Spiaf_0010 PWY-5041 S-adenosyl-L-methionine cycle II Spiaf_0011 PWY-5041 S-adenosyl-L-methionine cycle II Spiaf_0011 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis Spiaf_0020 PWY-6788 cellulose degradation II (fungi) Spiaf_0030 PWY-3221 dTDP-L-rhamnose biosynthesis II Spiaf_0030 PWY-6808 dTDP-D-forosamine biosynthesis Spiaf_0030 PWY-6942 dTDP-D-desosamine biosynthesis Spiaf_0030 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis Spiaf_0030 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis Spiaf_0030 PWY-6974 dTDP-L-olivose biosynthesis Spiaf_0030 PWY-6976 dTDP-L-mycarose biosynthesis Spiaf_0030 PWY-7104 dTDP-L-megosamine biosynthesis Spiaf_0030 PWY-7301 dTDP-β-L-noviose biosynthesis Spiaf_0030 PWY-7312 dTDP-D-β-fucofuranose biosynthesis Spiaf_0030 PWY-7315 dTDP-N-acetylthomosamine biosynthesis Spiaf_0030 PWY-7316 dTDP-N-acetylviosamine biosynthesis Spiaf_0030 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis Spiaf_0030 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis Spiaf_0030 PWY-7414 dTDP-α-D-mycaminose biosynthesis Spiaf_0030 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis Spiaf_0031 PWY-3221 dTDP-L-rhamnose biosynthesis II Spiaf_0031 PWY-6808 dTDP-D-forosamine biosynthesis Spiaf_0031 PWY-6942 dTDP-D-desosamine biosynthesis Spiaf_0031 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis Spiaf_0031 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis Spiaf_0031 PWY-6974 dTDP-L-olivose biosynthesis Spiaf_0031 PWY-6976 dTDP-L-mycarose biosynthesis Spiaf_0031 PWY-7104 dTDP-L-megosamine biosynthesis Spiaf_0031 PWY-7301 dTDP-β-L-noviose biosynthesis Spiaf_0031 PWY-7312 dTDP-D-β-fucofuranose biosynthesis Spiaf_0031 PWY-7315 dTDP-N-acetylthomosamine biosynthesis Spiaf_0031 PWY-7316 dTDP-N-acetylviosamine biosynthesis Spiaf_0031 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis Spiaf_0031 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis Spiaf_0031 PWY-7414 dTDP-α-D-mycaminose biosynthesis Spiaf_0031 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis Spiaf_0064 PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) Spiaf_0067 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Spiaf_0067 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Spiaf_0067 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Spiaf_0086 PWY-2941 L-lysine biosynthesis II Spiaf_0086 PWY-2942 L-lysine biosynthesis III Spiaf_0086 PWY-5097 L-lysine biosynthesis VI Spiaf_0088 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Spiaf_0088 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Spiaf_0088 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Spiaf_0089 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Spiaf_0089 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Spiaf_0089 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Spiaf_0101 PWY-5941 glycogen degradation II (eukaryotic) Spiaf_0101 PWY-6724 starch degradation II Spiaf_0101 PWY-6737 starch degradation V Spiaf_0101 PWY-7238 sucrose biosynthesis II Spiaf_0126 PWY-6891 thiazole biosynthesis II (Bacillus) Spiaf_0126 PWY-6892 thiazole biosynthesis I (E. coli) Spiaf_0126 PWY-7560 methylerythritol phosphate pathway II Spiaf_0130 PWY-5392 reductive TCA cycle II Spiaf_0130 PWY-5537 pyruvate fermentation to acetate V Spiaf_0130 PWY-5538 pyruvate fermentation to acetate VI Spiaf_0130 PWY-5690 TCA cycle II (plants and fungi) Spiaf_0130 PWY-5913 TCA cycle VI (obligate autotrophs) Spiaf_0130 PWY-6728 methylaspartate cycle Spiaf_0130 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Spiaf_0130 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Spiaf_0131 PWY-5392 reductive TCA cycle II Spiaf_0131 PWY-5537 pyruvate fermentation to acetate V Spiaf_0131 PWY-5538 pyruvate fermentation to acetate VI Spiaf_0131 PWY-5690 TCA cycle II (plants and fungi) Spiaf_0131 PWY-5913 TCA cycle VI (obligate autotrophs) Spiaf_0131 PWY-6728 methylaspartate cycle Spiaf_0131 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Spiaf_0131 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Spiaf_0137 PWY-6785 hydrogen production VIII Spiaf_0166 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Spiaf_0166 PWY-6549 L-glutamine biosynthesis III Spiaf_0166 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Spiaf_0166 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Spiaf_0179 PWY-6409 pyoverdine I biosynthesis Spiaf_0179 PWY-6562 norspermidine biosynthesis Spiaf_0179 PWY-761 rhizobactin 1021 biosynthesis Spiaf_0190 PWY-3801 sucrose degradation II (sucrose synthase) Spiaf_0190 PWY-5054 sorbitol biosynthesis I Spiaf_0190 PWY-5384 sucrose degradation IV (sucrose phosphorylase) Spiaf_0190 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Spiaf_0190 PWY-5659 GDP-mannose biosynthesis Spiaf_0190 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Spiaf_0190 PWY-621 sucrose degradation III (sucrose invertase) Spiaf_0190 PWY-622 starch biosynthesis Spiaf_0190 PWY-6531 mannitol cycle Spiaf_0190 PWY-6981 chitin biosynthesis Spiaf_0190 PWY-7238 sucrose biosynthesis II Spiaf_0190 PWY-7347 sucrose biosynthesis III Spiaf_0190 PWY-7385 1,3-propanediol biosynthesis (engineered) Spiaf_0191 PWY-4983 L-citrulline-nitric oxide cycle Spiaf_0191 PWY-4984 urea cycle Spiaf_0191 PWY-5 canavanine biosynthesis Spiaf_0191 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Spiaf_0191 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Spiaf_0193 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Spiaf_0193 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Spiaf_0194 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Spiaf_0194 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Spiaf_0198 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Spiaf_0230 PWY-5663 tetrahydrobiopterin biosynthesis I Spiaf_0230 PWY-5664 tetrahydrobiopterin biosynthesis II Spiaf_0230 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Spiaf_0230 PWY-6703 preQ0 biosynthesis Spiaf_0230 PWY-6983 tetrahydrobiopterin biosynthesis III Spiaf_0230 PWY-7442 drosopterin and aurodrosopterin biosynthesis Spiaf_0243 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Spiaf_0243 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Spiaf_0246 PWY-4381 fatty acid biosynthesis initiation I Spiaf_0247 PWY-4381 fatty acid biosynthesis initiation I Spiaf_0247 PWY-6799 fatty acid biosynthesis (plant mitochondria) Spiaf_0247 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Spiaf_0248 PWY-5367 petroselinate biosynthesis Spiaf_0248 PWY-5971 palmitate biosynthesis II (bacteria and plants) Spiaf_0248 PWY-5973 cis-vaccenate biosynthesis Spiaf_0248 PWY-5989 stearate biosynthesis II (bacteria and plants) Spiaf_0248 PWY-5994 palmitate biosynthesis I (animals and fungi) Spiaf_0248 PWY-6113 superpathway of mycolate biosynthesis Spiaf_0248 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Spiaf_0248 PWY-6519 8-amino-7-oxononanoate biosynthesis I Spiaf_0248 PWY-6951 Spiaf_0248|Spiaf_0248|YP_005474063.1|GeneID:12060261 Spiaf_0248 PWY-7053 docosahexaenoate biosynthesis I (lower eukaryotes) Spiaf_0248 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Spiaf_0248 PWYG-321 mycolate biosynthesis Spiaf_0279 PWY-6527 stachyose degradation Spiaf_0295 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Spiaf_0295 PWY-6855 chitin degradation I (archaea) Spiaf_0295 PWY-6906 chitin derivatives degradation Spiaf_0303 PWY-2661 trehalose biosynthesis V Spiaf_0304 PWY-2661 trehalose biosynthesis V Spiaf_0307 PWY-381 nitrate reduction II (assimilatory) Spiaf_0307 PWY-5675 nitrate reduction V (assimilatory) Spiaf_0307 PWY-6549 L-glutamine biosynthesis III Spiaf_0307 PWY-6963 ammonia assimilation cycle I Spiaf_0307 PWY-6964 ammonia assimilation cycle II Spiaf_0325 PWY-4261 glycerol degradation I Spiaf_0333 PWY-5667 CDP-diacylglycerol biosynthesis I Spiaf_0333 PWY-5981 CDP-diacylglycerol biosynthesis III Spiaf_0335 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Spiaf_0335 PWY-7176 UTP and CTP de novo biosynthesis Spiaf_0335 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Spiaf_0335 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Spiaf_0335 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Spiaf_0335 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Spiaf_0335 PWY-7205 CMP phosphorylation Spiaf_0335 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Spiaf_0335 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Spiaf_0335 PWY-7221 guanosine ribonucleotides de novo biosynthesis Spiaf_0335 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Spiaf_0335 PWY-7224 purine deoxyribonucleosides salvage Spiaf_0335 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Spiaf_0335 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Spiaf_0348 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Spiaf_0366 PWY-1722 formate reduction to 5,10-methylenetetrahydrofolate Spiaf_0366 PWY-2161 folate polyglutamylation Spiaf_0366 PWY-2201 folate transformations I Spiaf_0366 PWY-3841 folate transformations II Spiaf_0372 PWY-3821 galactose degradation III Spiaf_0372 PWY-6174 mevalonate pathway II (archaea) Spiaf_0372 PWY-6317 galactose degradation I (Leloir pathway) Spiaf_0372 PWY-6527 stachyose degradation Spiaf_0372 PWY-7391 isoprene biosynthesis II (engineered) Spiaf_0372 PWY-922 mevalonate pathway I Spiaf_0374 PWY-7391 isoprene biosynthesis II (engineered) Spiaf_0374 PWY-922 mevalonate pathway I Spiaf_0375 PWY-6174 mevalonate pathway II (archaea) Spiaf_0375 PWY-7391 isoprene biosynthesis II (engineered) Spiaf_0375 PWY-7524 mevalonate pathway III (archaea) Spiaf_0375 PWY-922 mevalonate pathway I Spiaf_0376 PWY-5123 trans, trans-farnesyl diphosphate biosynthesis Spiaf_0376 PWY-6174 mevalonate pathway II (archaea) Spiaf_0376 PWY-6383 mono-trans, poly-cis decaprenyl phosphate biosynthesis Spiaf_0376 PWY-6859 all-trans-farnesol biosynthesis Spiaf_0376 PWY-7102 bisabolene biosynthesis Spiaf_0376 PWY-7391 isoprene biosynthesis II (engineered) Spiaf_0376 PWY-7524 mevalonate pathway III (archaea) Spiaf_0376 PWY-7560 methylerythritol phosphate pathway II Spiaf_0376 PWY-922 mevalonate pathway I Spiaf_0377 PWY-6174 mevalonate pathway II (archaea) Spiaf_0377 PWY-7391 isoprene biosynthesis II (engineered) Spiaf_0377 PWY-7524 mevalonate pathway III (archaea) Spiaf_0377 PWY-922 mevalonate pathway I Spiaf_0419 PWY-6700 queuosine biosynthesis Spiaf_0456 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Spiaf_0457 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Spiaf_0457 PWY-5723 Rubisco shunt Spiaf_0460 PWY-6123 inosine-5'-phosphate biosynthesis I Spiaf_0460 PWY-6124 inosine-5'-phosphate biosynthesis II Spiaf_0460 PWY-7234 inosine-5'-phosphate biosynthesis III Spiaf_0466 PWY-2723 trehalose degradation V Spiaf_0466 PWY-6317 galactose degradation I (Leloir pathway) Spiaf_0466 PWY-6737 starch degradation V Spiaf_0478 PWY-6123 inosine-5'-phosphate biosynthesis I Spiaf_0478 PWY-7234 inosine-5'-phosphate biosynthesis III Spiaf_0482 PWY-1042 glycolysis IV (plant cytosol) Spiaf_0482 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Spiaf_0482 PWY-5484 glycolysis II (from fructose 6-phosphate) Spiaf_0482 PWY-7385 1,3-propanediol biosynthesis (engineered) Spiaf_0484 PWY-43 putrescine biosynthesis II Spiaf_0490 PWY-2201 folate transformations I Spiaf_0490 PWY-3841 folate transformations II Spiaf_0522 PWY-5067 glycogen biosynthesis II (from UDP-D-Glucose) Spiaf_0524 PWY-5101 L-isoleucine biosynthesis II Spiaf_0524 PWY-5103 L-isoleucine biosynthesis III Spiaf_0524 PWY-5104 L-isoleucine biosynthesis IV Spiaf_0524 PWY-7111 pyruvate fermentation to isobutanol (engineered) Spiaf_0526 PWY-1042 glycolysis IV (plant cytosol) Spiaf_0526 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Spiaf_0526 PWY-5484 glycolysis II (from fructose 6-phosphate) Spiaf_0526 PWY-5723 Rubisco shunt Spiaf_0526 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Spiaf_0526 PWY-6886 1-butanol autotrophic biosynthesis Spiaf_0526 PWY-6901 superpathway of glucose and xylose degradation Spiaf_0526 PWY-7003 glycerol degradation to butanol Spiaf_0526 PWY-7124 ethylene biosynthesis V (engineered) Spiaf_0526 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Spiaf_0588 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Spiaf_0588 PWY-6385 peptidoglycan biosynthesis III (mycobacteria) Spiaf_0588 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Spiaf_0588 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Spiaf_0594 PWY-2941 L-lysine biosynthesis II Spiaf_0594 PWY-2942 L-lysine biosynthesis III Spiaf_0594 PWY-5097 L-lysine biosynthesis VI Spiaf_0594 PWY-6559 spermidine biosynthesis II Spiaf_0594 PWY-6562 norspermidine biosynthesis Spiaf_0594 PWY-7153 grixazone biosynthesis Spiaf_0595 PWY-2941 L-lysine biosynthesis II Spiaf_0595 PWY-2942 L-lysine biosynthesis III Spiaf_0595 PWY-5097 L-lysine biosynthesis VI Spiaf_0595 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Spiaf_0595 PWY-6559 spermidine biosynthesis II Spiaf_0595 PWY-6562 norspermidine biosynthesis Spiaf_0595 PWY-7153 grixazone biosynthesis Spiaf_0595 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Spiaf_0617 PWY-5941 glycogen degradation II (eukaryotic) Spiaf_0617 PWY-6724 starch degradation II Spiaf_0617 PWY-6737 starch degradation V Spiaf_0617 PWY-7238 sucrose biosynthesis II Spiaf_0620 PWY-6788 cellulose degradation II (fungi) Spiaf_0622 PWY-1042 glycolysis IV (plant cytosol) Spiaf_0622 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Spiaf_0622 PWY-5484 glycolysis II (from fructose 6-phosphate) Spiaf_0622 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Spiaf_0622 PWY-7385 1,3-propanediol biosynthesis (engineered) Spiaf_0627 PWY-6857 retinol biosynthesis Spiaf_0649 PWY-40 putrescine biosynthesis I Spiaf_0649 PWY-43 putrescine biosynthesis II Spiaf_0649 PWY-6305 putrescine biosynthesis IV Spiaf_0649 PWY-6834 spermidine biosynthesis III Spiaf_0651 PWY-6562 norspermidine biosynthesis Spiaf_0670 PWY-1042 glycolysis IV (plant cytosol) Spiaf_0670 PWY-1622 formaldehyde assimilation I (serine pathway) Spiaf_0670 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Spiaf_0670 PWY-5484 glycolysis II (from fructose 6-phosphate) Spiaf_0670 PWY-5723 Rubisco shunt Spiaf_0670 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Spiaf_0670 PWY-6886 1-butanol autotrophic biosynthesis Spiaf_0670 PWY-6901 superpathway of glucose and xylose degradation Spiaf_0670 PWY-7003 glycerol degradation to butanol Spiaf_0670 PWY-7124 ethylene biosynthesis V (engineered) Spiaf_0670 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Spiaf_0676 PWY-5057 L-valine degradation II Spiaf_0676 PWY-5076 L-leucine degradation III Spiaf_0676 PWY-5078 L-isoleucine degradation II Spiaf_0676 PWY-5101 L-isoleucine biosynthesis II Spiaf_0676 PWY-5103 L-isoleucine biosynthesis III Spiaf_0676 PWY-5104 L-isoleucine biosynthesis IV Spiaf_0676 PWY-5108 L-isoleucine biosynthesis V Spiaf_0684 PWY-7077 N-acetyl-D-galactosamine degradation Spiaf_0684 PWY-7395 D-galactosamine and N-acetyl-D-galactosamine degradation Spiaf_0685 PWY-7310 D-glucosaminate degradation Spiaf_0688 PWY-5941 glycogen degradation II (eukaryotic) Spiaf_0688 PWY-6724 starch degradation II Spiaf_0688 PWY-6737 starch degradation V Spiaf_0688 PWY-7238 sucrose biosynthesis II Spiaf_0689 PWY-2622 trehalose biosynthesis IV Spiaf_0693 PWY-5941 glycogen degradation II (eukaryotic) Spiaf_0693 PWY-622 starch biosynthesis Spiaf_0693 PWY-6731 starch degradation III Spiaf_0693 PWY-6737 starch degradation V Spiaf_0693 PWY-7238 sucrose biosynthesis II Spiaf_0746 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Spiaf_0746 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Spiaf_0746 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Spiaf_0746 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Spiaf_0746 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Spiaf_0746 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Spiaf_0746 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Spiaf_0746 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Spiaf_0747 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Spiaf_0747 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Spiaf_0747 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Spiaf_0747 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Spiaf_0747 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Spiaf_0747 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Spiaf_0747 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Spiaf_0747 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Spiaf_0756 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Spiaf_0783 PWY-6938 NADH repair Spiaf_0787 PWY-622 starch biosynthesis Spiaf_0790 PWY-622 starch biosynthesis Spiaf_0824 PWY-1622 formaldehyde assimilation I (serine pathway) Spiaf_0824 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Spiaf_0824 PWY-5913 TCA cycle VI (obligate autotrophs) Spiaf_0824 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Spiaf_0824 PWY-6146 Methanobacterium thermoautotrophicum biosynthetic metabolism Spiaf_0824 PWY-6549 L-glutamine biosynthesis III Spiaf_0824 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Spiaf_0824 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Spiaf_0824 PWY-7124 ethylene biosynthesis V (engineered) Spiaf_0827 PWY-6168 flavin biosynthesis III (fungi) Spiaf_0827 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Spiaf_0830 PWY-6749 CMP-legionaminate biosynthesis I Spiaf_0893 PWY-842 starch degradation I Spiaf_0942 PWY-4041 γ-glutamyl cycle Spiaf_0942 PWY-5826 hypoglycin biosynthesis Spiaf_0943 PWY-4041 γ-glutamyl cycle Spiaf_0943 PWY-5826 hypoglycin biosynthesis Spiaf_0989 PWY-842 starch degradation I Spiaf_1036 PWY-6854 ethylene biosynthesis III (microbes) Spiaf_1037 PWY-6823 molybdenum cofactor biosynthesis Spiaf_1037 PWY-6891 thiazole biosynthesis II (Bacillus) Spiaf_1037 PWY-6892 thiazole biosynthesis I (E. coli) Spiaf_1037 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis Spiaf_1047 PWY-5667 CDP-diacylglycerol biosynthesis I Spiaf_1047 PWY-5981 CDP-diacylglycerol biosynthesis III Spiaf_1047 PWY-7411 superpathway of phosphatidate biosynthesis (yeast) Spiaf_1047 PWY-7417 phospholipid remodeling (phosphatidate, yeast) Spiaf_1048 PWY-6788 cellulose degradation II (fungi) Spiaf_1070 PWY-2781 cis-zeatin biosynthesis Spiaf_1072 PWY-6614 tetrahydrofolate biosynthesis Spiaf_1075 PWY-6012 acyl carrier protein metabolism I Spiaf_1075 PWY-6012-1 acyl carrier protein metabolism II (mammalian) Spiaf_1088 PWY-6123 inosine-5'-phosphate biosynthesis I Spiaf_1088 PWY-6124 inosine-5'-phosphate biosynthesis II Spiaf_1088 PWY-7234 inosine-5'-phosphate biosynthesis III Spiaf_1106 PWY-5381 pyridine nucleotide cycling (plants) Spiaf_1133 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation Spiaf_1137 PWY-4981 L-proline biosynthesis II (from arginine) Spiaf_1137 PWY-4984 urea cycle Spiaf_1137 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Spiaf_1162 PWY-5482 pyruvate fermentation to acetate II Spiaf_1162 PWY-5485 pyruvate fermentation to acetate IV Spiaf_1162 PWY-5497 purine nucleobases degradation II (anaerobic) Spiaf_1173 PWY-1042 glycolysis IV (plant cytosol) Spiaf_1173 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Spiaf_1173 PWY-5484 glycolysis II (from fructose 6-phosphate) Spiaf_1173 PWY-7385 1,3-propanediol biosynthesis (engineered) Spiaf_1178 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis Spiaf_1178 PWY-5957 L-nicotianamine biosynthesis Spiaf_1179 PWY-3861 mannitol degradation II Spiaf_1179 PWY-3881 mannitol biosynthesis Spiaf_1179 PWY-5659 GDP-mannose biosynthesis Spiaf_1179 PWY-7456 mannan degradation Spiaf_1179 PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) Spiaf_1187 PWY-4202 arsenate detoxification I (glutaredoxin) Spiaf_1187 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Spiaf_1187 PWY-6608 guanosine nucleotides degradation III Spiaf_1187 PWY-6609 adenine and adenosine salvage III Spiaf_1187 PWY-6611 adenine and adenosine salvage V Spiaf_1187 PWY-6620 guanine and guanosine salvage Spiaf_1187 PWY-6627 salinosporamide A biosynthesis Spiaf_1187 PWY-6644 fluoroacetate and fluorothreonine biosynthesis Spiaf_1187 PWY-7179 purine deoxyribonucleosides degradation I Spiaf_1187 PWY-7179-1 purine deoxyribonucleosides degradation Spiaf_1191 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation Spiaf_1192 PWY-6556 pyrimidine ribonucleosides salvage II Spiaf_1192 PWY-7181 pyrimidine deoxyribonucleosides degradation Spiaf_1192 PWY-7193 pyrimidine ribonucleosides salvage I Spiaf_1192 PWY-7199 pyrimidine deoxyribonucleosides salvage Spiaf_1193 PWY-4981 L-proline biosynthesis II (from arginine) Spiaf_1196 PWY-2721 trehalose degradation III Spiaf_1196 PWY-2722 trehalose degradation IV Spiaf_1196 PWY-6317 galactose degradation I (Leloir pathway) Spiaf_1196 PWY-7459 kojibiose degradation Spiaf_1199 PWY-381 nitrate reduction II (assimilatory) Spiaf_1199 PWY-5675 nitrate reduction V (assimilatory) Spiaf_1199 PWY-6549 L-glutamine biosynthesis III Spiaf_1199 PWY-6963 ammonia assimilation cycle I Spiaf_1199 PWY-6964 ammonia assimilation cycle II Spiaf_1215 PWY-6829 tRNA methylation (yeast) Spiaf_1215 PWY-7285 methylwyosine biosynthesis Spiaf_1215 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Spiaf_1226 PWY-5913 TCA cycle VI (obligate autotrophs) Spiaf_1226 PWY-6549 L-glutamine biosynthesis III Spiaf_1226 PWY-6728 methylaspartate cycle Spiaf_1226 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Spiaf_1226 PWY-7124 ethylene biosynthesis V (engineered) Spiaf_1226 PWY-7254 TCA cycle VII (acetate-producers) Spiaf_1226 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Spiaf_1264 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Spiaf_1264 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Spiaf_1264 PWY-6164 3-dehydroquinate biosynthesis I Spiaf_1271 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Spiaf_1272 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Spiaf_1272 PWY-6148 tetrahydromethanopterin biosynthesis Spiaf_1272 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Spiaf_1272 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Spiaf_1275 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Spiaf_1278 PWY-2723 trehalose degradation V Spiaf_1278 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Spiaf_1278 PWY-5661 GDP-glucose biosynthesis Spiaf_1278 PWY-7238 sucrose biosynthesis II Spiaf_1278 PWY-7385 1,3-propanediol biosynthesis (engineered) Spiaf_1283 PWY-621 sucrose degradation III (sucrose invertase) Spiaf_1300 PWY-5350 thiosulfate disproportionation III (rhodanese) Spiaf_1318 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Spiaf_1318 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Spiaf_1322 PWY-6167 flavin biosynthesis II (archaea) Spiaf_1322 PWY-6168 flavin biosynthesis III (fungi) Spiaf_1323 PWY-6167 flavin biosynthesis II (archaea) Spiaf_1323 PWY-6168 flavin biosynthesis III (fungi) Spiaf_1324 PWY-6167 flavin biosynthesis II (archaea) Spiaf_1324 PWY-6168 flavin biosynthesis III (fungi) Spiaf_1324 PWY-7219 adenosine ribonucleotides de novo biosynthesis Spiaf_1385 PWY-6654 phosphopantothenate biosynthesis III Spiaf_1416 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Spiaf_1416 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Spiaf_1421 PWY-2161 folate polyglutamylation Spiaf_1442 PWY-7181 pyrimidine deoxyribonucleosides degradation Spiaf_1465 PWY-6502 oxidized GTP and dGTP detoxification Spiaf_1488 PWY-6898 thiamin salvage III Spiaf_1488 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Spiaf_1488 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Spiaf_1492 PWY-3461 L-tyrosine biosynthesis II Spiaf_1492 PWY-3462 L-phenylalanine biosynthesis II Spiaf_1492 PWY-6120 L-tyrosine biosynthesis III Spiaf_1492 PWY-6627 salinosporamide A biosynthesis Spiaf_1516 PWY-7205 CMP phosphorylation Spiaf_1520 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Spiaf_1520 PWY-6148 tetrahydromethanopterin biosynthesis Spiaf_1520 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Spiaf_1520 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Spiaf_1526 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Spiaf_1526 PWY-5723 Rubisco shunt Spiaf_1531 PWY-6700 queuosine biosynthesis Spiaf_1534 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Spiaf_1534 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Spiaf_1534 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Spiaf_1534 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation Spiaf_1537 PWY-5523 5,6-dimethylbenzimidazole biosynthesis Spiaf_1537 PWY-6167 flavin biosynthesis II (archaea) Spiaf_1537 PWY-6168 flavin biosynthesis III (fungi) Spiaf_1548 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Spiaf_1548 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Spiaf_1548 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Spiaf_1548 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Spiaf_1548 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Spiaf_1548 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Spiaf_1550 PWY-6700 queuosine biosynthesis Spiaf_1607 PWY-6012 acyl carrier protein metabolism I Spiaf_1608 PWY-7221 guanosine ribonucleotides de novo biosynthesis Spiaf_1609 PWY-7219 adenosine ribonucleotides de novo biosynthesis Spiaf_1610 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Spiaf_1610 PWY-6596 adenosine nucleotides degradation I Spiaf_1610 PWY-7221 guanosine ribonucleotides de novo biosynthesis Spiaf_1616 PWY-6123 inosine-5'-phosphate biosynthesis I Spiaf_1616 PWY-6124 inosine-5'-phosphate biosynthesis II Spiaf_1616 PWY-7234 inosine-5'-phosphate biosynthesis III Spiaf_1617 PWY-6123 inosine-5'-phosphate biosynthesis I Spiaf_1617 PWY-6124 inosine-5'-phosphate biosynthesis II Spiaf_1617 PWY-7234 inosine-5'-phosphate biosynthesis III Spiaf_1618 PWY-5663 tetrahydrobiopterin biosynthesis I Spiaf_1618 PWY-5664 tetrahydrobiopterin biosynthesis II Spiaf_1618 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Spiaf_1618 PWY-6703 preQ0 biosynthesis Spiaf_1618 PWY-6983 tetrahydrobiopterin biosynthesis III Spiaf_1618 PWY-7442 drosopterin and aurodrosopterin biosynthesis Spiaf_1619 PWY-1722 formate reduction to 5,10-methylenetetrahydrofolate Spiaf_1619 PWY-2201 folate transformations I Spiaf_1619 PWY-3841 folate transformations II Spiaf_1619 PWY-5030 L-histidine degradation III Spiaf_1619 PWY-5497 purine nucleobases degradation II (anaerobic) Spiaf_1619 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate Spiaf_1631 PWY-1042 glycolysis IV (plant cytosol) Spiaf_1631 PWY-5484 glycolysis II (from fructose 6-phosphate) Spiaf_1631 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Spiaf_1631 PWY-7003 glycerol degradation to butanol Spiaf_1632 PWY-1042 glycolysis IV (plant cytosol) Spiaf_1632 PWY-5484 glycolysis II (from fructose 6-phosphate) Spiaf_1632 PWY-6886 1-butanol autotrophic biosynthesis Spiaf_1632 PWY-6901 superpathway of glucose and xylose degradation Spiaf_1632 PWY-7003 glycerol degradation to butanol Spiaf_1633 PWY-1042 glycolysis IV (plant cytosol) Spiaf_1633 PWY-5484 glycolysis II (from fructose 6-phosphate) Spiaf_1633 PWY-6901 superpathway of glucose and xylose degradation Spiaf_1633 PWY-7003 glycerol degradation to butanol Spiaf_1644 PWY-7219 adenosine ribonucleotides de novo biosynthesis Spiaf_1645 PWY-7219 adenosine ribonucleotides de novo biosynthesis Spiaf_1652 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Spiaf_1652 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Spiaf_1663 PWY-5101 L-isoleucine biosynthesis II Spiaf_1663 PWY-5103 L-isoleucine biosynthesis III Spiaf_1663 PWY-5104 L-isoleucine biosynthesis IV Spiaf_1663 PWY-5938 (R)-acetoin biosynthesis I Spiaf_1663 PWY-5939 (R)-acetoin biosynthesis II Spiaf_1663 PWY-6389 (S)-acetoin biosynthesis Spiaf_1663 PWY-7111 pyruvate fermentation to isobutanol (engineered) Spiaf_1664 PWY-5101 L-isoleucine biosynthesis II Spiaf_1664 PWY-5103 L-isoleucine biosynthesis III Spiaf_1664 PWY-5104 L-isoleucine biosynthesis IV Spiaf_1664 PWY-5938 (R)-acetoin biosynthesis I Spiaf_1664 PWY-5939 (R)-acetoin biosynthesis II Spiaf_1664 PWY-6389 (S)-acetoin biosynthesis Spiaf_1664 PWY-7111 pyruvate fermentation to isobutanol (engineered) Spiaf_1665 PWY-5101 L-isoleucine biosynthesis II Spiaf_1665 PWY-5103 L-isoleucine biosynthesis III Spiaf_1665 PWY-5104 L-isoleucine biosynthesis IV Spiaf_1665 PWY-7111 pyruvate fermentation to isobutanol (engineered) Spiaf_1677 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Spiaf_1677 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Spiaf_1716 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Spiaf_1716 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Spiaf_1724 PWY-5097 L-lysine biosynthesis VI Spiaf_1730 PWY-6749 CMP-legionaminate biosynthesis I Spiaf_1743 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Spiaf_1743 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Spiaf_1743 PWY-7382 lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast) Spiaf_1796 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) Spiaf_1800 PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA Spiaf_1800 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA Spiaf_1804 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) Spiaf_1804 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Spiaf_1812 PWY-5392 reductive TCA cycle II Spiaf_1812 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Spiaf_1812 PWY-5690 TCA cycle II (plants and fungi) Spiaf_1812 PWY-5913 TCA cycle VI (obligate autotrophs) Spiaf_1812 PWY-6728 methylaspartate cycle Spiaf_1812 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Spiaf_1812 PWY-7254 TCA cycle VII (acetate-producers) Spiaf_1812 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Spiaf_1814 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Spiaf_1828 PWY-3341 L-proline biosynthesis III Spiaf_1828 PWY-4981 L-proline biosynthesis II (from arginine) Spiaf_1828 PWY-6344 L-ornithine degradation II (Stickland reaction) Spiaf_1848 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Spiaf_1848 PWY-5686 UMP biosynthesis Spiaf_1848 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Spiaf_1852 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Spiaf_1852 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation Spiaf_1852 PWY-7242 D-fructuronate degradation Spiaf_1852 PWY-7310 D-glucosaminate degradation Spiaf_1881 PWY-5381 pyridine nucleotide cycling (plants) Spiaf_1881 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde Spiaf_1894 PWY-5101 L-isoleucine biosynthesis II Spiaf_1894 PWY-6871 3-methylbutanol biosynthesis Spiaf_1895 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Spiaf_1895 PWY-5686 UMP biosynthesis Spiaf_1895 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Spiaf_1896 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Spiaf_1896 PWY-5686 UMP biosynthesis Spiaf_1896 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Spiaf_1898 PWY-6605 adenine and adenosine salvage II Spiaf_1898 PWY-6610 adenine and adenosine salvage IV Spiaf_1916 PWY-5686 UMP biosynthesis Spiaf_1924 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Spiaf_1933 PWY-5381 pyridine nucleotide cycling (plants) Spiaf_1933 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Spiaf_1933 PWY-6596 adenosine nucleotides degradation I Spiaf_1933 PWY-6606 guanosine nucleotides degradation II Spiaf_1933 PWY-6607 guanosine nucleotides degradation I Spiaf_1933 PWY-6608 guanosine nucleotides degradation III Spiaf_1933 PWY-7185 UTP and CTP dephosphorylation I Spiaf_1934 PWY-3821 galactose degradation III Spiaf_1934 PWY-6317 galactose degradation I (Leloir pathway) Spiaf_1934 PWY-6527 stachyose degradation Spiaf_1937 PWY-7219 adenosine ribonucleotides de novo biosynthesis Spiaf_1953 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Spiaf_1953 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Spiaf_1953 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Spiaf_1953 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Spiaf_1954 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Spiaf_1954 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Spiaf_1954 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Spiaf_1956 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Spiaf_1956 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Spiaf_1956 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Spiaf_2001 PWY-1042 glycolysis IV (plant cytosol) Spiaf_2001 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Spiaf_2001 PWY-5484 glycolysis II (from fructose 6-phosphate) Spiaf_2001 PWY-5723 Rubisco shunt Spiaf_2001 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Spiaf_2001 PWY-6886 1-butanol autotrophic biosynthesis Spiaf_2001 PWY-6901 superpathway of glucose and xylose degradation Spiaf_2001 PWY-7003 glycerol degradation to butanol Spiaf_2001 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Spiaf_2001 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Spiaf_2005 PWY-4261 glycerol degradation I Spiaf_2010 PWY-4983 L-citrulline-nitric oxide cycle Spiaf_2010 PWY-4984 urea cycle Spiaf_2010 PWY-5 canavanine biosynthesis Spiaf_2010 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Spiaf_2010 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Spiaf_2013 PWY-5350 thiosulfate disproportionation III (rhodanese) Spiaf_2024 PWY-5958 acridone alkaloid biosynthesis Spiaf_2024 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Spiaf_2024 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Spiaf_2028 PWY-6164 3-dehydroquinate biosynthesis I Spiaf_2044 PWY-5344 L-homocysteine biosynthesis Spiaf_2044 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Spiaf_2045 PWY-6936 seleno-amino acid biosynthesis Spiaf_2052 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Spiaf_2052 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Spiaf_2052 PWY-6164 3-dehydroquinate biosynthesis I Spiaf_2053 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Spiaf_2062 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Spiaf_2068 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Spiaf_2068 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Spiaf_2068 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Spiaf_2068 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Spiaf_2102 PWY-7219 adenosine ribonucleotides de novo biosynthesis Spiaf_2120 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Spiaf_2120 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Spiaf_2120 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Spiaf_2121 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Spiaf_2121 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Spiaf_2125 PWY-5067 glycogen biosynthesis II (from UDP-D-Glucose) Spiaf_2125 PWY-622 starch biosynthesis Spiaf_2131 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Spiaf_2131 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Spiaf_2131 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Spiaf_2137 PWY-6825 phosphatidylcholine biosynthesis V Spiaf_2149 PWY-7219 adenosine ribonucleotides de novo biosynthesis Spiaf_2170 PWY-3121 linamarin degradation Spiaf_2170 PWY-5176 coumarin biosynthesis (via 2-coumarate) Spiaf_2170 PWY-6002 lotaustralin degradation Spiaf_2170 PWY-6788 cellulose degradation II (fungi) Spiaf_2170 PWY-7089 taxiphyllin bioactivation Spiaf_2170 PWY-7091 linustatin bioactivation Spiaf_2170 PWY-7092 neolinustatin bioactivation Spiaf_2186 PWY-2201 folate transformations I Spiaf_2186 PWY-3841 folate transformations II Spiaf_2196 PWY-5530 sorbitol biosynthesis II Spiaf_2196 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Spiaf_2202 PWY-7303 3-dimethylallyl-4-hydroxybenzoate biosynthesis Spiaf_2203 PWY-1281 sulfoacetaldehyde degradation I Spiaf_2203 PWY-5482 pyruvate fermentation to acetate II Spiaf_2203 PWY-5485 pyruvate fermentation to acetate IV Spiaf_2203 PWY-5497 purine nucleobases degradation II (anaerobic) Spiaf_2203 PWY-6637 sulfolactate degradation II Spiaf_2204 PWY-2941 L-lysine biosynthesis II Spiaf_2204 PWY-2942 L-lysine biosynthesis III Spiaf_2204 PWY-5097 L-lysine biosynthesis VI Spiaf_2205 PWY-2941 L-lysine biosynthesis II Spiaf_2205 PWY-2942 L-lysine biosynthesis III Spiaf_2205 PWY-5097 L-lysine biosynthesis VI Spiaf_2211 PWY-4381 fatty acid biosynthesis initiation I Spiaf_2211 PWY-5743 3-hydroxypropanoate cycle Spiaf_2211 PWY-5744 glyoxylate assimilation Spiaf_2211 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Spiaf_2211 PWY-6679 jadomycin biosynthesis Spiaf_2211 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Spiaf_2212 PWY-4381 fatty acid biosynthesis initiation I Spiaf_2212 PWY-5743 3-hydroxypropanoate cycle Spiaf_2212 PWY-5744 glyoxylate assimilation Spiaf_2212 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Spiaf_2212 PWY-6679 jadomycin biosynthesis Spiaf_2212 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Spiaf_2215 PWY-5971 palmitate biosynthesis II (bacteria and plants) Spiaf_2215 PWY-5973 cis-vaccenate biosynthesis Spiaf_2215 PWY-5989 stearate biosynthesis II (bacteria and plants) Spiaf_2215 PWY-5994 palmitate biosynthesis I (animals and fungi) Spiaf_2215 PWY-6113 superpathway of mycolate biosynthesis Spiaf_2215 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Spiaf_2215 PWY-6519 8-amino-7-oxononanoate biosynthesis I Spiaf_2215 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Spiaf_2215 PWYG-321 mycolate biosynthesis Spiaf_2269 PWY-842 starch degradation I Spiaf_2283 PWY-4381 fatty acid biosynthesis initiation I Spiaf_2284 PWY-5971 palmitate biosynthesis II (bacteria and plants) Spiaf_2284 PWY-5973 cis-vaccenate biosynthesis Spiaf_2284 PWY-5989 stearate biosynthesis II (bacteria and plants) Spiaf_2284 PWY-5994 palmitate biosynthesis I (animals and fungi) Spiaf_2284 PWY-6113 superpathway of mycolate biosynthesis Spiaf_2284 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Spiaf_2284 PWY-6519 8-amino-7-oxononanoate biosynthesis I Spiaf_2284 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Spiaf_2284 PWYG-321 mycolate biosynthesis Spiaf_2285 PWY-5971 palmitate biosynthesis II (bacteria and plants) Spiaf_2285 PWY-5973 cis-vaccenate biosynthesis Spiaf_2285 PWY-5989 stearate biosynthesis II (bacteria and plants) Spiaf_2285 PWY-5994 palmitate biosynthesis I (animals and fungi) Spiaf_2285 PWY-6113 superpathway of mycolate biosynthesis Spiaf_2285 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Spiaf_2285 PWY-6519 8-amino-7-oxononanoate biosynthesis I Spiaf_2285 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Spiaf_2285 PWYG-321 mycolate biosynthesis Spiaf_2289 PWY-6012 acyl carrier protein metabolism I Spiaf_2289 PWY-6012-1 acyl carrier protein metabolism II (mammalian) Spiaf_2290 PWY-5041 S-adenosyl-L-methionine cycle II Spiaf_2290 PWY-6151 S-adenosyl-L-methionine cycle I Spiaf_2290 PWY-6936 seleno-amino acid biosynthesis Spiaf_2290 PWY-702 L-methionine biosynthesis II Spiaf_2292 PWY-5481 pyruvate fermentation to lactate Spiaf_2292 PWY-6901 superpathway of glucose and xylose degradation Spiaf_2303 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Spiaf_2303 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Spiaf_2303 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Spiaf_2347 PWY-6784 cellulose and hemicellulose degradation (cellulolosome) Spiaf_2357 PWY-842 starch degradation I Spiaf_2381 PWY-5101 L-isoleucine biosynthesis II Spiaf_2381 PWY-5103 L-isoleucine biosynthesis III Spiaf_2381 PWY-5104 L-isoleucine biosynthesis IV Spiaf_2381 PWY-7111 pyruvate fermentation to isobutanol (engineered) Spiaf_2392 PWY-6807 xyloglucan degradation II (exoglucanase) Spiaf_2394 PWY-3821 galactose degradation III Spiaf_2394 PWY-6317 galactose degradation I (Leloir pathway) Spiaf_2394 PWY-6397 mycolyl-arabinogalactan-peptidoglycan complex biosynthesis Spiaf_2394 PWY-6527 stachyose degradation Spiaf_2394 PWY-7328 superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis Spiaf_2394 PWY-7344 UDP-D-galactose biosynthesis Spiaf_2395 PWY-3821 galactose degradation III Spiaf_2395 PWY-6317 galactose degradation I (Leloir pathway) Spiaf_2395 PWY-6527 stachyose degradation Spiaf_2397 PWY-6871 3-methylbutanol biosynthesis Spiaf_2400 PWY-1281 sulfoacetaldehyde degradation I Spiaf_2400 PWY-5482 pyruvate fermentation to acetate II Spiaf_2400 PWY-5485 pyruvate fermentation to acetate IV Spiaf_2400 PWY-5497 purine nucleobases degradation II (anaerobic) Spiaf_2400 PWY-6637 sulfolactate degradation II Spiaf_2402 PWY-1281 sulfoacetaldehyde degradation I Spiaf_2402 PWY-5482 pyruvate fermentation to acetate II Spiaf_2402 PWY-5485 pyruvate fermentation to acetate IV Spiaf_2402 PWY-5497 purine nucleobases degradation II (anaerobic) Spiaf_2402 PWY-6637 sulfolactate degradation II Spiaf_2417 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Spiaf_2417 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Spiaf_2417 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Spiaf_2417 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Spiaf_2417 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Spiaf_2417 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Spiaf_2417 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Spiaf_2417 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Spiaf_2421 PWY-5480 pyruvate fermentation to ethanol I Spiaf_2421 PWY-5485 pyruvate fermentation to acetate IV Spiaf_2421 PWY-5493 reductive monocarboxylic acid cycle Spiaf_2426 PWY-7205 CMP phosphorylation Spiaf_2428 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Spiaf_2428 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Spiaf_2436 PWY-1042 glycolysis IV (plant cytosol) Spiaf_2436 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Spiaf_2436 PWY-5484 glycolysis II (from fructose 6-phosphate) Spiaf_2436 PWY-7385 1,3-propanediol biosynthesis (engineered) Spiaf_2449 PWY-6936 seleno-amino acid biosynthesis Spiaf_2451 PWY-3162 L-tryptophan degradation V (side chain pathway) Spiaf_2451 PWY-5057 L-valine degradation II Spiaf_2451 PWY-5076 L-leucine degradation III Spiaf_2451 PWY-5078 L-isoleucine degradation II Spiaf_2451 PWY-5079 L-phenylalanine degradation III Spiaf_2451 PWY-5082 L-methionine degradation III Spiaf_2451 PWY-5162 2-oxopentenoate degradation Spiaf_2451 PWY-5436 L-threonine degradation IV Spiaf_2451 PWY-5480 pyruvate fermentation to ethanol I Spiaf_2451 PWY-5486 pyruvate fermentation to ethanol II Spiaf_2451 PWY-5751 phenylethanol biosynthesis Spiaf_2451 PWY-6028 acetoin degradation Spiaf_2451 PWY-6313 serotonin degradation Spiaf_2451 PWY-6333 acetaldehyde biosynthesis I Spiaf_2451 PWY-6342 noradrenaline and adrenaline degradation Spiaf_2451 PWY-6587 pyruvate fermentation to ethanol III Spiaf_2451 PWY-6802 salidroside biosynthesis Spiaf_2451 PWY-6871 3-methylbutanol biosynthesis Spiaf_2451 PWY-7013 L-1,2-propanediol degradation Spiaf_2451 PWY-7085 triethylamine degradation Spiaf_2451 PWY-7111 pyruvate fermentation to isobutanol (engineered) Spiaf_2451 PWY-7118 chitin degradation to ethanol Spiaf_2451 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation Spiaf_2451 PWY-7396 butanol and isobutanol biosynthesis (engineered) Spiaf_2451 PWY-7557 dehydrodiconiferyl alcohol degradation Spiaf_2484 PWY-1622 formaldehyde assimilation I (serine pathway) Spiaf_2484 PWY-181 photorespiration Spiaf_2484 PWY-2161 folate polyglutamylation Spiaf_2484 PWY-2201 folate transformations I Spiaf_2484 PWY-3661 glycine betaine degradation I Spiaf_2484 PWY-3661-1 glycine betaine degradation II (mammalian) Spiaf_2484 PWY-3841 folate transformations II Spiaf_2484 PWY-5497 purine nucleobases degradation II (anaerobic) Spiaf_2490 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Spiaf_2490 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Spiaf_2497 PWY-5482 pyruvate fermentation to acetate II Spiaf_2497 PWY-5485 pyruvate fermentation to acetate IV Spiaf_2497 PWY-5497 purine nucleobases degradation II (anaerobic) Spiaf_2502 PWY-4381 fatty acid biosynthesis initiation I Spiaf_2522 PWY-842 starch degradation I Spiaf_2538 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Spiaf_2543 PWY-6749 CMP-legionaminate biosynthesis I Spiaf_2550 PWY-5958 acridone alkaloid biosynthesis Spiaf_2550 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Spiaf_2550 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Spiaf_2551 PWY-5958 acridone alkaloid biosynthesis Spiaf_2551 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Spiaf_2551 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Spiaf_2561 PWY-6151 S-adenosyl-L-methionine cycle I Spiaf_2561 PWY-6153 autoinducer AI-2 biosynthesis I Spiaf_2561 PWY-6154 autoinducer AI-2 biosynthesis II (Vibrio) Spiaf_2562 PWY-6936 seleno-amino acid biosynthesis Spiaf_2567 PWY-5686 UMP biosynthesis Spiaf_2598 PWY-5269 cardiolipin biosynthesis II Spiaf_2598 PWY-5668 cardiolipin biosynthesis I Spiaf_2615 PWY-5350 thiosulfate disproportionation III (rhodanese) Spiaf_2628 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Spiaf_2643 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Spiaf_2643 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Spiaf_2643 PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) Spiaf_2675 PWY-7176 UTP and CTP de novo biosynthesis Spiaf_2675 PWY-7177 UTP and CTP dephosphorylation II Spiaf_2675 PWY-7185 UTP and CTP dephosphorylation I Spiaf_2725 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Spiaf_2725 PWY-6416 quinate degradation II Spiaf_2725 PWY-6707 gallate biosynthesis Spiaf_2746 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Spiaf_2750 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Spiaf_2750 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Spiaf_2750 PWY-6268 adenosylcobalamin salvage from cobalamin Spiaf_2750 PWY-6269 adenosylcobalamin salvage from cobinamide II Spiaf_2756 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Spiaf_2756 PWY-5723 Rubisco shunt Spiaf_2756 PWY-6891 thiazole biosynthesis II (Bacillus) Spiaf_2756 PWY-6892 thiazole biosynthesis I (E. coli) Spiaf_2756 PWY-6901 superpathway of glucose and xylose degradation Spiaf_2756 PWY-7560 methylerythritol phosphate pathway II Spiaf_2757 PWY-7396 butanol and isobutanol biosynthesis (engineered) Spiaf_2759 PWY-5686 UMP biosynthesis Spiaf_2764 PWY-2941 L-lysine biosynthesis II Spiaf_2764 PWY-2942 L-lysine biosynthesis III Spiaf_2764 PWY-5097 L-lysine biosynthesis VI Spiaf_2764 PWY-6559 spermidine biosynthesis II Spiaf_2764 PWY-6562 norspermidine biosynthesis Spiaf_2764 PWY-7153 grixazone biosynthesis Spiaf_2765 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Spiaf_2765 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Spiaf_2791 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Spiaf_2791 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Spiaf_2792 PWY-5941 glycogen degradation II (eukaryotic) Spiaf_2792 PWY-6724 starch degradation II Spiaf_2792 PWY-6737 starch degradation V Spiaf_2792 PWY-7238 sucrose biosynthesis II Spiaf_2813 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Spiaf_2825 PWY-101 photosynthesis light reactions Spiaf_2825 PWY-7230 ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic) Spiaf_2827 PWY-5155 β-alanine biosynthesis III Spiaf_2828 PWY-3961 phosphopantothenate biosynthesis II Spiaf_2830 PWY-6654 phosphopantothenate biosynthesis III Spiaf_2832 PWY-5316 nicotine biosynthesis Spiaf_2832 PWY-7342 superpathway of nicotine biosynthesis Spiaf_2833 PWY-5316 nicotine biosynthesis Spiaf_2833 PWY-5381 pyridine nucleotide cycling (plants) Spiaf_2833 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde Spiaf_2833 PWY-7342 superpathway of nicotine biosynthesis Spiaf_2837 PWY-6409 pyoverdine I biosynthesis Spiaf_2837 PWY-6562 norspermidine biosynthesis Spiaf_2837 PWY-761 rhizobactin 1021 biosynthesis Spiaf_2852 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Spiaf_2857 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Spiaf_2858 PWY-6984 lipoate salvage II Spiaf_2858 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Spiaf_2858 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast)