Smal_0020	PWY-5484	glycolysis II (from fructose 6-phosphate)
Smal_0021	PWY-5913	TCA cycle VI (obligate autotrophs)
Smal_0021	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Smal_0021	PWY-6638	sulfolactate degradation III
Smal_0021	PWY-6642	(<i>R</i>)-cysteate degradation
Smal_0021	PWY-6643	coenzyme M biosynthesis II
Smal_0021	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Smal_0021	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Smal_0021	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Smal_0029	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Smal_0029	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Smal_0029	PWY-7242	D-fructuronate degradation
Smal_0029	PWY-7310	D-glucosaminate degradation
Smal_0030	PWY-5331	taurine biosynthesis
Smal_0032	PWY-6134	L-tyrosine biosynthesis IV
Smal_0032	PWY-7158	L-phenylalanine degradation V
Smal_0038	PWY-6348	phosphate acquisition
Smal_0038	PWY-6357	phosphate utilization in cell wall regeneration
Smal_0038	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Smal_0038	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Smal_0047	PWY-7199	pyrimidine deoxyribonucleosides salvage
Smal_0054	PWY-5686	UMP biosynthesis
Smal_0056	PWY-5667	CDP-diacylglycerol biosynthesis I
Smal_0056	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
Smal_0109	PWY-381	nitrate reduction II (assimilatory)
Smal_0109	PWY-5675	nitrate reduction V (assimilatory)
Smal_0109	PWY-6549	L-glutamine biosynthesis III
Smal_0109	PWY-6963	ammonia assimilation cycle I
Smal_0109	PWY-6964	ammonia assimilation cycle II
Smal_0124	PWY-6854	ethylene biosynthesis III (microbes)
Smal_0125	PWY-6854	ethylene biosynthesis III (microbes)
Smal_0131	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Smal_0131	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Smal_0136	PWY-5667	CDP-diacylglycerol biosynthesis I
Smal_0136	PWY-5981	CDP-diacylglycerol biosynthesis III
Smal_0167	PWY-4381	fatty acid biosynthesis initiation I
Smal_0173	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Smal_0173	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Smal_0182	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Smal_0182	PWY-6416	quinate degradation II
Smal_0182	PWY-6707	gallate biosynthesis
Smal_0188	PWY-6728	methylaspartate cycle
Smal_0188	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Smal_0188	PWY-7118	chitin degradation to ethanol
Smal_0188	PWY-7294	xylose degradation IV
Smal_0188	PWY-7295	L-arabinose degradation IV
Smal_0189	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Smal_0197	PWY-4381	fatty acid biosynthesis initiation I
Smal_0197	PWY-5743	3-hydroxypropanoate cycle
Smal_0197	PWY-5744	glyoxylate assimilation
Smal_0197	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Smal_0197	PWY-6679	jadomycin biosynthesis
Smal_0197	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Smal_0206	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Smal_0206	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Smal_0206	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Smal_0206	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Smal_0206	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Smal_0206	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Smal_0206	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Smal_0206	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Smal_0207	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Smal_0207	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Smal_0207	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Smal_0207	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Smal_0207	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Smal_0207	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Smal_0207	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Smal_0207	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Smal_0213	PWY-2201	folate transformations I
Smal_0213	PWY-5497	purine nucleobases degradation II (anaerobic)
Smal_0219	PWY-5642	2,4-dinitrotoluene degradation
Smal_0219	PWY-6373	acrylate degradation
Smal_0233	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Smal_0233	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Smal_0234	PWY-3961	phosphopantothenate biosynthesis II
Smal_0238	PWY-31	canavanine degradation
Smal_0238	PWY-4984	urea cycle
Smal_0238	PWY-6305	putrescine biosynthesis IV
Smal_0238	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Smal_0260	PWY-5506	methanol oxidation to formaldehyde IV
Smal_0261	PWY-5988	wound-induced proteolysis I
Smal_0261	PWY-6018	seed germination protein turnover
Smal_0285	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Smal_0285	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Smal_0285	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Smal_0285	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Smal_0286	PWY-6749	CMP-legionaminate biosynthesis I
Smal_0294	PWY-5686	UMP biosynthesis
Smal_0308	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Smal_0308	PWY-6853	ethylene biosynthesis II (microbes)
Smal_0308	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Smal_0311	PWY-3781	aerobic respiration I (cytochrome c)
Smal_0311	PWY-4521	arsenite oxidation I (respiratory)
Smal_0311	PWY-6692	Fe(II) oxidation
Smal_0311	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Smal_0329	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Smal_0329	PWY-6148	tetrahydromethanopterin biosynthesis
Smal_0329	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Smal_0329	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Smal_0344	PWY-6454	vancomycin resistance I
Smal_0344	PWY-6455	vancomycin resistance II
Smal_0365	PWY-6891	thiazole biosynthesis II (Bacillus)
Smal_0365	PWY-6892	thiazole biosynthesis I (E. coli)
Smal_0365	PWY-7560	methylerythritol phosphate pathway II
Smal_0445	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Smal_0454	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Smal_0454	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Smal_0454	PWY-5989	stearate biosynthesis II (bacteria and plants)
Smal_0454	PWY-5994	palmitate biosynthesis I (animals and fungi)
Smal_0454	PWY-6113	superpathway of mycolate biosynthesis
Smal_0454	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Smal_0454	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Smal_0454	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Smal_0454	PWYG-321	mycolate biosynthesis
Smal_0460	PWY-181	photorespiration
Smal_0465	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Smal_0495	PWY-3821	galactose degradation III
Smal_0495	PWY-6317	galactose degradation I (Leloir pathway)
Smal_0495	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Smal_0495	PWY-6527	stachyose degradation
Smal_0495	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Smal_0495	PWY-7344	UDP-D-galactose biosynthesis
Smal_0499	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Smal_0499	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Smal_0503	PWY-3221	dTDP-L-rhamnose biosynthesis II
Smal_0503	PWY-6808	dTDP-D-forosamine biosynthesis
Smal_0503	PWY-6942	dTDP-D-desosamine biosynthesis
Smal_0503	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Smal_0503	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Smal_0503	PWY-6974	dTDP-L-olivose biosynthesis
Smal_0503	PWY-6976	dTDP-L-mycarose biosynthesis
Smal_0503	PWY-7104	dTDP-L-megosamine biosynthesis
Smal_0503	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Smal_0503	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Smal_0503	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Smal_0503	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Smal_0503	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Smal_0503	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Smal_0503	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Smal_0503	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Smal_0504	PWY-3221	dTDP-L-rhamnose biosynthesis II
Smal_0504	PWY-6808	dTDP-D-forosamine biosynthesis
Smal_0504	PWY-6942	dTDP-D-desosamine biosynthesis
Smal_0504	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Smal_0504	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Smal_0504	PWY-6974	dTDP-L-olivose biosynthesis
Smal_0504	PWY-6976	dTDP-L-mycarose biosynthesis
Smal_0504	PWY-7104	dTDP-L-megosamine biosynthesis
Smal_0504	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Smal_0504	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Smal_0504	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Smal_0504	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Smal_0504	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Smal_0504	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Smal_0504	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Smal_0504	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Smal_0507	PWY-6749	CMP-legionaminate biosynthesis I
Smal_0508	PWY-5659	GDP-mannose biosynthesis
Smal_0508	PWY-6073	alginate biosynthesis I (algal)
Smal_0508	PWY-6082	alginate biosynthesis II (bacterial)
Smal_0508	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Smal_0509	PWY-6749	CMP-legionaminate biosynthesis I
Smal_0529	PWY-5669	phosphatidylethanolamine biosynthesis I
Smal_0536	PWY-5988	wound-induced proteolysis I
Smal_0536	PWY-6018	seed germination protein turnover
Smal_0542	PWY-6902	chitin degradation II
Smal_0543	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Smal_0543	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Smal_0543	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Smal_0559	PWY-5381	pyridine nucleotide cycling (plants)
Smal_0565	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Smal_0573	PWY-1622	formaldehyde assimilation I (serine pathway)
Smal_0573	PWY-181	photorespiration
Smal_0573	PWY-2161	folate polyglutamylation
Smal_0573	PWY-2201	folate transformations I
Smal_0573	PWY-3661	glycine betaine degradation I
Smal_0573	PWY-3661-1	glycine betaine degradation II (mammalian)
Smal_0573	PWY-3841	folate transformations II
Smal_0573	PWY-5497	purine nucleobases degradation II (anaerobic)
Smal_0581	PWY-6167	flavin biosynthesis II (archaea)
Smal_0581	PWY-6168	flavin biosynthesis III (fungi)
Smal_0581	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Smal_0582	PWY-6167	flavin biosynthesis II (archaea)
Smal_0582	PWY-6168	flavin biosynthesis III (fungi)
Smal_0582	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Smal_0583	PWY-6167	flavin biosynthesis II (archaea)
Smal_0583	PWY-6168	flavin biosynthesis III (fungi)
Smal_0585	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Smal_0585	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Smal_0585	PWY-6896	thiamin salvage I
Smal_0585	PWY-6897	thiamin salvage II
Smal_0587	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Smal_0587	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Smal_0599	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Smal_0599	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Smal_0600	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Smal_0600	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Smal_0600	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Smal_0602	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Smal_0602	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Smal_0602	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Smal_0602	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Smal_0603	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Smal_0603	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Smal_0604	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Smal_0604	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Smal_0612	PWY-6502	oxidized GTP and dGTP detoxification
Smal_0612	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Smal_0612	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Smal_0612	PWY-6897	thiamin salvage II
Smal_0612	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Smal_0612	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Smal_0612	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Smal_0612	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Smal_0614	PWY-2201	folate transformations I
Smal_0614	PWY-3841	folate transformations II
Smal_0626	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Smal_0628	PWY-1622	formaldehyde assimilation I (serine pathway)
Smal_0628	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Smal_0628	PWY-5913	TCA cycle VI (obligate autotrophs)
Smal_0628	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Smal_0628	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Smal_0628	PWY-6549	L-glutamine biosynthesis III
Smal_0628	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Smal_0628	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Smal_0628	PWY-7124	ethylene biosynthesis V (engineered)
Smal_0630	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Smal_0630	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Smal_0655	PWY-7039	phosphatidate metabolism, as a signaling molecule
Smal_0662	PWY-3841	folate transformations II
Smal_0662	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Smal_0662	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Smal_0662	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Smal_0662	PWY-7199	pyrimidine deoxyribonucleosides salvage
Smal_0662	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Smal_0664	PWY-3841	folate transformations II
Smal_0664	PWY-6614	tetrahydrofolate biosynthesis
Smal_0673	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Smal_0673	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Smal_0673	PWY-6268	adenosylcobalamin salvage from cobalamin
Smal_0673	PWY-6269	adenosylcobalamin salvage from cobinamide II
Smal_0682	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Smal_0685	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Smal_0685	PWY-5723	Rubisco shunt
Smal_0708	PWY-5057	L-valine degradation II
Smal_0708	PWY-5076	L-leucine degradation III
Smal_0708	PWY-5078	L-isoleucine degradation II
Smal_0708	PWY-5101	L-isoleucine biosynthesis II
Smal_0708	PWY-5103	L-isoleucine biosynthesis III
Smal_0708	PWY-5104	L-isoleucine biosynthesis IV
Smal_0708	PWY-5108	L-isoleucine biosynthesis V
Smal_0715	PWY-6785	hydrogen production VIII
Smal_0722	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Smal_0725	PWY-7560	methylerythritol phosphate pathway II
Smal_0784	PWY-6164	3-dehydroquinate biosynthesis I
Smal_0786	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Smal_0790	PWY-1622	formaldehyde assimilation I (serine pathway)
Smal_0790	PWY-5392	reductive TCA cycle II
Smal_0790	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Smal_0790	PWY-5690	TCA cycle II (plants and fungi)
Smal_0790	PWY-5913	TCA cycle VI (obligate autotrophs)
Smal_0790	PWY-6728	methylaspartate cycle
Smal_0790	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Smal_0790	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Smal_0790	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Smal_0792	PWY-3941	&beta;-alanine biosynthesis II
Smal_0792	PWY-5104	L-isoleucine biosynthesis IV
Smal_0792	PWY-5747	2-methylcitrate cycle II
Smal_0806	PWY-7378	aminopropanol phosphate biosynthesis II
Smal_0809	PWY-2161	folate polyglutamylation
Smal_0812	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Smal_0812	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Smal_0812	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Smal_0812	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Smal_0842	PWY-5386	methylglyoxal degradation I
Smal_0869	PWY-4381	fatty acid biosynthesis initiation I
Smal_0871	PWY-4381	fatty acid biosynthesis initiation I
Smal_0871	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Smal_0871	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Smal_0872	PWY-5367	petroselinate biosynthesis
Smal_0872	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Smal_0872	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Smal_0872	PWY-5989	stearate biosynthesis II (bacteria and plants)
Smal_0872	PWY-5994	palmitate biosynthesis I (animals and fungi)
Smal_0872	PWY-6113	superpathway of mycolate biosynthesis
Smal_0872	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Smal_0872	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Smal_0872	PWY-6951	Smal_0872
Smal_0872	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Smal_0872	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Smal_0872	PWYG-321	mycolate biosynthesis
Smal_0875	PWY-5958	acridone alkaloid biosynthesis
Smal_0875	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Smal_0875	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Smal_0877	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Smal_0877	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Smal_0877	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Smal_0877	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Smal_0877	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Smal_0877	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Smal_0922	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Smal_0929	PWY-3341	L-proline biosynthesis III
Smal_0929	PWY-4981	L-proline biosynthesis II (from arginine)
Smal_0929	PWY-6344	L-ornithine degradation II (Stickland reaction)
Smal_0930	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Smal_0942	PWY-5686	UMP biosynthesis
Smal_0958	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Smal_0958	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Smal_0961	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Smal_0961	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Smal_0965	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Smal_0965	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Smal_0969	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Smal_0969	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Smal_0969	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Smal_0997	PWY-6823	molybdenum cofactor biosynthesis
Smal_0997	PWY-6891	thiazole biosynthesis II (Bacillus)
Smal_0997	PWY-6892	thiazole biosynthesis I (E. coli)
Smal_0997	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Smal_1003	PWY-6424	Smal_1003
Smal_1011	PWY-2941	L-lysine biosynthesis II
Smal_1011	PWY-2942	L-lysine biosynthesis III
Smal_1011	PWY-5097	L-lysine biosynthesis VI
Smal_1011	PWY-6559	spermidine biosynthesis II
Smal_1011	PWY-6562	norspermidine biosynthesis
Smal_1011	PWY-7153	grixazone biosynthesis
Smal_1013	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Smal_1013	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Smal_1020	PWY-5941	glycogen degradation II (eukaryotic)
Smal_1020	PWY-6724	starch degradation II
Smal_1020	PWY-6737	starch degradation V
Smal_1020	PWY-7238	sucrose biosynthesis II
Smal_1043	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
Smal_1076	PWY-5796	malonate decarboxylase activation
Smal_1077	PWY-5796	malonate decarboxylase activation
Smal_1078	PWY-6060	malonate degradation II (biotin-dependent)
Smal_1079	PWY-4381	fatty acid biosynthesis initiation I
Smal_1079	PWY-5743	3-hydroxypropanoate cycle
Smal_1079	PWY-5744	glyoxylate assimilation
Smal_1079	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Smal_1079	PWY-6060	malonate degradation II (biotin-dependent)
Smal_1079	PWY-6679	jadomycin biosynthesis
Smal_1079	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Smal_1081	PWY-5794	malonate degradation I (biotin-independent)
Smal_1081	PWY-6060	malonate degradation II (biotin-dependent)
Smal_1083	PWY-7254	TCA cycle VII (acetate-producers)
Smal_1124	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Smal_1124	PWY-6167	flavin biosynthesis II (archaea)
Smal_1124	PWY-6168	flavin biosynthesis III (fungi)
Smal_1127	PWY-7560	methylerythritol phosphate pathway II
Smal_1141	PWY-3781	aerobic respiration I (cytochrome c)
Smal_1141	PWY-4521	arsenite oxidation I (respiratory)
Smal_1141	PWY-6692	Fe(II) oxidation
Smal_1141	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Smal_1141	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
Smal_1151	PWY-723	alkylnitronates degradation
Smal_1155	PWY-6829	tRNA methylation (yeast)
Smal_1155	PWY-7285	methylwyosine biosynthesis
Smal_1155	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Smal_1165	PWY-5506	methanol oxidation to formaldehyde IV
Smal_1198	PWY-1622	formaldehyde assimilation I (serine pathway)
Smal_1198	PWY-5484	glycolysis II (from fructose 6-phosphate)
Smal_1209	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Smal_1238	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Smal_1249	PWY-4381	fatty acid biosynthesis initiation I
Smal_1249	PWY-5743	3-hydroxypropanoate cycle
Smal_1249	PWY-5744	glyoxylate assimilation
Smal_1249	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Smal_1249	PWY-6679	jadomycin biosynthesis
Smal_1249	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Smal_1255	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Smal_1255	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Smal_1255	PWY-5989	stearate biosynthesis II (bacteria and plants)
Smal_1255	PWY-5994	palmitate biosynthesis I (animals and fungi)
Smal_1255	PWY-6113	superpathway of mycolate biosynthesis
Smal_1255	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Smal_1255	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Smal_1255	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Smal_1255	PWYG-321	mycolate biosynthesis
Smal_1259	PWY-7560	methylerythritol phosphate pathway II
Smal_1294	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Smal_1340	PWY-381	nitrate reduction II (assimilatory)
Smal_1340	PWY-5675	nitrate reduction V (assimilatory)
Smal_1340	PWY-6549	L-glutamine biosynthesis III
Smal_1340	PWY-6963	ammonia assimilation cycle I
Smal_1340	PWY-6964	ammonia assimilation cycle II
Smal_1361	PWY-3781	aerobic respiration I (cytochrome c)
Smal_1361	PWY-6692	Fe(II) oxidation
Smal_1361	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
Smal_1361	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Smal_1368	PWY-5316	nicotine biosynthesis
Smal_1368	PWY-5381	pyridine nucleotide cycling (plants)
Smal_1368	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Smal_1368	PWY-7342	superpathway of nicotine biosynthesis
Smal_1373	PWY-6854	ethylene biosynthesis III (microbes)
Smal_1400	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Smal_1400	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Smal_1404	PWY-5269	cardiolipin biosynthesis II
Smal_1404	PWY-5668	cardiolipin biosynthesis I
Smal_1439	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Smal_1439	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Smal_1448	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Smal_1448	PWY-7177	UTP and CTP dephosphorylation II
Smal_1448	PWY-7185	UTP and CTP dephosphorylation I
Smal_1449	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Smal_1449	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Smal_1452	PWY-1042	glycolysis IV (plant cytosol)
Smal_1452	PWY-1622	formaldehyde assimilation I (serine pathway)
Smal_1452	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Smal_1452	PWY-5484	glycolysis II (from fructose 6-phosphate)
Smal_1452	PWY-5723	Rubisco shunt
Smal_1452	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Smal_1452	PWY-6886	1-butanol autotrophic biosynthesis
Smal_1452	PWY-6901	superpathway of glucose and xylose degradation
Smal_1452	PWY-7003	glycerol degradation to butanol
Smal_1452	PWY-7124	ethylene biosynthesis V (engineered)
Smal_1452	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Smal_1454	PWY-7560	methylerythritol phosphate pathway II
Smal_1455	PWY-7560	methylerythritol phosphate pathway II
Smal_1458	PWY-5381	pyridine nucleotide cycling (plants)
Smal_1458	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Smal_1458	PWY-6596	adenosine nucleotides degradation I
Smal_1458	PWY-6606	guanosine nucleotides degradation II
Smal_1458	PWY-6607	guanosine nucleotides degradation I
Smal_1458	PWY-6608	guanosine nucleotides degradation III
Smal_1458	PWY-7185	UTP and CTP dephosphorylation I
Smal_1469	PWY-6614	tetrahydrofolate biosynthesis
Smal_1470	PWY-2781	<i>cis</i>-zeatin biosynthesis
Smal_1488	PWY-6891	thiazole biosynthesis II (Bacillus)
Smal_1488	PWY-6892	thiazole biosynthesis I (E. coli)
Smal_1488	PWY-7560	methylerythritol phosphate pathway II
Smal_1505	PWY-6910	hydroxymethylpyrimidine salvage
Smal_1505	PWY-7356	thiamin salvage IV (yeast)
Smal_1505	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Smal_1511	PWY-2941	L-lysine biosynthesis II
Smal_1511	PWY-2942	L-lysine biosynthesis III
Smal_1511	PWY-5097	L-lysine biosynthesis VI
Smal_1516	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Smal_1516	PWY-6148	tetrahydromethanopterin biosynthesis
Smal_1516	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Smal_1516	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Smal_1517	PWY-6654	phosphopantothenate biosynthesis III
Smal_1520	PWY-5155	&beta;-alanine biosynthesis III
Smal_1521	PWY-3801	sucrose degradation II (sucrose synthase)
Smal_1521	PWY-5054	sorbitol biosynthesis I
Smal_1521	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Smal_1521	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Smal_1521	PWY-5659	GDP-mannose biosynthesis
Smal_1521	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Smal_1521	PWY-621	sucrose degradation III (sucrose invertase)
Smal_1521	PWY-622	starch biosynthesis
Smal_1521	PWY-6531	mannitol cycle
Smal_1521	PWY-6981	chitin biosynthesis
Smal_1521	PWY-7238	sucrose biosynthesis II
Smal_1521	PWY-7347	sucrose biosynthesis III
Smal_1521	PWY-7385	1,3-propanediol biosynthesis (engineered)
Smal_1524	PWY-7560	methylerythritol phosphate pathway II
Smal_1527	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Smal_1527	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Smal_1527	PWY-7242	D-fructuronate degradation
Smal_1527	PWY-7310	D-glucosaminate degradation
Smal_1528	PWY-5101	L-isoleucine biosynthesis II
Smal_1528	PWY-5103	L-isoleucine biosynthesis III
Smal_1528	PWY-5104	L-isoleucine biosynthesis IV
Smal_1528	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Smal_1529	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Smal_1529	PWY-6855	chitin degradation I (archaea)
Smal_1529	PWY-6906	chitin derivatives degradation
Smal_1530	PWY-2723	trehalose degradation V
Smal_1530	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Smal_1530	PWY-5661	GDP-glucose biosynthesis
Smal_1530	PWY-7238	sucrose biosynthesis II
Smal_1530	PWY-7385	1,3-propanediol biosynthesis (engineered)
Smal_1531	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Smal_1537	PWY-3781	aerobic respiration I (cytochrome c)
Smal_1537	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Smal_1537	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Smal_1537	PWY-5690	TCA cycle II (plants and fungi)
Smal_1537	PWY-6728	methylaspartate cycle
Smal_1537	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Smal_1537	PWY-7254	TCA cycle VII (acetate-producers)
Smal_1537	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Smal_1538	PWY-3781	aerobic respiration I (cytochrome c)
Smal_1538	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Smal_1538	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Smal_1538	PWY-5690	TCA cycle II (plants and fungi)
Smal_1538	PWY-6728	methylaspartate cycle
Smal_1538	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Smal_1538	PWY-7254	TCA cycle VII (acetate-producers)
Smal_1538	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Smal_1553	PWY-4041	&gamma;-glutamyl cycle
Smal_1553	PWY-5826	hypoglycin biosynthesis
Smal_1556	PWY-7183	pyrimidine nucleobases salvage I
Smal_1558	PWY-4702	phytate degradation I
Smal_1579	PWY-6825	phosphatidylcholine biosynthesis V
Smal_1604	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Smal_1604	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Smal_1605	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
Smal_1614	PWY-6700	queuosine biosynthesis
Smal_1615	PWY-6700	queuosine biosynthesis
Smal_1628	PWY-6605	adenine and adenosine salvage II
Smal_1628	PWY-6610	adenine and adenosine salvage IV
Smal_1642	PWY-43	putrescine biosynthesis II
Smal_1645	PWY-7205	CMP phosphorylation
Smal_1650	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Smal_1650	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Smal_1650	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Smal_1652	PWY-3801	sucrose degradation II (sucrose synthase)
Smal_1652	PWY-6527	stachyose degradation
Smal_1652	PWY-6981	chitin biosynthesis
Smal_1652	PWY-7238	sucrose biosynthesis II
Smal_1652	PWY-7343	UDP-glucose biosynthesis
Smal_1654	PWY-1361	benzoyl-CoA degradation I (aerobic)
Smal_1654	PWY-5109	2-methylbutanoate biosynthesis
Smal_1654	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Smal_1654	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Smal_1654	PWY-5177	glutaryl-CoA degradation
Smal_1654	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Smal_1654	PWY-6435	4-hydroxybenzoate biosynthesis V
Smal_1654	PWY-6583	pyruvate fermentation to butanol I
Smal_1654	PWY-6863	pyruvate fermentation to hexanol
Smal_1654	PWY-6883	pyruvate fermentation to butanol II
Smal_1654	PWY-6944	androstenedione degradation
Smal_1654	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Smal_1654	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Smal_1654	PWY-7007	methyl ketone biosynthesis
Smal_1654	PWY-7046	4-coumarate degradation (anaerobic)
Smal_1654	PWY-7094	fatty acid salvage
Smal_1654	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Smal_1654	PWY-735	jasmonic acid biosynthesis
Smal_1654	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Smal_1656	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Smal_1656	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Smal_1656	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Smal_1656	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Smal_1656	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Smal_1656	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Smal_1656	PWY-7205	CMP phosphorylation
Smal_1656	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Smal_1656	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Smal_1656	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Smal_1656	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Smal_1656	PWY-7224	purine deoxyribonucleosides salvage
Smal_1656	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Smal_1656	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Smal_1669	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Smal_1669	PWY-2201	folate transformations I
Smal_1669	PWY-3841	folate transformations II
Smal_1669	PWY-5030	L-histidine degradation III
Smal_1669	PWY-5497	purine nucleobases degradation II (anaerobic)
Smal_1669	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Smal_1670	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Smal_1670	PWY-6596	adenosine nucleotides degradation I
Smal_1670	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Smal_1672	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Smal_1715	PWY-5350	thiosulfate disproportionation III (rhodanese)
Smal_1723	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Smal_1723	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Smal_1724	PWY-5686	UMP biosynthesis
Smal_1749	PWY-2941	L-lysine biosynthesis II
Smal_1749	PWY-2942	L-lysine biosynthesis III
Smal_1749	PWY-5097	L-lysine biosynthesis VI
Smal_1749	PWY-6559	spermidine biosynthesis II
Smal_1749	PWY-6562	norspermidine biosynthesis
Smal_1749	PWY-7153	grixazone biosynthesis
Smal_1750	PWY-702	L-methionine biosynthesis II
Smal_1766	PWY-2723	trehalose degradation V
Smal_1766	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Smal_1766	PWY-5661	GDP-glucose biosynthesis
Smal_1766	PWY-7238	sucrose biosynthesis II
Smal_1766	PWY-7385	1,3-propanediol biosynthesis (engineered)
Smal_1779	PWY-6807	xyloglucan degradation II (exoglucanase)
Smal_1781	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
Smal_1781	PWY-5389	3-methylthiopropanoate biosynthesis
Smal_1782	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
Smal_1788	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Smal_1788	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Smal_1810	PWY-2941	L-lysine biosynthesis II
Smal_1810	PWY-2942	L-lysine biosynthesis III
Smal_1810	PWY-5097	L-lysine biosynthesis VI
Smal_1811	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Smal_1811	PWY-5686	UMP biosynthesis
Smal_1811	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Smal_1812	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Smal_1812	PWY-5686	UMP biosynthesis
Smal_1812	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Smal_1832	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Smal_1832	PWY-7494	choline degradation IV
Smal_1833	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Smal_1833	PWY-7494	choline degradation IV
Smal_1839	PWY-5747	2-methylcitrate cycle II
Smal_1877	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Smal_1977	PWY-4202	arsenate detoxification I (glutaredoxin)
Smal_1977	PWY-4621	arsenate detoxification II (glutaredoxin)
Smal_2031	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Smal_2031	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Smal_2032	PWY-7310	D-glucosaminate degradation
Smal_2038	PWY-2201	folate transformations I
Smal_2038	PWY-3841	folate transformations II
Smal_2042	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Smal_2042	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Smal_2042	PWY-6936	seleno-amino acid biosynthesis
Smal_2042	PWY-702	L-methionine biosynthesis II
Smal_2067	PWY-6986	alginate degradation
Smal_2085	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Smal_2240	PWY-6823	molybdenum cofactor biosynthesis
Smal_2242	PWY-6823	molybdenum cofactor biosynthesis
Smal_2244	PWY-6823	molybdenum cofactor biosynthesis
Smal_2262	PWY-7039	phosphatidate metabolism, as a signaling molecule
Smal_2271	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Smal_2274	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Smal_2276	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Smal_2276	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Smal_2276	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Smal_2276	PWY-6406	salicylate biosynthesis I
Smal_2282	PWY-6854	ethylene biosynthesis III (microbes)
Smal_2295	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Smal_2295	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Smal_2295	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Smal_2295	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Smal_2295	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Smal_2295	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Smal_2295	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Smal_2295	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Smal_2296	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Smal_2296	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Smal_2296	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Smal_2296	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Smal_2296	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Smal_2296	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Smal_2296	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Smal_2296	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Smal_2359	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Smal_2359	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Smal_2359	PWY-6454	vancomycin resistance I
Smal_2359	PWY-6901	superpathway of glucose and xylose degradation
Smal_2377	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Smal_2377	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Smal_2383	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Smal_2419	PWY-6502	oxidized GTP and dGTP detoxification
Smal_2422	PWY-5484	glycolysis II (from fructose 6-phosphate)
Smal_2437	PWY-6902	chitin degradation II
Smal_2535	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Smal_2538	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Smal_2539	PWY-3461	L-tyrosine biosynthesis II
Smal_2539	PWY-3462	L-phenylalanine biosynthesis II
Smal_2539	PWY-6120	L-tyrosine biosynthesis III
Smal_2539	PWY-6627	salinosporamide A biosynthesis
Smal_2539	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Smal_2549	PWY-5028	L-histidine degradation II
Smal_2549	PWY-5030	L-histidine degradation III
Smal_2550	PWY-5028	L-histidine degradation II
Smal_2550	PWY-5030	L-histidine degradation III
Smal_2552	PWY-5028	L-histidine degradation II
Smal_2552	PWY-5030	L-histidine degradation III
Smal_2561	PWY-43	putrescine biosynthesis II
Smal_2579	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
Smal_2579	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Smal_2596	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Smal_2596	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Smal_2596	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Smal_2596	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Smal_2597	PWY-5647	2-nitrobenzoate degradation I
Smal_2597	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Smal_2597	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Smal_2597	PWY-6505	L-tryptophan degradation XII (Geobacillus)
Smal_2598	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Smal_2598	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Smal_2599	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Smal_2599	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Smal_2603	PWY-5381	pyridine nucleotide cycling (plants)
Smal_2603	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Smal_2603	PWY-6596	adenosine nucleotides degradation I
Smal_2603	PWY-6606	guanosine nucleotides degradation II
Smal_2603	PWY-6607	guanosine nucleotides degradation I
Smal_2603	PWY-6608	guanosine nucleotides degradation III
Smal_2603	PWY-7185	UTP and CTP dephosphorylation I
Smal_2604	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Smal_2604	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Smal_2604	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Smal_2605	PWY-5022	4-aminobutanoate degradation V
Smal_2605	PWY-6728	methylaspartate cycle
Smal_2605	PWY-7126	ethylene biosynthesis IV
Smal_2612	PWY-2201	folate transformations I
Smal_2612	PWY-3841	folate transformations II
Smal_2626	PWY-5392	reductive TCA cycle II
Smal_2626	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Smal_2626	PWY-5690	TCA cycle II (plants and fungi)
Smal_2626	PWY-5913	TCA cycle VI (obligate autotrophs)
Smal_2626	PWY-6728	methylaspartate cycle
Smal_2626	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Smal_2626	PWY-7254	TCA cycle VII (acetate-producers)
Smal_2626	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Smal_2627	PWY-6123	inosine-5'-phosphate biosynthesis I
Smal_2627	PWY-6124	inosine-5'-phosphate biosynthesis II
Smal_2627	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Smal_2627	PWY-7234	inosine-5'-phosphate biosynthesis III
Smal_2630	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Smal_2631	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Smal_2632	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Smal_2632	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Smal_2651	PWY-6803	phosphatidylcholine acyl editing
Smal_2651	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
Smal_2651	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
Smal_2651	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
Smal_2652	PWY-4202	arsenate detoxification I (glutaredoxin)
Smal_2652	PWY-4621	arsenate detoxification II (glutaredoxin)
Smal_2669	PWY-6854	ethylene biosynthesis III (microbes)
Smal_2674	PWY-7158	L-phenylalanine degradation V
Smal_2708	PWY-5344	L-homocysteine biosynthesis
Smal_2714	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
Smal_2723	PWY-4983	L-citrulline-nitric oxide cycle
Smal_2723	PWY-4984	urea cycle
Smal_2723	PWY-5	canavanine biosynthesis
Smal_2723	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Smal_2723	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Smal_2724	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Smal_2724	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Smal_2726	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Smal_2726	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Smal_2728	PWY-4983	L-citrulline-nitric oxide cycle
Smal_2728	PWY-4984	urea cycle
Smal_2728	PWY-5	canavanine biosynthesis
Smal_2728	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Smal_2728	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Smal_2729	PWY-5686	UMP biosynthesis
Smal_2736	PWY-5686	UMP biosynthesis
Smal_2739	PWY-181	photorespiration
Smal_2740	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
Smal_2740	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
Smal_2740	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
Smal_2740	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Smal_2740	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
Smal_2740	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
Smal_2740	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
Smal_2740	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
Smal_2740	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Smal_2740	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
Smal_2747	PWY-2301	<i>myo</i>-inositol biosynthesis
Smal_2747	PWY-4702	phytate degradation I
Smal_2747	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Smal_2750	PWY-5676	acetyl-CoA fermentation to butanoate II
Smal_2750	PWY-5741	ethylmalonyl-CoA pathway
Smal_2750	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Smal_2757	PWY-6938	NADH repair
Smal_2779	PWY-6891	thiazole biosynthesis II (Bacillus)
Smal_2779	PWY-6892	thiazole biosynthesis I (E. coli)
Smal_2779	PWY-7560	methylerythritol phosphate pathway II
Smal_2793	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Smal_2793	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Smal_2809	PWY-6902	chitin degradation II
Smal_2833	PWY-1042	glycolysis IV (plant cytosol)
Smal_2833	PWY-5484	glycolysis II (from fructose 6-phosphate)
Smal_2833	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Smal_2833	PWY-7003	glycerol degradation to butanol
Smal_2838	PWY-3821	galactose degradation III
Smal_2838	PWY-6317	galactose degradation I (Leloir pathway)
Smal_2838	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Smal_2838	PWY-6527	stachyose degradation
Smal_2838	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Smal_2838	PWY-7344	UDP-D-galactose biosynthesis
Smal_2839	PWY-6749	CMP-legionaminate biosynthesis I
Smal_2840	PWY-4381	fatty acid biosynthesis initiation I
Smal_2840	PWY-5743	3-hydroxypropanoate cycle
Smal_2840	PWY-5744	glyoxylate assimilation
Smal_2840	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Smal_2840	PWY-6679	jadomycin biosynthesis
Smal_2840	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Smal_2854	PWY-2941	L-lysine biosynthesis II
Smal_2854	PWY-2942	L-lysine biosynthesis III
Smal_2854	PWY-5097	L-lysine biosynthesis VI
Smal_2854	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Smal_2854	PWY-6559	spermidine biosynthesis II
Smal_2854	PWY-6562	norspermidine biosynthesis
Smal_2854	PWY-7153	grixazone biosynthesis
Smal_2854	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Smal_2856	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Smal_2859	PWY-5669	phosphatidylethanolamine biosynthesis I
Smal_2869	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Smal_2890	PWY-5491	diethylphosphate degradation
Smal_2909	PWY-5381	pyridine nucleotide cycling (plants)
Smal_2909	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Smal_2968	PWY-6902	chitin degradation II
Smal_2982	PWY-1361	benzoyl-CoA degradation I (aerobic)
Smal_2982	PWY-5109	2-methylbutanoate biosynthesis
Smal_2982	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Smal_2982	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Smal_2982	PWY-5177	glutaryl-CoA degradation
Smal_2982	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Smal_2982	PWY-6435	4-hydroxybenzoate biosynthesis V
Smal_2982	PWY-6583	pyruvate fermentation to butanol I
Smal_2982	PWY-6863	pyruvate fermentation to hexanol
Smal_2982	PWY-6883	pyruvate fermentation to butanol II
Smal_2982	PWY-6944	androstenedione degradation
Smal_2982	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Smal_2982	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Smal_2982	PWY-7007	methyl ketone biosynthesis
Smal_2982	PWY-7046	4-coumarate degradation (anaerobic)
Smal_2982	PWY-7094	fatty acid salvage
Smal_2982	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Smal_2982	PWY-735	jasmonic acid biosynthesis
Smal_2982	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Smal_3013	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Smal_3030	PWY-5747	2-methylcitrate cycle II
Smal_3033	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Smal_3033	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Smal_3036	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Smal_3037	PWY-6164	3-dehydroquinate biosynthesis I
Smal_3039	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Smal_3039	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Smal_3095	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Smal_3095	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Smal_3095	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Smal_3095	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Smal_3115	PWY-6703	preQ<sub>0</sub> biosynthesis
Smal_3116	PWY-6703	preQ<sub>0</sub> biosynthesis
Smal_3141	PWY-5344	L-homocysteine biosynthesis
Smal_3141	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Smal_3161	PWY-6857	retinol biosynthesis
Smal_3163	PWY-5392	reductive TCA cycle II
Smal_3163	PWY-5537	pyruvate fermentation to acetate V
Smal_3163	PWY-5538	pyruvate fermentation to acetate VI
Smal_3163	PWY-5690	TCA cycle II (plants and fungi)
Smal_3163	PWY-5913	TCA cycle VI (obligate autotrophs)
Smal_3163	PWY-6728	methylaspartate cycle
Smal_3163	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Smal_3163	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Smal_3164	PWY-5392	reductive TCA cycle II
Smal_3164	PWY-5537	pyruvate fermentation to acetate V
Smal_3164	PWY-5538	pyruvate fermentation to acetate VI
Smal_3164	PWY-5690	TCA cycle II (plants and fungi)
Smal_3164	PWY-5913	TCA cycle VI (obligate autotrophs)
Smal_3164	PWY-6728	methylaspartate cycle
Smal_3164	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Smal_3164	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Smal_3190	PWY-6891	thiazole biosynthesis II (Bacillus)
Smal_3190	PWY-6892	thiazole biosynthesis I (E. coli)
Smal_3210	PWY-6936	seleno-amino acid biosynthesis
Smal_3213	PWY-1042	glycolysis IV (plant cytosol)
Smal_3213	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Smal_3213	PWY-5484	glycolysis II (from fructose 6-phosphate)
Smal_3213	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Smal_3213	PWY-7385	1,3-propanediol biosynthesis (engineered)
Smal_3214	PWY-1042	glycolysis IV (plant cytosol)
Smal_3214	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Smal_3214	PWY-5484	glycolysis II (from fructose 6-phosphate)
Smal_3214	PWY-5723	Rubisco shunt
Smal_3214	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Smal_3214	PWY-6886	1-butanol autotrophic biosynthesis
Smal_3214	PWY-6901	superpathway of glucose and xylose degradation
Smal_3214	PWY-7003	glycerol degradation to butanol
Smal_3214	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Smal_3214	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Smal_3216	PWY-1042	glycolysis IV (plant cytosol)
Smal_3216	PWY-5484	glycolysis II (from fructose 6-phosphate)
Smal_3216	PWY-6886	1-butanol autotrophic biosynthesis
Smal_3216	PWY-6901	superpathway of glucose and xylose degradation
Smal_3216	PWY-7003	glycerol degradation to butanol
Smal_3219	PWY-1042	glycolysis IV (plant cytosol)
Smal_3219	PWY-5484	glycolysis II (from fructose 6-phosphate)
Smal_3219	PWY-6901	superpathway of glucose and xylose degradation
Smal_3219	PWY-7003	glycerol degradation to butanol
Smal_3228	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Smal_3228	PWY-5723	Rubisco shunt
Smal_3228	PWY-6891	thiazole biosynthesis II (Bacillus)
Smal_3228	PWY-6892	thiazole biosynthesis I (E. coli)
Smal_3228	PWY-6901	superpathway of glucose and xylose degradation
Smal_3228	PWY-7560	methylerythritol phosphate pathway II
Smal_3260	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Smal_3267	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Smal_3272	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Smal_3283	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Smal_3283	PWY-5723	Rubisco shunt
Smal_3287	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Smal_3287	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Smal_3287	PWY-6897	thiamin salvage II
Smal_3287	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Smal_3287	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Smal_3287	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Smal_3287	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Smal_3288	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Smal_3302	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Smal_3303	PWY-1042	glycolysis IV (plant cytosol)
Smal_3303	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Smal_3303	PWY-5484	glycolysis II (from fructose 6-phosphate)
Smal_3303	PWY-7385	1,3-propanediol biosynthesis (engineered)
Smal_3312	PWY-5874	heme degradation
Smal_3312	PWY-5915	phycoerythrobilin biosynthesis I
Smal_3312	PWY-5917	phycocyanobilin biosynthesis
Smal_3312	PWY-7170	phytochromobilin biosynthesis
Smal_3325	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Smal_3327	PWY-4041	&gamma;-glutamyl cycle
Smal_3327	PWY-5826	hypoglycin biosynthesis
Smal_3328	PWY-5101	L-isoleucine biosynthesis II
Smal_3328	PWY-5103	L-isoleucine biosynthesis III
Smal_3328	PWY-5104	L-isoleucine biosynthesis IV
Smal_3328	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Smal_3329	PWY-5101	L-isoleucine biosynthesis II
Smal_3329	PWY-5103	L-isoleucine biosynthesis III
Smal_3329	PWY-5104	L-isoleucine biosynthesis IV
Smal_3329	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Smal_3329	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Smal_3329	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Smal_3329	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Smal_3332	PWY-6871	3-methylbutanol biosynthesis
Smal_3336	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Smal_3352	PWY-1281	sulfoacetaldehyde degradation I
Smal_3352	PWY-5482	pyruvate fermentation to acetate II
Smal_3352	PWY-5485	pyruvate fermentation to acetate IV
Smal_3352	PWY-5497	purine nucleobases degradation II (anaerobic)
Smal_3352	PWY-6637	sulfolactate degradation II
Smal_3362	PWY-5676	acetyl-CoA fermentation to butanoate II
Smal_3362	PWY-5741	ethylmalonyl-CoA pathway
Smal_3362	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Smal_3385	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Smal_3387	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Smal_3387	PWY-3162	L-tryptophan degradation V (side chain pathway)
Smal_3387	PWY-5057	L-valine degradation II
Smal_3387	PWY-5076	L-leucine degradation III
Smal_3387	PWY-5078	L-isoleucine degradation II
Smal_3387	PWY-5079	L-phenylalanine degradation III
Smal_3387	PWY-5082	L-methionine degradation III
Smal_3387	PWY-5480	pyruvate fermentation to ethanol I
Smal_3387	PWY-5486	pyruvate fermentation to ethanol II
Smal_3387	PWY-5751	phenylethanol biosynthesis
Smal_3387	PWY-6028	acetoin degradation
Smal_3387	PWY-6313	serotonin degradation
Smal_3387	PWY-6333	acetaldehyde biosynthesis I
Smal_3387	PWY-6342	noradrenaline and adrenaline degradation
Smal_3387	PWY-6587	pyruvate fermentation to ethanol III
Smal_3387	PWY-6802	salidroside biosynthesis
Smal_3387	PWY-6871	3-methylbutanol biosynthesis
Smal_3387	PWY-7013	L-1,2-propanediol degradation
Smal_3387	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Smal_3387	PWY-7118	chitin degradation to ethanol
Smal_3387	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Smal_3387	PWY-7557	dehydrodiconiferyl alcohol degradation
Smal_3398	PWY-6840	homoglutathione biosynthesis
Smal_3398	PWY-7255	ergothioneine biosynthesis I (bacteria)
Smal_3421	PWY-6906	chitin derivatives degradation
Smal_3421	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Smal_3421	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Smal_3425	PWY-2723	trehalose degradation V
Smal_3425	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Smal_3425	PWY-5661	GDP-glucose biosynthesis
Smal_3425	PWY-7238	sucrose biosynthesis II
Smal_3425	PWY-7385	1,3-propanediol biosynthesis (engineered)
Smal_3427	PWY-6902	chitin degradation II
Smal_3431	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Smal_3431	PWY-6148	tetrahydromethanopterin biosynthesis
Smal_3431	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Smal_3431	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Smal_3442	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Smal_3442	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Smal_3442	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Smal_3443	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Smal_3443	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Smal_3446	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Smal_3446	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Smal_3460	PWY-5839	menaquinol-7 biosynthesis
Smal_3460	PWY-5844	menaquinol-9 biosynthesis
Smal_3460	PWY-5849	menaquinol-6 biosynthesis
Smal_3460	PWY-5890	menaquinol-10 biosynthesis
Smal_3460	PWY-5891	menaquinol-11 biosynthesis
Smal_3460	PWY-5892	menaquinol-12 biosynthesis
Smal_3460	PWY-5895	menaquinol-13 biosynthesis
Smal_3476	PWY-2941	L-lysine biosynthesis II
Smal_3476	PWY-5097	L-lysine biosynthesis VI
Smal_3496	PWY-5386	methylglyoxal degradation I
Smal_3499	PWY-6749	CMP-legionaminate biosynthesis I
Smal_3508	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Smal_3511	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Smal_3513	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Smal_3520	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Smal_3520	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Smal_3524	PWY-4261	glycerol degradation I
Smal_3524	PWY-6118	glycerol-3-phosphate shuttle
Smal_3524	PWY-6952	glycerophosphodiester degradation
Smal_3525	PWY-4261	glycerol degradation I
Smal_3530	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Smal_3530	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Smal_3575	PWY-6168	flavin biosynthesis III (fungi)
Smal_3575	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Smal_3614	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Smal_3614	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Smal_3614	PWY-6164	3-dehydroquinate biosynthesis I
Smal_3634	PWY-7153	grixazone biosynthesis
Smal_3638	PWY-5491	diethylphosphate degradation
Smal_3646	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Smal_3646	PWY-6416	quinate degradation II
Smal_3646	PWY-6707	gallate biosynthesis
Smal_3662	PWY-6123	inosine-5'-phosphate biosynthesis I
Smal_3662	PWY-6124	inosine-5'-phosphate biosynthesis II
Smal_3662	PWY-7234	inosine-5'-phosphate biosynthesis III
Smal_3665	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Smal_3665	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Smal_3665	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Smal_3676	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Smal_3684	PWY-5913	TCA cycle VI (obligate autotrophs)
Smal_3684	PWY-6549	L-glutamine biosynthesis III
Smal_3684	PWY-6728	methylaspartate cycle
Smal_3684	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Smal_3684	PWY-7124	ethylene biosynthesis V (engineered)
Smal_3684	PWY-7254	TCA cycle VII (acetate-producers)
Smal_3684	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Smal_3687	PWY-6700	queuosine biosynthesis
Smal_3700	PWY-5381	pyridine nucleotide cycling (plants)
Smal_3714	PWY-6834	spermidine biosynthesis III
Smal_3720	PWY-5958	acridone alkaloid biosynthesis
Smal_3720	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Smal_3720	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Smal_3722	PWY-5958	acridone alkaloid biosynthesis
Smal_3722	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Smal_3722	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Smal_3723	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Smal_3723	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Smal_3723	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Smal_3725	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Smal_3725	PWY-5723	Rubisco shunt
Smal_3727	PWY-6123	inosine-5'-phosphate biosynthesis I
Smal_3727	PWY-6124	inosine-5'-phosphate biosynthesis II
Smal_3727	PWY-7234	inosine-5'-phosphate biosynthesis III
Smal_3768	PWY-40	putrescine biosynthesis I
Smal_3768	PWY-43	putrescine biosynthesis II
Smal_3768	PWY-6305	putrescine biosynthesis IV
Smal_3768	PWY-6834	spermidine biosynthesis III
Smal_3794	PWY-3781	aerobic respiration I (cytochrome c)
Smal_3794	PWY-4521	arsenite oxidation I (respiratory)
Smal_3794	PWY-6692	Fe(II) oxidation
Smal_3794	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Smal_3794	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
Smal_3819	PWY-6906	chitin derivatives degradation
Smal_3819	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Smal_3819	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Smal_3827	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Smal_3828	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Smal_3828	PWY-6578	8-amino-7-oxononanoate biosynthesis III
Smal_3828	PWY-7147	8-amino-7-oxononanoate biosynthesis II
Smal_3829	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Smal_3831	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Smal_3851	PWY-5101	L-isoleucine biosynthesis II
Smal_3851	PWY-5103	L-isoleucine biosynthesis III
Smal_3851	PWY-5104	L-isoleucine biosynthesis IV
Smal_3851	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Smal_3856	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Smal_3859	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Smal_3859	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Smal_3883	PWY-6654	phosphopantothenate biosynthesis III
Smal_3902	PWY-5392	reductive TCA cycle II
Smal_3902	PWY-5537	pyruvate fermentation to acetate V
Smal_3902	PWY-5538	pyruvate fermentation to acetate VI
Smal_3902	PWY-5690	TCA cycle II (plants and fungi)
Smal_3902	PWY-5913	TCA cycle VI (obligate autotrophs)
Smal_3902	PWY-6728	methylaspartate cycle
Smal_3902	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Smal_3902	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Smal_3909	PWY-5367	petroselinate biosynthesis
Smal_3909	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Smal_3909	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Smal_3909	PWY-5989	stearate biosynthesis II (bacteria and plants)
Smal_3909	PWY-5994	palmitate biosynthesis I (animals and fungi)
Smal_3909	PWY-6113	superpathway of mycolate biosynthesis
Smal_3909	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Smal_3909	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Smal_3909	PWY-6951	Smal_3909
Smal_3909	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Smal_3909	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Smal_3909	PWYG-321	mycolate biosynthesis
Smal_3938	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Smal_3938	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Smal_3968	PWY-6012	acyl carrier protein metabolism I
Smal_3968	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Smal_3974	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Smal_3974	PWY-7118	chitin degradation to ethanol
Smal_4006	PWY-5663	tetrahydrobiopterin biosynthesis I
Smal_4006	PWY-5664	tetrahydrobiopterin biosynthesis II
Smal_4006	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Smal_4006	PWY-6703	preQ<sub>0</sub> biosynthesis
Smal_4006	PWY-6983	tetrahydrobiopterin biosynthesis III
Smal_4006	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Smal_4032	PWY-7533	gliotoxin biosynthesis
