Swit_0007	PWY-6164	3-dehydroquinate biosynthesis I
Swit_0008	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Swit_0013	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Swit_0025	PWY-6700	queuosine biosynthesis
Swit_0030	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Swit_0030	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Swit_0030	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Swit_0030	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swit_0030	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Swit_0030	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Swit_0030	PWY-7205	CMP phosphorylation
Swit_0030	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Swit_0030	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swit_0030	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Swit_0030	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swit_0030	PWY-7224	purine deoxyribonucleosides salvage
Swit_0030	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Swit_0030	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Swit_0033	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Swit_0033	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Swit_0034	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Swit_0034	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Swit_0034	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Swit_0051	PWY-6823	molybdenum cofactor biosynthesis
Swit_0051	PWY-6891	thiazole biosynthesis II (Bacillus)
Swit_0051	PWY-6892	thiazole biosynthesis I (E. coli)
Swit_0051	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Swit_0052	PWY-6823	molybdenum cofactor biosynthesis
Swit_0052	PWY-6891	thiazole biosynthesis II (Bacillus)
Swit_0052	PWY-6892	thiazole biosynthesis I (E. coli)
Swit_0052	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Swit_0081	PWY-6749	CMP-legionaminate biosynthesis I
Swit_0082	PWY-6910	hydroxymethylpyrimidine salvage
Swit_0082	PWY-7356	thiamin salvage IV (yeast)
Swit_0082	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Swit_0086	PWY-4381	fatty acid biosynthesis initiation I
Swit_0086	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Swit_0086	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Swit_0087	PWY-5367	petroselinate biosynthesis
Swit_0087	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Swit_0087	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Swit_0087	PWY-5989	stearate biosynthesis II (bacteria and plants)
Swit_0087	PWY-5994	palmitate biosynthesis I (animals and fungi)
Swit_0087	PWY-6113	superpathway of mycolate biosynthesis
Swit_0087	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Swit_0087	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Swit_0087	PWY-6951	Swit_0087
Swit_0087	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Swit_0087	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Swit_0087	PWYG-321	mycolate biosynthesis
Swit_0095	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Swit_0095	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Swit_0098	PWY-5988	wound-induced proteolysis I
Swit_0098	PWY-6018	seed germination protein turnover
Swit_0102	PWY-6123	inosine-5'-phosphate biosynthesis I
Swit_0102	PWY-6124	inosine-5'-phosphate biosynthesis II
Swit_0102	PWY-7234	inosine-5'-phosphate biosynthesis III
Swit_0115	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Swit_0115	PWY-6148	tetrahydromethanopterin biosynthesis
Swit_0115	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Swit_0115	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Swit_0133	PWY-6700	queuosine biosynthesis
Swit_0138	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swit_0138	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swit_0142	PWY-3561	choline biosynthesis III
Swit_0142	PWY-7039	phosphatidate metabolism, as a signaling molecule
Swit_0204	PWY-2941	L-lysine biosynthesis II
Swit_0204	PWY-2942	L-lysine biosynthesis III
Swit_0204	PWY-5097	L-lysine biosynthesis VI
Swit_0219	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Swit_0219	PWY-5723	Rubisco shunt
Swit_0226	PWY-5674	nitrate reduction IV (dissimilatory)
Swit_0240	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Swit_0240	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Swit_0240	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Swit_0240	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Swit_0241	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Swit_0241	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Swit_0241	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Swit_0244	PWY-7560	methylerythritol phosphate pathway II
Swit_0269	PWY-5506	methanol oxidation to formaldehyde IV
Swit_0320	PWY-1361	benzoyl-CoA degradation I (aerobic)
Swit_0320	PWY-5109	2-methylbutanoate biosynthesis
Swit_0320	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Swit_0320	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Swit_0320	PWY-5177	glutaryl-CoA degradation
Swit_0320	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swit_0320	PWY-6435	4-hydroxybenzoate biosynthesis V
Swit_0320	PWY-6583	pyruvate fermentation to butanol I
Swit_0320	PWY-6863	pyruvate fermentation to hexanol
Swit_0320	PWY-6883	pyruvate fermentation to butanol II
Swit_0320	PWY-6944	androstenedione degradation
Swit_0320	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Swit_0320	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Swit_0320	PWY-7007	methyl ketone biosynthesis
Swit_0320	PWY-7046	4-coumarate degradation (anaerobic)
Swit_0320	PWY-7094	fatty acid salvage
Swit_0320	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Swit_0320	PWY-735	jasmonic acid biosynthesis
Swit_0320	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Swit_0322	PWY-1361	benzoyl-CoA degradation I (aerobic)
Swit_0322	PWY-5109	2-methylbutanoate biosynthesis
Swit_0322	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Swit_0322	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Swit_0322	PWY-5177	glutaryl-CoA degradation
Swit_0322	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swit_0322	PWY-6435	4-hydroxybenzoate biosynthesis V
Swit_0322	PWY-6583	pyruvate fermentation to butanol I
Swit_0322	PWY-6863	pyruvate fermentation to hexanol
Swit_0322	PWY-6883	pyruvate fermentation to butanol II
Swit_0322	PWY-6944	androstenedione degradation
Swit_0322	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Swit_0322	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Swit_0322	PWY-7007	methyl ketone biosynthesis
Swit_0322	PWY-7046	4-coumarate degradation (anaerobic)
Swit_0322	PWY-7094	fatty acid salvage
Swit_0322	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Swit_0322	PWY-735	jasmonic acid biosynthesis
Swit_0322	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Swit_0339	PWY-2582	brassinosteroid biosynthesis II
Swit_0339	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Swit_0339	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Swit_0339	PWY-6948	sitosterol degradation to androstenedione
Swit_0339	PWY-699	brassinosteroid biosynthesis I
Swit_0339	PWY-7299	progesterone biosynthesis
Swit_0366	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Swit_0366	PWY-7494	choline degradation IV
Swit_0379	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Swit_0379	PWY-7494	choline degradation IV
Swit_0388	PWY-6164	3-dehydroquinate biosynthesis I
Swit_0403	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Swit_0403	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Swit_0405	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Swit_0405	PWY-6596	adenosine nucleotides degradation I
Swit_0405	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Swit_0412	PWY-5988	wound-induced proteolysis I
Swit_0412	PWY-6018	seed germination protein turnover
Swit_0413	PWY-5198	factor 420 biosynthesis
Swit_0414	PWY-5198	factor 420 biosynthesis
Swit_0415	PWY-5199	factor 420 polyglutamylation
Swit_0424	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Swit_0425	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Swit_0425	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Swit_0425	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Swit_0426	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Swit_0426	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Swit_0426	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Swit_0435	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Swit_0435	PWY-5686	UMP biosynthesis
Swit_0435	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Swit_0438	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Swit_0438	PWY-5686	UMP biosynthesis
Swit_0438	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Swit_0446	PWY-1042	glycolysis IV (plant cytosol)
Swit_0446	PWY-1622	formaldehyde assimilation I (serine pathway)
Swit_0446	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Swit_0446	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swit_0446	PWY-5723	Rubisco shunt
Swit_0446	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Swit_0446	PWY-6886	1-butanol autotrophic biosynthesis
Swit_0446	PWY-6901	superpathway of glucose and xylose degradation
Swit_0446	PWY-7003	glycerol degradation to butanol
Swit_0446	PWY-7124	ethylene biosynthesis V (engineered)
Swit_0446	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Swit_0447	PWY-6123	inosine-5'-phosphate biosynthesis I
Swit_0447	PWY-6124	inosine-5'-phosphate biosynthesis II
Swit_0447	PWY-7234	inosine-5'-phosphate biosynthesis III
Swit_0457	PWY-5913	TCA cycle VI (obligate autotrophs)
Swit_0457	PWY-6549	L-glutamine biosynthesis III
Swit_0457	PWY-6728	methylaspartate cycle
Swit_0457	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swit_0457	PWY-7124	ethylene biosynthesis V (engineered)
Swit_0457	PWY-7254	TCA cycle VII (acetate-producers)
Swit_0457	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Swit_0458	PWY-5669	phosphatidylethanolamine biosynthesis I
Swit_0466	PWY-7560	methylerythritol phosphate pathway II
Swit_0470	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Swit_0470	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Swit_0470	PWY-5989	stearate biosynthesis II (bacteria and plants)
Swit_0470	PWY-5994	palmitate biosynthesis I (animals and fungi)
Swit_0470	PWY-6113	superpathway of mycolate biosynthesis
Swit_0470	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Swit_0470	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Swit_0470	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Swit_0470	PWYG-321	mycolate biosynthesis
Swit_0483	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Swit_0483	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Swit_0484	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Swit_0484	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Swit_0484	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swit_0484	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Swit_0484	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Swit_0484	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Swit_0517	PWY-2941	L-lysine biosynthesis II
Swit_0517	PWY-2942	L-lysine biosynthesis III
Swit_0517	PWY-5097	L-lysine biosynthesis VI
Swit_0531	PWY-4702	phytate degradation I
Swit_0539	PWY-6749	CMP-legionaminate biosynthesis I
Swit_0561	PWY-6871	3-methylbutanol biosynthesis
Swit_0568	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Swit_0578	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Swit_0578	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Swit_0578	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Swit_0578	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Swit_0582	PWY-5663	tetrahydrobiopterin biosynthesis I
Swit_0582	PWY-5664	tetrahydrobiopterin biosynthesis II
Swit_0582	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Swit_0582	PWY-6703	preQ<sub>0</sub> biosynthesis
Swit_0582	PWY-6983	tetrahydrobiopterin biosynthesis III
Swit_0582	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Swit_0598	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Swit_0602	PWY-5686	UMP biosynthesis
Swit_0603	PWY-5686	UMP biosynthesis
Swit_0608	PWY-2781	<i>cis</i>-zeatin biosynthesis
Swit_0609	PWY-5101	L-isoleucine biosynthesis II
Swit_0609	PWY-5103	L-isoleucine biosynthesis III
Swit_0609	PWY-5104	L-isoleucine biosynthesis IV
Swit_0609	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Swit_0609	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Swit_0609	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Swit_0609	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Swit_0610	PWY-5101	L-isoleucine biosynthesis II
Swit_0610	PWY-5103	L-isoleucine biosynthesis III
Swit_0610	PWY-5104	L-isoleucine biosynthesis IV
Swit_0610	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Swit_0610	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Swit_0610	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Swit_0610	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Swit_0611	PWY-5101	L-isoleucine biosynthesis II
Swit_0611	PWY-5103	L-isoleucine biosynthesis III
Swit_0611	PWY-5104	L-isoleucine biosynthesis IV
Swit_0611	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Swit_0618	PWY-4381	fatty acid biosynthesis initiation I
Swit_0618	PWY-5743	3-hydroxypropanoate cycle
Swit_0618	PWY-5744	glyoxylate assimilation
Swit_0618	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swit_0618	PWY-6679	jadomycin biosynthesis
Swit_0618	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Swit_0621	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Swit_0623	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Swit_0637	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Swit_0638	PWY-5381	pyridine nucleotide cycling (plants)
Swit_0638	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Swit_0638	PWY-6596	adenosine nucleotides degradation I
Swit_0638	PWY-6606	guanosine nucleotides degradation II
Swit_0638	PWY-6607	guanosine nucleotides degradation I
Swit_0638	PWY-6608	guanosine nucleotides degradation III
Swit_0638	PWY-7185	UTP and CTP dephosphorylation I
Swit_0652	PWY-5642	2,4-dinitrotoluene degradation
Swit_0652	PWY-6373	acrylate degradation
Swit_0679	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Swit_0679	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Swit_0688	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Swit_0688	PWY-7118	chitin degradation to ethanol
Swit_0717	PWY-5198	factor 420 biosynthesis
Swit_0731	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Swit_0734	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swit_0734	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swit_0735	PWY-1361	benzoyl-CoA degradation I (aerobic)
Swit_0735	PWY-5109	2-methylbutanoate biosynthesis
Swit_0735	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Swit_0735	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Swit_0735	PWY-5177	glutaryl-CoA degradation
Swit_0735	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swit_0735	PWY-6435	4-hydroxybenzoate biosynthesis V
Swit_0735	PWY-6583	pyruvate fermentation to butanol I
Swit_0735	PWY-6863	pyruvate fermentation to hexanol
Swit_0735	PWY-6883	pyruvate fermentation to butanol II
Swit_0735	PWY-6944	androstenedione degradation
Swit_0735	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Swit_0735	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Swit_0735	PWY-7007	methyl ketone biosynthesis
Swit_0735	PWY-7046	4-coumarate degradation (anaerobic)
Swit_0735	PWY-7094	fatty acid salvage
Swit_0735	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Swit_0735	PWY-735	jasmonic acid biosynthesis
Swit_0735	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Swit_0736	PWY-5667	CDP-diacylglycerol biosynthesis I
Swit_0736	PWY-5981	CDP-diacylglycerol biosynthesis III
Swit_0746	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Swit_0750	PWY-1361	benzoyl-CoA degradation I (aerobic)
Swit_0750	PWY-5109	2-methylbutanoate biosynthesis
Swit_0750	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Swit_0750	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Swit_0750	PWY-5177	glutaryl-CoA degradation
Swit_0750	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swit_0750	PWY-6435	4-hydroxybenzoate biosynthesis V
Swit_0750	PWY-6583	pyruvate fermentation to butanol I
Swit_0750	PWY-6863	pyruvate fermentation to hexanol
Swit_0750	PWY-6883	pyruvate fermentation to butanol II
Swit_0750	PWY-6944	androstenedione degradation
Swit_0750	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Swit_0750	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Swit_0750	PWY-7007	methyl ketone biosynthesis
Swit_0750	PWY-7046	4-coumarate degradation (anaerobic)
Swit_0750	PWY-7094	fatty acid salvage
Swit_0750	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Swit_0750	PWY-735	jasmonic acid biosynthesis
Swit_0750	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Swit_0752	PWY-1361	benzoyl-CoA degradation I (aerobic)
Swit_0752	PWY-2361	3-oxoadipate degradation
Swit_0752	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Swit_0763	PWY-5913	TCA cycle VI (obligate autotrophs)
Swit_0763	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Swit_0763	PWY-6638	sulfolactate degradation III
Swit_0763	PWY-6642	(<i>R</i>)-cysteate degradation
Swit_0763	PWY-6643	coenzyme M biosynthesis II
Swit_0763	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Swit_0763	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Swit_0763	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Swit_0778	PWY-5057	L-valine degradation II
Swit_0778	PWY-5076	L-leucine degradation III
Swit_0778	PWY-5078	L-isoleucine degradation II
Swit_0778	PWY-5101	L-isoleucine biosynthesis II
Swit_0778	PWY-5103	L-isoleucine biosynthesis III
Swit_0778	PWY-5104	L-isoleucine biosynthesis IV
Swit_0778	PWY-5108	L-isoleucine biosynthesis V
Swit_0779	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Swit_0779	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Swit_0782	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Swit_0807	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Swit_0828	PWY-1361	benzoyl-CoA degradation I (aerobic)
Swit_0828	PWY-5109	2-methylbutanoate biosynthesis
Swit_0828	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Swit_0828	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Swit_0828	PWY-5177	glutaryl-CoA degradation
Swit_0828	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swit_0828	PWY-6435	4-hydroxybenzoate biosynthesis V
Swit_0828	PWY-6583	pyruvate fermentation to butanol I
Swit_0828	PWY-6863	pyruvate fermentation to hexanol
Swit_0828	PWY-6883	pyruvate fermentation to butanol II
Swit_0828	PWY-6944	androstenedione degradation
Swit_0828	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Swit_0828	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Swit_0828	PWY-7007	methyl ketone biosynthesis
Swit_0828	PWY-7046	4-coumarate degradation (anaerobic)
Swit_0828	PWY-7094	fatty acid salvage
Swit_0828	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Swit_0828	PWY-735	jasmonic acid biosynthesis
Swit_0828	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Swit_0831	PWY-5033	nicotinate degradation II
Swit_0831	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swit_0831	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swit_0831	PWY-6993	nicotine degradation II (pyrrolidine pathway)
Swit_0831	PWY-722	nicotinate degradation I
Swit_0852	PWY-6854	ethylene biosynthesis III (microbes)
Swit_0859	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swit_0859	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swit_0887	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Swit_0894	PWY-5386	methylglyoxal degradation I
Swit_0917	PWY-7533	gliotoxin biosynthesis
Swit_0927	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Swit_0940	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Swit_0940	PWY-2201	folate transformations I
Swit_0940	PWY-3841	folate transformations II
Swit_0940	PWY-5030	L-histidine degradation III
Swit_0940	PWY-5497	purine nucleobases degradation II (anaerobic)
Swit_0940	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Swit_0941	PWY-2201	folate transformations I
Swit_0941	PWY-5497	purine nucleobases degradation II (anaerobic)
Swit_0942	PWY-3661	glycine betaine degradation I
Swit_0942	PWY-4722	creatinine degradation II
Swit_0943	PWY-3661	glycine betaine degradation I
Swit_0943	PWY-4722	creatinine degradation II
Swit_0944	PWY-3661	glycine betaine degradation I
Swit_0944	PWY-4722	creatinine degradation II
Swit_0945	PWY-3661	glycine betaine degradation I
Swit_0945	PWY-4722	creatinine degradation II
Swit_0971	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swit_0971	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swit_0976	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Swit_0978	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Swit_0991	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swit_0991	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swit_0992	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swit_0992	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swit_1004	PWY-6167	flavin biosynthesis II (archaea)
Swit_1004	PWY-6168	flavin biosynthesis III (fungi)
Swit_1004	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Swit_1010	PWY-1361	benzoyl-CoA degradation I (aerobic)
Swit_1010	PWY-5109	2-methylbutanoate biosynthesis
Swit_1010	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Swit_1010	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Swit_1010	PWY-5177	glutaryl-CoA degradation
Swit_1010	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swit_1010	PWY-6435	4-hydroxybenzoate biosynthesis V
Swit_1010	PWY-6583	pyruvate fermentation to butanol I
Swit_1010	PWY-6863	pyruvate fermentation to hexanol
Swit_1010	PWY-6883	pyruvate fermentation to butanol II
Swit_1010	PWY-6944	androstenedione degradation
Swit_1010	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Swit_1010	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Swit_1010	PWY-7007	methyl ketone biosynthesis
Swit_1010	PWY-7046	4-coumarate degradation (anaerobic)
Swit_1010	PWY-7094	fatty acid salvage
Swit_1010	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Swit_1010	PWY-735	jasmonic acid biosynthesis
Swit_1010	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Swit_1051	PWY-31	canavanine degradation
Swit_1051	PWY-4984	urea cycle
Swit_1051	PWY-6305	putrescine biosynthesis IV
Swit_1051	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Swit_1070	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Swit_1089	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Swit_1089	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Swit_1114	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Swit_1114	PWY-6853	ethylene biosynthesis II (microbes)
Swit_1114	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Swit_1131	PWY-1622	formaldehyde assimilation I (serine pathway)
Swit_1131	PWY-181	photorespiration
Swit_1131	PWY-2161	folate polyglutamylation
Swit_1131	PWY-2201	folate transformations I
Swit_1131	PWY-3661	glycine betaine degradation I
Swit_1131	PWY-3661-1	glycine betaine degradation II (mammalian)
Swit_1131	PWY-3841	folate transformations II
Swit_1131	PWY-5497	purine nucleobases degradation II (anaerobic)
Swit_1139	PWY-3461	L-tyrosine biosynthesis II
Swit_1139	PWY-3462	L-phenylalanine biosynthesis II
Swit_1139	PWY-6120	L-tyrosine biosynthesis III
Swit_1139	PWY-6627	salinosporamide A biosynthesis
Swit_1149	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swit_1149	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swit_1157	PWY-2201	folate transformations I
Swit_1157	PWY-5497	purine nucleobases degradation II (anaerobic)
Swit_1166	PWY-6891	thiazole biosynthesis II (Bacillus)
Swit_1166	PWY-6892	thiazole biosynthesis I (E. coli)
Swit_1166	PWY-7560	methylerythritol phosphate pathway II
Swit_1177	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Swit_1179	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Swit_1179	PWY-3162	L-tryptophan degradation V (side chain pathway)
Swit_1179	PWY-5057	L-valine degradation II
Swit_1179	PWY-5076	L-leucine degradation III
Swit_1179	PWY-5078	L-isoleucine degradation II
Swit_1179	PWY-5079	L-phenylalanine degradation III
Swit_1179	PWY-5082	L-methionine degradation III
Swit_1179	PWY-5480	pyruvate fermentation to ethanol I
Swit_1179	PWY-5486	pyruvate fermentation to ethanol II
Swit_1179	PWY-5751	phenylethanol biosynthesis
Swit_1179	PWY-6028	acetoin degradation
Swit_1179	PWY-6313	serotonin degradation
Swit_1179	PWY-6333	acetaldehyde biosynthesis I
Swit_1179	PWY-6342	noradrenaline and adrenaline degradation
Swit_1179	PWY-6587	pyruvate fermentation to ethanol III
Swit_1179	PWY-6802	salidroside biosynthesis
Swit_1179	PWY-6871	3-methylbutanol biosynthesis
Swit_1179	PWY-7013	L-1,2-propanediol degradation
Swit_1179	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Swit_1179	PWY-7118	chitin degradation to ethanol
Swit_1179	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Swit_1179	PWY-7557	dehydrodiconiferyl alcohol degradation
Swit_1184	PWY-3781	aerobic respiration I (cytochrome c)
Swit_1184	PWY-4521	arsenite oxidation I (respiratory)
Swit_1184	PWY-6692	Fe(II) oxidation
Swit_1184	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Swit_1203	PWY-43	putrescine biosynthesis II
Swit_1204	PWY-43	putrescine biosynthesis II
Swit_1210	PWY-6936	seleno-amino acid biosynthesis
Swit_1215	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Swit_1215	PWY-6148	tetrahydromethanopterin biosynthesis
Swit_1215	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Swit_1215	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Swit_1243	PWY-723	alkylnitronates degradation
Swit_1255	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Swit_1278	PWY-5344	L-homocysteine biosynthesis
Swit_1278	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Swit_1290	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Swit_1296	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Swit_1296	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Swit_1297	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Swit_1298	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Swit_1299	PWY-5392	reductive TCA cycle II
Swit_1299	PWY-5537	pyruvate fermentation to acetate V
Swit_1299	PWY-5538	pyruvate fermentation to acetate VI
Swit_1299	PWY-5690	TCA cycle II (plants and fungi)
Swit_1299	PWY-5913	TCA cycle VI (obligate autotrophs)
Swit_1299	PWY-6728	methylaspartate cycle
Swit_1299	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swit_1299	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Swit_1300	PWY-1622	formaldehyde assimilation I (serine pathway)
Swit_1300	PWY-5392	reductive TCA cycle II
Swit_1300	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Swit_1300	PWY-5690	TCA cycle II (plants and fungi)
Swit_1300	PWY-5913	TCA cycle VI (obligate autotrophs)
Swit_1300	PWY-6728	methylaspartate cycle
Swit_1300	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swit_1300	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Swit_1300	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Swit_1304	PWY-3781	aerobic respiration I (cytochrome c)
Swit_1304	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Swit_1304	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Swit_1304	PWY-5690	TCA cycle II (plants and fungi)
Swit_1304	PWY-6728	methylaspartate cycle
Swit_1304	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swit_1304	PWY-7254	TCA cycle VII (acetate-producers)
Swit_1304	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Swit_1310	PWY-3781	aerobic respiration I (cytochrome c)
Swit_1310	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Swit_1310	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Swit_1310	PWY-5690	TCA cycle II (plants and fungi)
Swit_1310	PWY-6728	methylaspartate cycle
Swit_1310	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swit_1310	PWY-7254	TCA cycle VII (acetate-producers)
Swit_1310	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Swit_1321	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Swit_1332	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Swit_1365	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Swit_1365	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Swit_1396	PWY-3781	aerobic respiration I (cytochrome c)
Swit_1396	PWY-6692	Fe(II) oxidation
Swit_1396	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
Swit_1396	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Swit_1398	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Swit_1398	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Swit_1401	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Swit_1401	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Swit_1403	PWY-6703	preQ<sub>0</sub> biosynthesis
Swit_1404	PWY-6703	preQ<sub>0</sub> biosynthesis
Swit_1408	PWY-4981	L-proline biosynthesis II (from arginine)
Swit_1408	PWY-4984	urea cycle
Swit_1408	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Swit_1411	PWY-2582	brassinosteroid biosynthesis II
Swit_1411	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Swit_1411	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Swit_1411	PWY-6948	sitosterol degradation to androstenedione
Swit_1411	PWY-699	brassinosteroid biosynthesis I
Swit_1411	PWY-7299	progesterone biosynthesis
Swit_1412	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Swit_1419	PWY-7158	L-phenylalanine degradation V
Swit_1425	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Swit_1433	PWY-4041	&gamma;-glutamyl cycle
Swit_1433	PWY-5826	hypoglycin biosynthesis
Swit_1449	PWY-1341	phenylacetate degradation II (anaerobic)
Swit_1449	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Swit_1461	PWY-6891	thiazole biosynthesis II (Bacillus)
Swit_1461	PWY-6892	thiazole biosynthesis I (E. coli)
Swit_1461	PWY-7560	methylerythritol phosphate pathway II
Swit_1470	PWY-5964	guanylyl molybdenum cofactor biosynthesis
Swit_1473	PWY-1881	formate oxidation to CO<sub>2</sub>
Swit_1473	PWY-5497	purine nucleobases degradation II (anaerobic)
Swit_1473	PWY-6696	oxalate degradation III
Swit_1495	PWY-2941	L-lysine biosynthesis II
Swit_1495	PWY-2942	L-lysine biosynthesis III
Swit_1495	PWY-5097	L-lysine biosynthesis VI
Swit_1504	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Swit_1504	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Swit_1504	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Swit_1504	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Swit_1504	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swit_1504	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swit_1504	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Swit_1504	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Swit_1506	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Swit_1506	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Swit_1506	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Swit_1506	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Swit_1506	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swit_1506	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swit_1506	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Swit_1506	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Swit_1520	PWY-6823	molybdenum cofactor biosynthesis
Swit_1521	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Swit_1521	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Swit_1521	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Swit_1582	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Swit_1582	PWY-7494	choline degradation IV
Swit_1621	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Swit_1623	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Swit_1624	PWY-5101	L-isoleucine biosynthesis II
Swit_1624	PWY-5103	L-isoleucine biosynthesis III
Swit_1624	PWY-5104	L-isoleucine biosynthesis IV
Swit_1624	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Swit_1625	PWY-2723	trehalose degradation V
Swit_1625	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Swit_1625	PWY-5661	GDP-glucose biosynthesis
Swit_1625	PWY-7238	sucrose biosynthesis II
Swit_1625	PWY-7385	1,3-propanediol biosynthesis (engineered)
Swit_1626	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Swit_1626	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Swit_1626	PWY-7242	D-fructuronate degradation
Swit_1626	PWY-7310	D-glucosaminate degradation
Swit_1633	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
Swit_1640	PWY-5162	2-oxopentenoate degradation
Swit_1640	PWY-5436	L-threonine degradation IV
Swit_1640	PWY-5480	pyruvate fermentation to ethanol I
Swit_1640	PWY-6587	pyruvate fermentation to ethanol III
Swit_1640	PWY-7085	triethylamine degradation
Swit_1640	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Swit_1641	PWY-5162	2-oxopentenoate degradation
Swit_1649	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Swit_1654	PWY-5642	2,4-dinitrotoluene degradation
Swit_1654	PWY-6373	acrylate degradation
Swit_1660	PWY-5101	L-isoleucine biosynthesis II
Swit_1660	PWY-5103	L-isoleucine biosynthesis III
Swit_1660	PWY-5104	L-isoleucine biosynthesis IV
Swit_1660	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Swit_1663	PWY-5386	methylglyoxal degradation I
Swit_1665	PWY-2582	brassinosteroid biosynthesis II
Swit_1665	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Swit_1665	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Swit_1665	PWY-6948	sitosterol degradation to androstenedione
Swit_1665	PWY-699	brassinosteroid biosynthesis I
Swit_1665	PWY-7299	progesterone biosynthesis
Swit_1667	PWY-381	nitrate reduction II (assimilatory)
Swit_1667	PWY-5675	nitrate reduction V (assimilatory)
Swit_1667	PWY-6549	L-glutamine biosynthesis III
Swit_1667	PWY-6963	ammonia assimilation cycle I
Swit_1667	PWY-6964	ammonia assimilation cycle II
Swit_1679	PWY-5451	acetone degradation I (to methylglyoxal)
Swit_1679	PWY-6588	pyruvate fermentation to acetone
Swit_1679	PWY-6876	isopropanol biosynthesis
Swit_1679	PWY-7466	acetone degradation III (to propane-1,2-diol)
Swit_1707	PWY-6683	sulfate reduction III (assimilatory)
Swit_1710	PWY-5194	siroheme biosynthesis
Swit_1710	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Swit_1712	PWY-5331	taurine biosynthesis
Swit_1727	PWY-5101	L-isoleucine biosynthesis II
Swit_1727	PWY-5103	L-isoleucine biosynthesis III
Swit_1727	PWY-5104	L-isoleucine biosynthesis IV
Swit_1727	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Swit_1739	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Swit_1739	PWY-7494	choline degradation IV
Swit_1793	PWY-6523	nitrite-dependent anaerobic methane oxidation
Swit_1793	PWY-6748	nitrate reduction VII (denitrification)
Swit_1793	PWY-7084	nitrifier denitrification
Swit_1800	PWY-3781	aerobic respiration I (cytochrome c)
Swit_1800	PWY-4521	arsenite oxidation I (respiratory)
Swit_1800	PWY-6692	Fe(II) oxidation
Swit_1800	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Swit_1801	PWY-3781	aerobic respiration I (cytochrome c)
Swit_1801	PWY-4521	arsenite oxidation I (respiratory)
Swit_1801	PWY-6692	Fe(II) oxidation
Swit_1801	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Swit_1856	PWY-4381	fatty acid biosynthesis initiation I
Swit_1881	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Swit_1881	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Swit_1883	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Swit_1883	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Swit_1883	PWY-7242	D-fructuronate degradation
Swit_1883	PWY-7310	D-glucosaminate degradation
Swit_1887	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
Swit_1887	PWY-7248	pectin degradation III
Swit_1895	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
Swit_1904	PWY-1281	sulfoacetaldehyde degradation I
Swit_1904	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Swit_1904	PWY-5482	pyruvate fermentation to acetate II
Swit_1904	PWY-5485	pyruvate fermentation to acetate IV
Swit_1904	PWY-5497	purine nucleobases degradation II (anaerobic)
Swit_1904	PWY-6637	sulfolactate degradation II
Swit_1904	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Swit_1927	PWY-5316	nicotine biosynthesis
Swit_1927	PWY-7342	superpathway of nicotine biosynthesis
Swit_1932	PWY-5667	CDP-diacylglycerol biosynthesis I
Swit_1932	PWY-5981	CDP-diacylglycerol biosynthesis III
Swit_1936	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Swit_1936	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Swit_1937	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Swit_1937	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Swit_1941	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Swit_1941	PWY-5723	Rubisco shunt
Swit_1986	PWY-5386	methylglyoxal degradation I
Swit_1989	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swit_1989	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swit_1990	PWY-5386	methylglyoxal degradation I
Swit_1994	PWY-5451	acetone degradation I (to methylglyoxal)
Swit_1994	PWY-6588	pyruvate fermentation to acetone
Swit_1994	PWY-6876	isopropanol biosynthesis
Swit_1994	PWY-7466	acetone degradation III (to propane-1,2-diol)
Swit_2031	PWY-723	alkylnitronates degradation
Swit_2064	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Swit_2064	PWY-2201	folate transformations I
Swit_2064	PWY-3841	folate transformations II
Swit_2064	PWY-5030	L-histidine degradation III
Swit_2064	PWY-5497	purine nucleobases degradation II (anaerobic)
Swit_2064	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Swit_2076	PWY-2941	L-lysine biosynthesis II
Swit_2076	PWY-2942	L-lysine biosynthesis III
Swit_2076	PWY-5097	L-lysine biosynthesis VI
Swit_2102	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Swit_2102	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Swit_2112	PWY-5162	2-oxopentenoate degradation
Swit_2112	PWY-5436	L-threonine degradation IV
Swit_2112	PWY-5480	pyruvate fermentation to ethanol I
Swit_2112	PWY-6587	pyruvate fermentation to ethanol III
Swit_2112	PWY-7085	triethylamine degradation
Swit_2112	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Swit_2113	PWY-5162	2-oxopentenoate degradation
Swit_2126	PWY-7560	methylerythritol phosphate pathway II
Swit_2145	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Swit_2158	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Swit_2162	PWY-4381	fatty acid biosynthesis initiation I
Swit_2162	PWY-5743	3-hydroxypropanoate cycle
Swit_2162	PWY-5744	glyoxylate assimilation
Swit_2162	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swit_2162	PWY-6679	jadomycin biosynthesis
Swit_2162	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Swit_2171	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Swit_2233	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Swit_2233	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Swit_2233	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Swit_2233	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Swit_2243	PWY-4202	arsenate detoxification I (glutaredoxin)
Swit_2243	PWY-4621	arsenate detoxification II (glutaredoxin)
Swit_2329	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
Swit_2331	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
Swit_2348	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Swit_2348	PWY-7177	UTP and CTP dephosphorylation II
Swit_2348	PWY-7185	UTP and CTP dephosphorylation I
Swit_2350	PWY-1042	glycolysis IV (plant cytosol)
Swit_2350	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swit_2350	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Swit_2350	PWY-7003	glycerol degradation to butanol
Swit_2352	PWY-5958	acridone alkaloid biosynthesis
Swit_2352	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Swit_2352	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Swit_2364	PWY-6840	homoglutathione biosynthesis
Swit_2364	PWY-7255	ergothioneine biosynthesis I (bacteria)
Swit_2371	PWY-6655	xanthan biosynthesis
Swit_2371	PWY-6658	acetan biosynthesis
Swit_2397	PWY-5491	diethylphosphate degradation
Swit_2399	PWY-2201	folate transformations I
Swit_2399	PWY-3841	folate transformations II
Swit_2401	PWY-2201	folate transformations I
Swit_2401	PWY-3841	folate transformations II
Swit_2405	PWY-6348	phosphate acquisition
Swit_2405	PWY-6357	phosphate utilization in cell wall regeneration
Swit_2405	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Swit_2405	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Swit_2439	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Swit_2444	PWY-6167	flavin biosynthesis II (archaea)
Swit_2444	PWY-6168	flavin biosynthesis III (fungi)
Swit_2444	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Swit_2445	PWY-6167	flavin biosynthesis II (archaea)
Swit_2445	PWY-6168	flavin biosynthesis III (fungi)
Swit_2445	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Swit_2446	PWY-6167	flavin biosynthesis II (archaea)
Swit_2446	PWY-6168	flavin biosynthesis III (fungi)
Swit_2457	PWY-7205	CMP phosphorylation
Swit_2458	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Swit_2485	PWY-6610	adenine and adenosine salvage IV
Swit_2496	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swit_2496	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swit_2537	PWY-6854	ethylene biosynthesis III (microbes)
Swit_2543	PWY-5381	pyridine nucleotide cycling (plants)
Swit_2543	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Swit_2595	PWY-5381	pyridine nucleotide cycling (plants)
Swit_2595	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Swit_2601	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Swit_2601	PWY-5723	Rubisco shunt
Swit_2601	PWY-6891	thiazole biosynthesis II (Bacillus)
Swit_2601	PWY-6892	thiazole biosynthesis I (E. coli)
Swit_2601	PWY-6901	superpathway of glucose and xylose degradation
Swit_2601	PWY-7560	methylerythritol phosphate pathway II
Swit_2602	PWY-1042	glycolysis IV (plant cytosol)
Swit_2602	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swit_2602	PWY-6901	superpathway of glucose and xylose degradation
Swit_2602	PWY-7003	glycerol degradation to butanol
Swit_2604	PWY-1042	glycolysis IV (plant cytosol)
Swit_2604	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swit_2604	PWY-6886	1-butanol autotrophic biosynthesis
Swit_2604	PWY-6901	superpathway of glucose and xylose degradation
Swit_2604	PWY-7003	glycerol degradation to butanol
Swit_2606	PWY-1042	glycolysis IV (plant cytosol)
Swit_2606	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Swit_2606	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swit_2606	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Swit_2606	PWY-7385	1,3-propanediol biosynthesis (engineered)
Swit_2620	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Swit_2655	PWY-4041	&gamma;-glutamyl cycle
Swit_2655	PWY-5826	hypoglycin biosynthesis
Swit_2662	PWY-6829	tRNA methylation (yeast)
Swit_2662	PWY-7285	methylwyosine biosynthesis
Swit_2662	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Swit_2664	PWY-2941	L-lysine biosynthesis II
Swit_2664	PWY-2942	L-lysine biosynthesis III
Swit_2664	PWY-5097	L-lysine biosynthesis VI
Swit_2664	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Swit_2664	PWY-6559	spermidine biosynthesis II
Swit_2664	PWY-6562	norspermidine biosynthesis
Swit_2664	PWY-7153	grixazone biosynthesis
Swit_2664	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Swit_2665	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Swit_2669	PWY-6617	adenosine nucleotides degradation III
Swit_2674	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Swit_2685	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Swit_2691	PWY-702	L-methionine biosynthesis II
Swit_2692	PWY-7560	methylerythritol phosphate pathway II
Swit_2699	PWY-6654	phosphopantothenate biosynthesis III
Swit_2700	PWY-5913	TCA cycle VI (obligate autotrophs)
Swit_2700	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Swit_2700	PWY-6638	sulfolactate degradation III
Swit_2700	PWY-6642	(<i>R</i>)-cysteate degradation
Swit_2700	PWY-6643	coenzyme M biosynthesis II
Swit_2700	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Swit_2700	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Swit_2700	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Swit_2714	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Swit_2715	PWY-5392	reductive TCA cycle II
Swit_2715	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Swit_2715	PWY-5690	TCA cycle II (plants and fungi)
Swit_2715	PWY-5913	TCA cycle VI (obligate autotrophs)
Swit_2715	PWY-6728	methylaspartate cycle
Swit_2715	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swit_2715	PWY-7254	TCA cycle VII (acetate-producers)
Swit_2715	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Swit_2723	PWY-3801	sucrose degradation II (sucrose synthase)
Swit_2723	PWY-5054	sorbitol biosynthesis I
Swit_2723	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Swit_2723	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Swit_2723	PWY-5659	GDP-mannose biosynthesis
Swit_2723	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Swit_2723	PWY-621	sucrose degradation III (sucrose invertase)
Swit_2723	PWY-622	starch biosynthesis
Swit_2723	PWY-6531	mannitol cycle
Swit_2723	PWY-6981	chitin biosynthesis
Swit_2723	PWY-7238	sucrose biosynthesis II
Swit_2723	PWY-7347	sucrose biosynthesis III
Swit_2723	PWY-7385	1,3-propanediol biosynthesis (engineered)
Swit_2728	PWY-4381	fatty acid biosynthesis initiation I
Swit_2728	PWY-5743	3-hydroxypropanoate cycle
Swit_2728	PWY-5744	glyoxylate assimilation
Swit_2728	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swit_2728	PWY-6679	jadomycin biosynthesis
Swit_2728	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Swit_2729	PWY-2161	folate polyglutamylation
Swit_2732	PWY-5747	2-methylcitrate cycle II
Swit_2737	PWY-5686	UMP biosynthesis
Swit_2737	PWY-5704	urea degradation II
Swit_2760	PWY-1281	sulfoacetaldehyde degradation I
Swit_2760	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Swit_2760	PWY-5482	pyruvate fermentation to acetate II
Swit_2760	PWY-5485	pyruvate fermentation to acetate IV
Swit_2760	PWY-5497	purine nucleobases degradation II (anaerobic)
Swit_2760	PWY-6637	sulfolactate degradation II
Swit_2760	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Swit_2773	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Swit_2773	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Swit_2773	PWY-6896	thiamin salvage I
Swit_2773	PWY-6897	thiamin salvage II
Swit_2791	PWY-6749	CMP-legionaminate biosynthesis I
Swit_2798	PWY-5386	methylglyoxal degradation I
Swit_2810	PWY-6785	hydrogen production VIII
Swit_2830	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Swit_2833	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Swit_2833	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Swit_2835	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Swit_2855	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Swit_2855	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Swit_2855	PWY-6897	thiamin salvage II
Swit_2855	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Swit_2855	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Swit_2855	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Swit_2855	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Swit_2856	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Swit_2859	PWY-5194	siroheme biosynthesis
Swit_2859	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Swit_2861	PWY-3801	sucrose degradation II (sucrose synthase)
Swit_2861	PWY-6527	stachyose degradation
Swit_2861	PWY-6981	chitin biosynthesis
Swit_2861	PWY-7238	sucrose biosynthesis II
Swit_2861	PWY-7343	UDP-glucose biosynthesis
Swit_2862	PWY-2941	L-lysine biosynthesis II
Swit_2862	PWY-2942	L-lysine biosynthesis III
Swit_2862	PWY-5097	L-lysine biosynthesis VI
Swit_2864	PWY-4983	L-citrulline-nitric oxide cycle
Swit_2864	PWY-4984	urea cycle
Swit_2864	PWY-5	canavanine biosynthesis
Swit_2864	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Swit_2864	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Swit_2872	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Swit_2872	PWY-2201	folate transformations I
Swit_2872	PWY-3841	folate transformations II
Swit_2872	PWY-5030	L-histidine degradation III
Swit_2872	PWY-5497	purine nucleobases degradation II (anaerobic)
Swit_2872	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Swit_2882	PWY-7533	gliotoxin biosynthesis
Swit_2887	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Swit_2888	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Swit_2888	PWY-6855	chitin degradation I (archaea)
Swit_2888	PWY-6906	chitin derivatives degradation
Swit_2890	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Swit_2891	PWY-5743	3-hydroxypropanoate cycle
Swit_2891	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swit_2891	PWY-6728	methylaspartate cycle
Swit_2891	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Swit_2892	PWY-5743	3-hydroxypropanoate cycle
Swit_2892	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swit_2892	PWY-6728	methylaspartate cycle
Swit_2892	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Swit_2894	PWY-4381	fatty acid biosynthesis initiation I
Swit_2894	PWY-5743	3-hydroxypropanoate cycle
Swit_2894	PWY-5744	glyoxylate assimilation
Swit_2894	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swit_2894	PWY-6679	jadomycin biosynthesis
Swit_2894	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Swit_2898	PWY-1361	benzoyl-CoA degradation I (aerobic)
Swit_2898	PWY-5109	2-methylbutanoate biosynthesis
Swit_2898	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Swit_2898	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Swit_2898	PWY-5177	glutaryl-CoA degradation
Swit_2898	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swit_2898	PWY-6435	4-hydroxybenzoate biosynthesis V
Swit_2898	PWY-6583	pyruvate fermentation to butanol I
Swit_2898	PWY-6863	pyruvate fermentation to hexanol
Swit_2898	PWY-6883	pyruvate fermentation to butanol II
Swit_2898	PWY-6944	androstenedione degradation
Swit_2898	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Swit_2898	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Swit_2898	PWY-7007	methyl ketone biosynthesis
Swit_2898	PWY-7046	4-coumarate degradation (anaerobic)
Swit_2898	PWY-7094	fatty acid salvage
Swit_2898	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Swit_2898	PWY-735	jasmonic acid biosynthesis
Swit_2898	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Swit_2910	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Swit_2910	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Swit_2915	PWY-6823	molybdenum cofactor biosynthesis
Swit_2915	PWY-6891	thiazole biosynthesis II (Bacillus)
Swit_2915	PWY-6892	thiazole biosynthesis I (E. coli)
Swit_2915	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Swit_2920	PWY-5686	UMP biosynthesis
Swit_2926	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swit_2928	PWY-2941	L-lysine biosynthesis II
Swit_2928	PWY-5097	L-lysine biosynthesis VI
Swit_2933	PWY-6854	ethylene biosynthesis III (microbes)
Swit_2970	PWY-4983	L-citrulline-nitric oxide cycle
Swit_2970	PWY-4984	urea cycle
Swit_2970	PWY-5	canavanine biosynthesis
Swit_2970	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Swit_2970	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Swit_2978	PWY-3821	galactose degradation III
Swit_2978	PWY-6317	galactose degradation I (Leloir pathway)
Swit_2978	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Swit_2978	PWY-6527	stachyose degradation
Swit_2978	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Swit_2978	PWY-7344	UDP-D-galactose biosynthesis
Swit_2981	PWY-2301	<i>myo</i>-inositol biosynthesis
Swit_2981	PWY-4702	phytate degradation I
Swit_2981	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Swit_2996	PWY-3781	aerobic respiration I (cytochrome c)
Swit_2996	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Swit_2996	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Swit_2996	PWY-6692	Fe(II) oxidation
Swit_2997	PWY-3781	aerobic respiration I (cytochrome c)
Swit_2997	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Swit_2997	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Swit_2997	PWY-6692	Fe(II) oxidation
Swit_2999	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Swit_2999	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Swit_3000	PWY-3961	phosphopantothenate biosynthesis II
Swit_3005	PWY-5344	L-homocysteine biosynthesis
Swit_3015	PWY-1042	glycolysis IV (plant cytosol)
Swit_3015	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Swit_3015	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swit_3015	PWY-7385	1,3-propanediol biosynthesis (engineered)
Swit_3037	PWY-5101	L-isoleucine biosynthesis II
Swit_3037	PWY-5103	L-isoleucine biosynthesis III
Swit_3037	PWY-5104	L-isoleucine biosynthesis IV
Swit_3037	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Swit_3108	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Swit_3108	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Swit_3108	PWY-6268	adenosylcobalamin salvage from cobalamin
Swit_3108	PWY-6269	adenosylcobalamin salvage from cobinamide II
Swit_3120	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Swit_3121	PWY-1042	glycolysis IV (plant cytosol)
Swit_3121	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Swit_3121	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swit_3121	PWY-5723	Rubisco shunt
Swit_3121	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Swit_3121	PWY-6886	1-butanol autotrophic biosynthesis
Swit_3121	PWY-6901	superpathway of glucose and xylose degradation
Swit_3121	PWY-7003	glycerol degradation to butanol
Swit_3121	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Swit_3121	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Swit_3123	PWY-6654	phosphopantothenate biosynthesis III
Swit_3132	PWY-6123	inosine-5'-phosphate biosynthesis I
Swit_3132	PWY-7234	inosine-5'-phosphate biosynthesis III
Swit_3133	PWY-1622	formaldehyde assimilation I (serine pathway)
Swit_3133	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swit_3135	PWY-1622	formaldehyde assimilation I (serine pathway)
Swit_3135	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Swit_3135	PWY-5913	TCA cycle VI (obligate autotrophs)
Swit_3135	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Swit_3135	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Swit_3135	PWY-6549	L-glutamine biosynthesis III
Swit_3135	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Swit_3135	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Swit_3135	PWY-7124	ethylene biosynthesis V (engineered)
Swit_3136	PWY-723	alkylnitronates degradation
Swit_3149	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Swit_3149	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Swit_3149	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Swit_3151	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Swit_3151	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Swit_3151	PWY-6897	thiamin salvage II
Swit_3151	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Swit_3151	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Swit_3151	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Swit_3151	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Swit_3164	PWY-6854	ethylene biosynthesis III (microbes)
Swit_3197	PWY-5392	reductive TCA cycle II
Swit_3197	PWY-5537	pyruvate fermentation to acetate V
Swit_3197	PWY-5538	pyruvate fermentation to acetate VI
Swit_3197	PWY-5690	TCA cycle II (plants and fungi)
Swit_3197	PWY-5913	TCA cycle VI (obligate autotrophs)
Swit_3197	PWY-6728	methylaspartate cycle
Swit_3197	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swit_3197	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Swit_3201	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Swit_3213	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Swit_3217	PWY-6823	molybdenum cofactor biosynthesis
Swit_3227	PWY-5958	acridone alkaloid biosynthesis
Swit_3227	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Swit_3227	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Swit_3247	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Swit_3251	PWY-6967	methylamine degradation I
Swit_3254	PWY-6967	methylamine degradation I
Swit_3271	PWY-5101	L-isoleucine biosynthesis II
Swit_3271	PWY-5103	L-isoleucine biosynthesis III
Swit_3271	PWY-5104	L-isoleucine biosynthesis IV
Swit_3271	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Swit_3287	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Swit_3329	PWY-2582	brassinosteroid biosynthesis II
Swit_3329	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Swit_3329	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Swit_3329	PWY-6948	sitosterol degradation to androstenedione
Swit_3329	PWY-699	brassinosteroid biosynthesis I
Swit_3329	PWY-7299	progesterone biosynthesis
Swit_3341	PWY-5278	sulfite oxidation III
Swit_3341	PWY-5340	sulfate activation for sulfonation
Swit_3341	PWY-6683	sulfate reduction III (assimilatory)
Swit_3341	PWY-6932	selenate reduction
Swit_3342	PWY-5278	sulfite oxidation III
Swit_3342	PWY-5340	sulfate activation for sulfonation
Swit_3342	PWY-6683	sulfate reduction III (assimilatory)
Swit_3342	PWY-6932	selenate reduction
Swit_3373	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Swit_3373	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Swit_3414	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Swit_3414	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Swit_3438	PWY-5659	GDP-mannose biosynthesis
Swit_3438	PWY-6073	alginate biosynthesis I (algal)
Swit_3438	PWY-6082	alginate biosynthesis II (bacterial)
Swit_3438	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Swit_3447	PWY-3461	L-tyrosine biosynthesis II
Swit_3447	PWY-3462	L-phenylalanine biosynthesis II
Swit_3447	PWY-6120	L-tyrosine biosynthesis III
Swit_3447	PWY-6627	salinosporamide A biosynthesis
Swit_3479	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Swit_3479	PWY-7118	chitin degradation to ethanol
Swit_3490	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Swit_3490	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Swit_3523	PWY-5647	2-nitrobenzoate degradation I
Swit_3523	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Swit_3523	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Swit_3523	PWY-6505	L-tryptophan degradation XII (Geobacillus)
Swit_3556	PWY-4381	fatty acid biosynthesis initiation I
Swit_3566	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Swit_3570	PWY-5958	acridone alkaloid biosynthesis
Swit_3570	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Swit_3570	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Swit_3582	PWY-7533	gliotoxin biosynthesis
Swit_3585	PWY-6936	seleno-amino acid biosynthesis
Swit_3585	PWY-7274	D-cycloserine biosynthesis
Swit_3592	PWY-6823	molybdenum cofactor biosynthesis
Swit_3594	PWY-5269	cardiolipin biosynthesis II
Swit_3594	PWY-5668	cardiolipin biosynthesis I
Swit_3599	PWY-723	alkylnitronates degradation
Swit_3625	PWY-4381	fatty acid biosynthesis initiation I
Swit_3626	PWY-723	alkylnitronates degradation
Swit_3730	PWY-5506	methanol oxidation to formaldehyde IV
Swit_3734	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
Swit_3765	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swit_3765	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swit_3771	PWY-6167	flavin biosynthesis II (archaea)
Swit_3771	PWY-6168	flavin biosynthesis III (fungi)
Swit_3771	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Swit_3774	PWY-6700	queuosine biosynthesis
Swit_3775	PWY-5350	thiosulfate disproportionation III (rhodanese)
Swit_3776	PWY-6936	seleno-amino acid biosynthesis
Swit_3785	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Swit_3785	PWY-6167	flavin biosynthesis II (archaea)
Swit_3785	PWY-6168	flavin biosynthesis III (fungi)
Swit_3786	PWY-3841	folate transformations II
Swit_3786	PWY-6614	tetrahydrofolate biosynthesis
Swit_3787	PWY-3841	folate transformations II
Swit_3787	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Swit_3787	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swit_3787	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Swit_3787	PWY-7199	pyrimidine deoxyribonucleosides salvage
Swit_3787	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Swit_3789	PWY-6168	flavin biosynthesis III (fungi)
Swit_3789	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Swit_3796	PWY-1361	benzoyl-CoA degradation I (aerobic)
Swit_3796	PWY-5109	2-methylbutanoate biosynthesis
Swit_3796	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Swit_3796	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Swit_3796	PWY-5177	glutaryl-CoA degradation
Swit_3796	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swit_3796	PWY-6435	4-hydroxybenzoate biosynthesis V
Swit_3796	PWY-6583	pyruvate fermentation to butanol I
Swit_3796	PWY-6863	pyruvate fermentation to hexanol
Swit_3796	PWY-6883	pyruvate fermentation to butanol II
Swit_3796	PWY-6944	androstenedione degradation
Swit_3796	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Swit_3796	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Swit_3796	PWY-7007	methyl ketone biosynthesis
Swit_3796	PWY-7046	4-coumarate degradation (anaerobic)
Swit_3796	PWY-7094	fatty acid salvage
Swit_3796	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Swit_3796	PWY-735	jasmonic acid biosynthesis
Swit_3796	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Swit_3814	PWY-7199	pyrimidine deoxyribonucleosides salvage
Swit_3823	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Swit_3823	PWY-7536	2-amino-3-hydroxycyclopent-2-enone biosynthesis
Swit_3824	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swit_3824	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swit_3838	PWY-6728	methylaspartate cycle
Swit_3838	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swit_3838	PWY-7118	chitin degradation to ethanol
Swit_3838	PWY-7294	xylose degradation IV
Swit_3838	PWY-7295	L-arabinose degradation IV
Swit_3872	PWY-6012	acyl carrier protein metabolism I
Swit_3872	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Swit_3874	PWY-5686	UMP biosynthesis
Swit_3876	PWY-3781	aerobic respiration I (cytochrome c)
Swit_3876	PWY-4521	arsenite oxidation I (respiratory)
Swit_3876	PWY-6692	Fe(II) oxidation
Swit_3876	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Swit_3943	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swit_3943	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swit_3944	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swit_3944	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swit_3946	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swit_3946	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swit_3947	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Swit_3947	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Swit_3947	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Swit_3947	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Swit_3949	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swit_3949	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swit_3950	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Swit_3950	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Swit_3950	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Swit_3951	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swit_3951	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swit_3964	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Swit_3964	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Swit_3970	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Swit_3970	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Swit_3970	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Swit_4019	PWY-3221	dTDP-L-rhamnose biosynthesis II
Swit_4019	PWY-6808	dTDP-D-forosamine biosynthesis
Swit_4019	PWY-6942	dTDP-D-desosamine biosynthesis
Swit_4019	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Swit_4019	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Swit_4019	PWY-6974	dTDP-L-olivose biosynthesis
Swit_4019	PWY-6976	dTDP-L-mycarose biosynthesis
Swit_4019	PWY-7104	dTDP-L-megosamine biosynthesis
Swit_4019	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Swit_4019	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Swit_4019	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Swit_4019	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Swit_4019	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Swit_4019	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Swit_4019	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Swit_4019	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Swit_4021	PWY-3221	dTDP-L-rhamnose biosynthesis II
Swit_4021	PWY-6808	dTDP-D-forosamine biosynthesis
Swit_4021	PWY-6942	dTDP-D-desosamine biosynthesis
Swit_4021	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Swit_4021	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Swit_4021	PWY-6974	dTDP-L-olivose biosynthesis
Swit_4021	PWY-6976	dTDP-L-mycarose biosynthesis
Swit_4021	PWY-7104	dTDP-L-megosamine biosynthesis
Swit_4021	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Swit_4021	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Swit_4021	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Swit_4021	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Swit_4021	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Swit_4021	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Swit_4021	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Swit_4021	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Swit_4050	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swit_4058	PWY-6683	sulfate reduction III (assimilatory)
Swit_4060	PWY-5194	siroheme biosynthesis
Swit_4060	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Swit_4064	PWY-3841	folate transformations II
Swit_4064	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Swit_4064	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swit_4064	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Swit_4064	PWY-7199	pyrimidine deoxyribonucleosides salvage
Swit_4064	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Swit_4079	PWY-5057	L-valine degradation II
Swit_4079	PWY-5076	L-leucine degradation III
Swit_4079	PWY-5078	L-isoleucine degradation II
Swit_4079	PWY-5101	L-isoleucine biosynthesis II
Swit_4079	PWY-5103	L-isoleucine biosynthesis III
Swit_4079	PWY-5104	L-isoleucine biosynthesis IV
Swit_4079	PWY-5108	L-isoleucine biosynthesis V
Swit_4089	PWY-5686	UMP biosynthesis
Swit_4106	PWY-7560	methylerythritol phosphate pathway II
Swit_4138	PWY-5642	2,4-dinitrotoluene degradation
Swit_4138	PWY-6373	acrylate degradation
Swit_4139	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Swit_4161	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swit_4161	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swit_4169	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Swit_4180	PWY-723	alkylnitronates degradation
Swit_4187	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Swit_4192	PWY-5913	TCA cycle VI (obligate autotrophs)
Swit_4192	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Swit_4192	PWY-6638	sulfolactate degradation III
Swit_4192	PWY-6642	(<i>R</i>)-cysteate degradation
Swit_4192	PWY-6643	coenzyme M biosynthesis II
Swit_4192	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Swit_4192	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Swit_4192	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Swit_4209	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Swit_4220	PWY-4261	glycerol degradation I
Swit_4221	PWY-4261	glycerol degradation I
Swit_4221	PWY-6118	glycerol-3-phosphate shuttle
Swit_4221	PWY-6952	glycerophosphodiester degradation
Swit_4259	PWY-5451	acetone degradation I (to methylglyoxal)
Swit_4259	PWY-6588	pyruvate fermentation to acetone
Swit_4259	PWY-6876	isopropanol biosynthesis
Swit_4259	PWY-7466	acetone degradation III (to propane-1,2-diol)
Swit_4286	PWY-5794	malonate degradation I (biotin-independent)
Swit_4286	PWY-6060	malonate degradation II (biotin-dependent)
Swit_4288	PWY-4381	fatty acid biosynthesis initiation I
Swit_4288	PWY-5743	3-hydroxypropanoate cycle
Swit_4288	PWY-5744	glyoxylate assimilation
Swit_4288	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swit_4288	PWY-6060	malonate degradation II (biotin-dependent)
Swit_4288	PWY-6679	jadomycin biosynthesis
Swit_4288	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Swit_4289	PWY-6060	malonate degradation II (biotin-dependent)
Swit_4290	PWY-5796	malonate decarboxylase activation
Swit_4291	PWY-5796	malonate decarboxylase activation
Swit_4294	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swit_4294	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swit_4317	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Swit_4336	PWY-1361	benzoyl-CoA degradation I (aerobic)
Swit_4336	PWY-2361	3-oxoadipate degradation
Swit_4336	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Swit_4363	PWY-6967	methylamine degradation I
Swit_4365	PWY-6967	methylamine degradation I
Swit_4393	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Swit_4426	PWY-4041	&gamma;-glutamyl cycle
Swit_4426	PWY-5826	hypoglycin biosynthesis
Swit_4472	PWY-3341	L-proline biosynthesis III
Swit_4472	PWY-4981	L-proline biosynthesis II (from arginine)
Swit_4472	PWY-6344	L-ornithine degradation II (Stickland reaction)
Swit_4474	PWY-6123	inosine-5'-phosphate biosynthesis I
Swit_4474	PWY-6124	inosine-5'-phosphate biosynthesis II
Swit_4474	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Swit_4474	PWY-7234	inosine-5'-phosphate biosynthesis III
Swit_4494	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Swit_4502	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
Swit_4502	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
Swit_4502	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
Swit_4502	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Swit_4502	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
Swit_4502	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
Swit_4502	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
Swit_4502	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
Swit_4502	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Swit_4502	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
Swit_4503	PWY-2941	L-lysine biosynthesis II
Swit_4503	PWY-2942	L-lysine biosynthesis III
Swit_4503	PWY-5097	L-lysine biosynthesis VI
Swit_4503	PWY-6559	spermidine biosynthesis II
Swit_4503	PWY-6562	norspermidine biosynthesis
Swit_4503	PWY-7153	grixazone biosynthesis
Swit_4504	PWY-723	alkylnitronates degradation
Swit_4518	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Swit_4518	PWY-7494	choline degradation IV
Swit_4534	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Swit_4540	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
Swit_4540	PWY-5940	streptomycin biosynthesis
Swit_4553	PWY-6749	CMP-legionaminate biosynthesis I
Swit_4554	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Swit_4555	PWY-181	photorespiration
Swit_4556	PWY-5839	menaquinol-7 biosynthesis
Swit_4556	PWY-5844	menaquinol-9 biosynthesis
Swit_4556	PWY-5849	menaquinol-6 biosynthesis
Swit_4556	PWY-5890	menaquinol-10 biosynthesis
Swit_4556	PWY-5891	menaquinol-11 biosynthesis
Swit_4556	PWY-5892	menaquinol-12 biosynthesis
Swit_4556	PWY-5895	menaquinol-13 biosynthesis
Swit_4577	PWY-6614	tetrahydrofolate biosynthesis
Swit_4599	PWY-5676	acetyl-CoA fermentation to butanoate II
Swit_4599	PWY-5741	ethylmalonyl-CoA pathway
Swit_4599	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Swit_4604	PWY-5022	4-aminobutanoate degradation V
Swit_4604	PWY-6728	methylaspartate cycle
Swit_4604	PWY-7126	ethylene biosynthesis IV
Swit_4614	PWY-3781	aerobic respiration I (cytochrome c)
Swit_4614	PWY-4521	arsenite oxidation I (respiratory)
Swit_4614	PWY-6692	Fe(II) oxidation
Swit_4614	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Swit_4630	PWY-5028	L-histidine degradation II
Swit_4630	PWY-5030	L-histidine degradation III
Swit_4632	PWY-5028	L-histidine degradation II
Swit_4632	PWY-5030	L-histidine degradation III
Swit_4633	PWY-5028	L-histidine degradation II
Swit_4633	PWY-5030	L-histidine degradation III
Swit_4656	PWY-5101	L-isoleucine biosynthesis II
Swit_4656	PWY-5103	L-isoleucine biosynthesis III
Swit_4656	PWY-5104	L-isoleucine biosynthesis IV
Swit_4656	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Swit_4659	PWY-6938	NADH repair
Swit_4666	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Swit_4672	PWY-5392	reductive TCA cycle II
Swit_4672	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Swit_4672	PWY-5690	TCA cycle II (plants and fungi)
Swit_4672	PWY-5913	TCA cycle VI (obligate autotrophs)
Swit_4672	PWY-6728	methylaspartate cycle
Swit_4672	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swit_4672	PWY-7254	TCA cycle VII (acetate-producers)
Swit_4672	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Swit_4676	PWY-7153	grixazone biosynthesis
Swit_4682	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Swit_4688	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Swit_4689	PWY-5381	pyridine nucleotide cycling (plants)
Swit_4697	PWY-4202	arsenate detoxification I (glutaredoxin)
Swit_4697	PWY-4621	arsenate detoxification II (glutaredoxin)
Swit_4700	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Swit_4700	PWY-6416	quinate degradation II
Swit_4700	PWY-6707	gallate biosynthesis
Swit_4701	PWY-6891	thiazole biosynthesis II (Bacillus)
Swit_4701	PWY-6892	thiazole biosynthesis I (E. coli)
Swit_4715	PWY-5316	nicotine biosynthesis
Swit_4715	PWY-7342	superpathway of nicotine biosynthesis
Swit_4716	PWY-5316	nicotine biosynthesis
Swit_4716	PWY-5381	pyridine nucleotide cycling (plants)
Swit_4716	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Swit_4716	PWY-7342	superpathway of nicotine biosynthesis
Swit_4732	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swit_4754	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Swit_4754	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Swit_4769	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Swit_4769	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Swit_4769	PWY-5989	stearate biosynthesis II (bacteria and plants)
Swit_4769	PWY-6113	superpathway of mycolate biosynthesis
Swit_4769	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Swit_4769	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Swit_4769	PWY-7096	triclosan resistance
Swit_4769	PWYG-321	mycolate biosynthesis
Swit_4770	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Swit_4785	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Swit_4785	PWY-6148	tetrahydromethanopterin biosynthesis
Swit_4785	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Swit_4785	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Swit_4786	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Swit_4786	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Swit_4786	PWY-6936	seleno-amino acid biosynthesis
Swit_4786	PWY-702	L-methionine biosynthesis II
Swit_4791	PWY-5747	2-methylcitrate cycle II
Swit_4807	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swit_4807	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swit_4810	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Swit_4810	PWY-7494	choline degradation IV
Swit_4831	PWY-381	nitrate reduction II (assimilatory)
Swit_4831	PWY-5675	nitrate reduction V (assimilatory)
Swit_4831	PWY-6549	L-glutamine biosynthesis III
Swit_4831	PWY-6963	ammonia assimilation cycle I
Swit_4831	PWY-6964	ammonia assimilation cycle II
Swit_4837	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Swit_4859	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Swit_4859	PWY-6549	L-glutamine biosynthesis III
Swit_4859	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Swit_4859	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Swit_4879	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Swit_4879	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Swit_4879	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swit_4879	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Swit_4884	PWY-5839	menaquinol-7 biosynthesis
Swit_4884	PWY-5844	menaquinol-9 biosynthesis
Swit_4884	PWY-5849	menaquinol-6 biosynthesis
Swit_4884	PWY-5890	menaquinol-10 biosynthesis
Swit_4884	PWY-5891	menaquinol-11 biosynthesis
Swit_4884	PWY-5892	menaquinol-12 biosynthesis
Swit_4884	PWY-5895	menaquinol-13 biosynthesis