Sphch_2935 PWY-5101 L-isoleucine biosynthesis II Sphch_2935 PWY-5103 L-isoleucine biosynthesis III Sphch_2935 PWY-5104 L-isoleucine biosynthesis IV Sphch_2935 PWY-7111 pyruvate fermentation to isobutanol (engineered) Sphch_2981 PWY-5686 UMP biosynthesis Sphch_3012 PWY-5506 methanol oxidation to formaldehyde IV Sphch_3059 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Sphch_3059 PWY-5530 sorbitol biosynthesis II Sphch_3059 PWY-7165 L-ascorbate biosynthesis VI (engineered pathway) Sphch_3063 PWY-6167 flavin biosynthesis II (archaea) Sphch_3063 PWY-6168 flavin biosynthesis III (fungi) Sphch_3063 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Sphch_3085 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation Sphch_3086 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation Sphch_3091 PWY-7247 β-D-glucuronide and D-glucuronate degradation Sphch_3091 PWY-7248 pectin degradation III Sphch_3093 PWY-6497 D-galactarate degradation II Sphch_3093 PWY-6499 D-glucarate degradation II Sphch_3100 PWY-1081 homogalacturonan degradation Sphch_3100 PWY-7246 pectin degradation II Sphch_3100 PWY-7248 pectin degradation III Sphch_3112 PWY-5022 4-aminobutanoate degradation V Sphch_3112 PWY-6728 methylaspartate cycle Sphch_3112 PWY-7126 ethylene biosynthesis IV Sphch_3122 PWY-5676 acetyl-CoA fermentation to butanoate II Sphch_3122 PWY-5741 ethylmalonyl-CoA pathway Sphch_3122 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Sphch_3177 PWY-5392 reductive TCA cycle II Sphch_3177 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Sphch_3177 PWY-5690 TCA cycle II (plants and fungi) Sphch_3177 PWY-5913 TCA cycle VI (obligate autotrophs) Sphch_3177 PWY-6728 methylaspartate cycle Sphch_3177 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Sphch_3177 PWY-7254 TCA cycle VII (acetate-producers) Sphch_3177 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Sphch_3180 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Sphch_3180 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Sphch_3180 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Sphch_3180 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Sphch_3180 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Sphch_3180 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Sphch_3180 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Sphch_3180 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Sphch_3182 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Sphch_3182 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Sphch_3182 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Sphch_3182 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Sphch_3182 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Sphch_3182 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Sphch_3182 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Sphch_3182 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Sphch_3216 PWY-6134 L-tyrosine biosynthesis IV Sphch_3216 PWY-7158 L-phenylalanine degradation V Sphch_3217 PWY-5028 L-histidine degradation II Sphch_3217 PWY-5030 L-histidine degradation III Sphch_3257 PWY-5386 methylglyoxal degradation I Sphch_3258 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Sphch_3258 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Sphch_3285 PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA Sphch_3288 PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA Sphch_3288 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA Sphch_3302 PWY-3941 β-alanine biosynthesis II Sphch_3302 PWY-5104 L-isoleucine biosynthesis IV Sphch_3302 PWY-5747 2-methylcitrate cycle II Sphch_3306 PWY-7396 butanol and isobutanol biosynthesis (engineered) Sphch_3334 PWY-7165 L-ascorbate biosynthesis VI (engineered pathway) Sphch_3353 PWY-3722 glycine betaine biosynthesis II (Gram-positive bacteria) Sphch_3353 PWY-7494 choline degradation IV Sphch_3374 PWY-5642 2,4-dinitrotoluene degradation Sphch_3374 PWY-6373 acrylate degradation Sphch_3380 PWY-5278 sulfite oxidation III Sphch_3380 PWY-5340 sulfate activation for sulfonation Sphch_3380 PWY-6683 sulfate reduction III (assimilatory) Sphch_3380 PWY-6932 selenate reduction Sphch_3381 PWY-5278 sulfite oxidation III Sphch_3381 PWY-5340 sulfate activation for sulfonation Sphch_3381 PWY-6683 sulfate reduction III (assimilatory) Sphch_3381 PWY-6932 selenate reduction Sphch_3390 PWY-1361 benzoyl-CoA degradation I (aerobic) Sphch_3390 PWY-5109 2-methylbutanoate biosynthesis Sphch_3390 PWY-5136 fatty acid β-oxidation II (peroxisome) Sphch_3390 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Sphch_3390 PWY-5177 glutaryl-CoA degradation Sphch_3390 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Sphch_3390 PWY-6435 4-hydroxybenzoate biosynthesis V Sphch_3390 PWY-6583 pyruvate fermentation to butanol I Sphch_3390 PWY-6863 pyruvate fermentation to hexanol Sphch_3390 PWY-6883 pyruvate fermentation to butanol II Sphch_3390 PWY-6944 androstenedione degradation Sphch_3390 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Sphch_3390 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Sphch_3390 PWY-7007 methyl ketone biosynthesis Sphch_3390 PWY-7046 4-coumarate degradation (anaerobic) Sphch_3390 PWY-7094 fatty acid salvage Sphch_3390 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Sphch_3390 PWY-735 jasmonic acid biosynthesis Sphch_3390 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Sphch_3401 PWY-3781 aerobic respiration I (cytochrome c) Sphch_3401 PWY-4521 arsenite oxidation I (respiratory) Sphch_3401 PWY-6692 Fe(II) oxidation Sphch_3401 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Sphch_3402 PWY-3781 aerobic respiration I (cytochrome c) Sphch_3402 PWY-4521 arsenite oxidation I (respiratory) Sphch_3402 PWY-6692 Fe(II) oxidation Sphch_3402 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Sphch_3422 PWY-3781 aerobic respiration I (cytochrome c) Sphch_3422 PWY-4521 arsenite oxidation I (respiratory) Sphch_3422 PWY-6692 Fe(II) oxidation Sphch_3422 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Sphch_3426 PWY-7052 cyanophycin metabolism Sphch_3428 PWY-7052 cyanophycin metabolism Sphch_3431 PWY-6397 mycolyl-arabinogalactan-peptidoglycan complex biosynthesis Sphch_3431 PWY-7328 superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis Sphch_3443 PWY-723 alkylnitronates degradation Sphch_3447 PWY-6891 thiazole biosynthesis II (Bacillus) Sphch_3447 PWY-6892 thiazole biosynthesis I (E. coli) Sphch_3447 PWY-7560 methylerythritol phosphate pathway II Sphch_3481 PWY-7533 gliotoxin biosynthesis Sphch_3483 PWY-5737 (5R)-carbapenem carboxylate biosynthesis Sphch_3483 PWY-6853 ethylene biosynthesis II (microbes) Sphch_3483 PWY-6922 L-Nδ-acetylornithine biosynthesis Sphch_3485 PWY-1801 formaldehyde oxidation II (glutathione-dependent) Sphch_3486 PWY-1801 formaldehyde oxidation II (glutathione-dependent) Sphch_3486 PWY-3162 L-tryptophan degradation V (side chain pathway) Sphch_3486 PWY-5057 L-valine degradation II Sphch_3486 PWY-5076 L-leucine degradation III Sphch_3486 PWY-5078 L-isoleucine degradation II Sphch_3486 PWY-5079 L-phenylalanine degradation III Sphch_3486 PWY-5082 L-methionine degradation III Sphch_3486 PWY-5480 pyruvate fermentation to ethanol I Sphch_3486 PWY-5486 pyruvate fermentation to ethanol II Sphch_3486 PWY-5751 phenylethanol biosynthesis Sphch_3486 PWY-6028 acetoin degradation Sphch_3486 PWY-6313 serotonin degradation Sphch_3486 PWY-6333 acetaldehyde biosynthesis I Sphch_3486 PWY-6342 noradrenaline and adrenaline degradation Sphch_3486 PWY-6587 pyruvate fermentation to ethanol III Sphch_3486 PWY-6802 salidroside biosynthesis Sphch_3486 PWY-6871 3-methylbutanol biosynthesis Sphch_3486 PWY-7013 L-1,2-propanediol degradation Sphch_3486 PWY-7111 pyruvate fermentation to isobutanol (engineered) Sphch_3486 PWY-7118 chitin degradation to ethanol Sphch_3486 PWY-7396 butanol and isobutanol biosynthesis (engineered) Sphch_3486 PWY-7557 dehydrodiconiferyl alcohol degradation Sphch_3489 PWY-1361 benzoyl-CoA degradation I (aerobic) Sphch_3489 PWY-2361 3-oxoadipate degradation Sphch_3489 PWY-6185 4-methylcatechol degradation (ortho cleavage) Sphch_3493 PWY-5162 2-oxopentenoate degradation Sphch_3494 PWY-5162 2-oxopentenoate degradation Sphch_3494 PWY-5436 L-threonine degradation IV Sphch_3494 PWY-5480 pyruvate fermentation to ethanol I Sphch_3494 PWY-6587 pyruvate fermentation to ethanol III Sphch_3494 PWY-7085 triethylamine degradation Sphch_3494 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation Sphch_3515 PWY-6936 seleno-amino acid biosynthesis Sphch_3529 PWY-6157 autoinducer AI-1 biosynthesis Sphch_3545 PWY-5331 taurine biosynthesis Sphch_3578 PWY-3722 glycine betaine biosynthesis II (Gram-positive bacteria) Sphch_3578 PWY-7494 choline degradation IV Sphch_3621 PWY-3722 glycine betaine biosynthesis II (Gram-positive bacteria) Sphch_3621 PWY-7494 choline degradation IV Sphch_3640 PWY-1361 benzoyl-CoA degradation I (aerobic) Sphch_3640 PWY-5109 2-methylbutanoate biosynthesis Sphch_3640 PWY-5136 fatty acid β-oxidation II (peroxisome) Sphch_3640 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Sphch_3640 PWY-5177 glutaryl-CoA degradation Sphch_3640 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Sphch_3640 PWY-6435 4-hydroxybenzoate biosynthesis V Sphch_3640 PWY-6583 pyruvate fermentation to butanol I Sphch_3640 PWY-6863 pyruvate fermentation to hexanol Sphch_3640 PWY-6883 pyruvate fermentation to butanol II Sphch_3640 PWY-6944 androstenedione degradation Sphch_3640 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Sphch_3640 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Sphch_3640 PWY-7007 methyl ketone biosynthesis Sphch_3640 PWY-7046 4-coumarate degradation (anaerobic) Sphch_3640 PWY-7094 fatty acid salvage Sphch_3640 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Sphch_3640 PWY-735 jasmonic acid biosynthesis Sphch_3640 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Sphch_3642 PWY-1361 benzoyl-CoA degradation I (aerobic) Sphch_3642 PWY-5109 2-methylbutanoate biosynthesis Sphch_3642 PWY-5136 fatty acid β-oxidation II (peroxisome) Sphch_3642 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Sphch_3642 PWY-5177 glutaryl-CoA degradation Sphch_3642 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Sphch_3642 PWY-6435 4-hydroxybenzoate biosynthesis V Sphch_3642 PWY-6583 pyruvate fermentation to butanol I Sphch_3642 PWY-6863 pyruvate fermentation to hexanol Sphch_3642 PWY-6883 pyruvate fermentation to butanol II Sphch_3642 PWY-6944 androstenedione degradation Sphch_3642 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Sphch_3642 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Sphch_3642 PWY-7007 methyl ketone biosynthesis Sphch_3642 PWY-7046 4-coumarate degradation (anaerobic) Sphch_3642 PWY-7094 fatty acid salvage Sphch_3642 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Sphch_3642 PWY-735 jasmonic acid biosynthesis Sphch_3642 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Sphch_3721 PWY-1881 formate oxidation to CO2 Sphch_3721 PWY-5497 purine nucleobases degradation II (anaerobic) Sphch_3721 PWY-6696 oxalate degradation III Sphch_3727 PWY-6672 cis-genanyl-CoA degradation Sphch_3727 PWY-7118 chitin degradation to ethanol Sphch_3740 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Sphch_3740 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Sphch_3740 PWY-6269 adenosylcobalamin salvage from cobinamide II Sphch_3742 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Sphch_3742 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Sphch_3742 PWY-6269 adenosylcobalamin salvage from cobinamide II Sphch_3745 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Sphch_3745 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Sphch_3745 PWY-6269 adenosylcobalamin salvage from cobinamide II Sphch_3756 PWY-7376 cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation) Sphch_3758 PWY-5194 siroheme biosynthesis Sphch_3758 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Sphch_3760 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Sphch_3765 PWY-6683 sulfate reduction III (assimilatory) Sphch_3766 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Sphch_3766 PWY-5523 5,6-dimethylbenzimidazole biosynthesis Sphch_3767 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Sphch_3767 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Sphch_3767 PWY-6268 adenosylcobalamin salvage from cobalamin Sphch_3767 PWY-6269 adenosylcobalamin salvage from cobinamide II Sphch_3779 PWY-5674 nitrate reduction IV (dissimilatory) Sphch_3790 PWY-7533 gliotoxin biosynthesis Sphch_3807 PWY-723 alkylnitronates degradation Sphch_3831 PWY-4381 fatty acid biosynthesis initiation I Sphch_3898 PWY-6216 3-chlorobenzoate degradation II (via protocatechuate) Sphch_3898 PWY-6217 3,4-dichlorobenzoate degradation Sphch_3905 PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde Sphch_3905 PWY-6309 L-tryptophan degradation XI (mammalian, via kynurenine) Sphch_3922 PWY-6215 4-chlorobenzoate degradation Sphch_3951 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation Sphch_3951 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Sphch_3952 PWY-6754 S-methyl-5'-thioadenosine degradation I Sphch_3954 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation Sphch_3954 PWY-5389 3-methylthiopropanoate biosynthesis Sphch_3955 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation Sphch_3964 PWY-4202 arsenate detoxification I (glutaredoxin) Sphch_3964 PWY-4621 arsenate detoxification II (glutaredoxin) Sphch_3970 PWY-4041 γ-glutamyl cycle Sphch_3970 PWY-5826 hypoglycin biosynthesis Sphch_3984 PWY-6784 cellulose and hemicellulose degradation (cellulolosome) Sphch_4015 PWY-5958 acridone alkaloid biosynthesis Sphch_4015 PWY-6543 4-aminobenzoate biosynthesis Sphch_4015 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Sphch_4015 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Sphch_4015 PWY-6722 candicidin biosynthesis Sphch_4021 PWY-2201 folate transformations I Sphch_4021 PWY-5497 purine nucleobases degradation II (anaerobic) Sphch_4022 PWY-1722 formate reduction to 5,10-methylenetetrahydrofolate Sphch_4022 PWY-2201 folate transformations I Sphch_4022 PWY-3841 folate transformations II Sphch_4022 PWY-5030 L-histidine degradation III Sphch_4022 PWY-5497 purine nucleobases degradation II (anaerobic) Sphch_4022 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate Sphch_4029 PWY-4061 glutathione-mediated detoxification I Sphch_4029 PWY-6842 glutathione-mediated detoxification II Sphch_4029 PWY-7112 4-hydroxy-2-nonenal detoxification Sphch_4029 PWY-7533 gliotoxin biosynthesis Sphch_4031 PWY-2201 folate transformations I Sphch_4031 PWY-3841 folate transformations II Sphch_4059 PWY-3722 glycine betaine biosynthesis II (Gram-positive bacteria) Sphch_4059 PWY-7494 choline degradation IV Sphch_4062 PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde Sphch_4062 PWY-6309 L-tryptophan degradation XI (mammalian, via kynurenine)