TGCG GCTGCCCCCTCA         TCGATTGTCGCGGCC  74 37
     SMa0105 NONE
     SMa0106 NONE
     SMa0108 NONE
     SMa0110 NONE
     SMa5001   58948 ..   58964 +  -5.7  -3.53091   GCTACCCCGATCCAG              GACGGCG AAG CGTCGGC              TTTCCAAAAGAGGGT  55 361
     SMa0113 NONE
     SMa0114   62807 ..   62856 +  -9.9  -3.66378   CCACCAGACGGACAT CCGTCGCCACGAGTG-CACGGC CGGAATT GCCGTGGTGATCGAGGCGTCGG TTTGGATAAACTATG  72 178
     SMa0116 NONE
     SMa0117   64454 ..   64465 +  -4.4   -3.1811   GCCAGCAACATTAGC                TACG ACAT CGTA                 ATTTGTTATCGCAAA  49 27
     SMa0118   65688 ..   65712 +  -5.7  -4.39386   ATCTGATAATTGGGA          GCGCTCC AAACCAACACC GGAGCGC          TTTTCATGCTTTGCC  69 507
       cspA8   69073 ..   69092 + -11.4  -4.21936   CAAGAGGTTCGAAGA            GGCCAGGC GAAT GTCTGGCC             TTTTCCCATTCTACG  88 84
     SMa0128   69526 ..   69550 +    -7  -3.05844   CGTAACACTTCAACA          CCTGCACCCG ATCCA CGGGCGCAGC          TGTTGCCCTGGCGGA  54 36
     SMa0130 NONE
     SMa0132   70974 ..   70988 +  -2.1  -3.67564   CGCCCCAAGGGGACA              TGG-GG CGCG CCACCA               TTTGAGTCGATGCTT  51 44
     SMa0136   74296 ..   74315 +    -2  -2.60571   GACTAGATCATAAGA            TGCCGC-CG GCA CGTGCGGAG            CTTACTTACGGCGTT  38 35
     SMa0137   76676 ..   76694 +  -5.3  -3.75738   GCGCCGCGCCGCCTC            GATCG-CG GCGA CGTCGATC             TTCTTCATGGTCATC  58 122
       rpoE6 NONE
     SMa0144   80343 ..   80364 +  -7.2  -4.07885   CCGGCCGTTACTCCT           GCGGACCG AAGAAC CGGTCCGG            TTTTCACAAGGAGTA  70 79
     SMa0149   82782 ..   82803 +  -2.9  -4.09685   TATGAAGAAACCATC           GGCGCGG AACTCGCC CTGCGTC            TTTTCGGGCATGCGC  58 467
     SMa0160 NONE
       pilQ2 NONE
     SMa0164 NONE
     SMa0166   91589 ..   91600 +  -7.2  -3.73534   ATGGCGTCGGTTTCC                CGCC GCCG GGCG                 TTGTTGATCCGCTTC  63 45
     SMa0168 NONE
     SMa0169   93436 ..   93459 +  -2.3  -3.35542   AGTTCCGGTCCGTTC          GAGGCGGTG GAATCG CGGTGCCTC           CTTTTTGCGACTGCA  46 150
     SMa0172   95601 ..   95633 +  -3.1  -4.13767   GCGCCAAGCAGCAGG      CGACCGAAGCCGCCG ACA CGGCCGCTGCCGCAG      TTTTCCAGTGGCGCG  60 233
     SMa0180  100361 ..  100403 +   -28  -3.03338   CGCGTAGCCTCATGG ACAGAGCGCCTCAGTGTTTC AAT GAAACACTGAGGCGCTCTGG TCTTGCCGGAATTCT 100 79
     SMa0185  102603 ..  102619 +  -2.9  -3.39862   GGTCTCGCCCAAACC              TTTTGGC CTC GCCAACG              TTCTACCTCCTTAAT  47 120
     SMa0187  103696 ..  103727 + -12.2  -3.73224   TGCGGAATTCCCGAA      GGACCGTAGCGGCG GGAA TGCCGCTTCGGTAC       TTTGGTAGGCGCTGC  81 119
     SMa0189 NONE
     SMa0190  105630 ..  105641 +  -5.8  -4.16016   GCCATGGAGAGCCCC                GCGA CCAA TCGC                 TTTCTTGCCAAGTGC  66 466
     SMa0204 NONE
     SMa0206 NONE
     SMa0209  115907 ..  115919 +  -4.7  -4.15833   ATGTAAGCGATGGCG                GCCGC TTC GAGGC                TTTTGCACTCCTCCT  65 175
     SMa0222  123187 ..  123216 +  -6.3  -2.66291   CTCGATCTTCGAGGG       TCGG-GCCGCTCCC CGC GAGTGCGGCGTCGA       TCATCTCCGTCTGTC  48 434
     SMa0224  125038 ..  125058 +  -2.6  -2.77899   GTGGCGTGGCTCTGG           CTGCCGAGCA AAT TGC-CGG-AG           TAATTACTCCCAACG  39 2
     SMa0226  126284 ..  126307 +  -3.8  -2.64803   GGAATTTGCGGCCCT          ATTCGAGGTC CGGT GGCTTCGAAG           TGCGTTTCCGCCTGC  42 56
        gdhA  127786 ..  127841 +  -7.5  -3.17392   GCCGGGGGCGATCAA GCCGTTCGGGGTGCGTGCCGC-GGTGT TTCC GCACTAGCGGCACTGACCC-GGGCGAC TTGACTTCCCCGATG  56 45
     SMa0229  128608 ..  128642 +  -9.9  -2.59971   CACCGCAGGCTCGTA    GCCCTGTGCCGAACCG CTCG CGGC-CGGCGCAGGGA     GTTCCTGTCTCGTCA  60 126
     SMa0232  129449 ..  129463 +  -4.2  -2.79831   CGCGCGCCATAGCGT               TTGCGG TAC CCTCAA               TATCGTAGGGATTGA  42 196
     SMa0244  136370 ..  136388 +  -3.8  -3.40403   GGAGATGATCATGAA             TCCCGGTT GTC AACTGAGA             TTCTAATAGGGAGAG  49 1
     SMa0246  137231 ..  137272 +  -7.4  -2.65354   AAGTCATACTAGAAG CAGGTCATCTCGTTGTCAG ACATC CTGACAAT-AGAGGACCCG TACCTTTGAGGTACG  50 137
     SMa0247 NONE
     SMa0249  139005 ..  139016 +  -2.2  -3.17219   GACTCTTGAGCAGCT                G-GCG GAG CGCAC                TTAATGACCCTTGTC  41 10
     SMa0250 NONE
     SMa0252  141408 ..  141431 +   -16  -4.47551   TATGCCTTCCAGGAA          GCCCACGGTC GACC GGCCGTGGGC           TTTTATCGATTCCGT 100 80
     SMa0254  142182 ..  142194 + -10.5  -2.93073   TATGCAGGCAAAAAC                GGCCG TCC CGGCC                TGATTGTTGCCGACG  64 10
     SMa0255  143370 ..  143414 +  -7.1  -2.62579   CCGGCGCAAAACGAT CCTAGAGCATTTCCGCTTTTC TCC GAATTGCGGAAACGCTCTACC CCTTTGTTTTGCCGC  50 91
     SMa0267 NONE
     SMa0270 NONE
     SMa0271 NONE
     SMa0273 NONE
     SMa0275  155456 ..  155484 +  -4.4  -3.14132   GAGATCGACGACGGC        GTGCCCTCGGGT GGTCG GCCCGAGGGAGA        TTGCTGCCAAAGCCA  47 53
     SMa0281  158789 ..  158799 +  -3.2  -3.60627   GTGTCCCATCCTGGC                 TTCC TTT GGAG                 TTTGAGCTCGGATCA  49 10
     SMa0291  162338 ..  162370 +    -5  -3.02043   TTGCTACGATCATTT     GTGACATGA-CGAAA GGCT TTTCGATCATGATAC      TCTTAGGAACGCCTT  47 379
     SMa0303  170347 ..  170362 +  -2.4  -4.18018   ATCGAAGGATGTCGG              CTGCGC CAGC GCTCGG               TTTTCCGTCGCCAGC  59 430
     SMa0308  174069 ..  174087 +    -6  -3.62597   AGGCGGATCCGTGAA             GAGGCT CCACAAC AGCCTC             TTCTTCCGCGGTGAC  58 72
     SMa0312 NONE
     SMa0314  176134 ..  176166 + -20.7  -2.90309   CAGTAGCCCAGAAAT      GATCACGCCGGCATT ATC ATTGCCGGCGTGATC      TCCTCTTCTTTCGCC 100 35
     SMa0316  177792 ..  177830 +    -3  -4.75288   ACTTGCGACGTTGAT   GTGGATTTCATCTGCCTC AAA GAGTCAGAAGAGACCGGC   TTTATTTTCCTATCG  73 348
     SMa0319  179039 ..  179051 +  -9.1  -3.21695   CCCCGAGAGAAGGGC                GCCGA CGA TCGGC                TTAAATTCCTCCTCG  63 90
     SMa0320  179874 ..  179919 +  -9.6  -2.64099   GGGTTGGTAACAGAC CGGCCCTGAAGGGTCCCTGC CCCAAT GCAGGGACCTCTCAAGGGAG ATTGTCATGAAGGAA  60 31
     SMa0322 NONE
     SMa0323  180830 ..  180849 +  -4.9  -2.60615   GCAAGATCGCGACAG            CTCCCGC AAAGGC GCGGCAG             ATCTTTCCCAGGCAT  43 46
     SMa0325 NONE
     SMa0326 NONE
     SMa0329  182913 ..  182942 + -18.7   -2.8478   GGCAAATGAAAACGC       GAGAAGCCCGGAC CATC GTCCGGGCTTTTC        CTTTGATCGGGTGGT 100 32
     SMa0341  186912 ..  186922 +  -8.2  -3.29147   CGCCGCCTACTTGCC                 CGGC TTG GCCG                 TTGCATTGTCTTCAG  59 219
     SMa0347  189158 ..  189200 +  -8.4  -3.24021   AATCTTGATGAAATC GTCAAGACGGCTCGCCGGT CTGAAC ACAGGCGAGCCG-CGTAAC TTCAGTCTTTCAGCA  63 290
     SMa0353 NONE
     SMa0355  192501 ..  192514 +  -8.1  -2.60194   GGAAGGGCCGGATTG               GGCTC AATC GAGCC                GTTCATTGCGCCCCT  53 110
     SMa0364 NONE
     SMa0367  197843 ..  197859 +  -3.5  -3.87149   AGTGCTAGACCGGCT              CGACGCC CTC GCCGCCG              TTTCGGTTTCCTCAG  55 60
     SMa0369  198493 ..  198535 +  -9.9  -3.07816   CGGTCCGTGCGGTTC TGGT--CCGCCCAGGTCACCG CCA CGGTTGCCTGGTCGGTCACCA TTAGGTCGGTCGAGA  64 346
     SMa0374  201074 ..  201105 + -23.8  -3.06302   TGAGAGTTGGAACGT      CAGCGCCGCGATCC GAAA GGGTCGCGGCGCTG       TTCCGTCCAAGTGCT 100 51
     SMa0376  202067 ..  202096 + -21.5  -2.71712   GTAAGGGCCTGATCC       GGCCGCTCCGATC ACCC GGTCGGAGCGGCC        CTTTCGCAACCGGAG 100 37
     SMa5018 NONE
     SMa0380 NONE
     SMa5019 NONE
     SMa0383  206733 ..  206769 + -10.9   -3.0353   GCTTGTCGTGGGTGA   ACGAGGGCGCTC--CCC ATGAC GGGTTGAGCGCCCTCGG   CTTGTTTCTCCCACG  69 170
     SMa0389  211079 ..  211090 +  -5.8  -3.15231   GGGTGCAAACCGTAC                GACG GACC CGTC                 TTGACTGCTTGTCAT  49 74
     SMa0391 NONE
     SMa0392  213626 ..  213655 + -19.3  -2.72471   AGGGCTGATGCCTTA       TCTGCCCGCCGCA CCCT TGCGGCGGGCAGC        CTTCTCTCGTGAAAC 100 33
     SMa0394 NONE
     SMa0396 NONE
       hisD2 NONE
     SMa0400  217798 ..  217821 +  -3.8  -2.90723   AGACGATCATCGAGG          TGGCGGG-CTG AAC CGGATCCGTCA          TGTCATTCCGAATGC  44 15
     SMa0402 NONE
     SMa0403 NONE
     SMa0404  221086 ..  221102 +  -9.3  -5.00616   GTCTCGACACTCTGA              CGGAGCG CCG CGCGCCG              TTTTTTAGGGCCGGG 100 26
     SMa0405  221837 ..  221849 +  -6.9  -2.61681   ATGCGATCAGCAGCA                CGCGG TGA CTGCG                CTTCTAAGATTGGCC  50 137
     SMa0407  223214 ..  223236 +  -4.1  -3.04144   AAGCGTGCCGCAGCT           TCCCGTC ATCGGTCCA GGCGGGA           TATTCAACCTCAGCG  45 373
     SMa0414 NONE
     SMa0417 NONE
     SMa5020 NONE
     SMa0421 NONE
     SMa5021  229454 ..  229466 +  -4.7  -4.08221   GGTTCTTGCCCTTGA                GCGGC ACG GCCGG                TTTACTTGTCTTCAG  63 224
     SMa0433  234454 ..  234464 +  -3.2  -4.56775   ATTCCCCCTGTCCGA                 GTTC GCC GAGC                 TTTTTGCCGGGAACT  69 449
     SMa5022 NONE
     SMa5023  236906 ..  236916 +  -6.8  -3.29471   TGCGAACTGATGAAC                 TCGC GCG GCGA                 TTGATATCCTAAAGC  55 137
     SMa0447  240000 ..  240031 + -14.4  -3.41341   GCTTCCCGTGAGACA      TCGGTGAAGGCGCC CATC GGCGCCGTCACCAA       TCTTTCGATGCCGTT  87 376
     SMa0450  241362 ..  241392 + -16.2  -3.71649   GAGCCGACCTGAGCA      GGCAGCGCCCTGC CTCGCC GC-GGGCGCTGCC       TTTACAATTTCGCCG 100 115
     SMa0453  243931 ..  243943 +  -4.7  -3.52877   AGGATTATATAATTC                CGGCC ACA GACCG                TTATGATGTATTCGT  53 394
     SMa0461  246372 ..  246382 +  -6.8  -3.05914   TTTGGTCAGCGGCAT                 TCGC AAC GCGA                 TCTCTATGGTTGCGT  54 79
     SMa0466  253642 ..  253655 +  -2.3  -4.19276   GAGATGGTGCGCAAG               TAGGC GGCC GCCCA                TTTTCCACGTTTTCG  59 42
     SMa0467  254918 ..  254936 +  -2.4  -3.00128   CGACGGAGGAAGCAG             CCATTG CCCGTAC CAGTGG             TCGTTCTCTTTGCTG  40 64
     SMa0469 NONE
     SMa0470  257929 ..  257945 +  -2.1  -4.06678   GTAGCGACTAGCCGA              GCCCCAA ACC TCGGGTC              TTTATCTGCGTGGCT  56 392
     SMa0471 NONE
     SMa0473  258908 ..  258920 +  -2.6  -4.82901   GTATTTGGAATTATT                GCGT AAAAC GCGC                TTTTTGTGCGGGCAA  70 110
     SMa0475 NONE
     SMa0476 NONE
     SMa5024  263045 ..  263068 +    -6  -3.54424   CGGTGGCCTTCGTAT          CACCGCCAAGA ATA TCTTGG-GGAG          TTTCAGAAAATCGCC  58 396
     SMa0496  271118 ..  271135 +  -3.3  -4.21438   GAGACCTGCGGGAGT             GCGCGTA CGAT TGCGCCC              TTGTTTGTTCCGATG  61 164
     SMa0499 NONE
     SMa0501  273407 ..  273444 +  -5.6  -2.63616   CGCGCCGCCGCCTGC  TCGGGAGGGCCTGAGATG CGCA CGT-TC-GGCTCCCCCGA   ATTCCTGTTCATCGT  46 12
     SMa0503 NONE
     SMa0506 NONE
     SMa0508  275714 ..  275727 +  -2.3  -2.83403   CGCGGAAGTAGGCTG               AGCCT CGCG AGGCA                GTTTCGTCCGCCCCA  39 25
     SMa0510 NONE
        idnD NONE
       idnO1 NONE
        idnK NONE
     SMa0516 NONE
     SMa0518  280615 ..  280630 +  -5.4  -3.71279   TTGGCGTTTGATTTA              TGCAAG CCGA CTTGCG               TTCATTTTACATCTT  58 306
     SMa0520  281537 ..  281557 +  -2.5  -4.17023   TTGAGGGACGCTGAG            CGCCG AAGGGGGGTGG CGGCG            TTTTGGCATGCTTGG  59 27
     SMa0522 NONE
     SMa0523 NONE
     SMa0525 NONE
     SMa0526 NONE
     SMa0527  286698 ..  286721 +    -3  -3.05816   ACTATCTGCTCTGCG          ACGCTTTCGCC ACT GGCG-ACGCGC          TTGGGTACGAAATGG  43 505
     SMa0537 NONE
     SMa0538  288901 ..  288915 +  -8.5  -4.08945   ACGAAGGATCTGGAC               CGGCG GTTGA CGCCG               TTTTCGCGGCCTGGT  75 223
     SMa0541 NONE
     SMa0543  291044 ..  291070 +  -3.6  -3.14211   TCGTGACGGTGATCC         GAGCGCTCTT GAGCCGG AGGGGCGCGC         TTGGTCGCGGCGACT  45 112
     SMa0551 NONE
     SMa0552 NONE
     SMa0554  294953 ..  294963 +  -6.8  -2.73903   AGTGGTACTTCGTCC                 GTCG CCG CGAC                 ATTTCGACCGATTTT  51 110
     SMa0558 NONE
     SMa0559  297874 ..  297888 +  -2.8  -3.61398   CGTGATGCCATGCCC               GATGCT CGA AGGATC               TTCTTCGCCGGCGCG  49 108
     SMa0561 NONE
     SMa0563 NONE
     SMa0564  300511 ..  300527 +  -5.8  -3.36991   GCGCTCAGCCTGAGA              CTTCGG CAATC CCGAGG              TGTTTGACCATCATG  53 49
     SMa5026 NONE
     SMa0567  301826 ..  301836 +  -4.6  -4.03234   AGGCCGTCTTGAAGT                 TGCG CCT CGCG                 TTTATGTAGGACGAC  62 90
     SMa0572  305329 ..  305348 +  -3.6  -3.07307   CGCGCGCTCAAGAAC            TTGCGCGAT CCC ATC-CGCGA            TTGCGTCAGCCTTTC  43 474
     SMa0575 NONE
     SMa0576  307523 ..  307548 +  -4.6  -3.15758   CCGGAAGCTAGGGGG         TGCCGCGATG TTTGAC CGTCTCGGCG          TTCGTGGCAGATTGT  47 209
        cyaN  310201 ..  310220 +  -4.9    -3.767   CGCGGCTCAGGTTTG            GTTGCGC CGACAA GCGCACC             TTTGATGGCTCCATC  56 237
     SMa0590 NONE
     SMa0591  315054 ..  315065 +  -2.2  -4.62336   CGGACAAAACGGCCT                TCCG CGAA TGGA                 TTTTTACGCTAGAGT  66 93
     SMa0592 NONE
     SMa0594  317560 ..  317582 + -14.9  -3.55444   TAATCTGGTACGCAA           GCCGGCGTT GCACA AACGCCGGC           TTTGAACCCTCAAGA  88 126
     SMa0604 NONE
     SMa0606  323551 ..  323562 +  -2.2  -2.71681   GGCCGCTACGTCGTC                GTCT ACGT GGAC                 TGATTCCAGCAATTA  39 11
     SMa0607 NONE
     SMa0609 NONE
     SMa0610  326644 ..  326659 +  -3.2  -3.07013   GGGACATGGCAGCCA              CCCG GCGTGAAA CGGG               TCTCTTAGAGACATG  43 2
       fixN3 NONE
       fixO3 NONE
       fixQ3 NONE
       fixP3  330497 ..  330514 +  -4.7  -2.72745   CTCCTAGCCTGGTGG             GGCCTCG TCGC TGCGGCC              ATCTTTGTCGGTGCC  44 73
     SMa0620 NONE
       fixI2  333733 ..  333754 +  -2.4  -2.82635   ACCAAACCAGCCACG           GCAAAGATA TGAAT TATCTT-GC           TCTCCTCGTCCCGGT  39 14
       fixS2  334150 ..  334160 +  -2.4  -3.55563   GGTATCGTTTTCCTG                 TCGG ATT CCGC                 TTTCGGGGCTGCCGT  47 174
     SMa0625  334777 ..  334789 +  -4.7  -3.84825   CCGTCTTGCCGCTTT                GCGCC GGT GACGC                TTTGCTATGGGTCGG  59 208
     SMa0626  336551 ..  336569 +  -5.8  -3.06361   TCGCTCGGCGAACGA             CCCGGCGC TGT GCCGCGGG             TGTCTATAATTGCTA  49 197
       aqpZ2  337747 ..  337757 +  -4.6  -3.69434   TCACTCGAGAACTTC                 CCTG CGG CGGG                 TTTCGAATTCGTTAC  56 308
     SMa0636  342237 ..  342249 +  -7.7  -3.39529   AAGGAAGAATCTCGA                CCGAA GAC TTCGG                TTGCTATTGAATTGG  61 110
     SMa0637 NONE
     SMa0638  343569 ..  343606 +  -4.9  -2.79912   GGAACCCTGCAGAAT   TCTAAGCG-TTACGTAGG GGC CGCACGTAAGCGCTTCGA   TCGATTCTTTTTGGC  44 359
     SMa0639  344072 ..  344083 +  -5.8  -3.72695   GGCCGCTCAGCGCGT                GTCC GGCA GGAC                 TTTCATGGCGAGCGT  58 53
     SMa0640  344678 ..  344693 +  -3.9  -3.70068   TGCGGTATCTTACCG              GCTGG CCCCTT CCGGC               TTTGCCCTTGTAATC  54 149
     SMa0643 NONE
     SMa0645  346039 ..  346052 +  -2.3  -2.84634   CCCGGTCGCGCCGGC               ACTCG GGAA CGAGA                TCTGCTCGTCTACGA  39 72
     SMa0647 NONE
     SMa0649  346746 ..  346763 +  -3.4  -4.07568   GCGCCGCCGCCCGTA             GGCATCG CAGAA CGA-GCC             TTTTCCAGCAGCGAC  58 112
     SMa0657 NONE
     SMa0659  350108 ..  350118 +  -6.8   -3.1506   TGGAGAGTGCACGCC                 GGTC ACA GACC                 TTCATGAAGAGCTTT  54 112
     SMa0661  350991 ..  351012 +  -4.4  -3.85698   AGCGCCATGCAACTC           GATGAAGC CCCTGT GCTTCAGC            TTTGTCAGCGAGCGC  58 149
     SMa0664  353936 ..  353948 +  -5.5  -3.16921   CAGCCCTTCCGATCC                TACGG TGT CCGTG                TTCATCCAGATTAAT  51 119
     SMa0667 NONE
     SMa0669 NONE
     SMa0670  358518 ..  358528 +  -2.4  -3.96624   TGGACACCTTCACTG                 CGGC CAG GGCG                 TTTGTCATGACGATG  56 330
     SMa0673 NONE
       arcA1  376961 ..  376973 +  -3.3  -2.67244   CCGGGTTTCAGCAAA                TGGAG CAG CACCA                TGAGTTTCAATCTCC  40 49
        arcB NONE
        arcC  379128 ..  379148 +  -2.6  -3.65351   CTGATAATTATGCTG           CGAGATGCGG CTT CCG-ATC-CG           TTTGACTGAAAGTGG  51 199
     SMa0699  379998 ..  380027 +  -6.3  -3.40403   CGGCAAGGCGGTGTT       CGCTACACTGTCG GCGG CGACAATGGCGCG        TTCTGGTCGACCCGC  56 380
     SMa0702  380558 ..  380568 +    -4  -3.71487   TCGTCATCCTGCCCG                 TGAT TAC ATCA                 TTGTTCAGTGTGCTG  54 100
     SMa0707 NONE
     SMa0708 NONE
     SMa0709 NONE
     SMa0710 NONE
     SMa0711 NONE
     SMa0713 NONE
     SMa0714 NONE
     SMa0715 NONE
     SMa0717 NONE
     SMa0719  391773 ..  391793 +  -3.2  -3.68351   GTCGTATTCGATTGT            GTCATGCG GGTAG CGCGTGAA            TTTCGCTGGTGGAAC  52 47
     SMa0722  392469 ..  392512 +  -3.9  -3.53761   CAGTTTAAAAGCACT TCCGATCG-GGCCCTGCTG CGACAGAT CAGCATGGCTGCGG-CGGA TTTGGCGGGGACTTG  51 33
     SMa0723  393718 ..  393738 +  -3.1  -4.54727   CCGCAGCCAAATCAT            CCCCTCACC ATC GGTGGTGGC            TTTTCGTTTCGAGGA  66 456
     SMa0726  394570 ..  394581 +  -7.2   -4.0371   CCCATCCGGCCGGCT                GCCG AGCT CGGC                 TTTCTCTGGACCGTA  68 326
     SMa0728 NONE
     SMa0731  395756 ..  395768 +  -3.3   -3.2032   CCAGCTATCCGGGGA                CTGGC GTT GGCAG                CTTTTCATGTCCGGC  45 202
     SMa0734 NONE
     SMa0736  396552 ..  396567 +    -6  -4.81249   ATATGCAATCACGGA              AGCGGG GGAT CCCGCG               TTTTTCGCTTTGAGC  82 192
     SMa0740  398057 ..  398083 +  -4.5  -3.41222   CTAATGTGTCTCTAT        CGATCAC-GG AGGCCTGG CCAGTGATCG         TGTTTGAGCTTGCCG  51 37
     SMa0747  401769 ..  401784 +    -9  -3.47227   GACCAAGCAGTATGA              CATCGG CATT CCGATG               TTCTGCTCGTTCAGA  64 26
     SMa0748  402823 ..  402848 +  -8.2   -3.0634   TTTCCGCCTCGATTA         TGCTGCCGCC ATCATC GGCGTCAGCG          TGTTGAAGTAAGCTT  57 261
     SMa0751 NONE
     SMa0752 NONE
     SMa0753  407506 ..  407520 +  -5.6  -3.09492   CTGTGAGGAAAAGTG               GACCGG CGA CAGGTC               TATTAGAGTTCACGA  49 35
     SMa0754  408199 ..  408212 +  -3.1   -3.0814   GTCAACCAACTTAGT               TCGAA ACGG TTCGG                TGTTGCGATGTCGGT  43 118
       nodD2  410216 ..  410226 +  -3.2  -4.62471   CCAGAAATCAACCAT                 TCGA GAG TCGG                 TTTTTGACGCTTGCC  69 55
     SMa0758  411751 ..  411778 +  -2.7  -4.14541   GGCATCCCAACTCGA        ACGATCG-GGAC TGAGC GTCCACGATTGG        TTTCTCTGCTTGATC  59 94
     SMa0759  412299 ..  412310 +  -7.2   -3.1505   GCAATGCGGTGCGTT                GCCG CAAG CGGC                 TTAATGGCGGCTCGT  54 10
       fixT2  412764 ..  412783 +  -2.8  -2.81547   CGAATTGGCAATCTG            TCCCCGCAT CGA ACG-GGGGA            TAATTCATGTACGCC  41 79
        fixK  413419 ..  413433 +  -3.4  -2.71731   GCTGCGTTCGCTCTG               CAGCTG AGC CGGCAG               TGGTTGCGCGCTCAG  41 19
     SMa0763  414097 ..  414112 +  -2.5  -2.57211   TGATCTGAATCAAGG              TGCCG AAGCTA TGGCA               ATTCTCGAACGACGT  38 38
       fixN2  415809 ..  415823 +  -3.5  -2.61383   ACCGGCGGAATAGGA               GGGCA GATTA TGTCC               ATTCTCGATAAACAT  40 28
       fixO2 NONE
       fixQ2 NONE
       fixP2  417632 ..  417646 +  -4.2  -3.67597   TGGCCGGCGCAGCGA               CTTCCC TCT GTGAAG               TTGTTCACTGCCGCG  54 77
     SMa0771 NONE
        nodL  419243 ..  419263 +  -2.5  -5.00616   CGGATACTGGAATAA            GATCAGATG GGC TGTCAGATC            TTTTTTAGGCCGGGA  74 372
        noeA NONE
        noeB  422866 ..  422901 +  -6.3  -4.66537   CGGACAGCGTGGTGT   TGCCTGGAACG-GACGCG CTT TGCGTCTCGTTC--GGCA   TTTTCTCTTCGGCAA  78 509
     SMa5028  425367 ..  425383 +  -2.2  -3.62518   AGGCAACGGGTAAGG              CCCGAT AATGC ATGGGG              TTTGGCGATATTTGA  47 111
     SMa0781  425932 ..  425952 +  -4.6  -2.60496   CGACGCACGCAATCG            CCATGTCG GAGAG CGGCAAGG            ATGTTTACGAAGCGC  43 46
     SMa0783 NONE
     SMa0785  428542 ..  428564 +  -4.1  -3.01712   TGCTCCCAGAACCGC          CACGAACAGG TGCG CCTGC-CGTG           TCTTGCCGGACAGCC  45 290
     SMa0789  430457 ..  430480 +  -3.8  -5.14563   GATCAAAGCGCTCGG          TTTGCGTTCG CCCT CAATCGCAAA           TTTTTTCCTACCAAA  81 346
     SMa0791 NONE
     SMa0792 NONE
     SMa0793 NONE
     SMa0794 NONE
     SMa0796 NONE
     SMa0797 NONE
     SMa0799  436926 ..  436946 +  -5.3  -3.53012   GGTCGCTCCGGCAGC            CGGAAAGCG GCG CGCCTTGCG            TTTAGGGAGGAGAAA  55 80
     SMa0800 NONE
     SMa0802 NONE
     SMa0803 NONE
       gabD4  441395 ..  441407 +  -9.1  -3.14454   CCAGAACGCTTAAAG                CAGCC TCA GGCTG                TCTTGACTGCTTTGT  60 149
       syrB3  442136 ..  442152 +  -2.1  -3.76413   GTCGTTCTCCGCGCT              ACGCGAG GGG CTCCCGA              TTTGGCATTTTCGCC  51 75
     SMa0809  442962 ..  442985 +  -4.4  -2.58714   GAGCCCGAGTTTCGC          GGATAGCCCC GGGA GAGGCTGCCC           TACCTTGATGTCGCC  43 20
     SMa0824  453308 ..  453318 +  -3.2  -3.86897   ACGCACGGCGGCAAT                 TCGT TGA GCGA                 TTTCTGACGCGTGAC  55 8
        nifH NONE
        nifD NONE
        nifK NONE
        nifE  459490 ..  459503 +  -3.7  -4.37886   TTTGTTAGAGGTTTG               CCCGC TGCA GCGTG                TTTTCTGCGCGATAC  65 348
        nifX  460428 ..  460465 +  -9.8  -2.72144   GAAAGATCTCAATGA   TCTCGCCGGCGGAGAG TTCCGC CGTTCCGCCAGTGAGA    GTTTAGGGCGAGTGC  61 290
     SMa0833 NONE
        fdxB NONE
     SMa5036 NONE
     orf10.5  462089 ..  462101 +  -3.3   -2.6063   AGCTTCAAATGATCC                GCCGA AGA TCCGC                TAAATTATACCTGGG  40 54
        syrA  462594 ..  462614 +  -7.5  -2.70932   CTTTCACCAGTTCGA            GTGGATGCC ATT GGCGTTCGC            TGCTTCGCACCGACC  51 163
     SMa0841 NONE
     SMa5004  465150 ..  465164 +  -5.7  -2.86728   CGACCAGTTCGCCTG               CGGAA GGAGG TTCCG               TGTGCTCTACATCGT  48 74
     SMa5029 NONE
     SMa0846  465898 ..  465914 +  -7.2  -3.06501   AGTGAAGTGCAGGGG              CGGCTG CTTAC CGGCCG              TTGAGTGAGGCTATG  54 303
     SMa0848 NONE
        syrM  467554 ..  467575 +  -5.7  -4.25104   CGCGCCTACCACATG           CGGCTGGGT CCAG ACACCGCCG            TTTTCGTCAACCGGC  66 181
        nodF  469894 ..  469908 +  -3.4  -3.05384   AGCCATCCGAGGCTT               GCTCAC TAA GGGGGC               TTGAATGGACAGGCG  43 7
        nodE  471113 ..  471126 +  -4.5  -2.61216   GTTCTGGCATTCAAG               CAGGT ATGA GCCTG                TCAGTTGCTTCCTCG  43 17
        nodG  472363 ..  472380 +  -4.8  -3.29324   TTTGAAGGCGGTCGG             GCCTAC GGATGA GTGGGC              TTGCATTTGCATACG  49 36
       nodP1  473649 ..  473660 +  -2.2   -2.7012   GAGAAAAAGAAGCGG                GAGG GCTA CTTC                 TGATGTCGTATGTTC  38 11
       nodQ1  475867 ..  475892 +  -4.7  -3.32963   GACCTTGCGAGCGCC         TATCTGGCGCT TCCG AGCGTGAGATG          TTATAGGCTGAACGT  51 304
     SMa0861  477022 ..  477040 +  -3.1  -3.35046   TACGATCGCCGTGGC            GCGA-GGG CCTT CTCATCGC             TGTTTCCAAGCGTGA  47 207
       nodD1  482978 ..  482992 + -12.8  -3.34192   CCTTTTCGGGTCGTG               GCGGCG CCC CGCCGC               TTCCTTCAGGCACTT  79 267
      orf110  483755 ..  483767 +  -3.4  -2.92475   AGACCGAAGAAAGCT                GATG GTCCG CATC                CTTTCTCAGACTAAA  42 24
        nifN  485112 ..  485146 +  -9.2  -3.15544   TATTCGCGCTCCGAT     GGCGGGTGCATCCAGA ACA TCGGGATGCATGCACC     TTCATCAAGCTGCCA  64 56
     SMa0883  493994 ..  494007 +  -3.8  -4.07885   TCGGAGGACGTGTCT               TCCG CGCCGA CGGA                TTTTCGCACCCGGTC  61 351
     SMa0887 NONE
     SMa0888 NONE
     SMa0890 NONE
       dnaE3  500668 ..  500700 +  -2.1  -2.92667   TAGAGCGCCGGAGCG    CGGCT--CC-TGGTCG TCAC CGACTAAGGTCAGCCG     TCATTTAAGGCTTCG  40 38
     SMa0894  501077 ..  501093 +  -6.5  -3.41053   GGGGTAGGTCGATAC              CGTAGTC GCT GACGACG              TTGTGGGTCATTTCG  56 34
     SMa0896  502242 ..  502255 +  -2.3  -4.18197   GACGAGATGAAGCTC               GGCCA GGCT TGGCA                TTTTCGATCACCAAT  59 313
     SMa0900  503113 ..  503142 +    -5  -3.89354   TCTTCCACCCCACCA      GCCCGG-TG-TCGC GACA GCGATCAGCCGGGA       TTCTTCGTTTGAGGA  59 117
     SMa0903  504400 ..  504421 + -14.4  -3.60792   ATCAATCCCCTTCAT           CGCCCGGC CATTGT GCCGGGCG            TTTCCGCATTCAGAA  88 68
     SMa0905  505057 ..  505068 +  -2.2  -2.51547   GTCTATCATATTGGT                GAGT GCCT GCTC                 GTATTCATCTCCGGC  37 234
     SMa0909 NONE
     SMa0911  508690 ..  508714 + -14.9  -3.06796   AGAAACCCTCCCTCA          GCCGCCCGGCG CTA CGCTGGGCCGC          TTCGCTGCGCTCGCG  85 236
     SMa0914  509739 ..  509754 + -11.8  -4.65078   GCAGGCTTCGGGAAG              CGGCGC GTAA GCGCCG               TTTTCTTGCAAATCT 100 16
     SMa0917  510523 ..  510547 +  -7.8  -3.53224   GCAGCAGACATCAAC         TCCCCGC-CGC GTCG GCGTGCGGGAA          TTTCGCGGCAACCTG  62 337
     SMa5006  511616 ..  511628 +  -2.7  -4.35747   CTCGAGCCGAAATTT                TTGAA AAA TTCGA                TTTCGTTTCTTTTTC  62 504
     SMa0922  512093 ..  512116 + -19.6  -3.64682   TGACGAGCCAAGCGA          GCGGCCCCGA GCAA TCGGGGCCGC           TTTCGCCGTTTCATC 100 38
       traA1  520786 ..  520800 +  -5.6  -3.36749   GCTGTCTCCCCCTTC               TGCGCC GCG GCCGCA               TTCCTCTTCGCGATC  53 499
     SMa0939  525096 ..  525111 +  -3.9  -2.75064   TCGCTTTGTCCTGCC              CCTCG CGCGAC CGGGG               TGATTCAGTGGGCCC  43 7
     SMa0940 NONE
     SMa0941  526412 ..  526423 +  -3.6  -3.26471   ACCGAAGTGGCCGGA                CGCC CGCG GGTG                 TTGGTGTCACCATGC  47 200
     SMa0943 NONE
     SMa0945  528868 ..  528879 +  -3.6  -3.68529   CTTCAACTGCCCAGC                GTGC AGAT GCGC                 TTTCCCTCCTGGAAT  54 149
     SMa0947  529534 ..  529551 + -12.7  -2.73124   ATCCATCAGCCATCG             GCCGCGA CCGA TCGCGGC              GTTTGGCAACTCGGA  73 95
        atrA NONE
        atrB NONE
        atrC NONE
        fabG  538671 ..  538691 +  -5.3  -2.58783   CTTTGAAGTTGGAGG            CCGGGTGCG AAA TGCATGCGG            GTGTTCTGATATATA  46 35
     SMa0961  539449 ..  539464 +  -6.1  -2.87931   CCTCTGAGCAGATGA              CCGCT AGGTCA AGCGG               TCTCTGAGCCGTAGG  51 70
     SMa0969  541891 ..  541920 +  -5.1  -2.59564   ACAAACGAAATAAAG       CTCCCGTACATT CTGTTCA AGTGT-CGGGAG       ATTGTCGAATGGAAG  43 170
     SMa0972 NONE
     SMa0974  543717 ..  543731 +    -7  -3.61398   GCTGTGGCGCCGGTT               GCTCGG CCG CCGCGC               TTCTTCGAGACGAGA  60 146
     SMa0990  549844 ..  549857 +  -5.9   -3.2614   CGACGGACATGATAT               GGGCG TTGA TGCCC                TTGATGTCGCCAGTG  51 42
     SMa0992  550378 ..  550392 +  -8.6  -3.43217   ATCAGTGAGCCAGCC               GGAATG TTC CATTCC               TTGCTTAGCTTTCGG  63 116
     SMa0997 NONE
     SMa0998  554098 ..  554125 + -10.6  -3.18429   TGAATGAATATCGAT        CGTGAG-CACGCT GGT GGCGTGGCTCGCG        TTCATGCGGCTTTTC  68 38
     SMa1001  555754 ..  555765 +  -3.6  -3.38786   CGGATCGCGTCGTTG                GTGC TTCC GCGC                 TTAATGTTGACTATC  49 146
     SMa1002  556504 ..  556533 +  -5.6  -3.86283   ACTGAAGTGCGCCTG       CCTCGGCGGATCG AGCAA CGTTCC-CCGTGG       TTTAATCTCGCTTAC  62 367
     SMa1005  557739 ..  557755 +  -4.4  -3.36803   GATGCTATGTCGACC             GCC-AGC AATC GCTCGGC              TTCTACGTAGCCTTG  51 124
     SMa1007  558640 ..  558683 +  -5.3  -3.31263   CCCATGCCCAACGAT CCCTCGGGCATT-CCGGG GACCGCAAG TCCGGCAATGTCCGGGCG TTCTGCGAGTAGCCT  50 411
     SMa1009  559350 ..  559373 + -18.2  -3.72027   GCGGCAGCCGCTAAA          CACGCGCCGT CGCA ACGGCGCGTG           TTATTGGTGAACAAT 100 47
     SMa1011  560504 ..  560520 +  -3.6  -2.87132   CGAATGGCGCAGGCT              GGCCGA GGAAA TCGGCG              TATCTCCCGAAGCGC  44 96
        actP NONE
        hmrR NONE
     SMa1017 NONE
     SMa1018  565699 ..  565716 +  -7.7  -4.32034   GAAGCTCACTCGTGG             TGCACGCC CTT GGCG-GCA             TTTTCGTGCTGATCA  77 69
     SMa1033  570195 ..  570208 +  -2.3  -3.30771   CGAACATCTGAATAG               GACCG CACC CGTTC                TTCTCACGGGTCTAA  44 30
     SMa1036 NONE
     SMa1037 NONE
     SMa1038 NONE
     SMa1041 NONE
     SMa1043  574172 ..  574197 + -14.7  -3.44586   AAGTAGTGAAACGAA         GGGACGCGGTC GGCA GACGGCGTCCC          TTATCCTCGCTTCAT  87 35
     SMa1045 NONE
       cyaE2  576013 ..  576037 +  -3.5  -3.44051   TCCACGCCAACGCAT         CGGCGCTGCG CGACTA CGT-GTGCCG          TTATCCTGGTGCCGG  47 432
     SMa1058  579965 ..  579977 +  -3.4  -4.55295   AACCACTTGTTCGAC                GATC CCCTT GATC                TTTATTTATCACGAA  66 306
     SMa1067  584652 ..  584662 +  -2.4    -3.376   GACCGATCGGCGTTG                 GCAG GAA CAGC                 TCTTCTGTGGTTGCC  46 485
     SMa1070 NONE
     SMa1073  587621 ..  587639 +  -8.9  -3.54424   GGCAGTCTGGCAGGG             TGCCCAT ACATA ATGGGCA             TTTACCCGGATGGAC  66 368
       nex18  589062 ..  589085 +  -3.2  -2.80816   TGTCATCGACAAGGT          GATCATGCC GCCGGAA GGC-TGATC          TCTCATCCCTCGAAC  41 4
     SMa1078  589342 ..  589382 + -13.9  -4.11216   AGAACCGATAGGGAC  TATGGAGGGCCTCGCTTGC CTC GCCGGCGGGTCCCTCCATC  TTTTGCAGATGGACA  95 30
        tspO NONE
     SMa1081  590379 ..  590394 +  -2.4  -4.07877   TCATCGGAGGCATTA              GCAGCT TGTC GGCCGC               TTGTTTCTGCGCTCC  57 336
     SMa1087 NONE
     SMa1089 NONE
     SMa1091  597559 ..  597573 +  -4.9  -4.33675   GCCAATCAATGAGGC               TGCCG CAGCA CGGCG               TTTTAATGATCTCAT  68 287
     SMa1093  598781 ..  598803 +  -5.5  -3.28712   CTCAGTCCGCACATG           CGGCTCGAG AAGCA CTCCAGCTG           TTGTCCAACGCCAAG  51 190
     SMa1095  599132 ..  599152 +  -2.4  -2.74523   ACAGAAGACAAGGAA            CGCTTGCC ATTGA GGCCAGCA            TCATGTTGACGATAA  39 45
     SMa1096  599968 ..  599985 +  -9.1  -4.27584   GCATTCGCGGCGCAT             TCGGGTC CTCC GGCCCGA              TTTTGACTTACAGAT  83 377
       cycB1  600556 ..  600575 +  -6.4  -2.64747   GACGGAGATGATGAC            TGCGCGGTG GAA CGCCG-GCA            ATTATGCTGCGGTGA  48 55
     SMa1100 NONE
     SMa1101 NONE
        cyaP  603952 ..  603964 +  -4.7  -3.89346   AAGCGGGAATGTCAT                GCGCC TAA GGCTC                TTTATGCGCTCCGCG  59 418
     SMa1111  605875 ..  605889 +  -3.4   -3.8646   CGCCGCAACCGGCTG               GTGACG GTC CGCCGC               TTTGCGTTGTTGCTA  55 270
     SMa1115  608122 ..  608133 +  -7.2  -3.17319   CCCGGGGCCAGGCCT                CGCG GCCG CGCG                 TATTCATCGATTACG  56 257
       hspC2  609219 ..  609262 + -11.9  -2.79183   CACTTGATTGTCCCC GCCTTCCCGTCCGC-AATG CTTCGACC CGTTCGCGGACGGG-AGGC TCTGATGGCAATCGA  70 34
     SMa1120 NONE
     SMa1122 NONE
     SMa1124  613954 ..  613964 +  -2.4  -3.78775   AACCCTCAGACTGTC                 CCCC AGC GCGG                 TTTCCTCATAAACCC  52 225
     SMa1132 NONE
     SMa1134  619564 ..  619574 +  -3.2   -4.0162   CGGAATGAGGCTTAT                 TCCG GCG TGGA                 TTTCTCCTATACCGG  58 33
     SMa1136 NONE
     SMa1141 NONE
     SMa1142  623641 ..  623657 +    -3  -3.75678   GCTGCACGTAATAGT             TCCTTGC CCAA GCA-GGA              CTTTTTGTTTGAGCG  52 71
     SMa1146  626455 ..  626474 +  -4.3  -4.19238   ATCAATGTAGCCGCC            GCCACCTG GCGTA CAG-TGGC            TTTTAGAATTCCAAC  62 46
     SMa1147 NONE
     SMa1149  628327 ..  628355 + -16.1   -4.0648   TGCTCTGCCACCCAA        TAAAGGCGCCACT TAC AGCGGCGCCTTTA        TTATTTGCTCTCATT 100 45
     SMa1153 NONE
     SMa1154 NONE
     SMa1155  632924 ..  632941 +    -4  -3.57971   GATACGGCCCCGGCG             GCCCAG TTCCCT CAGGGC              TTTGCAACTCAGTCT  51 42
     SMa1163 NONE
     SMa1166 NONE
     SMa1168 NONE
     SMa1169 NONE
       cycB2  642420 ..  642442 + -10.6  -3.88583   TTTGATCGATTGGAT           CGAGCCTGAA GCG TTCGGGCTTG           TTTGTCCAGCATTTG  76 63
        nosR NONE
        nosZ  649874 ..  649884 +  -8.2   -3.3382   CGCATGCTCGTGGAG                 GCGC AGG GCGC                 TTGATGTCTCGTCCG  61 11
        nosD NONE
        nosF NONE
        nosY NONE
        nosL NONE
        nosX  654658 ..  654674 +  -4.3  -3.06815   CTGCATCAGCGTCAG              CGGTTGG GGT CCACTCG              TATGTTGAAACCAGT  45 148
         fhp  656362 ..  656419 + -11.3  -2.71731   TCGGGTATCCTCGGT GCTCTA-CG-GACAAAGGCACCCCGCC TTCCAC GGCGGGGTGCCGTTGCCGCGCTTGACC TGATTGCCGAGTGCG  66 443
     SMa1231  675947 ..  675958 +  -2.2  -4.31433   GCTGCCCGTCTTGAT                GGTT AGAT AGCC                 TTTCTTCTCCCCGTG  62 16
        nnrS  686384 ..  686406 +  -7.6  -4.07885   AAGAGCATCACGAAC           TCGCCCGC TTAGACC GCGGGCGC           TTTTCGAGCAGAATG  71 73
     SMa1253  686981 ..  686995 +  -6.4  -4.72007   CCATGGTGGAAAAGT               TGCATC GCC GATGCG               TTTGTTTTGCTAGGG  82 287
     SMa1262  691558 ..  691581 +  -3.7  -4.09864   GCCGACTTCTGCGTG          CTCCCGAGC TATCTC GCCCCGGAG           TTTTGCCAAGTCGAT  61 465
        hemN  693855 ..  693882 + -19.2  -3.83026   AGCTGAGAACAGAAA        GGCCCGGCATGT ACGC GCATGCCGGGCC         TTTCATCTCGCGGCC 100 52
        nnrU  701203 ..  701252 +  -7.7  -2.68823   ATCAGCAATCCCGGG CGACGCCGTTCCTTTGGCGACGTG CCG CTCGACGCCAAGGTAGTGCCG-CG ATTGTCTAACCGGCC  53 322
     SMa1289 NONE
     SMa1291 NONE
     SMa1292 NONE
     SMa1294  706788 ..  706824 + -16.6  -2.78384   AGACCAAAAGTGAGA    CTACCGCCTGTCGACC GGATA GGTCGCGAGGCGGTAG    TCTCGTCGACACCGC  87 454
     SMa1299 NONE
     SMa1301  710983 ..  711037 +  -8.5  -3.35679   GCTGATGCCGTTGGG GAGCGTCTTCTCAAGGCTGCGTTGTG ATCA CGCG-CGCAGCCTTGAGTCTGCGATC TTATGGGTCAACACG  64 82
        rctA  722003 ..  722020 +  -6.9  -3.65046   CGCGGGCGAAGCCCG             TCGCTCC GTTA GGGGCGG              TTGTTCGCCTCGCCG  63 224
     SMa5030  731009 ..  731021 +  -6.3  -3.68351   CCGCCCGCATAGGAA                TTGGT TTG ACCAA                TTTAGATGATGCGCG  61 53
     SMa1337  732658 ..  732683 + -13.3  -3.68222   AACGCTAAGACACTA         CGGGAGGGGTGC CCG GC-TCCCTCCCG         TTCTTCAACTTGGCA  88 39
     SMa1339 NONE
     SMa1341  734738 ..  734749 +  -4.4   -3.2056   CGCTGTGCCAGCCAT                GGAA CCTG TTCC                 TTCATCGCTATGGAT  49 110
     SMa1344 NONE
     SMa1345  737478 ..  737502 +  -4.2  -3.04144   TTCATGCGCGCAATT         CGCTCGCGGCT TAAA AGCC-CGGTCG          TCTTGGGCGTGAGCG  45 468
     SMa1354  742437 ..  742449 +  -6.9  -3.06796   CTCCGAATGGTCAAT                TCGGC CTG GCCGG                TTGAGTCGGGTCAGA  54 353
     SMa1358  745637 ..  745659 + -14.8  -2.88215   GGCTGGCCGCTTTGT           CGGCAGCGTC GCG GTCGCTGCCG           TGCTGTTTGATGATG  77 375
     SMa1387  765356 ..  765401 +   -16  -3.28712   GTCGTTCGGCGCATA GC-CGGCATCGACGGCGGCGC GGGAG GCGCCGACGGCGGCGCCGAGC TTGTCGGCAACCGGC  88 269
     SMa1403  772083 ..  772114 +   -21  -3.53811   TGCGCCCTCTCCGAT      CGTCTTTCTCGGGC TTTG GCCCGAGGAAGACG       TTTGAAGAGGGTGCC 100 58
     SMa1410  777160 ..  777174 +    -7  -3.27525   CTTCCGCTCAATCAT               TGCCGC GAC GCGGCC               TTCCATTTCCGCCGC  55 464
     SMa1428  787439 ..  787453 +  -7.1  -3.05384   CATAGAGACCATCAT               GCGCA TGGTT TGCGC               TTAGATCACGACGAC  54 7
     SMa1445  797249 ..  797270 +  -2.1  -2.77547   GTCACTGTGTGCCGA           TGCGTCCCC GGGC GAGCACGCG            TGGTTCCCATTTGAT  39 52
     SMa1454  802778 ..  802788 +  -2.4  -3.53012   ATTGCCGCGCCATCG                 CCGG ATG CAGG                 TTTGAAAGCCCAGCG  47 461
     SMa1480  814981 ..  814997 +  -6.5   -5.0065   AACAAACGAAAATTG              CGAGATC AAT GACCTCG              TTTTATTTGTCCATC  86 104
     SMa1483  818054 ..  818064 +  -2.4   -3.1243   CCGCGGCGTGATCGA                 GGGG GAT CGCC                 GTTTGATTTTGAATG  43 521
     SMa1493 NONE
     SMa1494  824169 ..  824193 +  -7.7  -3.27617   TTCCGGTTGACAGCA          CGGCCCGCAGC TCG GTTGCATGCCG          TTGCTCAATTTGTTC  59 31
     SMa1495  825691 ..  825729 +    -8  -2.71364   CCGAAGCGATCGCGG   CAGTTCTGCCGTAGGGCG TAC CGGCCCACGCAGGAACTG   TCATTGGCGCAATCG  54 12
     SMa1505 NONE
     SMa1507 NONE
     SMa1509 NONE
     SMa1513 NONE
     SMa1514  836005 ..  836021 +  -4.3  -3.72051   TCGGTGCCTTCCGCC              GTCAGCG TCA TGCGGAC              TTTCAACTTGTTGCC  56 126
       nuoH2  837457 ..  837467 +  -3.2  -4.09554   TTTGGCGAACATAAT                 CATC AGC GGTG                 TTGTATTTTCTTGAT  58 1
       nuoI2 NONE
     SMa1521  838780 ..  838803 +    -3  -4.07568   CCCCGCCGCATCAGA          CTGTTGAGCC GCAG GGCGCGGTAG           TTTTCGGGAACGAAC  58 204
     SMa1539  851201 ..  851221 +  -3.9  -4.07568   CCTCCGGCCGATGCC            CGCCATGTC GCT GATGTTGCG            TTTTCCGGACGCGCA  61 346
         pcm  854095 ..  854108 +  -3.7  -3.13191   AGGCGCGCGTACCCT               GCCGC AGGA GAGGC                TGTATCTATTCTCCG  45 40
     SMa1548  857481 ..  857492 +  -3.6  -2.87564   GGAATTAGCCCTACA                CGTC TCGC GGCG                 TGTGTGGCACAATCC  44 69
     SMa1550 NONE
     SMa1552 NONE
     SMa1554 NONE
        mcpS NONE
     SMa1558  864230 ..  864244 +  -2.1  -3.29511   TCGTTTGAGGGACGA               GGATG GTACG CATTC               TTCTCGCGACATCGA  44 33
       cheB2  865441 ..  865460 +  -4.2  -4.38712   CGGCACGGTGAGCTT            GGGCGG AAGGGCAG CCGCTC             TTTTCTCGGCCTCGC  66 170
     SMa1579  874575 ..  874586 +  -2.2  -2.80816   AAGAGACGTCCAGCC                GTTG ACTT CGAC                 TGTCATCAATGCAGG  39 102
     SMa1580  875195 ..  875209 +  -5.6  -4.20531   AGTGAGGAGGCGTCC               GTCCGC CGA GCAGAC               TTTTGACTGAATCTA  66 97
        eglC  882346 ..  882366 +  -3.9  -4.20531   AAATCGCCAAACTTG            TTCCCTTAG GAA CTGCGGGGA            TTTTCAGTAACTGTC  62 354
     SMa1594  889837 ..  889850 +  -3.1   -2.8372   CAACTACCATGGTGC               GGTGCG ACG CG-ACC               CTTTGATCACAGATC  41 72
     SMa1595  890494 ..  890504 +    -4  -2.63913   GGCCCAATGATTCAT                 CATA CTT TATG                 TACTCTGGCCTGGTA  42 42
     SMa1600  893751 ..  893787 +  -9.4  -2.73994   CGCATCGCACCGGCC   GCGG-GCCGACGTCGCCA AAA TGGAG-CATCGGCTCCGC   TGATATTGCAGCAAT  61 184
     SMa1604 NONE
     SMa1606  897272 ..  897284 +  -4.7  -2.62184   GAGAGTATGGGGTTC                GGGCG ATA CGCGC                TGCTGTCAGCACCCA  43 401
     SMa1617 NONE
     SMa1619 NONE
     SMa1620  904529 ..  904550 +  -5.7  -2.87132   TCCTCACGCACCAGC           GGGGCGCCA TGCA TGGCGGCCA            TGTCTACGGGAAGGA  48 311
     SMa1626  906768 ..  906788 + -11.8  -2.91695   ACTTGTTCCCAAATC            GGCGGGTG GGAGG CGCCCGCC            TGATTTGCAGGTGCA  71 121
     SMa5038  907806 ..  907839 +  -5.9  -3.53091   CCTTGATGGCGAGCG     CCTTCGTCTTCGACG ACGG CGTCGGGCGCAAAGG      TTTCCGACAGCGCAT  55 188
     SMa1632  909337 ..  909367 +  -3.8  -3.96624   GTGACGCTCGAGATC       GTCAGCGCCTTGCG TGA CGAACGGCCGTGAC       TTTCTGCTCGACGTC  60 448
     SMa1636  912606 ..  912628 +  -7.6  -3.01791   CGGCGAANCAGTGCC           GGCCGGCGAG AAN CTTGTCAGCC           TGTTCGAACCGCCAT  56 42
     SMa1637  913472 ..  913511 +  -3.5  -3.19602   AGATCATCGTGCGAG  TGGTCGCCGTGCTCA TGGGAATGAC TGTCCACCGCGACCA   TCTTGGTCTGAGCCG  45 371
     SMa1639 NONE
     SMa1641 NONE
     SMa1643  915729 ..  915743 +  -9.2  -3.27022   AGGTGACACGCTACC               TGGCCG TGG CGGCCG               TTACTCTGAACTGGG  66 84
     SMa1644  916649 ..  916661 +  -3.3  -3.14881   GCCCGCCAGGACTGG                CCGCA GCG TGCTG                TTCGTGAAGGACTTC  43 187
     SMa5010  917211 ..  917232 + -15.9  -2.70932   CTCGCTCAAGAAAAT           GCCCGGTGT CTGG ACACCGGGC            TAGTTGGCGGGAAGA  86 233
     SMa1652 NONE
     SMa1653  924575 ..  924602 +  -5.4  -3.53091   AACGGTCGAACAGCC        TTGACGCTACGG CGTA CCGAAGCGCCCA         TTTGAAAGCGGCGCT  55 22
     SMa1654  925668 ..  925685 +  -7.7  -3.91196   CCTTTCGCTTCTGGG             CC-GCGGA ATT TCCGCTGG             TTTCGTATGTGTGCA  68 254
       arcD1  935103 ..  935113 +  -2.4  -3.90588   AGCGTCCGCACCTCA                 GCAG ACG CCGC                 TTTCATTGGCGAATC  53 406
       arcD2 NONE
       arcA2  938103 ..  938130 + -11.2  -2.78384   GCGGGAACACAACAA        GCACCGTC-GCCG GTG CGGCTGGCGGAGC        TCTCGTCGGGGCAGC  66 290
     SMa1672  939204 ..  939254 +  -6.7   -3.2963   ACGGTCTGTTCGCCC GCGGATCGATGCGTCGGCACCGTT GGAG ATTGTTGCCGACG-AGCGCGCCGC TTCTCGGAGCATAGT  55 333
     SMa1675  939989 ..  940012 +  -4.4  -2.59564   TTGACCCACATAGCC          GCGATGGCCG ACGA TGACCACCGC           ATTATCCGCTGGGCG  43 61
     SMa1684 NONE
     SMa1686 NONE
     SMa1688  952241 ..  952252 +  -7.2  -4.25104   TTCGAGGTTCCCGTG                GCCG AAAG CGGC                 TTTTGATGGGCCGCA  71 281
     SMa1691  954147 ..  954162 +  -7.5  -4.52589   ACGCATTGGTCGCAT              GGCCG CTGGTA CGGCC               TTTTATATGACGACG  76 190
     SMa1696  957261 ..  957275 + -12.8  -3.54741   ATCGTCTGGGCGTAC               GCGCGC TTG GCGCGC               TTTCGAGAGGTGCTG  77 500
     SMa1700  959605 ..  959615 +  -6.8  -3.19157   GCCAGCGAATTCGCT                 TCGG CGC CCGA                 TTGGTCGGCTTCGTC  53 461
     SMa1705  962476 ..  962500 +  -7.8  -2.89683   CCCAGATAGCTGCGT          CCGGGGCATG AAGTC TGTGCTCCGG          TATGTCGCCTACCGT  56 286
       argI2  964914 ..  964926 +  -9.1  -3.18681   ACACGCGCTCTTCTG                GTCGG AAG CCGAC                TTGATCGCATTCAGC  63 399
     SMa1720  971784 ..  971799 +  -4.6  -2.71416   GCCCGCGGGTCGACT              CTCAGG ACAC CCGGAG               CTTGTGTCAATCCTG  44 233
     SMa1725  973896 ..  973908 +  -3.3  -3.83437   TCGGATTGCTGAAAC                CTCTC AGC GGGGG                TATTTTCATTGCTCG  55 151
     SMa1727  975665 ..  975692 +  -7.6  -3.09004   GACTGACAAAAAGGG        TAATCCGCCGAC AACC GCCGGCGGATCG         TGGTTTTACAAGTCA  57 174
     SMa1735  981417 ..  981430 +  -2.3  -4.07568   CGAAATCTTAAAATG               GCGAT CTGC AACGC                TTTTCAGCGCAAGAA  57 102
     SMa1737 NONE
     SMa1747  991561 ..  991607 +    -7   -4.7373   GATCGGCAAAGCCGA GCTGCGCGGCGATGCTGGCAAC TGG GAGGTCGCTTTCGCCGAGCAGC TTTTTCGTAAGCTCG  81 166
     SMa1750  994350 ..  994366 +  -2.2  -2.91924   CCAGCGGCAAAGACG              GCGGTT CTAAC GACTGC              GTTTATGGCGAATGG  40 84
     SMa1760 1001773 .. 1001783 +  -3.2  -2.84812   AAAGCTCGTTCCCAA                 CCTT TAC GAGG                 TCTGATCATGTCAAT  41 10
     SMa1761 1003500 .. 1003521 +  -4.3  -3.25729   GCTATGCGGAAGCGG           GTCCTACGG AGCG CCCAAGGAC            TTCCTCATCGTTCTG  47 418
     SMa1767 1005360 .. 1005404 +  -6.4  -2.52464   TGCATTTGATGTGCT GGCGGACCCACGCTACC AAATGCCGCCGA GG-AGCGATGGTCCGCC TGAATTCGGAGCGCC  48 181
     SMa1769 1006104 .. 1006142 +  -9.5  -3.04144   GACGAGCTTCATCGA  TCACC-CGCCGCAGCCTT GCGC AAAGCTGCGGCGCGGCGC   TCTTGAAAGTGCGCA  64 300
     SMa1776 1008363 .. 1008377 +  -7.8  -5.24129   GGACAGCGCCCAGCA               TCTCGG CTC CCGAGG               TTTTTTCTCAACAGC  93 232
     SMa1782 1010992 .. 1011020 +  -7.3  -2.72661   ACGGATGCGCCCGGC        CGTCGAAAGCTCC GGT GGCGATCTCGACG        TCATTGCCCCTGATG  52 270
       cyaI4 1016251 .. 1016267 +  -2.2  -3.49186   GTGTTGTGGAACGAT              CGCC GGAGATCGA GGCG              TATGTTTTCTAGGTC  47 455
     SMa1793 1017577 .. 1017613 +  -9.4  -3.87869   GTCCCCCAACCTGTT    CAGAGTGCCCGCAC CCCTTCCTC GTGCGGGCACTCAC    TTTCTCCGCCCTTCA  75 240
     SMa1797 1019381 .. 1019405 +  -5.8  -4.19735   GGCCGAATTCCGGTC         TACAAACCGCC CTGC GGTGGTT-GTA          TTTACTTTTAAGCAG  66 493
        kup2 1021603 .. 1021635 +  -8.4  -2.77522   CACAAGTCGACCAAC      TGCAGCGCTCCT TTTCAATCC GGGAGCGCTGCC      CTTCTTGGCGCCTCT  58 198
     SMa1831 1039227 .. 1039247 +  -8.1  -3.37915   ATCGTCGAAGAAGCC            CCCGGCGGC GCC GAGGCCGGG            TGTTCGTTTATCGCG  60 303
     SMa1833 1041247 .. 1041257 +  -3.2  -4.34402   CCGGGGTGTCCAGCC                 TCAG AAA CTGG                 TTTTCGTGTGCGGCG  64 379
        argE NONE
     SMa1838 NONE
     SMa1840 1045083 .. 1045105 +    -4  -3.64703   CGCCAGTCGATGCAT           GCTGCTCGCG TTC CTCCAGTAGC           TTTGAGTGCAAGCCG  54 304
     SMa1844 NONE
     SMa1846 NONE
       gabD5 1049357 .. 1049384 + -14.9  -3.21416   ATCTCCAAGCAAGAA        GGGCGCGGCACC TTTCC GGT-CCGCGCCC        TTCCTCATAAGCCTG  87 240
     SMa1853 1052520 .. 1052532 +  -3.3  -3.25823   ACCAGGCGCTCGGCT                GATCC GGA GGTTC                TTGATGTACAGCAAC  45 24
     SMa1855 NONE
     SMa1857 NONE
     SMa1860 1056556 .. 1056595 +  -7.7  -3.90291   CCTGATTGAGCAACT  GGGCTGGGGG-GCTGCAA CCGCA TCGCTGCGCCCCCGGCAC  TTTGGTTCGAAACCT  68 36
     SMa1862 NONE
     SMa1863 NONE
     SMa1864 1060138 .. 1060152 +  -6.4  -3.32844   CGCGGAAACGGGAAA               GGGTGT GAT ACACTC               TTCTGCCCTGCCGGG  56 61
     SMa1869 NONE
     SMa1871 NONE
     SMa1872 1064589 .. 1064602 +  -5.2  -3.12327   GATGTTAGGCGCAGT               GCGC GACCTG GCGC                TGTTCAATCTCGCGA  49 162
     SMa1874 1065148 .. 1065175 +  -9.9  -3.06133   AAGGCCAACGTTCGA        CCCTGAGGAGA CCTTGC TCTCCTCAAGG         TTAAATGACCGCTTC  64 90
     SMa1881 1069242 .. 1069257 +  -6.8   -2.7264   GCATCCGGCTGGTCA              G-CGGGC ATA GCCCGAC              CTTTCGAGAGCCTTT  51 116
     SMa1887 1074917 .. 1074931 +  -7.8  -2.71364   CGCCGACCAGGGGCT               GCTCCG GGC TGGAGC               TCGTTGCGAAACTGG  54 81
     SMa1890 NONE
     SMa1891 1075827 .. 1075840 +  -3.7  -2.94912   AGTGACAACCGGTGT               CCGGC AGCT GCCAG                TGTCTCGCTTGCCGA  44 36
     SMa1893 NONE
     SMa1894 NONE
       msrA3 1077816 .. 1077841 +    -6  -4.08767   GTCCTACCCCGGCGG         TCCGCGGCCG AGTAAA CGGCCGGAGA          TTTTCGCGACCTAAA  66 11
     SMa1898 1079347 .. 1079369 +  -2.6  -4.74504   GACAACGATGCAAAG           GCCCAAACGG CTC CTCTTTGGGA           TTTTTGCGTTCCGCT  70 110
     SMa1900 NONE
     SMa1902 NONE
     SMa1903 1081930 .. 1081944 +  -5.7  -2.94144   CAGCGCTAACTTGAG               GCGAA TACAT TTCGC               TCGTTTGAGTGAAGG  48 155
        mrcB 1085426 .. 1085440 +  -2.8  -4.15222   TGATGTGGGCTTTTC               GGACTA TTG TAGTCG               TTTCTTCGGAACACT  60 300
     SMa1910 1087668 .. 1087685 +  -4.7  -3.28712   ATAGCGATCTCTTGG             GTCACCG GTGC CGGCGGC              TTGTAGCACCGGCGG  49 154
     SMa1913 1089277 .. 1089288 +  -7.2  -3.14211   AGACGATAGTGAAGG                CGCC CATC GGCG                 TTCCTAGCGACGCAT  54 32
     SMa1918 NONE
     SMa1919 1093259 .. 1093287 +  -4.4  -3.81488   CCCGTCTGACGAAAG        CACGCACGTTTC TCGCT GGAGCGCGCGCG        TTCTGTTTAGGAAGA  59 494
     SMa1927 1097399 .. 1097418 +  -3.5  -3.27298   CTTCGCGCCCTCATT            CCGGC CGTTTGGCAA GCCGG             TTCGTCGTTCCGAAA  45 405
       wrbA3 1100204 .. 1100216 +  -4.8  -3.49618   GCAGTCACCTTCAGC                CGGA GCTGG TCCG                TTGATTGTCTCCCAA  53 9
     SMa1937 1101529 .. 1101543 +  -5.6  -2.82933   AGCAAAGAATAAGAA               TGCGAC GGC GACGCA               TCTCCTCCGTTCCCC  47 99
     SMa1945 1105410 .. 1105420 +  -6.8  -3.03441   TAGGCACCGATCAGC                 CTCG CTG CGAG                 TATTGCAGCCTCCTC  54 395
     SMa1948 1106657 .. 1106684 +  -2.6  -3.42257   CCTTCATGAGCGTGG        CGGAGTCTCCGTC TGG GAATGGG-CTCCG        TTGCTGTCTTTCACG  46 151
     SMa1954 1111056 .. 1111075 +  -4.2  -4.12043   TTGATTGAGGAAGGC            GCCTGGTCG AGG CGAGC-GGC            TTGTTTAGTTGATTG  62 238
     SMa1957 1113481 .. 1113495 +  -5.6   -3.8377   TAGTCGTGGTCAGAC               GCCGCA GAA TGCAGC               TTTGCTCTAACACTT  61 298
     SMa1960 1115416 .. 1115452 + -12.9  -2.62184   GATTACCGCCTGAAT    GTCTGCCCGCCGATCCC ACT GTGATCGGTGCGCAGCC    TGATGTGGCGGCGCG  67 142
     SMa1963 1118027 .. 1118050 +  -8.1  -5.28176   GCGAAAATCTTTGCT          GGGC-TGGCG AGCAA CGCCGCGCCC          TTTTTTGTCGCTCCG 100 497
     SMa1967 1119874 .. 1119885 +  -2.2  -3.60627   CGATTGGGAAGGCAC                TGCT CTGA GGCA                 TTTCGCGTCGGGTGA  47 18
     SMa1968 1120803 .. 1120814 +  -3.6   -3.5764   GATCATCAGCCATCC                CTGC CCGT GCGG                 TTTGGGAATGGCCTT  51 60
     SMa1969 1121720 .. 1121738 +    -3  -2.70932   ACGCCGCTCCCGGAA             CGGTGACG ATG CTTCACCA             TCATTCACACCGCCA  41 61
     SMa1971 NONE
     SMa1973 NONE
     SMa1974 1123610 .. 1123623 +  -4.5  -4.72272   TATTCGGCGCGCAAA               CCATG ACAC CGTGG                TTTTTCATAAAGAGA  75 436
     SMa1979 1126159 .. 1126216 +  -8.5  -2.57795   AGATTGGGTGGCATT ATGGCTG-CGAGCGGATG--CGGCCG AAGCCCGGC CGGCCGATCATCCGCCCGTCGGCCAG TGCCTTCCTGATGAA  57 319
     SMa1987 1128759 .. 1128779 +  -4.7  -3.16328   ATGCTGTTGAGTTTG            TGCTTGC ATAATCA GCAAGCG            TCTCTATATTTGCTA  47 329
     SMa1990 1129446 .. 1129458 +  -4.8  -2.56046   TCACCGTACCGCCCA                TCGG CGTGT CCGA                TGAATTGGCGTTTCC  43 67
     SMa2002 NONE
     SMa2004 1137464 .. 1137476 +  -6.3  -3.03771   GTCCACCTGGTCGAG                TTGCA CAA TGCAA                TATTCAACGATATCG  52 409
     SMa2009 NONE
     SMa2011 1139159 .. 1139178 +  -4.2  -3.81626   CTTTCAGATGCTTTC            GCC-GCAGA ATG TCGGCCGGC            TTGTTCGATTTCTTG  56 207
     SMa2019 1143607 .. 1143626 +  -5.7  -2.87132   CCCACGGCGTAGGCG            CCC-CCTG CAGAT CAGGCGGG            TGTGTCCCACCCGCC  48 29
     SMa2023 1145020 .. 1145076 + -10.2  -3.01712   CGGCGAAAAAGCAAT GATCGACTTC-GCGTCATCGGGAAGGT CGAG ACCCTCCCGATGACGCTGAAACAAATC TGTTAAACAGACCGC  64 24
     SMa2025 1146857 .. 1146885 + -14.5  -3.29511   CTCGTTTGTGAGGAG        CTTGGCGTCCTGC TGC GCGGGTCGCCGAG        TTCTCCGCAACTGCG  86 42
     SMa2029 NONE
     SMa2031 NONE
     SMa2032 1149768 .. 1149779 +  -5.8  -4.41616   CTACGGTCCAAATCG                GCCA TGGC TGGC                 TTTATTTCGCACAAT  72 411
     SMa2033 1151168 .. 1151178 +  -2.4  -4.71426   TCGCTGTGGAACGAT                 CGTG CGT CCCG                 TTTTGTTGATGAGCA  66 481
     SMa2043 NONE
     SMa2045 1157178 .. 1157197 +  -2.2  -4.07568   ACCCGCATCGGTTCC            GGTCG-ATA CAT TATGCGATC            TTTTCAGCCCAGAAG  56 117
     SMa2047 NONE
     SMa2049 1159596 .. 1159606 +  -2.4    -3.889   CTTCATCACCATCAC                 GCCC GAA GGCC                 TTTGATCTAATTAGA  53 10
     SMa2051 NONE
     SMa2053 NONE
     SMa2055 1161836 .. 1161868 +  -8.4  -2.77522   CACAAGTCGACCAAC      TGCAGCGCTCCT TTTCAATCC GGGAGCGCTGCC      CTTCTTGGCGCCTCT  58 402
     SMa2061 NONE
     SMa2063 NONE
     SMa2065 1165688 .. 1165703 +    -4  -3.58533   ACTAGGCGCGACCTG              GACGGTC TTC GAC-GTC              TTTAGCGGGTTGTCG  51 221
     SMa2087 NONE
     SMa2089 NONE
     SMa2091 NONE
     SMa2093 NONE
     SMa2095 NONE
     SMa2097 NONE
     SMa2099 1184461 .. 1184474 +  -5.2  -3.06815   ACAATTCATCCGCCG               CCGC TTCACC GCGG                TCTATTGAAGGACCT  49 4
     SMa2101 1186279 .. 1186297 +  -3.7  -3.53444   CATCAGCCTCACCTG             CGCGCGC TCATC GTGCCCG             TTTCGCACCCAATGG  51 505
     SMa2105 1189197 .. 1189213 +    -8  -2.62184   GATTTCTACCTGCCC              GGCATC CACAA GATGCC              TGATCTGCCACAGAG  51 298
     SMa2109 1191193 .. 1191226 +  -4.6  -3.76125   TCGTGCGTCGGCTCG     TGGCAATAATCGTGG AGCAG CCACG-TTAAAGCCA     TTTACCTTCGGCTCA  56 263
     SMa2111 1193319 .. 1193347 +  -6.6  -3.16881   GTTCGCCTGAGCACA        GGCGTCGCCCTT CCCGA AAGCCCGGCGCC        TTCCTACAATGACTA  52 31
     SMa2151 1216098 .. 1216137 + -11.3  -3.06796   CACGGGACTCCGCTC  CGTTCCCCGAGGTGGCC ATAAAA GGCCGCCTGAGGGGGCG   TTCGATAGCGTACAA  69 499
     SMa2157 NONE
     SMa2159 1218551 .. 1218597 +  -8.8  -2.62983   CTAACCAGCCATACG CTCGGC-ATCCTGCCCGCTGGA TACAT TATAGCGGG-AGGCTAGCCGAG TGGTGTACCAATGCA  57 115
     SMa2163 1219558 .. 1219569 +  -5.8  -3.21276   GCGATATCACAGTAG                TCGC GTCG GCGA                 TGTTCTCGAAAACCA  51 94
     SMa2165 1220772 .. 1220803 + -13.1    -4.128   CCGATCTAGTTCAGA      GACCCCGATGC ACCTCCTCCC GCATCGGGGTC       TTTCTATATCAGGAT  93 442
     SMa2167 1222113 .. 1222134 +  -5.8  -3.53444   ACCACCATACTGATC           GCAACGGC CCAACA GCCATTGC            TTAGTTATTCAAAAA  55 191
     SMa2215 NONE
     SMa2217 NONE
     SMa2219 NONE
     SMa2221 NONE
     SMa2223 1245496 .. 1245517 +  -4.3  -4.09556   TCGGGCAGTCAACGC           GGCCCGTGG TGCC TCATGGGCG            TTTGCTTTGAATGTC  60 177
     SMa2225 1247159 .. 1247171 +  -6.9   -2.8805   GCCGGTCCGCGCGTG                GTCGC GAT GCGGC                TCTGTCGCGCCTCGT  50 163
     SMa2231 1250129 .. 1250144 +  -3.2  -4.51765   TACCAGCAGCAACAT              TCGCCT TGAG AGCCGA               TTTGTTTCAGTTGTC  66 455
     SMa2235 1253304 .. 1253314 +  -2.4   -4.4078   TAATCAGACTCTTTC                 GGGG AAA CACC                 TTTTCATTGACAAAC  65 509
     SMa2239 NONE
     SMa2241 1256450 .. 1256460 +  -4.6  -3.04144   CAAGTAATAAAGCGG                 TGCG CCC CGCG                 TATTGCGGATGAGCC  47 154
     SMa2249 1261752 .. 1261777 + -14.1  -2.90813   GGGCGCCATCCGCCA         TCACGG-CCTGC TCG GCAGGACCGTGA         TCGTTTCGGACGATG  82 0
     SMa2251 1262458 .. 1262468 +  -4.6  -3.54424   CGCCGTGCACCGTCA                 CCGT TTT GCGG                 TTTCGGCGGATGACG  53 146
     SMa2253 NONE
     SMa2255 NONE
     SMa2257 1265350 .. 1265363 +  -3.7  -3.29144   AGCGTTGCAGTTCGG               CGGCG TGCT CGGCG                TTCTGGCGGGGATCG  48 208
     SMa2263 NONE
     SMa2265 1267302 .. 1267316 +  -5.6  -2.85999   GGGTGCGGAGCCTCT               CCAGCG TCT CGCTGA               TGTCGTCTACGGTGA  48 226
     SMa2269 1268532 .. 1268553 +  -9.5  -3.17622   GCGCCGTAGAAAATT           GCCGCGACAA TGA TTGT-GCGGC           TATGTTCTGCCCGTA  61 395
     SMa2285 1271958 .. 1271973 +  -5.4  -3.14931   CGCGAGGCTGCGAAG              CT-GGCC GTG GGCCGAG              TTGATGGACCGTGCC  49 177
     SMa2289 NONE
     SMa2291 NONE
       mrcA2 1278144 .. 1278155 +  -3.6  -3.27298   GGAATGTTCCGCAGG                GCGC AGGC GTGC                 TTCCTCATTACAAGC  47 195
     SMa2295 1279568 .. 1279578 +  -3.2  -4.08767   GCCCTTACTGTTTGG                 TGTG ACG CGCA                 TTTTACCGACGTCCC  58 110
     SMa2297 1280834 .. 1280879 +  -3.1  -3.01162   CTCGACGCCTTCAGG CGGGC-GGTGTGCGAGCAAGGC GCG GTCACGCTCGCGGATCAGTTCG GTTATTTGCTGCTCG  43 159
     SMa2305 1286117 .. 1286141 +  -2.8  -3.91084   CCTCAATAGCATCAA         GG-CTGGG-CTG CTA CGGTCCCGGTCC         TTTCATTCCCCATGA  55 47
     SMa2307 NONE
     SMa2309 NONE
     SMa2311 NONE
     SMa2313 1291131 .. 1291142 +  -3.6  -3.14211   TGGTGACCCGGGCGA                GTCG AGCG CGGC                 TTGATCCAAACGAAT  45 10
     SMa2315 NONE
     SMa2317 1292069 .. 1292081 +  -3.3  -3.71991   AAGCTTGGGTCGGAA                GCTGC CAA GAAGC                TTCTTCCGCTTTATG  52 40
       gst14 1293178 .. 1293198 +    -4  -3.54459   GAAATGTTTATCGTG            CCCATG CGACAAGAC CATGGG            TTTGGCAGGAATTGG  51 394
       uvrD2 1295524 .. 1295536 +  -4.1  -3.54307   CGCGCTGACTCCCCG                GGATG CAT TATCC                TTTACACCCGCTATT  51 133
     SMa2323 1296643 .. 1296656 +  -8.1   -3.5944   AGCGCCGCGCCGTCG               CGCGT CACG ACGCG                TTTGACCATGTCGAT  65 502
        rhtX NONE
        rhbA NONE
        rhbB NONE
        rhbC NONE
        rhbD NONE
        rhbE NONE
        rhbF 1314589 .. 1314614 +    -6  -5.25803   CTGCAACGGAAGATC         GGCGGCTCCC TGAACC GGGAGCGCCC          TTTTTTCTGCCAGTT  90 56
        rhtA NONE
     SMa2339 NONE
     SMa2343 1321048 .. 1321072 +  -2.9  -2.77344   TTTTCCGCGTCCGAC          GAAAGGAATAT TCC ATGATCTTTTC          CTTATTGCCAGATCG  41 66
     SMa5012 NONE
     SMa5013 1322367 .. 1322386 +  -4.8  -2.88861   ACAGCCGCGTCGAAC            GGCCCCTC CGGT GCGGCGCC             TATGTAGCCCTGCTG  46 393
     SMa2349 NONE
     SMa2351 NONE
     SMa2353 1326916 .. 1326940 +  -2.1  -3.54935   TCCTCGGCAACCCAA          TTGGAGTGG CGGTCAT CCACATCAA          TTTCGAGCAACTTTA  47 83
     SMa2355 1328183 .. 1328210 +   -12  -4.07568   ACCAGAAACGAAAAA        GCCTGCCGCG GGAGGAGG TGCGGCAGGC         TTTTCCAAAAGAACC  86 57
        cyaO 1330753 .. 1330766 +  -6.7  -3.09933   ATCCGACGAGCCGCA               GGAGA GTTT TCTCC                TTCAGTGCCTTGACC  51 108
     SMa2361 NONE
     SMa2363 NONE
     SMa2365 NONE
     SMa2367 NONE
     SMa2369 NONE
        codA NONE
     SMa5034 1339800 .. 1339819 +  -3.6  -4.83169   GGGATGCATTTAGGC            GGAATC GGAAAGGG GATTCC             TTTTTCTGCGCAAAT  75 44
     SMa2373 NONE
     SMa2375 1340892 .. 1340920 +  -3.1  -3.39449   GCGCGTCTGATAAGA       CGCGCGGCGCTGT AGAGC GCGG-GCCGC-CG       TTGCTGTTCGTCGAG  47 97
     SMa2377 1342240 .. 1342272 + -14.9  -4.11216   GACCATCCAGGGGAA      GGCCAGGACATGG GCTCGAG CCACGTCCTGGCC      TTTTACCGATCAGAC 100 74
     SMa2381 1345474 .. 1345490 +  -5.1   -4.4009   CGCAGTCACCTAGCA              GGCCAAA ACC TTTGCCC              TTTTCTGGAATGAAC  67 28
     SMa2383 1346534 .. 1346557 +    -3  -3.62096   GAGCGCCAACCGACA          CGGGCATGAC CGCA GCCATGGTCG           TTTAACGTGGTGGAA  49 66
     SMa2387 1349073 .. 1349098 +    -9  -3.18681   CGCTGGGCGTGTGAA         GGATCCGCTG GTCTCG CAGCCGATCC          TTCATCGAATTGGCG  63 27
       repA2 NONE
       repB2 1351311 .. 1351329 -    -3  -2.91593   GATCTTGCTACAAAT             CTGAGGAA GGC TTCCACGG             CTTGTTCGTTGGGGG  42 58
       repC2 1349854 .. 1349867 -  -3.1  -3.21099   GGCGCTGATTACGAA               GTGCGG CGA CCG-AC               GAATTTGGAGCACGC  45 159
     SMa2389 1349143 .. 1349169 -   -10  -2.80307   TAAAGTGGCAGCACA         GACGCTGCCAGG AGC CCGGCCAGCGCC         GAGGGTTCCGGGGAA  63 136
     SMa2385 1346415 .. 1346460 -  -5.9  -2.64472   GATCGGCGAAACCTA TCGCCTTGCCGACGCCGC-CGG CGC CCATGCCGCGATGGCAAGCCGT GCAACCACCGGAAAA  46 280
        katB 1342195 .. 1342217 -  -6.2  -3.62775   AGCACCGCGTAAGAA           GCTGCAGCCT GTT AGACTGCCAC           TATCAACGACCATCC  58 90
     SMa2359 1330675 .. 1330695 -  -5.3  -3.89524   ATGCCATCTGAGAAA            CCGGTGTTC AGA GAAACCCGG            TAAGTTCGAGCGTCT  61 12
     SMa2347 1321590 .. 1321600 -  -8.2  -2.70932   CCGCGTTCCCAATGA                 CCGC TGG GCGG                 GGCCAGAACCGAAAT  54 446
     SMa2341 1318924 .. 1318952 - -10.3  -3.14931   CGGATCGTGCAGGAA       CCGAGCGCGGCG CACCAC CGCCA-GCTCGG        CAATCTGCAGCGCTC  64 371
        rhrA 1314541 .. 1314555 -  -9.2  -2.57132   GTCGCCTTCGACAAG               CGCAGC AAC GCCGCG               TAACCGGCTTCAAGG  60 102
     SMa2335 1304172 .. 1304193 -    -3  -4.74801   CAATTCCAGGAAAAA          CGCGCAGCGG TTTT CCG-TGCG-G           AGTTGCGGCAAAATG  73 181
        kdpA NONE
        kdpB NONE
        kdpC NONE
     SMa2327 NONE
     SMa2325 1296204 .. 1296214 -  -4.6   -3.2614   GAGGCTGCACATGAA                 CGCC TCA GACG                 TCCCGTAGATCTGTT  49 201
     SMa2303 1283353 .. 1283373 -  -4.6  -3.63805   ATTTCATATGGCAAA            TCGTGGCA GTGGT CGCCGCGA            GCATTGGAAGACGTG  56 75
     SMa2301 1281895 .. 1281934 -    -4  -4.30719   CCCGGCGACAACAAA  GGCCCA-GCGCCCTGTGCG TTG CGCGCCGCGCGCCTCGTCC  CGGCACCTGCATACC  65 84
     SMa2299 1280724 .. 1280742 -    -8  -2.72511   GGGAGCGGTTGAAAT             GCCGCCAC CGC GCGTCGGC             CGCAAGGGGTCGGGT  54 45
     SMa2293 1274523 .. 1274535 -  -4.7  -2.73875   CGCCCTTTAATATGA                GGGCG CGG CGACC                AGCTTGAAGGCAGAG  44 83
     SMa2287 1271764 .. 1271774 -  -6.8   -3.8512   GACCTATTACAACAA                 TGCG GAA CGCA                 AGCAAGGACGAGCGG  65 189
     SMa2281 NONE
     SMa2279 1269808 .. 1269822 -  -5.6  -4.29391   AACGATAAAAGCAAA               GCCTGC CAC GCAGGT               GGCGAACAAAGACGA  69 114
     SMa2275 NONE
     SMa2273 1268069 .. 1268079 -  -2.4  -3.78004   CGATGACAAGAAAGA                 CGTC GTG GTCG                 TTGATTATGTCGCAA  52 417
     SMa2267 1266800 .. 1266829 -  -6.3  -3.94634   GATCATCGCAAAGAA       GGTTTACACCGCG GCGC CGCGATGCAGCCC        CGCGACATGTTCGAC  65 373
     SMa2259 1265047 .. 1265080 - -12.5  -3.55761   GACCGAGGCTGCAAA     CCGCGGCATC-CCTCT TCC AGAGGCGATGCAGCAG     TCGCTGCACAAATCG  77 119
     SMa2245 1257275 .. 1257314 -  -8.4  -2.58253   ATACAACGGAACGCA  TGTTCTTCGCGCCGACGA AACT CCGTCGGCGCGAACGGCG   ATCTAAGGATTACGC  57 55
     SMa2243 1256254 .. 1256266 -  -6.3  -3.21695   GCACCATCAAGGTAA                CTGAT ACT ATCAG                TCTGAACCCGCAACG  53 98
     SMa2237 1252636 .. 1252654 -    -3  -4.11216   TTGCGACGTTCAAAA             CGGCGACC GAG GATCGCTA             CGCAGGTTGGGGAGC  61 481
     SMa2233 1249657 .. 1249684 - -16.3  -4.08767   GGCAGCGGCCGAAAA        GGCGGGGGCGT CGCTGC ACACCCCCGCC         CATACGCGGAACTGA 100 492
     SMa2229 NONE
     SMa2227 1246998 .. 1247022 -  -5.6  -3.29263   ATATCCCTCGGAGAA          GTCGCGGATC TTGTG GAACCGTGAC          GGACGGAAGGACAGC  51 116
     SMa2213 NONE
       ilvB2 1237267 .. 1237283 -  -3.6  -2.79117   TGACAAATGAAAGAC              TGGCAG AACCG CTGCCT              CGGCATGTGTCCGGT  43 98
     SMa2209 1236155 .. 1236180 -  -9.7  -2.71712   GCGCCTTGCCGAAAG         GCC-CGGCTCAC AAG GTTAGCCGTGGC         GCTCGATCGTGCGTG  61 57
     SMa2207 NONE
     SMa2205 NONE
     SMa2203 1233339 .. 1233352 -  -2.3   -3.9243   GAAGGCTCGAAATAA               GGCTG ACGC CAGGC                CTGTTCCTTGTCAGG  53 36
     SMa2201 NONE
     SMa2199 1231846 .. 1231865 -  -2.7  -3.14132   GCTGTCTCTCAGGAA            TGGCCAC TTTGCT GCGGCCG             GTGAGAGGGCACCGG  41 50
     SMa2197 NONE
     SMa2195 NONE
     SMa2193 1228782 .. 1228815 - -14.7  -3.07443   CCATACCTCACCTAA     GACACGTCGCTAACG ACGT CGTTAATGACGTGTC      TTAGGTCATCAAGGC  83 42
     SMa2191 1228375 .. 1228385 -  -2.4  -3.09202   AGATACACTCGAACA                 CCGG TTC CTGG                 TCCAATCATGCTGCT  41 31
     SMa2189 NONE
     SMa2187 NONE
     SMa2175 1224652 .. 1224686 -  -4.8  -4.55287   TTCAGTGAGATAAAA     TCAACCGACACGCGCC GGC GGAGCGCCCCAGTTGG     GCCGTCGCCAATCAA  70 400
     SMa2171 1222644 .. 1222663 -  -6.4  -3.32516   ACAAAGCAAGGAAGA            GCCGCTTA ATGG TAACCGGC             CGATTGTTACCGCGG  54 328
     SMa2169 1221740 .. 1221762 -  -9.8  -4.14739   TGAGCTAGCGGAAAA           GACAGGACGG GCT CCGTCCAATC           TATCACGCACTCTAC  81 398
     SMa2147 NONE
     SMa5035 1213395 .. 1213429 -    -7  -4.24204   CATGGAGAGGCAAAA     GCAGGAATGCCTGTCG TTG CGAACGACATACCCGC     AGTTCAATCAAGACC  71 260
     SMa2145 1211940 .. 1211982 -    -2  -2.61695   CGGATTTTCAAACAG GCAGATCCCGTTGGCCGCAGC GAGG GCAGCGACC-ATG-G-TCTGC GGAGCATCATGGCGG  38 74
        metF 1211005 .. 1211034 -  -6.4  -3.46659   CAGAGTGAGAACGAA       GGGCTGCGCAACG TTGGT CATCGCAC-GCCC       GCCTGCAACTGCCGG  56 13
       purU3 1210140 .. 1210151 -  -2.2  -2.93853   GCTTCTCAATCAAAT                TGCA AGGC CGCA                 CACGGCTGTCGCCTT  40 39
        sgaA NONE
     SMa2137 1207903 .. 1207915 -  -6.2  -2.84687   TGAAGGATCAGCAGA                CCGC ATCAG GCGG                CGAACGGCCGCTGAA  49 5
       glyA2 1206429 .. 1206440 -  -3.6  -4.09739   CGAAGCCTTTCAAAA                CACC CGGC GGCG                 GTGTTCGCCAAACGT  60 140
     SMa2133 1205601 .. 1205615 -  -3.5  -2.52464   GGCTGGGCGAACCCA               GGCAA TGAAC TCGCC               GGAGGCTCAGCCGTT  39 32
     SMa2131 NONE
     SMa2129 NONE
     SMa2127 NONE
     SMa2125 1200658 .. 1200671 -  -2.3  -4.56597   GCGGTCCCTGAAAAA               GCTCA AGCA TGCGC                TTCACTCCTGACGGT  66 14
     SMa2123 1199458 .. 1199473 -  -3.3  -3.35371   CATACCTTCAATTAA              CGTTT GGGACA AAACG               CAAAGTCGAAGGCCG  47 287
     SMa2121 NONE
     SMa2119 NONE
     SMa2117 NONE
       gst13 NONE
       adhC2 1193376 .. 1193388 -  -6.2  -3.61244   TACCTCAGAAATGAA                GGCG AGGAG CGCC                TTGGAATCGATTATC  58 515
     SMa2107 1188970 .. 1188992 -  -9.8  -2.64616   TTTCGATGGAGAGGA           CGAGCGCG ATAACGA CGCGCCCG           AAAATCTGGCTCATC  60 86
     SMa2103 1185406 .. 1185445 -  -6.4  -3.64915   GTTCATAAAGGAGAA  CGGCATCG-ATCCGGATGG TTT CAATCCGGATGCAGTGCTG  GACGCCGAACGCTTC  59 505
     SMa2085 NONE
     SMa2083 1176088 .. 1176105 -  -3.4  -2.72344   CGCCATCGTCAACGA             TCCTGCG TAAAG CGC-GGA             TTGAGAGCGTCGTTC  41 1
     SMa2081 NONE
     SMa2079 NONE
     SMa2077 1173002 .. 1173036 -   -23  -4.41241   TAAAGGCCGACAAAA     CACAGAGCCCCGGATC AGT GATCCGGGGCTCTTTG     CAACTCGGCTGCCAT 100 71
     SMa2075 1170707 .. 1170734 -  -6.2  -3.19236   ATGAAGAAAAGGAGA        GTGCACTCGGTCG ACC CG-CCGGCTGCAC        TGGCGCCTCCGACGA  54 55
     SMa2073 1169236 .. 1169260 -  -2.1   -3.6682   GGTTAGGCAGCGAAA         GCCAGATGGC GCTTGT GCC-TCTGGG          AGGAGGCGCGGCAGA  51 218
     SMa2071 1168527 .. 1168540 -  -6.7  -3.02144   GCAGGCGCGGGAACA               GGTTG GCAC CAACC                GCAGCTTCACTGCTT  52 40
       cysP1 1166958 .. 1166968 -  -8.2  -3.43919   CGCAAAGGCCAAATA                 CGGC GCC GCCG                 AGCGCTGACTATCGT  61 34
       cysA1 1165756 .. 1165766 -  -6.8  -2.78547   GGATGCTAGGAACTA                 TCCG CAT CGGA                 GGCGAACGAGGTGCT  51 111
     SMa2059 1161836 .. 1161868 -  -7.7  -2.51471   CACAAGTCGACCAAC      TGCAGCGCTCC TTTTCAATCCG GGAGCGCTGCC      CTTCTTGGCGCCTCT  53 56
     SMa2057 1161084 .. 1161113 -  -4.9  -4.21936   GTGAGAACCTGAAAA       CCTATCCGGCG GAAGTGGT CGACGGAGAGG        TGCGCGTGGCTCTGG  64 386
     SMa2041 NONE
     SMa5011 NONE
     SMa2037 NONE
     SMa2034 1151460 .. 1151474 -  -7.8  -3.16564   TGCCCAGCGTACGAA               TCGACC TGC GGCCGA               CCCTATTCCATGCGT  57 194
     SMa2027 1147035 .. 1147050 -  -4.6  -2.57721   TAATCGACCAAGGCA              GCCCCA GGTC CGGAGC               CCAGCGAAAGCTGGG  43 140
     SMa2020 1143621 .. 1143641 -   -14  -2.62184   GCCCCCTGCAGATCA            GGCGGGTG TGTCC CACCCGCC            AATCTGCGAGTAGAT  74 2
     SMa2015 NONE
     SMa2014 1141218 .. 1141229 -  -7.2  -2.74999   GAACGCGCAATAGGA                GGCG CGTG CGCC                 GTGCGACGACAGCAA  51 300
     SMa2012 1138684 .. 1138716 -  -9.7  -3.09671   ACTCGAACTGGAAGA      GCCGGCACGGCTCCC TTG GAGAACAGCGCAGGC      GAGGACAGTCTGTCG  60 355
     SMa2008 1137287 .. 1137322 -  -7.6  -4.25074   CATCAAACTTCAAAA    GAGCGCGCGAAG TCGGAGGAGATG CTTCGCGAGCTC     ATTCGTGCGGATGTC  74 248
     SMa2000 1133919 .. 1133946 -   -17  -2.73364   CCTTTACCCGAATTA        CGGGAGGCAAGC AGGC GCCCGCCTCCCG         GCGCGGTCCGCCTAC  87 37
     SMa1998 NONE
     SMa1996 NONE
     SMa1995 NONE
     SMa1993 1129741 .. 1129772 - -18.8  -4.19746   TGGACGCCAAAAGAA      CACCACTCCGGCAGC GAG GC-GCCGGAGTGGCG      TCGCTCAGAACAACG 100 30
     SMa1985 1125966 .. 1125992 -  -3.7  -3.66803   CCGGAATATCGGAAA        TCGTGGCA-TGG GCGA CCAGCGGCACGA         TGACGAGGCTGAAGG  54 472
     SMa1978 NONE
     SMa1976 1123340 .. 1123372 -  -9.1  -3.13522   ACGGCCTGACCAATA      GGAATGGCAATGTCC GAG AGCCGTCGCCATTCC      TTTCACGCTACAGTC  60 33
     SMa1966 1118185 .. 1118199 -    -7  -3.73968   AAAGGGCCGAGGAAA               CGGTGC CGC GCGCCG               TGCAAAGCGATGACG  63 44
     SMa1965 1117193 .. 1117209 -  -6.5  -3.85698   CTTCCCGCCGACAAA              CCGACGA TGA TCGTCGC              CGAGGGTGTTCTCCC  65 510
     SMa1961 1115176 .. 1115188 -  -3.3  -3.50853   CGCGCCCAACGAGAA                GCGCT CGA AGCTC                GTCGAACGATCGACC  49 202
     SMa1959 1113247 .. 1113288 - -10.7  -2.80074   TTGGCCAGAACACGA GGTCGACTTACCGGCGGCG CAAC CGCGGGCGACAAGCCGGCC  GACTACTACCGGAGC  63 250
     SMa1956 1110915 .. 1110925 -  -6.8  -3.15579   CCAAGGCCCGAGCAA                 GCTC GCA GAGC                 ACGCCATAGTGGCCA  54 425
     SMa1953 1108514 .. 1108565 -    -7  -3.63627   GGGCGATAGTCGAAA CGGTGGCAAGCGCAGGCATG-GCGA AGA TCGCTCCTGCGAGCGCGCGCCGGCG CGAAATCAAGGTCGT  63 213
     SMa1952 1107564 .. 1107575 -  -3.6  -3.58343   GCCACCACCTTCAAA                CGAC TACC GCCG                 CAAAGAAAGCGAAGA  51 137
     SMa1951 1106869 .. 1106879 -  -6.8  -3.21064   TCGAGAATGAAGAGA                 CCGT GCG ACGG                 GCTGAAGCTTCAACA  56 445
     SMa1943 1103407 .. 1103449 -  -8.5  -3.20723   GCCGGATGAACGGAA GCAAGCCCCATCCGT-TCGTG CTG CTCGATACCG-TAGGGCTTGC GCCCTAAAACAATGC  63 288
     SMa1939 1101529 .. 1101543 -  -5.6  -4.16937   AGCAAAGAATAAGAA               TGCGAC GGC GACGCA               TCTCCTCCGTTCCCC  66 113
     SMa1933 1098357 .. 1098385 -  -5.3  -4.07687   ATCGCGCTCTGAAAA       TGGGTGATTCCG GCTTTG CGGAA-CACCCG        GTCGGGCCTACTTTG  64 426
     SMa1929 1097124 .. 1097143 -  -5.7  -3.84406   CTTCCAGCAGAAGAA            TGC-CCGC CTGCT GCGGTGCA            GTGAGCAGTAATCGT  61 494
     SMa1924 1095025 .. 1095039 -  -7.8   -3.6682   GGCCATTCAGCGAAA               GTCACC GCG GGCGAC               ACCCTCGGCCGCTGC  66 2
     SMa1921 1093437 .. 1093449 -  -6.2  -4.39989   AGCAAAGGATGAAAA                CGGC AAGTG GCCG                GTGACACCCTTCGCG  72 115
     SMa1917 1091297 .. 1091323 -    -5  -3.05384   GTCGGCTTCATTCAA         TGGCTCGGCACT CCC AACGCCGGTCCA         CGATGCTTTCCAGCT  47 251
     SMa1916 1089408 .. 1089424 -  -9.3  -2.87564   CTATCGCGCGACAGA              CGCGCTG CAT CGGCGCG              ACGCACTAAACTGTC  62 31
     SMa1907 1085815 .. 1085827 -  -3.3  -3.71917   AGCGGAAACCTTAAA                TTGCG TAG CGCCA                CAGCGACAGCGACAG  52 8
     SMa1885 NONE
     SMa1884 1069915 .. 1069926 -  -3.6  -3.05384   CTCGCGTGCAGGCAA                GGCC GGCA AGCC                 CGCGGCAGACGCTAC  45 37
     SMa1882 1068986 .. 1068998 -  -7.7  -3.26449   GCGGAGACAACTCAA                CTTCG TTG CGAAG                GATGTCGGGAATTAT  58 266
     SMa1878 1067736 .. 1067757 -  -8.6  -2.71791   ACTGCTCCTGTAAAT           CGGGCGGC ATCTCA GCCGCCGG            TCAAAAATCGGCAAG  58 144
     SMa1875 1065528 .. 1065547 -  -6.4  -3.61398   TCGTTCCGTGAACAA            CCG-GAACG AGC CGCTCACGG            CGGAGGAGCGCCGGA  58 172
     SMa1867 1060138 .. 1060152 -  -4.2  -3.71649   CGCGGAAACGGGAAA               GGGTGT GAT ACACTC               TTCTGCCCTGCCGGG  54 84
     SMa1851 1050707 .. 1050719 -  -3.3  -3.34398   GCCTCTCTCTAAAGA                CCGAC GAC GCCAG                GAAGCCCCGAAATGT  47 6
     SMa1850 1049354 .. 1049387 -   -19  -3.36581   TAAATCTCCAAGCAA     GAAGGGCGCGGCACC TTTCC GGT-CCGCGCCCTTC     CTCATAAGCCTGCGC 100 44
     SMa1835 1040902 .. 1040921 -  -9.2  -3.41878   CGGCTGAATGCACAA            CGGTGCCG CACG CCGCACCG             ATATGGATTGCACGC  67 187
     SMa1832 1038625 .. 1038635 -  -2.4  -3.91197   CCATAAAGCAGCAAA                 TCCG GGG CGGC                 CAATTTACGGGCTCG  54 403
     SMa1828 NONE
     SMa1825 1035414 .. 1035435 -  -5.1  -2.66098   AATAGTCCAAAGTTA           GAATGCGGA GCGG CCCTCATTC            GCACACGAAACCGAA  43 48
     SMa1823 1034246 .. 1034260 -  -2.8  -3.57406   TCTCGACCACAAACA               TCGG AATAGGA CCGA               GGCCCTGTGCGGATC  49 170
     SMa1822 NONE
     SMa1821 1032334 .. 1032385 - -10.7  -3.02144   TCATTCCCTTTAACA TTGGTCG-TCGCCACTCCGCCCGC TGGAG GCGGCCGGAGTGGCGCTCGGCTGA GCAACCCCAGTGAAG  66 42
     SMa1820 NONE
     SMa1819 1030046 .. 1030056 -  -2.4  -3.53091   ACGGTCCTTCCTAAA                 CGGC CCA GCAG                 GAGCAGCCGAGTGCG  47 10
     SMa1817 NONE
     SMa1814 NONE
     SMa1811 1026935 .. 1026962 -  -2.6  -3.05022   GGTTCGAGATAGAGA        CTGTCG-CCCGAA GCC TCCGGGGCGACCC        CGATCAGGGGGAAAC  41 47
     SMa1809 NONE
     SMa1808 1025273 .. 1025293 -  -4.5  -3.61894   AACGCCGTCGAAGAA            CTCGATGGG ACG CCCGCCGGG            GCTCGAGGGCGTCAT  53 378
     SMa1803 NONE
     SMa1801 1022605 .. 1022632 -  -2.1  -3.28712   CGGCCTCTCGCAGAA       CGGTGCGTGAACC TCTC GATTCAC--ACCG        CTCCCATCAGGTAAA  44 32
     SMa1799 1021811 .. 1021821 -  -5.4  -3.78953   AGGCCCAGGAGTAAA                 TCAG GGA CTGA                 TCGTTTCCTGTTCCA  58 274
     SMa5032 1016095 .. 1016112 -  -7.7  -3.54741   TACGAGCTCGTCAAA             TGCCACC ACTA AGTGGCA              TATAGAGGCATGGAG  62 287
     SMa1787 1011518 .. 1011530 -  -4.7  -2.87468   CCGCACCAGATCATA                GGCGG CGG CCGCG                AAGGTGAAGGCCCAT  46 8
     SMa1784 1011075 .. 1011089 -  -2.8  -3.38046   CTTTCAGCTGAAATA               TGATTG CAA CATTCA               AGGCGGAAGAGGTCA  47 65
     SMa1783 1010728 .. 1010740 -  -3.3  -4.30576   TCGCGACGACCAAAA                TCGAC ATG GTCGC                TGAGTGACGGCATCC  64 158
     SMa1780 NONE
     SMa1779 1008787 .. 1008802 -  -4.6  -3.55487   GGAGATCAAGGACAA              CATCCG GGAG CGGAGG               CGCATGGTGAGCACG  53 87
     SMa1770 1005799 .. 1005812 -  -8.1  -3.09492   CTGGGAAGGGGAAGA               CGAGC GAGA GCTCG                ACGGGTCGGGGATTT  57 140
     SMa1766 NONE
     SMa1765 1003200 .. 1003226 -  -3.1  -3.77831   CCATCAACATGGAAA        CGCTGGCATC-CA CGT TGCGATAC-AGCG        CGACTAGAAGCTCGA  52 285
     SMa1759  999869 ..  999886 -  -3.3  -2.79823   CGGCTGAAAAGCAAG             CCCCTCT TCCA AGCGGGA              TCAGGCTGGACGTGC  41 26
     SMa1757 NONE
     SMa1755  997772 ..  997799 - -12.8  -3.14344   CATCCGCCCGAGCAA        GAAGGACGT-CCC ATC GGGTACGCCCTTC        ACCGCGGATGTTCTT  76 39
     SMa1754 NONE
     SMa1753 NONE
     SMa1751  994230 ..  994240 -  -3.2  -3.57144   CTTCCCACCTGCAAA                 GGAA GGC TCCC                 GCACCGTTGCTCGCG  51 459
     SMa1749  991299 ..  991319 -  -7.6  -3.74902   AGATTCAGGAAAACA            CGACGTTC CAGCT GAACGTCA            ACAATTTGTTCGACG  65 166
     SMa1746 NONE
     SMa1745  986923 ..  986957 -    -7  -3.21668   ATCACGACAGCAAGA     GTGGACGAGGGAGCTG TCA CAGGTCCCTCACACGC     TGGCGCCGGACGATC  56 7
     SMa1742 NONE
     SMa1741 NONE
     SMa1740  983648 ..  983671 -  -7.4  -3.05384   CTTCTCGGTAGCCAA          GCCTTAAAGG TAGG CCTTCAGGGC           ACCGTTCGGCAGGAC  54 350
     SMa1736  980987 ..  981006 -  -3.5  -3.72893   GAGGGCTTTATGAAA            GCCGC TCGCGCCATG GCGGC             AGAGGTGCCGATCCG  54 403
     SMa1734 NONE
     SMa1732  978333 ..  978381 -  -4.6  -2.87132   CGGCCGGCTGACAGA GCGGCGTCGCCATTTCGCGAATTT GGT AACTTTGC-ATA-GGCGACGCCTC TTTTTCGCTAAACGT  46 33
       betB2  976852 ..  976865 -  -3.7  -4.46212   TCGCGTATGAGAAAA               CGGCC GATT GGCTG                AGGTTCTGGGCCGTC  68 60
        proX  975562 ..  975586 - -18.7  -3.75897   AAGTCGGAAGTGAAA          TGATCTCGGCG GAG CGCCGAGATCA          CCAAAAGCTCGCCTC 100 144
     SMa1726  973556 ..  973571 -    -6  -3.37537   GATTCCAAAAGGCAA              CCGGTC ATAC GGCCGG               CGAGTATGTCCAGCG  52 368
     SMa1724  971946 ..  971984 -   -13  -2.59748   CACCTGGAGAAGCCA   GACGAGACCGGCTCGCCC GAT AGGCAAGCCAGACCCGAC   GACGTCTCTCGTCGA  71 186
       adeC4 NONE
     SMa1717  967230 ..  967258 - -18.1  -3.28684   AAGCACCGATACGAA        CCGGCGGCGCCGC TAC GCGACACCACCGG        ATGAGATCATTGAAC 100 32
       adeC3  965256 ..  965290 -  -6.5  -2.81535   GACCCAAAGAGATCA    TTCGCTGCTACCGCCT GCTT AGCCCGTA-CAGCGAA     CTAGCCGGTCATTCA  49 140
     SMa1706  962432 ..  962461 - -17.9  -3.75153   GTTGGTCAACCGAAA       GAGCAAGCCAGCG AGGA CGCCGGCTTGCCC        CCAGATAGCTGCGTC 100 376
     SMa1704  960497 ..  960511 - -12.8  -3.33815   AGCCGTGGCAATCAA               GCGGCG CTG CGCCGC               AGATGCTTCAACGCG  79 7
     SMa1702  959101 ..  959122 -  -4.5  -4.08216   GCACTCGCCGCAAAA           CTGATCAAT GCAT ATCAATCAG            GGATTCGCGACGACC  61 219
       syrB1  957702 ..  957713 -  -7.2  -3.81926   TACGTGAAAAATGAA                CGCC GATT GGCG                 CCGTTGCATTCCTGC  66 240
     SMa1697  956836 ..  956852 -  -9.4  -2.71011   ATGGCGTCTTAATTA              TCCCCG TCGCT CGGGGA              CCCTCCGCCAGGCTC  61 241
     SMa5033  954688 ..  954706 -  -2.3  -4.11216   GCTCGACCGCGAAAA            GGTGACCG TCAG CGG-CGCC             CGCATGGTACCGCCC  59 78
     SMa1683  946932 ..  946960 - -20.3  -3.01712   GTCCGTCCCGGAACA        CGGCGGCCCGG GCCTGAT CCGGGCCGCCG        CACGCTTAGTTGCCG 100 31
     SMa1682  945818 ..  945844 -    -8  -2.94144   GCTTCATCCAAACTA         CTTTCACCAGAG CTC CTCTCGTGGAAG         GCGCGGGACCGGCGG  56 51
     SMa1680 NONE
     SMa1678  942809 ..  942825 -  -3.7  -3.25823   GCCTTGGTAGACCAA              TATCCCA CTC TAGGACA              GGGACGGGAGGCGGC  47 71
     SMa1677 NONE
     SMa1676  939919 ..  939940 -  -2.9  -3.95071   CAAAGGTGGAAACAA           TCCGGCATGG CCA CC-CGCCTGA           CTTCCGGGACTGAGT  58 99
     SMa1674  938670 ..  938684 -  -5.6  -3.14132   CGGCCTCCGGAGCAA               TCGGCG GCG CGCTGA               GCGATGTGGGCATCA  51 334
     SMa1666  932278 ..  932288 -  -2.4  -3.75581   TGCGATAAAAGAAGA                 GCCC TGG GGCC                 GCCTGTCGAGACCTG  51 263
     SMa1664 NONE
     SMa1662  927791 ..  927809 -  -3.1  -2.89511   GCACAGAACGGAAAC             CACGGAA CGAAC TTCCCTG             CGATCGATCGCCCTC  42 108
     SMa1660  926864 ..  926894 -  -6.1  -3.06915   ATCTATCTGATCGAA      CCGAAGCT-CAACG CGGC CGCCGTAGCATCGG       GACGAGCGTCGGCGA  52 2
     SMa1658 NONE
     SMa1657  925837 ..  925871 -  -5.5  -3.04144   CGCGCACGGTGAAGA    CCCCGGGGC-GGCTAC CGGT GCTGCCTGCCGTGGGG     CACTGTGCGAGAGTT  49 2
     SMa1651 NONE
     SMa1650 NONE
     SMa1649 NONE
     SMa1647  918376 ..  918394 -  -4.4  -3.22475   TCGACTTTTAGAACA             GGCGCGTG TGT CATGCGGC             GGCCTTTCCTTGGTT  49 17
     SMa1646  917210 ..  917233 - -12.4  -4.63218   TCTCGCTCAAGAAAA          TGCCCGGTGT CTGG ACACCGGGCT           AGTTGGCGGGAAGAA 100 159
     SMa1635  909799 ..  909827 -  -2.9  -4.11371   CAATACCGCCGAAAA        CTCCCACCGCCCG CCC CGGTCCGCCGAAG        TAAACTGCGACCCAG  60 379
     SMa1630 NONE
     SMa1629  906486 ..  906514 -    -6  -4.11216   CGGCCATTCTGAAAA       GCTCG-CCGATCA GGAG CGATCCGTCGAGC        TCGCCGGACGCCTGG  67 324
     SMa1625  904784 ..  904817 - -14.7  -3.07443   CCATACCTCACCTAA     GACACGTCGCTAACG ACGT CGTTAATGACGTGTC      TTAGGTCATCAAGGC  83 193
     SMa1623  903961 ..  903989 - -10.1  -4.10925   ATACATCCTCGAAAA        GCACGCCGCCGCC GCC GTCAGCGTCGCGC        CCACGCTGGCGACGA  81 429
     SMa1615 NONE
     SMa1614  899642 ..  899655 -  -2.3  -3.54475   TGGTGCACCACATAA               GCGCA ACTA TGCGG                CGACTCTAATTATGC  47 139
     SMa1613  899334 ..  899347 -  -5.9  -3.82442   GTAAGATAAAATCAA               CCGAC ACGC GCCGG                CGGAGCGCCCCAGTT  61 8
     SMa1612  897970 ..  897987 -  -6.9  -3.17392   CAGGCCGTAACGGAA             GGCGCTC GCCA GATCGCC              CTTGCCCGGAATACG  56 54
     SMa1610 NONE
     SMa1608  897056 ..  897066 -  -6.8  -3.75332   AGTCCTCAAGTCAAA                 GCCA ATT TGGC                 GCAGGACCCCTTGGT  63 306
     SMa1602  893771 ..  893786 -  -4.6  -4.08767   CCGACGTCGCCAAAA              TGGAGC ATCG GCTCCG               CTGATATTGCAGCAA  62 111
     SMa1597  890774 ..  890793 -  -7.2  -3.98083   TAGCTAACGCAGAAA            GCCTCA-CA GTT TGATGAGGC            CGAAATTTTGACTCG  68 159
     SMa1593 NONE
     SMa1592 NONE
       cyaI3  884073 ..  884085 -  -4.8  -4.13767   CGGCCTACTTTAAAA                GGCA TGTCG TGCC                TCCGCTCCGCTCGCA  64 73
     SMa1589  883097 ..  883109 -  -3.3  -3.06183   TCGATCGTGATTGAA                CCTCG GTC CGACG                CATCTCTTTGAGGAA  43 168
       syrB2  879615 ..  879627 -  -6.2  -3.63283   AAAGTGAAAGGACAA                CGCC GGTCG GGCG                CCGCGCCTGATGACC  58 257
     SMa1585 NONE
       cyaF5  876720 ..  876735 -  -2.5   -3.5944   ACCTACACTTTGAAA              GTACG CACTTC CGCAC               GGAACACGGTTACAC  47 59
     SMa1582  875074 ..  875086 -  -3.4  -3.53444   CCACGGCCTCTCAAA                TTGC CGCGC GCAA                CGGCTTTTCCGCCCC  49 161
       cpaA2  872397 ..  872411 -  -2.7  -3.56092   GGATCATGGGTCAAA               CCTCG TCTTG CGCGG               CGGATCGCCACGCGA  47 45
       cpaB2 NONE
       cpaE2 NONE
     SMa1572  869259 ..  869271 -  -9.1  -3.65046   GTCCGATCGCAAGAA                CCGCA ATT TGCGG                TACCTTGAAGTTGCG  69 162
       pilA2  868839 ..  868858 - -13.6  -3.66178   TCGTTGAATGCGAAA            GCGGAAGG CATG CCTTCCGC             TTCGCTTGGCAACCG  88 60
       cpaF2 NONE
     SMa1564 NONE
     SMa1562  865299 ..  865342 - -16.7  -3.87318   AACGAGGACATGAAA GCTGTGGCGCCCACGCGTC GGATTT GACGCGCAGGCGCCAGACC GCCCCCCTCTAGGTG 100 34
       nuoJ2 NONE
       nuoK2 NONE
     SMa1541  850605 ..  850636 -  -8.6  -2.72052   AAATCAATCATAGTA      GTCCTCGCGCCG CATCAGCC CGGCGCGATGGC       CGAGAAACTTGGAAA  58 233
     SMa1538 NONE
       nuoM2 NONE
       nuoN2  845728 ..  845745 -  -8.4  -2.70932   GGCCTTGGCCAACCA             GCGGCT TTTCTC AGCCGC              GATCGGCCCCTTCGG  58 202
       nuoA2 NONE
       nuoB2  844864 ..  844874 -  -4.6  -3.34043   GTCATGATGCTATAA                 CCCG TCC CAGG                 GGCGTCCCGGTAAGT  51 1
       nuoC2 NONE
       nuoD2 NONE
       nuoE2 NONE
       nuoF2 NONE
       nuoG2  838643 ..  838653 -  -6.8  -3.27022   GGGAGTCGAGATCAA                 CAGC AAG GCTG                 CAGCATATACCCCCT  56 61
     SMa1515  835842 ..  835856 -  -4.2  -3.05775   ATCATCTCGCAAAAT               CGCCAA TTG CTGACG               CTGCACTTCCCGGCG  45 119
     SMa1503 NONE
     SMa1501 NONE
     SMa1500 NONE
       gst12  825887 ..  825899 -  -7.7  -3.08133   TATCGACGCACGCAA                TCCAG TCG CTGGA                ACGCCCTCAAGCGGC  57 32
     SMa1491 NONE
     SMa1488 NONE
     SMa1487  819431 ..  819460 - -17.1  -2.60075   TCGCCTGTAACGAAG       CGGCGGCGCCGAC CGAA GCCAACGCCGCCG        AGCAAAGAGCACGGA  85 49
     SMa1485 NONE
     SMa5009  817279 ..  817295 -  -8.7  -3.08966   GGAAATCGCAGGGAA              GCTTCCG AGG CAGAAGC              TCGCCATGATATCGA  57 349
     SMa1478  812217 ..  812227 -  -8.2  -3.29837   TCGGAAACATCAATA                 CCGC AAA GCGG                 ATTTCCTGCGTATCC  59 53
     SMa1476  811194 ..  811221 -  -2.6  -3.38272   CAGCAGGATGGAGAA        GAGTCGGAGC GCGCATTT GCGCCGATTC         CGCAGGATCTATGCC  46 59
     SMa1473 NONE
     SMa1471  809115 ..  809156 - -12.3  -4.18488   ACCGATTCCAATAAA TCAGAGCGGGATGC-AGGCG GGA CACCCGGCCTTCCGCTCTGA TGCGTGCCCCTATCA  90 48
     SMa1467 NONE
     SMa1466 NONE
     SMa1465 NONE
     SMa1462  805480 ..  805494 - -12.8  -3.63744   CGTTCCTCGAAAAGA               CGGCCG GCA CGGCCG               ATCCGGTATATCCGC  84 119
     SMa1461 NONE
     SMa1459  803270 ..  803300 -  -5.5  -3.39908   CCTGTGCAAAATATA      TGTCAGTCCATGCA ATTT CGCA-AGACCGACA       CGACCGCCAATCGAT  53 61
     SMa1456  802848 ..  802859 -  -7.2  -3.93369   TGAACCTCAAGCAAA                GCCC CCGA GGGC                 CATGTGATCGAGATA  66 5
     SMa1455  801884 ..  801910 -  -6.4  -3.62096   GCCGAGTACCTGAAA         CTGCCGCCCATC CGT GACGAGCGGGCG         CTGAAGCACTTCCTC  59 439
     SMa1452 NONE
     SMa1450  799159 ..  799179 -  -3.1  -3.67976   CGGATCAATGTGAAA            CCCCCGCCA CCC CGACACGGG            CGGCCCGTCATCCCG  52 41
     SMa1447  796983 ..  796993 -  -6.8  -3.66772   CGAAAGGGCGAAGAA                 GCCT GGA AGGC                 CGCGCAGGCGGTATC  59 425
     SMa1442  795310 ..  795320 -    -4   -2.7976   CTTAAGACGGGAAAT                 TCAT ATG ATGA                 CTTTTGAGATGAGTC  43 39
     SMa1440  794330 ..  794353 - -15.3  -2.90212   CGACGACGTTAGAGA          CGGGCGCCA TCCTCC TGGCGCCCG           CCCGATGTTTCTTTT  84 40
     SMa1438 NONE
     SMa1437 NONE
     SMa1435 NONE
     SMa1434  789140 ..  789156 -  -5.1  -3.07443   GGAGACTTGAGTCAA              GCGCT CGGGGAC AGCGC              ACCGGAGTATCCGGC  47 83
     SMa1431  788526 ..  788544 -  -4.4  -2.96695   TCGGTGATGAAATCA             CTCTCCGG TTA CCGGGGAC             CACTGTTTCGGCCCA  46 4
     SMa1430  787397 ..  787413 - -13.7  -3.36515   CCTGATGGCGAAAGA              CGCGCTC GAA GAGCGCG              TTCAATTCAACATAG  77 71
     SMa1427  785392 ..  785420 - -13.2  -2.51547   CTCGGATAGGAATAT       CGGGGACGGTCAGC TGT GC-G-CCGTCCCCG       GAAAGAGGGTCAGGA  71 35
     SMa1424 NONE
     SMa1421 NONE
     SMa1418 NONE
     SMa1417 NONE
     SMa1415 NONE
     SMa1414  777481 ..  777505 -  -5.5  -3.05384   CTGCGTCGCAGTCAA          GCGTCGCGTCG GAT CGCGGCCACGC          CCAGGCGCTAGGCTG  49 141
     SMa1413  776919 ..  776929 -  -8.2  -4.15044   GTCCCGCCGAAGAAA                 CCGG ATC CCGG                 AATGTATATCGGGCC  74 214
     SMa1409 NONE
     SMa1408 NONE
       ttuD3  771945 ..  771972 -  -6.2  -3.10975   ACGGACGATCGAACA        GCTGCGCCAGAA CCTT TCCTGGTTCAGC         CACCCGATTCCGGCT  49 218
     SMa1400 NONE
        fabG  768962 ..  768972 -  -3.2  -4.16943   TTGGAGACCTCAAAA                 TCGC GGA ACGA                 GCATGCCGGCATCTG  60 9
     SMa1397 NONE
     SMa1394 NONE
       etfB2  766146 ..  766163 -  -2.6  -3.53012   GCGTTTGTCCGGAAA             CCGGTA TCCACT TTCCGG              ACGCATGAACTTAAA  47 36
       etfA2  764912 ..  764924 -  -5.5  -2.52635   AGCGTCAGCATCAAG                CGCTA TGT CAGCG                AAGGCCTCGGCTTTT  45 229
     SMa1386 NONE
     SMa5031 NONE
     SMa1381  761223 ..  761233 -  -6.8  -4.19506   ATCGTAAGGGTAAAA                 GCGA AGC TCGC                 GGCGGCAACCCTTTC  71 59
     SMa1379  759631 ..  759642 -  -3.6  -3.28791   ATCTCTTCCTCAGAA                GCCC CATG AGGC                 AGCCTGACCTTCGCA  47 74
     SMa1377 NONE
     SMa1375  756576 ..  756587 -  -2.2   -3.1855   CGCGGCAAGAGTTAA                TCCA CCTG CGGA                 CGACGCTATTCGGTT  44 31
     SMa1373 NONE
     SMa1374 NONE
     SMa1371  753637 ..  753672 -  -8.2  -3.84451   GGCCGGAAACCGAAA    GCACGG-GGGCGACCGT CAT ACTGCCTCCCTCCATGC    CTGTTCGCCGGCCTT  68 5
     SMa1370 NONE
     SMa1368 NONE
     SMa1367 NONE
     SMa1365  750593 ..  750605 -  -4.7  -3.47941   GAGCAAGCATTACAA                GCTGG GGT CCGGC                CCGTTCTCGCCCAAG  51 72
     SMa5008  749992 ..  750006 -  -3.4  -4.25104   TCCCTCCGATCAAAA               GCCACG TCG CGCGGG               TACCGACAAAAGCGT  60 257
     SMa1364 NONE
     SMa1363  747554 ..  747604 -  -2.3  -2.73124   CGCCAGCCGGCAAAC GGCGGCGCGAGGGCGAGACTTCCG CAGC CGGCATGCTCGCCATCATTC-GCC CTTTTCGTTCACGCC  39 17
     SMa1362  745827 ..  745850 -  -4.4  -2.67428   CTGACGAACAACGCA          GGCGGGAATC GCAA GTTCCCCGCA           CGACCGTCGCGCTTC  43 374
     SMa1361  745472 ..  745486 -  -7.8  -3.08679   CTTTCGGACGTAATA               GAACGG CGG CCGCTC               AGTCCCACAGGACAG  57 147
     SMa1356 NONE
     SMa1355  741977 ..  741993 -  -9.3  -2.57132   CGGCTGGCTGACAAT              CGAGGCC TTC GGCCGCG              CATTGAAAGACCTCG  56 464
     SMa1353 NONE
     SMa1351 NONE
     SMa1349  738118 ..  738136 -  -3.1  -2.76466   AGAAAATGAAACTCA             TCGGC CTCCTCATT GCCGA             CCGGGGACTACTCCG  41 33
     SMa1347  736985 ..  736999 -  -2.8  -4.62471   TGGAACCCGGAAAAA               GTCG TGCTCTT CGAC               GGCGGAAGCGGGATG  69 170
     SMa1334 NONE
     SMa1332 NONE
     SMa1331 NONE
     SMa1329  726347 ..  726376 - -10.1  -2.79842   AAGACCGAGGAATGA       TCCATGGACTTGA ATCA TCAAGTCCATGAG        GCTTGGATTCTCGGC  63 93
     SMa1328  724129 ..  724139 -  -3.2  -2.72379   CGAATGGTCGAATGA                 CGAC TGG ATCG                 CGCCCTCTCGCTTCG  41 419
     SMa1327 NONE
     SMa1326  722380 ..  722399 -  -4.2  -2.82623   GGTTCGTCAGAACTA            GCGGAC GGGTTCAG GCCCGC             CTCGACACGACGATG  43 16
     SMa1325  721988 ..  722005 -  -9.1  -3.63744   TTGGGCGGGAAAAGA             CG-CGGGC GAA GCCCGTCG             CTCCGTTAGGGGCGG  69 85
     SMa1322 NONE
       virB1 NONE
       virB2 NONE
       virB3 NONE
       virB4 NONE
       virB5  716330 ..  716348 -  -3.8  -3.56092   TGACGATGCTGGAAA             GCAGCG CTTCGTC CGCTAC             CAGTTCTTCGACTGT  51 109
       virB6 NONE
       virB7  714954 ..  714964 -  -3.2  -3.08642   AGACCATCGAGTCAA                 CCCT CGC AAGG                 ACGATAGGATGCGTC  43 11
       virB8 NONE
       virB9 NONE
      virB10 NONE
      virB11  711088 ..  711113 -  -3.3  -4.07568   GCGCTGCCCCGAAAA         TCCTTGCACTGG CTC CCA-TGCAGAGA         GAGTAAGAACATCCA  58 150
     SMa1297  708057 ..  708075 -  -8.1  -3.85698   GGCGGCCCGCACAAA             CCAGGCC CGCCC GACCTGG             CTGGCAACCCTGACT  68 75
       adhA1  706782 ..  706830 -   -16  -4.34402   CCGCTTAGACCAAAA GTGAGACTACCGCCTGTCGACC GGATA GGTCGCGAGGCGGTAGTCTCGT CGACACCGCGTCTGT 100 50
     SMa1288 NONE
     SMa1285  700976 ..  700988 -  -4.7  -3.77196   GCACCACTGACGAAA                CGCTC GCG GGGCG                CCTGTCAATCTGGAA  56 309
        norE  698734 ..  698759 -  -3.8  -3.57017   CAAGCGCAAAGAAGA         GCGGCCAGGC GATAAG GCCGACCCGC          AAGACCCGCGGTCCC  51 234
        norC NONE
        norB NONE
        norQ NONE
        norD  693851 ..  693886 - -23.5  -3.25459   ATCAAGCTGAGAACA    GAAAGGCCCGGCATG TACGCG CATGCCGGGCCTTTC     ATCTCGCGGCCTGCC 100 47
     SMa1264  691268 ..  691291 - -12.4  -3.40597   TCCGGGATCGAAAGA          GGCCGGGATC CTGT GATCCGGGCC           CAATTAGGTTTAAGC  76 229
     SMa1261 NONE
     SMa1259 NONE
     SMa1256 NONE
     SMa1255  687145 ..  687161 -  -2.1  -3.91032   GAAGGATGCGAGAAA              CAGCAAC GAC GTGGCGG              ATCCTGGCAACATAG  53 263
        nirK  683641 ..  683660 -    -2  -3.53012   CTCTGCTCTTGGAAA            GTGCGGCCA TGG CGGCCTC-C            TGACGACATCCCTTC  47 114
        nirV  682242 ..  682254 -  -4.8  -5.12617   CAATGAGGGAAAAAA                GCAG GGGAT CTGC                GGCGGTGACAGAAAG  83 507
        nnrR  681416 ..  681427 -  -5.8   -4.3277   GAGATAGAATAGAAA                GAGC ACCT GCTC                 TTTGATGCTTGTCAA  69 62
        azu1  680846 ..  680884 - -17.5  -4.47328   AATGGCAGCACAAAA  CGGACCCGTCGCAG-ACA GGAT TGCACTGCGCCGGGTCCG   TTATTGATTTTGCGT 100 51
        napE NONE
        napF  679944 ..  679976 -    -9  -2.88999   GCTGGAGATATGATA      GGGCGCGCTCCGAT CAGAC ATGGGCGCGCTCCC      ACTCGACCTCGCGAA  59 6
        napD NONE
        napA NONE
        napB NONE
        napC  675665 ..  675675 -  -2.4  -4.22652   GGACATGATGCAAAA                 CGCC GAG GGGG                 TACACCTGGTGCTCG  59 370
        fixL NONE
        fixJ  672728 ..  672739 -  -7.2   -3.1505   ACGAGCCGCCATTAA                GCCG CTTG CGGC                 AACGCGCCGCATTGC  54 60
       fixT1 NONE
        fixK  671581 ..  671604 - -13.8  -3.10464   CCAGGAAGCCGAAGA          GAGGGCCCGC TTTC GCGGCCCCTC           CGACAACCTCAATTG  79 34
        fixM  670914 ..  670933 -  -3.4  -3.90048   GGTTGGTCAAAAAGA            GGCCGGAC AGCG GTACGGAC             AAAGACGTCACGAAG  55 169
       fixN1 NONE
       fixO1 NONE
       fixQ1 NONE
       fixP1  667295 ..  667311 -  -2.1  -3.27915   TAGAGGAACGAAAAT              CTGACCA GGC CGGCCTG              TGATCGGGAAGCGGC  44 74
        fixG NONE
        fixH NONE
       fixI1 NONE
       fixS1 NONE
     SMa1207  661835 ..  661847 -  -3.3  -3.72051   CGCAAGAAGGTCAAA                GCGGA TTT TCCGA                TCCAGCGCCTGTAGC  52 47
     SMa1201  661240 ..  661258 -  -6.6  -4.15044   TCGCGTGCGAAGAAA             CGCACGAC GCG GTCAGGCG             ATCGGCGGTGGGCCT  69 19
     SMa1200  660478 ..  660494 -  -2.1  -3.15544   CGTCAGCCCTAGGAA              GCGCGCC TCG AGTGCAC              CCTTCCCTCCGCCTC  41 49
     SMa1198  658801 ..  658822 -  -5.8  -3.60792   CGGTTAAGCCCGAAA           CTTGGCTC CGTCCC GCGCCAAG            CGTACTCAGCGCCGG  55 31
     SMa1197  658405 ..  658424 -  -6.4  -4.34263   GGGTAAGAAGAGAAA            CCGAGCGCT ACC AGCGC-CAG            AAGAGCAGAGCCCAT  72 13
     SMa1195  657568 ..  657580 -  -6.2  -2.71791   AGTCGTGCGTCAAAC                GGCC GCCTG GGCC                TGGGTTTCGAACCGC  49 7
        nnrS NONE
     SMa1192  655593 ..  655607 -  -4.9  -3.63991   CAGCATGCTGAAGAA               GGCGC TCCAG ACGCC               GCCGCGGAAGGTCGT  55 441
     SMa1178  644520 ..  644537 -  -2.6  -3.74693   CTTCACCGCAGGAAA             CCGATG AAAAAG CCTCGG              AGGGTCTGGAGTAGT  51 162
     SMa1176  643674 ..  643684 -  -2.4  -3.90588   CACCTTCCAATGAAA                 CCGC AAC GCGC                 TGCATGATACCAATA  53 217
     SMa1174 NONE
     SMa1172 NONE
     SMa1171  641925 ..  641948 -  -8.8  -2.73483   ATTCGATGGCAAGGA          GCTA-GCGCCC GAC GGGCGCGTCGC          AGTAACCGCGGCTGA  54 462
     SMa1162  636509 ..  636522 -  -2.4  -2.92667   GTAAGTTTGAAAGCA               CTTC CGATTT GAAG                AAGAGGCAGCGAGCG  40 84
     SMa1161  636151 ..  636161 -  -4.6  -2.72379   CCAATCCCGCAATCA                 CGCC GGT GACG                 CGAAATCCTCATCGT  44 12
     SMa1160 NONE
     SMa1159  635097 ..  635110 -  -2.3  -2.94299   CAACATCTCAAATGA               CGGAG ATTG CTTCG                CGGGCTAACGCGCGA  40 94
     SMa1158 NONE
     SMa1156  632862 ..  632877 - -10.4  -3.47349   CGTGGAAATTGACAA              GTGGCG GGCT CGCCAC               ACGGCGCGCGGACGA  68 121
     SMa1151  628327 ..  628355 - -18.3  -3.05384   TGCTCTGCCACCCAA        TAAAGGCGCCACT TAC AGCGGCGCCTTTA        TTATTTGCTCTCATT 100 36
     SMa1139 NONE
     SMa1138  619915 ..  619944 -  -5.7  -3.88291   CATCAGGTCGACAAA       GCGTACCGGCTG ATCGAGG CAGCCGGTT-GC       CATTTCGACTTGCAG  62 446
     SMa1131 NONE
       degP4  614913 ..  614923 -  -6.8  -3.06183   TCCACTCCTAGCCAA                 GGCA ACT TGCC                 GGACGTGAACGCCCG  54 48
     SMa1126  613394 ..  613404 -  -8.2  -2.52464   CGTTCGTCGAATCGA                 GCCC TTC GGGC                 AGACCCAGGTGTCGG  53 395
     SMa1113  605546 ..  605559 -  -3.7  -4.62069   GGCGCACCCGAAAAA               CGCCG CACT CCGCG                ATTTCCATCTCTGGC  72 487
     SMa1104  603992 ..  604007 -  -5.4  -3.32844   GCGGCTATTCGAGAA              CAACCA GGAA TGGTCG               GCCGGGCGTCTCAAC  53 256
     SMa1097  599318 ..  599328 -  -4.6  -3.72576   GCCTGCCGGATCAAA                 CGAC TGA GCCG                 GGCCAACCATCCGAT  58 226
     SMa1092  597251 ..  597265 -  -2.8  -3.17075   GGTGCGTGAATCGAA               TGGC CAATGAT GCCA               CGAACGCGTTTGAAG  44 281
     SMa1086  593590 ..  593600 -  -2.4  -3.53811   CTGATCGCCGGGAAA                 CGCC GCA GGTG                 AAAACGAGAAAATTT  47 45
     SMa1084  591061 ..  591085 -  -3.5  -2.71681   CAAGTTCGCCAAGTA          TCCATCACTGA GCG TCAACGGCGGA          CGCCAACCATCGCCA  41 5
     SMa1082  590164 ..  590179 -    -9  -3.05384   CGTCTGGCGAGCGAA              GGGATG GATA CATCCC               GAAGATCCGCGTGGC  60 196
     SMa1076  587837 ..  587848 -  -4.4  -3.41878   GCTGGCAAGGGATAA                TGGA GTGC TCCA                 AGTCGGCTATGAAGA  51 32
     SMa1065  582367 ..  582379 -  -4.1  -3.72775   ATCTAGCAAGAAACA                TGGAA GCC CTCCA                AAGTTGAAATGGTAT  54 65
     SMa1063 NONE
     SMa1062 NONE
     SMa1060  579910 ..  579922 -  -5.5  -3.85698   GGCCGTCGCGAGAAA                GCTCG CGA CAAGC                CGGCAGACCCGTAAC  61 89
     SMa1057 NONE
     SMa1056 NONE
     SMa1053 NONE
     SMa1052 NONE
     SMa1050  575866 ..  575893 -  -2.7  -3.40299   GCATCATACCCACAA        GTGCGAATACA AGTTCA CGCATTCCCAC         CTCCCATGGTTTCAT  46 229
     SMa1032  569313 ..  569340 -  -5.7  -2.78762   ATATTACCAACATTA       CTCCTACCCACTT AGCT AAGTGGG--GGAG        CATGTCCGGGCCTTT  47 52
     SMa1030 NONE
     SMa1029  567963 ..  567990 -  -8.5  -3.29263   ATATCGCCTGTACAA       GCCGCTCG-CCCT TTCC AGGGACGAG-GGC        TTGACCGGGAACCAA  63 116
     SMa1028  567650 ..  567661 -  -2.2  -3.91084   CCATTGCGAAGCAAA                GGAC GGCA ATCC                 GGACGAACCGGGGAA  53 132
     SMa1024  566499 ..  566511 -  -4.8   -3.6215   GTAAGTGATGCCAAA                GCAG GAATA CTGC                TACAAAGGCGCTCGC  53 411
     SMa1021  565757 ..  565778 -    -5  -3.35679   GCTCTCGATCTACAA           GCCGCGCG GATTGA CGCGCTAC            GGCTGGCGCAAACAG  51 83
     SMa1016  563529 ..  563555 -  -3.7  -3.88498   CGGCGATAGAGGAAA        TGACGACGACGC TGAA GCACC-TCGCCA         GCCACTGCCATGGGG  58 143
     SMa1010  559350 ..  559373 - -18.2  -3.55444   GCGGCAGCCGCTAAA          CACGCGCCGT CGCA ACGGCGCGTG           TTATTGGTGAACAAT 100 111
     SMa1008  558073 ..  558094 -  -3.6  -3.88787   TGACACTTCGACAAA           GTGCCCGC TCTCTC GCCGACAC            TGTAAATGTCGGCCC  56 468
     SMa1004  555932 ..  555955 -  -2.3  -4.10007   ACAATCGGCCGAAAA          TCGCCAGAT TGCACC AGCTGGCGC           GGAAGAGTAGTTGCC  57 469
     SMa0995  550925 ..  550935 -  -5.4    -3.794   CTTCAACTCACTAAA                 GTTG CTC CAAC                 TCGCCTTCGATGCGG  61 339
     SMa5007  550015 ..  550033 -    -3  -4.42386   GCCTCAGGTAGAAAA             GCCGCG GTTCCCT CGCGGA             GCTCTCCGGCACGCC  67 336
     SMa0988 NONE
     SMa0985 NONE
     SMa0983  546960 ..  546980 -  -3.2  -3.53811   CCGAGCGGCTCCAAA            CCTGCCAG TACTT CCAGCAAG            TTCTTGCGGAGCACC  49 78
       ntrR2  546232 ..  546255 -  -5.2  -3.24232   GTGGCGTGAAAGATA          GGTTCGCG ATCGCCGG CGCGACCC           CCACCAAGGCGATCT  51 235
     SMa0977 NONE
     SMa0976  543535 ..  543548 -  -5.9  -3.53091   ACCCGGTCGGTCAAA               GGCCA TCTA CGGCC                ACCGACCCGATAAAC  55 305
     SMa0967 NONE
     SMa0964  539446 ..  539459 -  -6.7  -2.78596   CACCCTCTGAGCAGA               TGACC GCTA GGTCA                AGCGGTCTCTGAGCC  49 18
     SMa0953 NONE
     SMa0952 NONE
     SMa0951 NONE
     SMa0950  529722 ..  529750 - -10.2  -2.98282   AGCAACGAGGACATA       CGCGGACGCTGCG GGTT CACTGCG-CCGCG        TCGCCTCCATGCATC  64 57
     SMa0937  520410 ..  520434 -  -5.6  -2.72991   CGAGATCGTCAACCA         GGCGCCGACCG TCCC CGGCC-GCGTC          TACGAGCTAGAGGAC  47 352
        traC NONE
        traD NONE
        traG  512716 ..  512762 -  -4.5  -3.54489   TGAACGCGAAACCAA CG-CGACGAGCCGAAGCGATG CTTTCCC CAA-GCTTCGGTTCATCGTCG GGCTTCCGTTCGTGA  53 351
     SMa0907 NONE
     SMa5005 NONE
     SMa0886  493730 ..  493759 -  -9.9  -3.72968   ACGATGACAGCGAAA       CGCCGAGCAGGCGG ATT CC-CCTTCGCGGCG       GAAAGATTGGTGCGA  72 67
     SMa0882  491995 ..  492026 -  -2.2  -4.79352   CTATGGATAAGAAAA      GATGGGCTCGCAGCC GGT AGCT-CGAACCCCTG      CTAAAAAACTGGCGC  70 522
        nodM NONE
        nolF  488856 ..  488868 -  -4.1  -3.15249   GATACGTGTGAGGAA                CATCC CTC AGATG                CCCTCGATGATCACG  45 19
        nolG NONE
        nodN  485173 ..  485187 -  -8.5   -3.1355   GCCAGCGATACTCAA               CCGGC TTTTG GCCGG               TCCTTGGGATTGAAC  60 7
        nodA  480948 ..  480963 -  -4.6  -2.54896   CGTGTATGTAATCGA              GGTGCT TCAT AGCTCC               GATCCGTTCCGTTCA  43 16
        nodB NONE
        nodC NONE
        nodI NONE
        nodJ  476952 ..  476962 -  -2.4  -3.64487   GCAGATGGCGAAGAA                 CTCG TCG CGCG                 CGTAAAGGCGAATCT  51 205
        nodH  468213 ..  468223 -  -3.2   -3.1505   ATCAGTCGTTAGCAA                 GCTC AAA GAAC                 CTCGCGTAAGGTCCA  43 1
     SMa0850  467229 ..  467241 -  -6.9  -3.14132   TGCTGGTTGTACCAA                GCCGC GTG GCGAC                CCGTGTCGCCGCCAT  53 484
       nodD3  462733 ..  462746 -  -2.3  -4.22375   AGCGAAGAGAAACAA               TGCCG CATC CGTCA                ATGTCTAACGCCCAA  59 30
        fixA NONE
        fixB NONE
        fixC NONE
        fixX  447542 ..  447560 -  -4.5  -2.94912   TTGTGAAGGTACAGA             CAGGGCA CTAAC TCCCCTG             AACGAGTTGCGATGG  46 205
        nifA  445858 ..  445879 -  -5.7  -4.45517   AAAGGACGGAGAAAA           GAGGCGACG CTCG CGACGCCTT            TATCTCACCGGCAGC  72 41
        nifB NONE
        fdxN  443954 ..  443966 -  -3.4  -3.37537   GACCTTAAAATCGAA                GTTC TGTCG GAAC                ATATTGGTAGGAGCT  47 40
        fixU  443488 ..  443519 -    -8   -2.7641   AAAAACTCGGCAAAT      GCAACCGCG-TGAAG GAA CCTGAGCGCGGTCGC      TCGATGATGGGAACC  54 93
     SMa0787  428203 ..  428236 -  -6.5  -4.13014   GTCAGACTCGCAAAA     GGCGTCGGCGGCCGC TATG GTAGCCGCAAACCCC      GGTTAATTGACGCTC  69 28
     SMa0779  424202 ..  424212 -  -4.6  -3.04144   TCCTTAGTGGTAATA                 GCGA GGT CCGC                 GGATGTTGGCGTGAT  47 3
     SMa0776  423269 ..  423281 -  -7.7  -2.63631   GGAACTTTGACATCA                TGAGC CTG GCTCA                ATGCGGTGATATCAA  53 184
     SMa0775  422470 ..  422507 -    -7  -2.75844   CTGCGCAGCCGAAAT   GGCTCCGCAC-CGCAAC TCGCC GCTACGAGTGCGCAACC   CGAAACGGCTGGAGC  51 226
     SMa0750  403142 ..  403155 -  -3.1  -2.78816   CGAGTCTTCATGACA               GC-GAC GCC GTCCGC               ATCAGGGCAGATGCC  41 48
     SMa5003  402500 ..  402514 -  -5.6  -3.91032   GAACTATGCCAGAAA               GCGATC CGA GCTCGC               ACGCGCGACCGGCCT  62 331
       groES  400705 ..  400721 -  -3.6  -2.71712   TCCTGGTTTCGAAAT              TCCGGA ACTGG TCCGGT              TTCAAATTGCGGAAG  43 60
       groEL  398985 ..  399004 -   -15  -5.24129   GTTGCGTACAAAAAA            GGGCGGCT CGAG AGCCGCCC             GTCAGATCCGGATGG 100 64
     SMa0742  398115 ..  398138 -  -3.2  -3.40403   GGGGGCGTAGCACAA          GATTGC-GC ATTGGCA GCTGCAATC          CCATCGAAGGACGGA  47 70
     SMa0739  396893 ..  396907 -    -7  -3.12327   TCCCTACACGCAATA               CCGGTC AAT GCCCGG               GACGGCAAGAGGTCT  54 72
       cspA6  396301 ..  396327 - -10.2  -3.36749   GACGCGGAAGACGAA         TACGCCCTCA TCAATCC TGAGGGCGCA         GAGGACGAGCGGCAG  66 348
       dgoK2  380729 ..  380741 -  -5.5  -3.53444   GGAGCGGGCCCCAAA                GGTAG ATG CCACC                GCGGGCGTCATCCCT  55 250
     SMa0690 NONE
     SMa0689 NONE
     SMa0687  371694 ..  371739 -  -3.2  -3.76402   AGGCGACGGAGCAAA CCGCGCGCATGCATGCTCTAC CGTGT GCAGAGCATGC-CACTCGATG GATCCTCTCGCATTG  52 76
     SMa0684  369880 ..  369907 -  -6.2  -3.44051   TCGGGATGAGGAGAA        GCGCACGCGG TTCTCCGC CCGCATTCGC         TCTAAGTCATCGCTA  56 69
     SMa0683  368858 ..  368875 -  -3.4  -3.25823   CGGCGGCGACACCAA             CGACGCC GACAG GGC-TCG             TGCTCACTCTGCCCA  45 29
     SMa0682 NONE
     SMa0680  364048 ..  364061 -  -2.3  -3.01712   TCCTCCCTCGGAAGA               GGCGA TTAC TCGCG                CACGGCGTAGGTGTA  40 17
        potE NONE
     SMa0677 NONE
     SMa0675 NONE
     SMa0674  359941 ..  359951 -  -2.4  -3.78329   GCCGAGCAATGGAAA                 CGGG CGC CGCG                 GGAATGGGTCGAGGC  52 79
     SMa0665  353581 ..  353591 -  -6.8  -3.12327   TTGCTATATTGAACA                 CGAC TAC GTCG                 CCGCCGAACGGTGGG  53 310
     SMa0663  351680 ..  351699 -  -5.7  -3.64822   ATGCCTTCAGTCAAA            TGGACCCG TCCGC CGGG-CCA            AGCGCTATTGCAATC  58 1
        fixK  350452 ..  350486 -  -7.8  -3.05935   ACAGCTCCGATGGAA     CGGCTGGCCAACCG GGCAAAT CAGCTGACCAGCCC     AGCAAATACGTACCC  54 464
     SMa0656  347966 ..  347981 -  -4.6  -3.80733   TTGATCGGAGAAGAA              CTCCGG CCGC CCCGAG               CGTTACTCAACAGGA  59 292
     SMa5027  346862 ..  346885 - -12.4  -3.22298   GCTACGGAGCAGGAA          GGCGGCGCCGC GCC GCGG-GCCACC          GCTCCCGCCGGAAAC  75 389
     SMa0633 NONE
     SMa0631 NONE
     SMa0630 NONE
     SMa0629  337466 ..  337491 -  -3.9  -2.85668   GACCGGTAGACTAGA         CCGGC-TCGACG ATG CGTCGCTGCCAA         GCGCCCAGCATCTTA  43 266
     SMa0601  319488 ..  319500 -  -6.9  -3.68036   AACTAGCCGAAAACA                GAGCG GCG CGCCC                GTAGCATCAGGGAGG  63 78
     SMa0599  317560 ..  317582 - -14.9  -3.06133   TAATCTGGTACGCAA           GCCGGCGTT GCACA AACGCCGGC           TTTGAACCCTCAAGA  85 521
        nrtA  312160 ..  312185 - -13.2  -3.17075   GGGGGGTTAATCGAA         GGCGGCCGGG AAGGGA CCCGGCTGCC          GATGCGGCATCAGGC  76 35
        nrtB NONE
        nrtC  310239 ..  310249 -  -6.8  -3.05596   GATGGCTCCATCGAA                 GCAC GCG GTGC                 GGCTGGAACAGTCCG  54 201
     SMa0574  305076 ..  305113 -  -6.3  -2.50307   GAAATGCGGACGAAG   CTGCCATTCGAGCGAGGT GTT ACCGTGCT-GAATGGAAG   GCCAATCTGGCATGT  48 40
       cyaF4  301770 ..  301801 -   -10  -2.61264   CGTTTGAGTGACAAC      GGCTGCCGCGACAC TTCT GCGGCACGGCAGGC       CTGTTTGTCAGGCCG  62 101
     SMa0557  295331 ..  295353 - -11.4  -2.52896   TGAGGCGTGAACGGA           TCGTGCAACA ACT TGTTGCACAA           ACACCTAGGGCCATA  65 259
     SMa0548 NONE
     SMa0545  290684 ..  290711 -  -3.5   -3.9461   GCGGCGGAACAATAA       CGTGTCAAGCCGC GCGT GCGGCTC-ACA-G        ATGGCGACGCAGGAC  56 512
     SMa0535 NONE
     SMa5025  286624 ..  286634 -  -4.6  -3.01924   GACGGTCTCGCAACA                 GGCA GCG CGCC                 AGGCGATCGCCGAAC  47 310
     SMa0498  270997 ..  271016 -  -2.7  -4.11216   TGGCCATGCTGAAAA            CGGCCCG GCATCT CATGCCG             TCAAATGCCGGAGGT  59 66
     SMa0495 NONE
     SMa0493  268565 ..  268576 -  -2.2  -3.12668   GATGCCGATATTCAA                GACGG CCT CCG-C                TGAATATGTCTGTTC  41 10
     SMa0492 NONE
     SMa0489 NONE
     SMa0486 NONE
       thrC2 NONE
     SMa0483  263438 ..  263454 -  -5.1  -3.13403   TCGTGCCGATGAACA              CCTCC TGCAGGG GGAGG              GCGCACGCATCCTGA  47 77
     SMa0478  260718 ..  260744 - -15.1  -2.69719   TGGAGAAACATCAAC         TGGCCGTGCGG CTGCC CCGCACGGCCT         CAGAAAAGCCCGCCC  81 45
       cyaI2  248441 ..  248453 -  -5.5  -2.76696   CGCCCCGCTAACAAT                GTCAC ATC GCGAC                GAGTTTGCCTAGGCG  47 14
     SMa0462  246247 ..  246257 -  -2.4  -3.78329   GCCGAGCAATGGAAA                 CGGG CGC CGCG                 GGAATGGGTCGAGGC  52 154
     SMa0448  240000 ..  240031 - -16.6  -2.87132   GCTTCCCGTGAGACA      TCGGTGAAGGCGCC CATC GGCGCCGTCACCAA       TCTTTCGATGCCGTT  88 19
     SMa0445 NONE
     SMa0444  236608 ..  236628 -  -8.1  -2.72661   CATCATCGTCAACGA            GGCTCGGCG TCT CGGCGTGCC            GAACGACAAGCTCGT  54 275
     SMa0436  234119 ..  234131 -  -2.6  -3.53012   GGTTGCGGGGCTAAA                GCCG GTGTT CAGC                CAAGGCGCTATCGAT  47 142
     SMa0431 NONE
     SMa0429  231298 ..  231318 -  -8.9  -2.92513   ACAAGTTCAAGGAGA            GCGACGACG TCT CGCGGTCGC            TGTCGGCCGATGCCC  59 134
     SMa0426 NONE
     SMa0424  229086 ..  229106 -  -3.1  -2.81966   GGAAATCGGAGCATA            TCGACAGCG GCA CGCAGCAGA            GCGACGCGACGAGGC  40 209
     SMa0412  223612 ..  223624 -  -6.9  -3.21395   ATCGCGTCCAGAACA                GGCAG CCG CCGCC                TCGTCGGTAAACTCG  56 262
       hisC3  208958 ..  208980 -  -4.8  -3.86346   CGAGTTCTGGACAAA           CGAGCCCAAA CGC TTCAGGTTCG           ACCCCATCAAATGCC  59 65
     SMa0384  207480 ..  207500 -  -3.3  -3.14132   CCGCTGCTGCATTAA           CGACTCAG TTGTGT CTG-GTCG            AAGAGGAGTAAATGT  43 111
     SMa0372  198791 ..  198821 -  -3.3   -3.1364   GAGCGAACCAGCGAA      GTCGTTTCGGGC GTGGCGCT GCCCGTAAC-AC       AATTGTTTTTCCACG  43 309
     SMa0360 NONE
     SMa0359 NONE
     SMa0357  192767 ..  192784 -  -2.7  -3.65351   GCATGTTCATCCAAA             TTCCG GCGTTGTG CGGAA              ATACTTGGCGAGGCG  51 513
     SMa0352  189806 ..  189816 -  -2.4  -2.75844   GTGGTCATGCGAAAT                 CTCC TGT GGGG                 TGGTTGGATGGATCA  39 43
     SMa0349  189165 ..  189194 -   -15  -3.08327   ATGAAATCGTCAAGA       CGGCTCGCCGGT CTGAAC ACAGGCGAGCCG        CGTAACTTCAGTCTT  85 33
     SMa0346 NONE
     SMa0343  186667 ..  186696 -    -5  -4.10161   GATCACCGGCCAAAA      TCC--GGCATCGGC TCCG GCCGTTGCCCAGGA       ATTGCTGAAGCGCTT  64 232
       wrbA2 NONE
     SMa0339 NONE
     SMa0337 NONE
        fabG  183533 ..  183554 - -10.1  -5.30616   GGAGGCAAAGAAAAA           CCCGCGC TTTCGAGG GCGCGGG            TCCGACTGGAGGGTC 100 47
     SMa0333 NONE
     SMa5017  182918 ..  182937 -   -15  -3.42768   ATGAAAACGCGAGAA            GCCCGGAC CATC GTCCGGGC             TTTTCCTTTGATCGG  87 50
     SMa0310  173876 ..  173916 -  -6.8  -3.98661   GATATCGACCAGAAA GCCGCCGTGGCTGCACGCA ACAC TGCGTTCAAGCA-GGCGGT  GGAAGGCAAATATCT  67 382
     SMa0307  171749 ..  171774 -  -5.5  -3.72968   ATGATGAGATTTAAA         CTCCACTTGAAT GAA ATTCATGTGG-G         ATGGACGGTAGATAC  58 267
     SMa0306  169966 ..  169993 - -15.6  -4.14739   CCATGGAGGGGAAAA        CGGCCCGCAACA ATCA CGTTGCGAGCCG         AGGGTGCGGCAGACG 100 67
     SMa0302 NONE
     SMa0301 NONE
     SMa0300 NONE
     SMa0299 NONE
     SMa0298  162867 ..  162884 -  -5.5  -3.53012   GTTGCTTCTCGCAAA             CACCAAC GGCT GCCGGTG              AAGCGGTCGAACACG  55 182
     SMa0293  162067 ..  162077 -  -6.8  -3.06796   TGCCAGGCCACTGAA                 CGAG GGC CTCG                 ATGACGATAGGCCAT  54 221
     SMa0288 NONE
     SMa0287 NONE
     SMa0286 NONE
     SMa0285  158765 ..  158783 -  -5.2   -3.4678   ATGCGCAGAGGACAA             GACCGGAC CGT GTCCCATC             CTGGCTTCCTTTGGA  53 407
     SMa0280  157458 ..  157473 -  -3.2  -3.60098   ATGGTTTATGGCAAA              CCGCGCC GAT AG-GCGG              AACGCATCGTCCTTC  49 109
     SMa0279  156520 ..  156539 -  -4.9  -3.86897   TGCACCCCTTACAAA            GCTCCAG CGTTTT CAGGAGC             GGTTGGCTCTTCAAT  59 286
     SMa5016  156107 ..  156145 -  -4.6  -3.19389   CAAGCCAGGGACGAA  GCGACGACGCAGGT-GCA GCCCT TGCGACCT-CGGCGTTGC  TGGCGCAAGATGCCG  49 70
     SMa0277  155415 ..  155442 -  -2.7  -3.13403   TGCTCGGCACGAAGA        TCACCCACA CGTAATGGAT TGAGGGTGA         GATCGACGACGGCGT  41 181
     SMa0265 NONE
     SMa0263 NONE
       gabD3 NONE
     SMa0259  145755 ..  145774 -  -7.8   -2.7535   TGGCCCAACACACCA            GCGGCGAA CTTC TTCGGCGC             CCGCCTTTGCCGCCG  54 73
     SMa0257  143291 ..  143319 -  -8.1  -3.05022   CTTTCGACAGATACA        GAGCGCGAAGATA GTT TACCATCGCGGTC        CAGCGTGCCCAATCG  57 179
     SMa0241 NONE
     SMa0237 NONE
     SMa0235  130977 ..  130994 - -14.1  -4.66537   CCGCTGAATACAAAA             GGGCGGC CGGA GCCGCCC              TTCCATCATCGGGGA 100 137
        otsA  129073 ..  129085 -  -9.1  -2.62184   CCGTCGGCGAGAGGA                CCGAG ATC CTCGG                AGAGGACGGCTGGCC  56 240
     SMa0223  122380 ..  122408 -  -8.7  -3.06796   CGCGAGGCGATCGAA        GTCGCGGTGGCGC GCC GGGCCAGCGAGAC        ATTCGATAGCTGGAC  57 469
     SMa0220  120369 ..  120412 - -13.1   -3.1855   GGTCGCAAGACCCAA GTCTCGGCTGGCGGGCTCC GACCAA AGATCACGCCAGCCGAGAT ATTCCTCCTCCTGAC  79 57
     SMa0218 NONE
     SMa0217 NONE
     SMa0216 NONE
        kduI  116502 ..  116517 -  -3.2  -2.90496   CTGCCGTGGAAATCA              CAGGAC CTCA GTCTTG               CAAGGCACCAAACCG  42 181
     SMa0211  116228 ..  116246 -  -2.4  -4.17048   CGGCGGGCAAAACAA            CGAG-GG CCGCAC CCACTCG             TGCGGGAAGCACGGT  59 40
     SMa0210  115339 ..  115359 -  -6.7  -3.62775   ACCAGCCGGCAAGAA            TGCCGGCGC TGG GCGGCGCCA            GTGCGGATCCACTTC  59 518
     SMa0203  111241 ..  111276 - -16.8  -3.62046   TCATCTGCTCAACAA    GACTGCCGCGCGGTCA TCTA CGGCCACGCGGCAGCC     ACCGGGAGATTTCAC  91 37
     SMa0199 NONE
     SMa0198 NONE
     SMa0197 NONE
     SMa0196  106681 ..  106701 -  -4.8  -4.81249   GCTGAAACGGAAAAA           TG-TCAACC GATT GGTTGAGCA            TTACCGGTTCGCATT  76 273
     SMa0193 NONE
     SMa0191  105573 ..  105626 -  -4.4  -2.71144   GATCCGCCTCAATGA CCTCTCCGGAAGCCGCTGGCCGCCC ATCCG GAGCAACCAGCCGC-CATGGAGAGC CCCGCGACCAATCGC  44 198
       cspA7  100366 ..  100398 - -25.1  -2.91383   AGCCTCATGGACAGA      GCGCCTCAGTGTTTC AAT GAAACACTGAGGCGC      TCTGGTCTTGCCGGA 100 132
     SMa0179   97982 ..   97996 -  -4.2  -5.09895   CACGTAGTTAAAAAA               CCAAGA CAG TCCCGG               GGTCCCGAGCAGCTG  81 429
     SMa0175   95609 ..   95625 -  -9.3  -3.07113   CAGCAGGCGACCGAA              GCCGCCG ACA CGGCCGC              TGCCGCAGTTTTCCA  64 189
     SMa0171   93189 ..   93231 -  -6.3  -3.41693   GCGAGCACGAATGAA CCGCCTGACAAACCACTGCAG CGG CTGC-GCGATTTG-CTGGAGG GGCATATGACCCCGG  57 286
     SMa0162   89051 ..   89067 -  -2.1  -3.73224   TGACCTTGTAGCAAA              CCTCTCG AAC CGTGAGC              GGCGCAGCGGCCGCC  51 233
     SMa0157   87248 ..   87267 - -10.6  -3.17075   TGCGCTGGAAGGGAA            TGGCGCGC CGGA GCGCGCCG             TTCTGCCGGTCCGCC  66 41
     SMa0155 NONE
     SMa0151 NONE
     SMa0150   81886 ..   81899 -  -4.5  -4.34737   TCATCAAGGAAGAAA               GTGCCG AAA CGGC-C               TCGGAAACACTGTTG  66 500
     SMa0148   80801 ..   80835 - -31.6  -3.31322   TTGAAGGTGCGACAA     GAGAGCGGGGGCCGGA CAT TCCGGCCCCCGCTCTC     TTGTCTGATCGGACC 100 150
     SMa0146   80038 ..   80052 -  -5.6  -2.57683   ACATTCCGTGACAAT               GCGCAG GCG CTGTGC               CGCGAGTTCGAGCTG  46 268
     SMa0142   77286 ..   77302 -  -9.3  -4.63218   CCGCCCGCAAGAAAA              GCCGGGC ATT GCCCCGC              AACGCTGCCAGTATC  87 145
     SMa0139   76212 ..   76227 -  -2.5  -4.34482   TCTGCGAAAAAAACA              TCACG GCACTA CGCGA               GTTCGGCGTCAAGTT  62 453
     SMa5002 NONE
     SMa0134   70956 ..   70983 - -14.8  -4.08853   CTGAAGATCAAATAA        GCACGCCCCAAG GGGA CATGGGGCGCGC         CACCATTTGAGTCGA 100 108
       groES   67856 ..   67872 -  -2.1  -3.48276   TCGGGCTTGAGATAA              GGGTCGG GAT CCGACGG              ATCAGGCAGCATTGG  47 27
       groEL NONE
     SMa0123 NONE
     SMa0121   65436 ..   65460 -   -15  -2.50994   TTGAATTTGATGAAG          CTGGCCCGCC ATAGG GGCGGGCCAA          TGAGAAACGGCCGAG  81 56
     SMa0112   58751 ..   58763 -  -3.3  -4.11484   TGCAACGCGTGAAAA                GCCGA GGT TCGGT                GCGCGCCCACCGGCT  60 65
     SMa0097   49929 ..   49966 -    -4  -3.02144   CGACCCGGTGGAACA   TGAGCCTGCCACAGCGT TCACC ACGCAGGAGC-GGCTCG   CCGACGGCCACATCG  45 197
     SMa0060 NONE
     SMa0059 NONE
     SMa0058 NONE
     SMa0056   28246 ..   28259 -  -3.7  -4.21194   CGGGACGACGGAAAA               CCAGC CGGG GCGGG                AGGGATCCCGGTCGT  62 61
         cah   25819 ..   25834 -  -4.7  -2.80935   ACCCGACCTACGACA              GCAAG TACATG CTTGC               CCGTGACCGTTGATC  44 39
     SMa0044   25421 ..   25434 -  -3.8  -3.24735   CAGTCAAAGACTCAA               GCGA ACCGCA TCGC                CGATCTTTCGCGCGC  47 8
     SMa0039 NONE
     SMa0034   19461 ..   19473 -  -4.1  -2.90992   AACCCCTTCAAAGCA                GGAAA TCG CTTCC                GGAAAGAGCCGACAG  44 5
     SMa0031   18979 ..   18991 -  -3.3  -3.16881   GATTGACGCGAGTAA                CACGG CCG CCGCA                ATCAGCCCTGGGATC  43 243
        selD   17831 ..   17857 -  -5.9  -3.72324   CATCGCCACCAACAA        TGTTCG-GGAAC GCTT GTTCCACGAGCA         GTCGATATCAGGAAA  58 33
     SMa0026 NONE
     SMa0025 NONE
     SMa0021 NONE
     SMa5000   12227 ..   12258 -  -6.4  -3.98842   GAGAATACTTACAAA      GCGCG-CTACGATCG TTC CGGGCGTCGTCGCGC      TTATGAAAATTGTAG  66 26
