Spaf_0012	PWY-6599	guanine and guanosine salvage II
Spaf_0012	PWY-6609	adenine and adenosine salvage III
Spaf_0012	PWY-6610	adenine and adenosine salvage IV
Spaf_0012	PWY-6620	guanine and guanosine salvage
Spaf_0029	PWY-6123	inosine-5'-phosphate biosynthesis I
Spaf_0029	PWY-6124	inosine-5'-phosphate biosynthesis II
Spaf_0029	PWY-7234	inosine-5'-phosphate biosynthesis III
Spaf_0031	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Spaf_0031	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Spaf_0031	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Spaf_0031	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Spaf_0032	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Spaf_0032	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Spaf_0032	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Spaf_0033	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Spaf_0033	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Spaf_0034	PWY-6123	inosine-5'-phosphate biosynthesis I
Spaf_0034	PWY-6124	inosine-5'-phosphate biosynthesis II
Spaf_0034	PWY-7234	inosine-5'-phosphate biosynthesis III
Spaf_0036	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Spaf_0036	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Spaf_0036	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Spaf_0038	PWY-6123	inosine-5'-phosphate biosynthesis I
Spaf_0038	PWY-7234	inosine-5'-phosphate biosynthesis III
Spaf_0040	PWY-6654	phosphopantothenate biosynthesis III
Spaf_0043	PWY-6123	inosine-5'-phosphate biosynthesis I
Spaf_0043	PWY-6124	inosine-5'-phosphate biosynthesis II
Spaf_0043	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Spaf_0043	PWY-7234	inosine-5'-phosphate biosynthesis III
Spaf_0045	PWY-6807	xyloglucan degradation II (exoglucanase)
Spaf_0046	PWY-7310	D-glucosaminate degradation
Spaf_0052	PWY-2723	trehalose degradation V
Spaf_0052	PWY-6317	galactose degradation I (Leloir pathway)
Spaf_0052	PWY-6737	starch degradation V
Spaf_0058	PWY-3162	L-tryptophan degradation V (side chain pathway)
Spaf_0058	PWY-5057	L-valine degradation II
Spaf_0058	PWY-5076	L-leucine degradation III
Spaf_0058	PWY-5078	L-isoleucine degradation II
Spaf_0058	PWY-5079	L-phenylalanine degradation III
Spaf_0058	PWY-5082	L-methionine degradation III
Spaf_0058	PWY-5162	2-oxopentenoate degradation
Spaf_0058	PWY-5436	L-threonine degradation IV
Spaf_0058	PWY-5480	pyruvate fermentation to ethanol I
Spaf_0058	PWY-5486	pyruvate fermentation to ethanol II
Spaf_0058	PWY-5751	phenylethanol biosynthesis
Spaf_0058	PWY-6028	acetoin degradation
Spaf_0058	PWY-6313	serotonin degradation
Spaf_0058	PWY-6333	acetaldehyde biosynthesis I
Spaf_0058	PWY-6342	noradrenaline and adrenaline degradation
Spaf_0058	PWY-6587	pyruvate fermentation to ethanol III
Spaf_0058	PWY-6802	salidroside biosynthesis
Spaf_0058	PWY-6871	3-methylbutanol biosynthesis
Spaf_0058	PWY-7013	L-1,2-propanediol degradation
Spaf_0058	PWY-7085	triethylamine degradation
Spaf_0058	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Spaf_0058	PWY-7118	chitin degradation to ethanol
Spaf_0058	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Spaf_0058	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Spaf_0058	PWY-7557	dehydrodiconiferyl alcohol degradation
Spaf_0080	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Spaf_0081	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Spaf_0088	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Spaf_0088	PWY-5723	Rubisco shunt
Spaf_0094	PWY-5101	L-isoleucine biosynthesis II
Spaf_0094	PWY-5103	L-isoleucine biosynthesis III
Spaf_0094	PWY-5104	L-isoleucine biosynthesis IV
Spaf_0094	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Spaf_0105	PWY-5958	acridone alkaloid biosynthesis
Spaf_0105	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Spaf_0105	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Spaf_0106	PWY-5958	acridone alkaloid biosynthesis
Spaf_0106	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Spaf_0106	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Spaf_0117	PWY-6700	queuosine biosynthesis
Spaf_0141	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Spaf_0150	PWY-2941	L-lysine biosynthesis II
Spaf_0150	PWY-2942	L-lysine biosynthesis III
Spaf_0150	PWY-5097	L-lysine biosynthesis VI
Spaf_0150	PWY-6559	spermidine biosynthesis II
Spaf_0150	PWY-6562	norspermidine biosynthesis
Spaf_0150	PWY-7153	grixazone biosynthesis
Spaf_0153	PWY-4381	fatty acid biosynthesis initiation I
Spaf_0155	PWY-723	alkylnitronates degradation
Spaf_0156	PWY-4381	fatty acid biosynthesis initiation I
Spaf_0156	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Spaf_0156	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Spaf_0157	PWY-5367	petroselinate biosynthesis
Spaf_0157	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Spaf_0157	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Spaf_0157	PWY-5989	stearate biosynthesis II (bacteria and plants)
Spaf_0157	PWY-5994	palmitate biosynthesis I (animals and fungi)
Spaf_0157	PWY-6113	superpathway of mycolate biosynthesis
Spaf_0157	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Spaf_0157	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Spaf_0157	PWY-6951	Spaf_0157|fabG|YP_006308996.1|GeneID:12945259
Spaf_0157	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Spaf_0157	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Spaf_0157	PWYG-321	mycolate biosynthesis
Spaf_0160	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Spaf_0160	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Spaf_0160	PWY-5989	stearate biosynthesis II (bacteria and plants)
Spaf_0160	PWY-5994	palmitate biosynthesis I (animals and fungi)
Spaf_0160	PWY-6113	superpathway of mycolate biosynthesis
Spaf_0160	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Spaf_0160	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Spaf_0160	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Spaf_0160	PWYG-321	mycolate biosynthesis
Spaf_0162	PWY-4381	fatty acid biosynthesis initiation I
Spaf_0162	PWY-5743	3-hydroxypropanoate cycle
Spaf_0162	PWY-5744	glyoxylate assimilation
Spaf_0162	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Spaf_0162	PWY-6679	jadomycin biosynthesis
Spaf_0162	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Spaf_0163	PWY-4381	fatty acid biosynthesis initiation I
Spaf_0163	PWY-5743	3-hydroxypropanoate cycle
Spaf_0163	PWY-5744	glyoxylate assimilation
Spaf_0163	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Spaf_0163	PWY-6679	jadomycin biosynthesis
Spaf_0163	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Spaf_0164	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Spaf_0169	PWY-7310	D-glucosaminate degradation
Spaf_0191	PWY-6906	chitin derivatives degradation
Spaf_0191	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Spaf_0191	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Spaf_0203	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Spaf_0203	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Spaf_0203	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Spaf_0209	PWY-5381	pyridine nucleotide cycling (plants)
Spaf_0221	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Spaf_0221	PWY-6153	autoinducer AI-2 biosynthesis I
Spaf_0221	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
Spaf_0223	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Spaf_0237	PWY-6936	seleno-amino acid biosynthesis
Spaf_0259	PWY-6902	chitin degradation II
Spaf_0279	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Spaf_0282	PWY-6788	cellulose degradation II (fungi)
Spaf_0293	PWY-5482	pyruvate fermentation to acetate II
Spaf_0293	PWY-5485	pyruvate fermentation to acetate IV
Spaf_0293	PWY-5497	purine nucleobases degradation II (anaerobic)
Spaf_0295	PWY-6614	tetrahydrofolate biosynthesis
Spaf_0296	PWY-2161	folate polyglutamylation
Spaf_0297	PWY-5663	tetrahydrobiopterin biosynthesis I
Spaf_0297	PWY-5664	tetrahydrobiopterin biosynthesis II
Spaf_0297	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Spaf_0297	PWY-6703	preQ<sub>0</sub> biosynthesis
Spaf_0297	PWY-6983	tetrahydrobiopterin biosynthesis III
Spaf_0297	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Spaf_0298	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Spaf_0298	PWY-6148	tetrahydromethanopterin biosynthesis
Spaf_0298	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Spaf_0298	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Spaf_0310	PWY-7310	D-glucosaminate degradation
Spaf_0355	PWY-7310	D-glucosaminate degradation
Spaf_0356	PWY-7310	D-glucosaminate degradation
Spaf_0357	PWY-5480	pyruvate fermentation to ethanol I
Spaf_0357	PWY-5485	pyruvate fermentation to acetate IV
Spaf_0357	PWY-5493	reductive monocarboxylic acid cycle
Spaf_0358	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Spaf_0358	PWY-5723	Rubisco shunt
Spaf_0359	PWY-6349	CDP-archaeol biosynthesis
Spaf_0361	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Spaf_0361	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Spaf_0373	PWY-6749	CMP-legionaminate biosynthesis I
Spaf_0375	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Spaf_0375	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Spaf_0377	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Spaf_0377	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Spaf_0432	PWY-6936	seleno-amino acid biosynthesis
Spaf_0432	PWY-7274	D-cycloserine biosynthesis
Spaf_0471	PWY-6902	chitin degradation II
Spaf_0480	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Spaf_0480	PWY-7177	UTP and CTP dephosphorylation II
Spaf_0480	PWY-7185	UTP and CTP dephosphorylation I
Spaf_0481	PWY-1042	glycolysis IV (plant cytosol)
Spaf_0481	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Spaf_0481	PWY-5484	glycolysis II (from fructose 6-phosphate)
Spaf_0481	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Spaf_0481	PWY-7385	1,3-propanediol biosynthesis (engineered)
Spaf_0509	PWY-5101	L-isoleucine biosynthesis II
Spaf_0509	PWY-5103	L-isoleucine biosynthesis III
Spaf_0509	PWY-5104	L-isoleucine biosynthesis IV
Spaf_0509	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Spaf_0509	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Spaf_0509	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Spaf_0509	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Spaf_0510	PWY-5101	L-isoleucine biosynthesis II
Spaf_0510	PWY-5103	L-isoleucine biosynthesis III
Spaf_0510	PWY-5104	L-isoleucine biosynthesis IV
Spaf_0510	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Spaf_0510	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Spaf_0510	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Spaf_0510	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Spaf_0511	PWY-5101	L-isoleucine biosynthesis II
Spaf_0511	PWY-5103	L-isoleucine biosynthesis III
Spaf_0511	PWY-5104	L-isoleucine biosynthesis IV
Spaf_0511	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Spaf_0522	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Spaf_0522	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Spaf_0522	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Spaf_0525	PWY-6823	molybdenum cofactor biosynthesis
Spaf_0525	PWY-6891	thiazole biosynthesis II (Bacillus)
Spaf_0525	PWY-6892	thiazole biosynthesis I (E. coli)
Spaf_0525	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Spaf_0528	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Spaf_0528	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Spaf_0551	PWY-5381	pyridine nucleotide cycling (plants)
Spaf_0551	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Spaf_0583	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Spaf_0583	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Spaf_0584	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Spaf_0584	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Spaf_0584	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Spaf_0584	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Spaf_0588	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Spaf_0598	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Spaf_0598	PWY-2201	folate transformations I
Spaf_0598	PWY-3841	folate transformations II
Spaf_0598	PWY-5030	L-histidine degradation III
Spaf_0598	PWY-5497	purine nucleobases degradation II (anaerobic)
Spaf_0598	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Spaf_0605	PWY-621	sucrose degradation III (sucrose invertase)
Spaf_0617	PWY-1622	formaldehyde assimilation I (serine pathway)
Spaf_0617	PWY-5484	glycolysis II (from fructose 6-phosphate)
Spaf_0644	PWY-5481	pyruvate fermentation to lactate
Spaf_0644	PWY-6901	superpathway of glucose and xylose degradation
Spaf_0651	PWY-7310	D-glucosaminate degradation
Spaf_0674	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Spaf_0677	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Spaf_0677	PWY-6153	autoinducer AI-2 biosynthesis I
Spaf_0677	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
Spaf_0686	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Spaf_0686	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Spaf_0687	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Spaf_0687	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Spaf_0708	PWY-6854	ethylene biosynthesis III (microbes)
Spaf_0712	PWY-4981	L-proline biosynthesis II (from arginine)
Spaf_0714	PWY-4981	L-proline biosynthesis II (from arginine)
Spaf_0714	PWY-4984	urea cycle
Spaf_0714	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Spaf_0719	PWY-6700	queuosine biosynthesis
Spaf_0720	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Spaf_0720	PWY-6855	chitin degradation I (archaea)
Spaf_0720	PWY-6906	chitin derivatives degradation
Spaf_0721	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Spaf_0721	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Spaf_0730	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Spaf_0730	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Spaf_0730	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Spaf_0730	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Spaf_0730	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Spaf_0730	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Spaf_0730	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Spaf_0730	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Spaf_0731	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Spaf_0731	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Spaf_0731	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Spaf_0731	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Spaf_0731	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Spaf_0731	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Spaf_0731	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Spaf_0731	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Spaf_0735	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Spaf_0735	PWY-622	starch biosynthesis
Spaf_0736	PWY-622	starch biosynthesis
Spaf_0738	PWY-622	starch biosynthesis
Spaf_0744	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Spaf_0746	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Spaf_0749	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Spaf_0749	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Spaf_0764	PWY-6749	CMP-legionaminate biosynthesis I
Spaf_0772	PWY-101	photosynthesis light reactions
Spaf_0772	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Spaf_0782	PWY-1042	glycolysis IV (plant cytosol)
Spaf_0782	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Spaf_0782	PWY-5484	glycolysis II (from fructose 6-phosphate)
Spaf_0782	PWY-7385	1,3-propanediol biosynthesis (engineered)
Spaf_0783	PWY-1042	glycolysis IV (plant cytosol)
Spaf_0783	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Spaf_0783	PWY-5484	glycolysis II (from fructose 6-phosphate)
Spaf_0783	PWY-5723	Rubisco shunt
Spaf_0783	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Spaf_0783	PWY-6886	1-butanol autotrophic biosynthesis
Spaf_0783	PWY-6901	superpathway of glucose and xylose degradation
Spaf_0783	PWY-7003	glycerol degradation to butanol
Spaf_0783	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Spaf_0783	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Spaf_0795	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Spaf_0795	PWY-6167	flavin biosynthesis II (archaea)
Spaf_0795	PWY-6168	flavin biosynthesis III (fungi)
Spaf_0816	PWY-5386	methylglyoxal degradation I
Spaf_0838	PWY-7205	CMP phosphorylation
Spaf_0842	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Spaf_0843	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Spaf_0843	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Spaf_0844	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Spaf_0844	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Spaf_0846	PWY-1281	sulfoacetaldehyde degradation I
Spaf_0846	PWY-5482	pyruvate fermentation to acetate II
Spaf_0846	PWY-5485	pyruvate fermentation to acetate IV
Spaf_0846	PWY-5497	purine nucleobases degradation II (anaerobic)
Spaf_0846	PWY-6637	sulfolactate degradation II
Spaf_0855	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Spaf_0855	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Spaf_0855	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Spaf_0856	PWY-842	starch degradation I
Spaf_0859	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Spaf_0859	PWY-6416	quinate degradation II
Spaf_0859	PWY-6707	gallate biosynthesis
Spaf_0860	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Spaf_0861	PWY-6164	3-dehydroquinate biosynthesis I
Spaf_0862	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Spaf_0863	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
Spaf_0866	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Spaf_0868	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Spaf_0868	PWY-6416	quinate degradation II
Spaf_0868	PWY-6707	gallate biosynthesis
Spaf_0870	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Spaf_0871	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Spaf_0872	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Spaf_0914	PWY-4261	glycerol degradation I
Spaf_0915	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Spaf_0927	PWY-3461	L-tyrosine biosynthesis II
Spaf_0927	PWY-3462	L-phenylalanine biosynthesis II
Spaf_0927	PWY-6120	L-tyrosine biosynthesis III
Spaf_0927	PWY-6627	salinosporamide A biosynthesis
Spaf_0937	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Spaf_0937	PWY-5723	Rubisco shunt
Spaf_0939	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Spaf_0942	PWY-4202	arsenate detoxification I (glutaredoxin)
Spaf_0942	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Spaf_0942	PWY-6608	guanosine nucleotides degradation III
Spaf_0942	PWY-6609	adenine and adenosine salvage III
Spaf_0942	PWY-6611	adenine and adenosine salvage V
Spaf_0942	PWY-6620	guanine and guanosine salvage
Spaf_0942	PWY-6627	salinosporamide A biosynthesis
Spaf_0942	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Spaf_0942	PWY-7179	purine deoxyribonucleosides degradation I
Spaf_0942	PWY-7179-1	purine deoxyribonucleosides degradation
Spaf_0945	PWY-4202	arsenate detoxification I (glutaredoxin)
Spaf_0945	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Spaf_0945	PWY-6608	guanosine nucleotides degradation III
Spaf_0945	PWY-6609	adenine and adenosine salvage III
Spaf_0945	PWY-6611	adenine and adenosine salvage V
Spaf_0945	PWY-6620	guanine and guanosine salvage
Spaf_0945	PWY-6627	salinosporamide A biosynthesis
Spaf_0945	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Spaf_0945	PWY-7179	purine deoxyribonucleosides degradation I
Spaf_0945	PWY-7179-1	purine deoxyribonucleosides degradation
Spaf_0953	PWY-5686	UMP biosynthesis
Spaf_0954	PWY-5686	UMP biosynthesis
Spaf_0957	PWY-6502	oxidized GTP and dGTP detoxification
Spaf_0958	PWY-5686	UMP biosynthesis
Spaf_0961	PWY-6871	3-methylbutanol biosynthesis
Spaf_0962	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Spaf_0972	PWY-5057	L-valine degradation II
Spaf_0972	PWY-5076	L-leucine degradation III
Spaf_0972	PWY-5078	L-isoleucine degradation II
Spaf_0972	PWY-5101	L-isoleucine biosynthesis II
Spaf_0972	PWY-5103	L-isoleucine biosynthesis III
Spaf_0972	PWY-5104	L-isoleucine biosynthesis IV
Spaf_0972	PWY-5108	L-isoleucine biosynthesis V
Spaf_0976	PWY-5481	pyruvate fermentation to lactate
Spaf_0976	PWY-6901	superpathway of glucose and xylose degradation
Spaf_0985	PWY-6823	molybdenum cofactor biosynthesis
Spaf_0985	PWY-6891	thiazole biosynthesis II (Bacillus)
Spaf_0985	PWY-6892	thiazole biosynthesis I (E. coli)
Spaf_0985	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Spaf_0990	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Spaf_0990	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Spaf_0990	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Spaf_0992	PWY-1281	sulfoacetaldehyde degradation I
Spaf_0992	PWY-5482	pyruvate fermentation to acetate II
Spaf_0992	PWY-5485	pyruvate fermentation to acetate IV
Spaf_0992	PWY-5497	purine nucleobases degradation II (anaerobic)
Spaf_0992	PWY-6637	sulfolactate degradation II
Spaf_0997	PWY-6749	CMP-legionaminate biosynthesis I
Spaf_1002	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Spaf_1002	PWY-2161	folate polyglutamylation
Spaf_1002	PWY-2201	folate transformations I
Spaf_1002	PWY-3841	folate transformations II
Spaf_1027	PWY-5101	L-isoleucine biosynthesis II
Spaf_1027	PWY-5103	L-isoleucine biosynthesis III
Spaf_1027	PWY-5104	L-isoleucine biosynthesis IV
Spaf_1027	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Spaf_1029	PWY-7199	pyrimidine deoxyribonucleosides salvage
Spaf_1033	PWY-1622	formaldehyde assimilation I (serine pathway)
Spaf_1033	PWY-181	photorespiration
Spaf_1033	PWY-2161	folate polyglutamylation
Spaf_1033	PWY-2201	folate transformations I
Spaf_1033	PWY-3661	glycine betaine degradation I
Spaf_1033	PWY-3661-1	glycine betaine degradation II (mammalian)
Spaf_1033	PWY-3841	folate transformations II
Spaf_1033	PWY-5497	purine nucleobases degradation II (anaerobic)
Spaf_1039	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Spaf_1041	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Spaf_1041	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Spaf_1041	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Spaf_1041	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Spaf_1045	PWY-4381	fatty acid biosynthesis initiation I
Spaf_1059	PWY-6984	lipoate salvage II
Spaf_1059	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Spaf_1059	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Spaf_1060	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Spaf_1060	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Spaf_1076	PWY-2941	L-lysine biosynthesis II
Spaf_1076	PWY-2942	L-lysine biosynthesis III
Spaf_1076	PWY-5097	L-lysine biosynthesis VI
Spaf_1077	PWY-2941	L-lysine biosynthesis II
Spaf_1077	PWY-2942	L-lysine biosynthesis III
Spaf_1077	PWY-5097	L-lysine biosynthesis VI
Spaf_1077	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Spaf_1077	PWY-6559	spermidine biosynthesis II
Spaf_1077	PWY-6562	norspermidine biosynthesis
Spaf_1077	PWY-7153	grixazone biosynthesis
Spaf_1077	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Spaf_1147	PWY-3841	folate transformations II
Spaf_1147	PWY-6614	tetrahydrofolate biosynthesis
Spaf_1148	PWY-3841	folate transformations II
Spaf_1148	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Spaf_1148	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Spaf_1148	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Spaf_1148	PWY-7199	pyrimidine deoxyribonucleosides salvage
Spaf_1148	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Spaf_1149	PWY-2723	trehalose degradation V
Spaf_1149	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Spaf_1149	PWY-5661	GDP-glucose biosynthesis
Spaf_1149	PWY-7238	sucrose biosynthesis II
Spaf_1149	PWY-7385	1,3-propanediol biosynthesis (engineered)
Spaf_1153	PWY-2941	L-lysine biosynthesis II
Spaf_1153	PWY-2942	L-lysine biosynthesis III
Spaf_1153	PWY-5097	L-lysine biosynthesis VI
Spaf_1158	PWY-7310	D-glucosaminate degradation
Spaf_1160	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Spaf_1160	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Spaf_1164	PWY-6829	tRNA methylation (yeast)
Spaf_1164	PWY-7285	methylwyosine biosynthesis
Spaf_1164	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Spaf_1176	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Spaf_1176	PWY-5686	UMP biosynthesis
Spaf_1176	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Spaf_1177	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Spaf_1177	PWY-5686	UMP biosynthesis
Spaf_1177	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Spaf_1178	PWY-5686	UMP biosynthesis
Spaf_1180	PWY-7183	pyrimidine nucleobases salvage I
Spaf_1220	PWY-6556	pyrimidine ribonucleosides salvage II
Spaf_1220	PWY-7181	pyrimidine deoxyribonucleosides degradation
Spaf_1220	PWY-7193	pyrimidine ribonucleosides salvage I
Spaf_1220	PWY-7199	pyrimidine deoxyribonucleosides salvage
Spaf_1221	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Spaf_1222	PWY-7181	pyrimidine deoxyribonucleosides degradation
Spaf_1224	PWY-3961	phosphopantothenate biosynthesis II
Spaf_1245	PWY-3341	L-proline biosynthesis III
Spaf_1245	PWY-4981	L-proline biosynthesis II (from arginine)
Spaf_1245	PWY-6344	L-ornithine degradation II (Stickland reaction)
Spaf_1252	PWY-7310	D-glucosaminate degradation
Spaf_1255	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Spaf_1255	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Spaf_1256	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Spaf_1256	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Spaf_1260	PWY-7310	D-glucosaminate degradation
Spaf_1266	PWY-5484	glycolysis II (from fructose 6-phosphate)
Spaf_1269	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Spaf_1269	PWY-6549	L-glutamine biosynthesis III
Spaf_1269	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Spaf_1269	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Spaf_1271	PWY-6823	molybdenum cofactor biosynthesis
Spaf_1271	PWY-6891	thiazole biosynthesis II (Bacillus)
Spaf_1271	PWY-6892	thiazole biosynthesis I (E. coli)
Spaf_1271	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Spaf_1281	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Spaf_1281	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Spaf_1283	PWY-702	L-methionine biosynthesis II
Spaf_1294	PWY-842	starch degradation I
Spaf_1297	PWY-4983	L-citrulline-nitric oxide cycle
Spaf_1297	PWY-4984	urea cycle
Spaf_1297	PWY-5	canavanine biosynthesis
Spaf_1297	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Spaf_1297	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Spaf_1299	PWY-4983	L-citrulline-nitric oxide cycle
Spaf_1299	PWY-4984	urea cycle
Spaf_1299	PWY-5	canavanine biosynthesis
Spaf_1299	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Spaf_1299	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Spaf_1312	PWY-3821	galactose degradation III
Spaf_1312	PWY-6317	galactose degradation I (Leloir pathway)
Spaf_1312	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Spaf_1312	PWY-6527	stachyose degradation
Spaf_1312	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Spaf_1312	PWY-7344	UDP-D-galactose biosynthesis
Spaf_1313	PWY-6317	galactose degradation I (Leloir pathway)
Spaf_1313	PWY-6527	stachyose degradation
Spaf_1315	PWY-3821	galactose degradation III
Spaf_1315	PWY-6317	galactose degradation I (Leloir pathway)
Spaf_1315	PWY-6527	stachyose degradation
Spaf_1317	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Spaf_1321	PWY-6527	stachyose degradation
Spaf_1324	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Spaf_1324	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Spaf_1343	PWY-7193	pyrimidine ribonucleosides salvage I
Spaf_1350	PWY-3221	dTDP-L-rhamnose biosynthesis II
Spaf_1350	PWY-6808	dTDP-D-forosamine biosynthesis
Spaf_1350	PWY-6942	dTDP-D-desosamine biosynthesis
Spaf_1350	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Spaf_1350	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Spaf_1350	PWY-6974	dTDP-L-olivose biosynthesis
Spaf_1350	PWY-6976	dTDP-L-mycarose biosynthesis
Spaf_1350	PWY-7104	dTDP-L-megosamine biosynthesis
Spaf_1350	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Spaf_1350	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Spaf_1350	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Spaf_1350	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Spaf_1350	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Spaf_1350	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Spaf_1350	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Spaf_1350	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Spaf_1352	PWY-3221	dTDP-L-rhamnose biosynthesis II
Spaf_1352	PWY-6808	dTDP-D-forosamine biosynthesis
Spaf_1352	PWY-6942	dTDP-D-desosamine biosynthesis
Spaf_1352	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Spaf_1352	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Spaf_1352	PWY-6974	dTDP-L-olivose biosynthesis
Spaf_1352	PWY-6976	dTDP-L-mycarose biosynthesis
Spaf_1352	PWY-7104	dTDP-L-megosamine biosynthesis
Spaf_1352	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Spaf_1352	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Spaf_1352	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Spaf_1352	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Spaf_1352	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Spaf_1352	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Spaf_1352	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Spaf_1352	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Spaf_1355	PWY-5663	tetrahydrobiopterin biosynthesis I
Spaf_1355	PWY-5664	tetrahydrobiopterin biosynthesis II
Spaf_1355	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Spaf_1355	PWY-6703	preQ<sub>0</sub> biosynthesis
Spaf_1355	PWY-6983	tetrahydrobiopterin biosynthesis III
Spaf_1355	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Spaf_1358	PWY-6609	adenine and adenosine salvage III
Spaf_1358	PWY-6611	adenine and adenosine salvage V
Spaf_1358	PWY-7179	purine deoxyribonucleosides degradation I
Spaf_1358	PWY-7179-1	purine deoxyribonucleosides degradation
Spaf_1362	PWY-6605	adenine and adenosine salvage II
Spaf_1362	PWY-6610	adenine and adenosine salvage IV
Spaf_1373	PWY-2781	<i>cis</i>-zeatin biosynthesis
Spaf_1410	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Spaf_1415	PWY-1042	glycolysis IV (plant cytosol)
Spaf_1415	PWY-1622	formaldehyde assimilation I (serine pathway)
Spaf_1415	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Spaf_1415	PWY-5484	glycolysis II (from fructose 6-phosphate)
Spaf_1415	PWY-5723	Rubisco shunt
Spaf_1415	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Spaf_1415	PWY-6886	1-butanol autotrophic biosynthesis
Spaf_1415	PWY-6901	superpathway of glucose and xylose degradation
Spaf_1415	PWY-7003	glycerol degradation to butanol
Spaf_1415	PWY-7124	ethylene biosynthesis V (engineered)
Spaf_1415	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Spaf_1438	PWY-1042	glycolysis IV (plant cytosol)
Spaf_1438	PWY-5484	glycolysis II (from fructose 6-phosphate)
Spaf_1438	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Spaf_1438	PWY-7003	glycerol degradation to butanol
Spaf_1440	PWY-1622	formaldehyde assimilation I (serine pathway)
Spaf_1440	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Spaf_1440	PWY-5913	TCA cycle VI (obligate autotrophs)
Spaf_1440	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Spaf_1440	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Spaf_1440	PWY-6549	L-glutamine biosynthesis III
Spaf_1440	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Spaf_1440	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Spaf_1440	PWY-7124	ethylene biosynthesis V (engineered)
Spaf_1452	PWY-4081	glutathione redox reactions I
Spaf_1453	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Spaf_1453	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Spaf_1454	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Spaf_1454	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Spaf_1454	PWY-6936	seleno-amino acid biosynthesis
Spaf_1454	PWY-702	L-methionine biosynthesis II
Spaf_1471	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Spaf_1505	PWY-7039	phosphatidate metabolism, as a signaling molecule
Spaf_1536	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Spaf_1536	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Spaf_1536	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Spaf_1536	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Spaf_1536	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Spaf_1536	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Spaf_1546	PWY-7183	pyrimidine nucleobases salvage I
Spaf_1548	PWY-6936	seleno-amino acid biosynthesis
Spaf_1559	PWY-7310	D-glucosaminate degradation
Spaf_1591	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Spaf_1592	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Spaf_1592	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Spaf_1594	PWY-2941	L-lysine biosynthesis II
Spaf_1594	PWY-2942	L-lysine biosynthesis III
Spaf_1594	PWY-5097	L-lysine biosynthesis VI
Spaf_1606	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Spaf_1606	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Spaf_1615	PWY-7310	D-glucosaminate degradation
Spaf_1657	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Spaf_1666	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Spaf_1667	PWY-6012	acyl carrier protein metabolism I
Spaf_1667	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Spaf_1668	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Spaf_1668	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Spaf_1668	PWY-6164	3-dehydroquinate biosynthesis I
Spaf_1675	PWY-3861	mannitol degradation II
Spaf_1675	PWY-3881	mannitol biosynthesis
Spaf_1675	PWY-5659	GDP-mannose biosynthesis
Spaf_1675	PWY-7456	mannan degradation
Spaf_1675	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Spaf_1682	PWY-7310	D-glucosaminate degradation
Spaf_1684	PWY-621	sucrose degradation III (sucrose invertase)
Spaf_1715	PWY-5028	L-histidine degradation II
Spaf_1715	PWY-5030	L-histidine degradation III
Spaf_1716	PWY-5028	L-histidine degradation II
Spaf_1716	PWY-5030	L-histidine degradation III
Spaf_1717	PWY-5030	L-histidine degradation III
Spaf_1718	PWY-5030	L-histidine degradation III
Spaf_1718	PWY-5497	purine nucleobases degradation II (anaerobic)
Spaf_1719	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Spaf_1719	PWY-2161	folate polyglutamylation
Spaf_1719	PWY-2201	folate transformations I
Spaf_1719	PWY-3841	folate transformations II
Spaf_1722	PWY-5028	L-histidine degradation II
Spaf_1722	PWY-5030	L-histidine degradation III
Spaf_1725	PWY-2201	folate transformations I
Spaf_1725	PWY-3841	folate transformations II
Spaf_1726	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Spaf_1726	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Spaf_1726	PWY-6936	seleno-amino acid biosynthesis
Spaf_1726	PWY-702	L-methionine biosynthesis II
Spaf_1765	PWY-5958	acridone alkaloid biosynthesis
Spaf_1765	PWY-6543	4-aminobenzoate biosynthesis
Spaf_1765	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Spaf_1765	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Spaf_1765	PWY-6722	candicidin biosynthesis
Spaf_1774	PWY-6807	xyloglucan degradation II (exoglucanase)
Spaf_1779	PWY-2721	trehalose degradation III
Spaf_1779	PWY-2722	trehalose degradation IV
Spaf_1779	PWY-6317	galactose degradation I (Leloir pathway)
Spaf_1779	PWY-7459	kojibiose degradation
Spaf_1817	PWY-5480	pyruvate fermentation to ethanol I
Spaf_1817	PWY-5485	pyruvate fermentation to acetate IV
Spaf_1817	PWY-5493	reductive monocarboxylic acid cycle
Spaf_1821	PWY-6174	mevalonate pathway II (archaea)
Spaf_1821	PWY-7391	isoprene biosynthesis II (engineered)
Spaf_1821	PWY-7524	mevalonate pathway III (archaea)
Spaf_1821	PWY-922	mevalonate pathway I
Spaf_1822	PWY-6174	mevalonate pathway II (archaea)
Spaf_1822	PWY-7391	isoprene biosynthesis II (engineered)
Spaf_1822	PWY-7524	mevalonate pathway III (archaea)
Spaf_1822	PWY-922	mevalonate pathway I
Spaf_1825	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
Spaf_1825	PWY-6174	mevalonate pathway II (archaea)
Spaf_1825	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
Spaf_1825	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
Spaf_1825	PWY-7102	bisabolene biosynthesis
Spaf_1825	PWY-7391	isoprene biosynthesis II (engineered)
Spaf_1825	PWY-7524	mevalonate pathway III (archaea)
Spaf_1825	PWY-7560	methylerythritol phosphate pathway II
Spaf_1825	PWY-922	mevalonate pathway I
Spaf_1826	PWY-7391	isoprene biosynthesis II (engineered)
Spaf_1826	PWY-922	mevalonate pathway I
Spaf_1827	PWY-7391	isoprene biosynthesis II (engineered)
Spaf_1827	PWY-922	mevalonate pathway I
Spaf_1828	PWY-3821	galactose degradation III
Spaf_1828	PWY-6174	mevalonate pathway II (archaea)
Spaf_1828	PWY-6317	galactose degradation I (Leloir pathway)
Spaf_1828	PWY-6527	stachyose degradation
Spaf_1828	PWY-7391	isoprene biosynthesis II (engineered)
Spaf_1828	PWY-922	mevalonate pathway I
Spaf_1854	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Spaf_1854	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Spaf_1891	PWY-381	nitrate reduction II (assimilatory)
Spaf_1891	PWY-5675	nitrate reduction V (assimilatory)
Spaf_1891	PWY-6549	L-glutamine biosynthesis III
Spaf_1891	PWY-6963	ammonia assimilation cycle I
Spaf_1891	PWY-6964	ammonia assimilation cycle II
Spaf_1894	PWY-1042	glycolysis IV (plant cytosol)
Spaf_1894	PWY-5484	glycolysis II (from fructose 6-phosphate)
Spaf_1894	PWY-6886	1-butanol autotrophic biosynthesis
Spaf_1894	PWY-6901	superpathway of glucose and xylose degradation
Spaf_1894	PWY-7003	glycerol degradation to butanol
Spaf_1898	PWY-1042	glycolysis IV (plant cytosol)
Spaf_1898	PWY-5484	glycolysis II (from fructose 6-phosphate)
Spaf_1898	PWY-6901	superpathway of glucose and xylose degradation
Spaf_1898	PWY-7003	glycerol degradation to butanol
Spaf_1907	PWY-6898	thiamin salvage III
Spaf_1907	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Spaf_1907	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Spaf_1908	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Spaf_1908	PWY-5723	Rubisco shunt
Spaf_1936	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Spaf_1944	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Spaf_1944	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Spaf_1944	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Spaf_1944	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Spaf_1952	PWY-5667	CDP-diacylglycerol biosynthesis I
Spaf_1952	PWY-5981	CDP-diacylglycerol biosynthesis III
Spaf_1954	PWY-3801	sucrose degradation II (sucrose synthase)
Spaf_1954	PWY-6527	stachyose degradation
Spaf_1954	PWY-6981	chitin biosynthesis
Spaf_1954	PWY-7238	sucrose biosynthesis II
Spaf_1954	PWY-7343	UDP-glucose biosynthesis
Spaf_1958	PWY-2941	L-lysine biosynthesis II
Spaf_1959	PWY-2941	L-lysine biosynthesis II
Spaf_1967	PWY-3801	sucrose degradation II (sucrose synthase)
Spaf_1967	PWY-5054	sorbitol biosynthesis I
Spaf_1967	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Spaf_1967	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Spaf_1967	PWY-5659	GDP-mannose biosynthesis
Spaf_1967	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Spaf_1967	PWY-621	sucrose degradation III (sucrose invertase)
Spaf_1967	PWY-622	starch biosynthesis
Spaf_1967	PWY-6531	mannitol cycle
Spaf_1967	PWY-6981	chitin biosynthesis
Spaf_1967	PWY-7238	sucrose biosynthesis II
Spaf_1967	PWY-7347	sucrose biosynthesis III
Spaf_1967	PWY-7385	1,3-propanediol biosynthesis (engineered)
Spaf_1973	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Spaf_1988	PWY-6807	xyloglucan degradation II (exoglucanase)
Spaf_2005	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Spaf_2020	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Spaf_2020	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Spaf_2020	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Spaf_2025	PWY-2161	folate polyglutamylation
Spaf_2047	PWY-5941	glycogen degradation II (eukaryotic)
Spaf_2047	PWY-622	starch biosynthesis
Spaf_2047	PWY-6731	starch degradation III
Spaf_2047	PWY-6737	starch degradation V
Spaf_2047	PWY-7238	sucrose biosynthesis II
Spaf_2048	PWY-5941	glycogen degradation II (eukaryotic)
Spaf_2048	PWY-6724	starch degradation II
Spaf_2048	PWY-6737	starch degradation V
Spaf_2048	PWY-7238	sucrose biosynthesis II
Spaf_2057	PWY-842	starch degradation I
Spaf_2095	PWY-5269	cardiolipin biosynthesis II
Spaf_2095	PWY-5668	cardiolipin biosynthesis I
Spaf_2101	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Spaf_2101	PWY-6596	adenosine nucleotides degradation I
Spaf_2101	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
