Sthe_2465	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Sthe_2465	PWY-6596	adenosine nucleotides degradation I
Sthe_2465	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Sthe_2500	PWY-5199	factor 420 polyglutamylation
Sthe_2501	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Sthe_2501	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Sthe_2513	PWY-4381	fatty acid biosynthesis initiation I
Sthe_2513	PWY-5743	3-hydroxypropanoate cycle
Sthe_2513	PWY-5744	glyoxylate assimilation
Sthe_2513	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Sthe_2513	PWY-6679	jadomycin biosynthesis
Sthe_2513	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Sthe_2520	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Sthe_2524	PWY-7425	2-chloroacrylate degradation I
Sthe_2525	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Sthe_2525	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Sthe_2542	PWY-2941	L-lysine biosynthesis II
Sthe_2542	PWY-2942	L-lysine biosynthesis III
Sthe_2542	PWY-5097	L-lysine biosynthesis VI
Sthe_2564	PWY-101	photosynthesis light reactions
Sthe_2564	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Sthe_2573	PWY-1341	phenylacetate degradation II (anaerobic)
Sthe_2573	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Sthe_2579	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Sthe_2579	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Sthe_2593	PWY-4981	L-proline biosynthesis II (from arginine)
Sthe_2594	PWY-622	starch biosynthesis
Sthe_2606	PWY-4041	&gamma;-glutamyl cycle
Sthe_2606	PWY-5826	hypoglycin biosynthesis
Sthe_2612	PWY-5198	factor 420 biosynthesis
Sthe_2613	PWY-5198	factor 420 biosynthesis
Sthe_2618	PWY-4981	L-proline biosynthesis II (from arginine)
Sthe_2623	PWY-5941	glycogen degradation II (eukaryotic)
Sthe_2623	PWY-6724	starch degradation II
Sthe_2623	PWY-6737	starch degradation V
Sthe_2623	PWY-7238	sucrose biosynthesis II
Sthe_2624	PWY-381	nitrate reduction II (assimilatory)
Sthe_2624	PWY-5675	nitrate reduction V (assimilatory)
Sthe_2624	PWY-6549	L-glutamine biosynthesis III
Sthe_2624	PWY-6963	ammonia assimilation cycle I
Sthe_2624	PWY-6964	ammonia assimilation cycle II
Sthe_2631	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Sthe_2631	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Sthe_2635	PWY-6854	ethylene biosynthesis III (microbes)
Sthe_2643	PWY-6823	molybdenum cofactor biosynthesis
Sthe_2643	PWY-6891	thiazole biosynthesis II (Bacillus)
Sthe_2643	PWY-6892	thiazole biosynthesis I (E. coli)
Sthe_2643	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Sthe_2651	PWY-4381	fatty acid biosynthesis initiation I
Sthe_2651	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Sthe_2651	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Sthe_2674	PWY-2941	L-lysine biosynthesis II
Sthe_2674	PWY-2942	L-lysine biosynthesis III
Sthe_2674	PWY-5097	L-lysine biosynthesis VI
Sthe_2674	PWY-6559	spermidine biosynthesis II
Sthe_2674	PWY-6562	norspermidine biosynthesis
Sthe_2674	PWY-7153	grixazone biosynthesis
Sthe_2688	PWY-7533	gliotoxin biosynthesis
Sthe_2696	PWY-5392	reductive TCA cycle II
Sthe_2696	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Sthe_2696	PWY-5690	TCA cycle II (plants and fungi)
Sthe_2696	PWY-5913	TCA cycle VI (obligate autotrophs)
Sthe_2696	PWY-6728	methylaspartate cycle
Sthe_2696	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Sthe_2696	PWY-7254	TCA cycle VII (acetate-producers)
Sthe_2696	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Sthe_2714	PWY-2201	folate transformations I
Sthe_2714	PWY-3841	folate transformations II
Sthe_2717	PWY-5101	L-isoleucine biosynthesis II
Sthe_2717	PWY-5103	L-isoleucine biosynthesis III
Sthe_2717	PWY-5104	L-isoleucine biosynthesis IV
Sthe_2717	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Sthe_2741	PWY-6655	xanthan biosynthesis
Sthe_2741	PWY-6658	acetan biosynthesis
Sthe_2776	PWY-5372	carbon tetrachloride degradation II
Sthe_2776	PWY-6780	hydrogen production VI
Sthe_2786	PWY-5298	L-lysine degradation VI
Sthe_2802	PWY-2941	L-lysine biosynthesis II
Sthe_2802	PWY-2942	L-lysine biosynthesis III
Sthe_2802	PWY-5097	L-lysine biosynthesis VI
Sthe_2805	PWY-7431	aromatic biogenic amine degradation (bacteria)
Sthe_2806	PWY-5386	methylglyoxal degradation I
Sthe_2815	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Sthe_2815	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Sthe_2815	PWY-6936	seleno-amino acid biosynthesis
Sthe_2815	PWY-702	L-methionine biosynthesis II
Sthe_2816	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Sthe_2816	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Sthe_2824	PWY-5686	UMP biosynthesis
Sthe_2851	PWY-6167	flavin biosynthesis II (archaea)
Sthe_2859	PWY-3162	L-tryptophan degradation V (side chain pathway)
Sthe_2859	PWY-5057	L-valine degradation II
Sthe_2859	PWY-5076	L-leucine degradation III
Sthe_2859	PWY-5078	L-isoleucine degradation II
Sthe_2859	PWY-5079	L-phenylalanine degradation III
Sthe_2859	PWY-5082	L-methionine degradation III
Sthe_2859	PWY-5480	pyruvate fermentation to ethanol I
Sthe_2859	PWY-5486	pyruvate fermentation to ethanol II
Sthe_2859	PWY-5751	phenylethanol biosynthesis
Sthe_2859	PWY-6028	acetoin degradation
Sthe_2859	PWY-6313	serotonin degradation
Sthe_2859	PWY-6333	acetaldehyde biosynthesis I
Sthe_2859	PWY-6342	noradrenaline and adrenaline degradation
Sthe_2859	PWY-6587	pyruvate fermentation to ethanol III
Sthe_2859	PWY-6802	salidroside biosynthesis
Sthe_2859	PWY-6871	3-methylbutanol biosynthesis
Sthe_2859	PWY-7013	L-1,2-propanediol degradation
Sthe_2859	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Sthe_2859	PWY-7118	chitin degradation to ethanol
Sthe_2859	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Sthe_2859	PWY-7557	dehydrodiconiferyl alcohol degradation
Sthe_2871	PWY-381	nitrate reduction II (assimilatory)
Sthe_2871	PWY-5675	nitrate reduction V (assimilatory)
Sthe_2871	PWY-6549	L-glutamine biosynthesis III
Sthe_2871	PWY-6963	ammonia assimilation cycle I
Sthe_2871	PWY-6964	ammonia assimilation cycle II
Sthe_2899	PWY-5101	L-isoleucine biosynthesis II
Sthe_2899	PWY-5103	L-isoleucine biosynthesis III
Sthe_2899	PWY-5104	L-isoleucine biosynthesis IV
Sthe_2899	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Sthe_2905	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
Sthe_2905	PWY-5739	GDP-D-perosamine biosynthesis
Sthe_2905	PWY-5740	GDP-L-colitose biosynthesis
Sthe_2905	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Sthe_2906	PWY-6728	methylaspartate cycle
Sthe_2906	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Sthe_2906	PWY-7118	chitin degradation to ethanol
Sthe_2906	PWY-7294	xylose degradation IV
Sthe_2906	PWY-7295	L-arabinose degradation IV
Sthe_2923	PWY-1361	benzoyl-CoA degradation I (aerobic)
Sthe_2923	PWY-5109	2-methylbutanoate biosynthesis
Sthe_2923	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Sthe_2923	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Sthe_2923	PWY-5177	glutaryl-CoA degradation
Sthe_2923	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Sthe_2923	PWY-6435	4-hydroxybenzoate biosynthesis V
Sthe_2923	PWY-6583	pyruvate fermentation to butanol I
Sthe_2923	PWY-6863	pyruvate fermentation to hexanol
Sthe_2923	PWY-6883	pyruvate fermentation to butanol II
Sthe_2923	PWY-6944	androstenedione degradation
Sthe_2923	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Sthe_2923	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Sthe_2923	PWY-7007	methyl ketone biosynthesis
Sthe_2923	PWY-7046	4-coumarate degradation (anaerobic)
Sthe_2923	PWY-7094	fatty acid salvage
Sthe_2923	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Sthe_2923	PWY-735	jasmonic acid biosynthesis
Sthe_2923	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Sthe_2924	PWY-723	alkylnitronates degradation
Sthe_2931	PWY-2941	L-lysine biosynthesis II
Sthe_2931	PWY-5097	L-lysine biosynthesis VI
Sthe_2942	PWY-5839	menaquinol-7 biosynthesis
Sthe_2942	PWY-5844	menaquinol-9 biosynthesis
Sthe_2942	PWY-5849	menaquinol-6 biosynthesis
Sthe_2942	PWY-5890	menaquinol-10 biosynthesis
Sthe_2942	PWY-5891	menaquinol-11 biosynthesis
Sthe_2942	PWY-5892	menaquinol-12 biosynthesis
Sthe_2942	PWY-5895	menaquinol-13 biosynthesis
Sthe_2962	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Sthe_2962	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Sthe_2981	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
Sthe_2981	PWY-6174	mevalonate pathway II (archaea)
Sthe_2981	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
Sthe_2981	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
Sthe_2981	PWY-7102	bisabolene biosynthesis
Sthe_2981	PWY-7391	isoprene biosynthesis II (engineered)
Sthe_2981	PWY-7524	mevalonate pathway III (archaea)
Sthe_2981	PWY-7560	methylerythritol phosphate pathway II
Sthe_2981	PWY-922	mevalonate pathway I
Sthe_2982	PWY-5751	phenylethanol biosynthesis
Sthe_3011	PWY-4041	&gamma;-glutamyl cycle
Sthe_3011	PWY-5826	hypoglycin biosynthesis
Sthe_3015	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Sthe_3015	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Sthe_3017	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Sthe_3017	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Sthe_3018	PWY-5839	menaquinol-7 biosynthesis
Sthe_3018	PWY-5851	demethylmenaquinol-9 biosynthesis
Sthe_3018	PWY-5852	demethylmenaquinol-8 biosynthesis I
Sthe_3018	PWY-5853	demethylmenaquinol-6 biosynthesis I
Sthe_3018	PWY-5890	menaquinol-10 biosynthesis
Sthe_3018	PWY-5891	menaquinol-11 biosynthesis
Sthe_3018	PWY-5892	menaquinol-12 biosynthesis
Sthe_3018	PWY-5895	menaquinol-13 biosynthesis
Sthe_3019	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Sthe_3019	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Sthe_3024	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Sthe_3024	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Sthe_3025	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Sthe_3025	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Sthe_3025	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Sthe_3025	PWY-6406	salicylate biosynthesis I
Sthe_3028	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Sthe_3029	PWY-5686	UMP biosynthesis
Sthe_3030	PWY-2161	folate polyglutamylation
Sthe_3066	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Sthe_3066	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Sthe_3087	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Sthe_3107	PWY-6654	phosphopantothenate biosynthesis III
Sthe_3109	PWY-4261	glycerol degradation I
Sthe_3109	PWY-6118	glycerol-3-phosphate shuttle
Sthe_3109	PWY-6952	glycerophosphodiester degradation
Sthe_3121	PWY-4261	glycerol degradation I
Sthe_3149	PWY-6523	nitrite-dependent anaerobic methane oxidation
Sthe_3149	PWY-6748	nitrate reduction VII (denitrification)
Sthe_3149	PWY-7084	nitrifier denitrification
Sthe_3157	PWY-6167	flavin biosynthesis II (archaea)
Sthe_3161	PWY-6599	guanine and guanosine salvage II
Sthe_3161	PWY-6609	adenine and adenosine salvage III
Sthe_3161	PWY-6610	adenine and adenosine salvage IV
Sthe_3161	PWY-6620	guanine and guanosine salvage
Sthe_3187	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Sthe_3187	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Sthe_3192	PWY-3781	aerobic respiration I (cytochrome c)
Sthe_3192	PWY-4521	arsenite oxidation I (respiratory)
Sthe_3192	PWY-6692	Fe(II) oxidation
Sthe_3192	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Sthe_3204	PWY-5686	UMP biosynthesis
Sthe_3213	PWY-6655	xanthan biosynthesis
Sthe_3213	PWY-6658	acetan biosynthesis
Sthe_3227	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Sthe_3227	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Sthe_3227	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Sthe_3231	PWY-3341	L-proline biosynthesis III
Sthe_3231	PWY-4981	L-proline biosynthesis II (from arginine)
Sthe_3231	PWY-6344	L-ornithine degradation II (Stickland reaction)
Sthe_3237	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Sthe_3238	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Sthe_3243	PWY-7425	2-chloroacrylate degradation I
Sthe_3255	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Sthe_3259	PWY-4983	L-citrulline-nitric oxide cycle
Sthe_3259	PWY-4984	urea cycle
Sthe_3259	PWY-5	canavanine biosynthesis
Sthe_3259	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Sthe_3259	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Sthe_3264	PWY-2781	<i>cis</i>-zeatin biosynthesis
Sthe_3266	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Sthe_3293	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Sthe_3328	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Sthe_3328	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Sthe_3424	PWY-6899	base-degraded thiamin salvage
Sthe_3424	PWY-7356	thiamin salvage IV (yeast)
Sthe_3459	PWY-5381	pyridine nucleotide cycling (plants)
Sthe_3465	PWY-3861	mannitol degradation II
Sthe_3465	PWY-3881	mannitol biosynthesis
Sthe_3465	PWY-5659	GDP-mannose biosynthesis
Sthe_3465	PWY-7456	mannan degradation
Sthe_3465	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Sthe_3478	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Sthe_3478	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Sthe_3489	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Sthe_3492	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Sthe_3492	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Sthe_3501	PWY-6853	ethylene biosynthesis II (microbes)
Sthe_3502	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Sthe_3502	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Sthe_3509	PWY-6168	flavin biosynthesis III (fungi)
Sthe_3509	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
