M5005_Spy_0012	PWY-6599	guanine and guanosine salvage II
M5005_Spy_0012	PWY-6609	adenine and adenosine salvage III
M5005_Spy_0012	PWY-6610	adenine and adenosine salvage IV
M5005_Spy_0012	PWY-6620	guanine and guanosine salvage
M5005_Spy_0022	PWY-6123	inosine-5'-phosphate biosynthesis I
M5005_Spy_0022	PWY-6124	inosine-5'-phosphate biosynthesis II
M5005_Spy_0022	PWY-7234	inosine-5'-phosphate biosynthesis III
M5005_Spy_0024	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
M5005_Spy_0024	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
M5005_Spy_0024	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
M5005_Spy_0024	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
M5005_Spy_0025	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
M5005_Spy_0025	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
M5005_Spy_0025	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
M5005_Spy_0026	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
M5005_Spy_0026	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
M5005_Spy_0027	PWY-6123	inosine-5'-phosphate biosynthesis I
M5005_Spy_0027	PWY-6124	inosine-5'-phosphate biosynthesis II
M5005_Spy_0027	PWY-7234	inosine-5'-phosphate biosynthesis III
M5005_Spy_0029	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
M5005_Spy_0029	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
M5005_Spy_0029	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
M5005_Spy_0033	PWY-6123	inosine-5'-phosphate biosynthesis I
M5005_Spy_0033	PWY-6124	inosine-5'-phosphate biosynthesis II
M5005_Spy_0033	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
M5005_Spy_0033	PWY-7234	inosine-5'-phosphate biosynthesis III
M5005_Spy_0039	PWY-3162	L-tryptophan degradation V (side chain pathway)
M5005_Spy_0039	PWY-5057	L-valine degradation II
M5005_Spy_0039	PWY-5076	L-leucine degradation III
M5005_Spy_0039	PWY-5078	L-isoleucine degradation II
M5005_Spy_0039	PWY-5079	L-phenylalanine degradation III
M5005_Spy_0039	PWY-5082	L-methionine degradation III
M5005_Spy_0039	PWY-5162	2-oxopentenoate degradation
M5005_Spy_0039	PWY-5436	L-threonine degradation IV
M5005_Spy_0039	PWY-5480	pyruvate fermentation to ethanol I
M5005_Spy_0039	PWY-5486	pyruvate fermentation to ethanol II
M5005_Spy_0039	PWY-5751	phenylethanol biosynthesis
M5005_Spy_0039	PWY-6028	acetoin degradation
M5005_Spy_0039	PWY-6313	serotonin degradation
M5005_Spy_0039	PWY-6333	acetaldehyde biosynthesis I
M5005_Spy_0039	PWY-6342	noradrenaline and adrenaline degradation
M5005_Spy_0039	PWY-6587	pyruvate fermentation to ethanol III
M5005_Spy_0039	PWY-6802	salidroside biosynthesis
M5005_Spy_0039	PWY-6871	3-methylbutanol biosynthesis
M5005_Spy_0039	PWY-7013	L-1,2-propanediol degradation
M5005_Spy_0039	PWY-7085	triethylamine degradation
M5005_Spy_0039	PWY-7111	pyruvate fermentation to isobutanol (engineered)
M5005_Spy_0039	PWY-7118	chitin degradation to ethanol
M5005_Spy_0039	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
M5005_Spy_0039	PWY-7396	butanol and isobutanol biosynthesis (engineered)
M5005_Spy_0039	PWY-7557	dehydrodiconiferyl alcohol degradation
M5005_Spy_0065	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
M5005_Spy_0094	PWY-5482	pyruvate fermentation to acetate II
M5005_Spy_0094	PWY-5485	pyruvate fermentation to acetate IV
M5005_Spy_0094	PWY-5497	purine nucleobases degradation II (anaerobic)
M5005_Spy_0096	PWY-3341	L-proline biosynthesis III
M5005_Spy_0096	PWY-4981	L-proline biosynthesis II (from arginine)
M5005_Spy_0096	PWY-6344	L-ornithine degradation II (Stickland reaction)
M5005_Spy_0124	PWY-7310	D-glucosaminate degradation
M5005_Spy_0131	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
M5005_Spy_0132	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
M5005_Spy_0136	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
M5005_Spy_0149	PWY-7310	D-glucosaminate degradation
M5005_Spy_0151	PWY-5686	UMP biosynthesis
M5005_Spy_0152	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
M5005_Spy_0155	PWY-7310	D-glucosaminate degradation
M5005_Spy_0170	PWY-5316	nicotine biosynthesis
M5005_Spy_0170	PWY-5381	pyridine nucleotide cycling (plants)
M5005_Spy_0170	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
M5005_Spy_0170	PWY-7342	superpathway of nicotine biosynthesis
M5005_Spy_0175	PWY-6700	queuosine biosynthesis
M5005_Spy_0185	PWY-3801	sucrose degradation II (sucrose synthase)
M5005_Spy_0185	PWY-5054	sorbitol biosynthesis I
M5005_Spy_0185	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
M5005_Spy_0185	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
M5005_Spy_0185	PWY-5659	GDP-mannose biosynthesis
M5005_Spy_0185	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
M5005_Spy_0185	PWY-621	sucrose degradation III (sucrose invertase)
M5005_Spy_0185	PWY-622	starch biosynthesis
M5005_Spy_0185	PWY-6531	mannitol cycle
M5005_Spy_0185	PWY-6981	chitin biosynthesis
M5005_Spy_0185	PWY-7238	sucrose biosynthesis II
M5005_Spy_0185	PWY-7347	sucrose biosynthesis III
M5005_Spy_0185	PWY-7385	1,3-propanediol biosynthesis (engineered)
M5005_Spy_0192	PWY-3801	sucrose degradation II (sucrose synthase)
M5005_Spy_0192	PWY-6527	stachyose degradation
M5005_Spy_0192	PWY-6981	chitin biosynthesis
M5005_Spy_0192	PWY-7238	sucrose biosynthesis II
M5005_Spy_0192	PWY-7343	UDP-glucose biosynthesis
M5005_Spy_0193	PWY-5667	CDP-diacylglycerol biosynthesis I
M5005_Spy_0193	PWY-5981	CDP-diacylglycerol biosynthesis III
M5005_Spy_0194	PWY-5667	CDP-diacylglycerol biosynthesis I
M5005_Spy_0194	PWY-5981	CDP-diacylglycerol biosynthesis III
M5005_Spy_0201	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
M5005_Spy_0201	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
M5005_Spy_0201	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
M5005_Spy_0201	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
M5005_Spy_0203	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
M5005_Spy_0224	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
M5005_Spy_0224	PWY-5723	Rubisco shunt
M5005_Spy_0225	PWY-6898	thiamin salvage III
M5005_Spy_0225	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
M5005_Spy_0225	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
M5005_Spy_0233	PWY-1042	glycolysis IV (plant cytosol)
M5005_Spy_0233	PWY-5484	glycolysis II (from fructose 6-phosphate)
M5005_Spy_0233	PWY-6901	superpathway of glucose and xylose degradation
M5005_Spy_0233	PWY-7003	glycerol degradation to butanol
M5005_Spy_0240	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
M5005_Spy_0240	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
M5005_Spy_0240	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
M5005_Spy_0244	PWY-6823	molybdenum cofactor biosynthesis
M5005_Spy_0244	PWY-6891	thiazole biosynthesis II (Bacillus)
M5005_Spy_0244	PWY-6892	thiazole biosynthesis I (E. coli)
M5005_Spy_0244	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
M5005_Spy_0248	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
M5005_Spy_0248	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
M5005_Spy_0263	PWY-5381	pyridine nucleotide cycling (plants)
M5005_Spy_0263	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
M5005_Spy_0290	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
M5005_Spy_0290	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
M5005_Spy_0303	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
M5005_Spy_0303	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
M5005_Spy_0304	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
M5005_Spy_0327	PWY-7183	pyrimidine nucleobases salvage I
M5005_Spy_0330	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
M5005_Spy_0330	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
M5005_Spy_0330	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
M5005_Spy_0330	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
M5005_Spy_0330	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
M5005_Spy_0330	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
M5005_Spy_0347	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
M5005_Spy_0347	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
M5005_Spy_0347	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
M5005_Spy_0347	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
M5005_Spy_0347	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
M5005_Spy_0347	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
M5005_Spy_0347	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
M5005_Spy_0347	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
M5005_Spy_0349	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
M5005_Spy_0349	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
M5005_Spy_0349	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
M5005_Spy_0349	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
M5005_Spy_0349	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
M5005_Spy_0349	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
M5005_Spy_0349	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
M5005_Spy_0349	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
M5005_Spy_0362	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
M5005_Spy_0365	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
M5005_Spy_0365	PWY-6153	autoinducer AI-2 biosynthesis I
M5005_Spy_0365	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
M5005_Spy_0389	PWY-7039	phosphatidate metabolism, as a signaling molecule
M5005_Spy_0441	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
M5005_Spy_0443	PWY-5199	factor 420 polyglutamylation
M5005_Spy_0445	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
M5005_Spy_0445	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
M5005_Spy_0449	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
M5005_Spy_0475	PWY-7310	D-glucosaminate degradation
M5005_Spy_0505	PWY-1622	formaldehyde assimilation I (serine pathway)
M5005_Spy_0505	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
M5005_Spy_0505	PWY-5913	TCA cycle VI (obligate autotrophs)
M5005_Spy_0505	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
M5005_Spy_0505	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
M5005_Spy_0505	PWY-6549	L-glutamine biosynthesis III
M5005_Spy_0505	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
M5005_Spy_0505	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
M5005_Spy_0505	PWY-7124	ethylene biosynthesis V (engineered)
M5005_Spy_0509	PWY-1042	glycolysis IV (plant cytosol)
M5005_Spy_0509	PWY-5484	glycolysis II (from fructose 6-phosphate)
M5005_Spy_0509	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
M5005_Spy_0509	PWY-7003	glycerol degradation to butanol
M5005_Spy_0518	PWY-6986	alginate degradation
M5005_Spy_0521	PWY-7310	D-glucosaminate degradation
M5005_Spy_0527	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
M5005_Spy_0527	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
M5005_Spy_0527	PWY-7242	D-fructuronate degradation
M5005_Spy_0527	PWY-7310	D-glucosaminate degradation
M5005_Spy_0549	PWY-3461	L-tyrosine biosynthesis II
M5005_Spy_0549	PWY-3462	L-phenylalanine biosynthesis II
M5005_Spy_0549	PWY-6120	L-tyrosine biosynthesis III
M5005_Spy_0549	PWY-6627	salinosporamide A biosynthesis
M5005_Spy_0556	PWY-1042	glycolysis IV (plant cytosol)
M5005_Spy_0556	PWY-1622	formaldehyde assimilation I (serine pathway)
M5005_Spy_0556	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
M5005_Spy_0556	PWY-5484	glycolysis II (from fructose 6-phosphate)
M5005_Spy_0556	PWY-5723	Rubisco shunt
M5005_Spy_0556	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
M5005_Spy_0556	PWY-6886	1-butanol autotrophic biosynthesis
M5005_Spy_0556	PWY-6901	superpathway of glucose and xylose degradation
M5005_Spy_0556	PWY-7003	glycerol degradation to butanol
M5005_Spy_0556	PWY-7124	ethylene biosynthesis V (engineered)
M5005_Spy_0556	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
M5005_Spy_0574	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
M5005_Spy_0574	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
M5005_Spy_0574	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
M5005_Spy_0579	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
M5005_Spy_0581	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
M5005_Spy_0584	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
M5005_Spy_0584	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
M5005_Spy_0618	PWY-7205	CMP phosphorylation
M5005_Spy_0624	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
M5005_Spy_0624	PWY-6416	quinate degradation II
M5005_Spy_0624	PWY-6707	gallate biosynthesis
M5005_Spy_0625	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
M5005_Spy_0627	PWY-4081	glutathione redox reactions I
M5005_Spy_0628	PWY-2161	folate polyglutamylation
M5005_Spy_0630	PWY-6823	molybdenum cofactor biosynthesis
M5005_Spy_0630	PWY-6891	thiazole biosynthesis II (Bacillus)
M5005_Spy_0630	PWY-6892	thiazole biosynthesis I (E. coli)
M5005_Spy_0630	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
M5005_Spy_0639	PWY-7183	pyrimidine nucleobases salvage I
M5005_Spy_0641	PWY-5686	UMP biosynthesis
M5005_Spy_0642	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
M5005_Spy_0642	PWY-5686	UMP biosynthesis
M5005_Spy_0642	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
M5005_Spy_0643	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
M5005_Spy_0643	PWY-5686	UMP biosynthesis
M5005_Spy_0643	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
M5005_Spy_0652	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
M5005_Spy_0652	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
M5005_Spy_0656	PWY-6829	tRNA methylation (yeast)
M5005_Spy_0656	PWY-7285	methylwyosine biosynthesis
M5005_Spy_0656	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
M5005_Spy_0657	PWY-101	photosynthesis light reactions
M5005_Spy_0657	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
M5005_Spy_0658	PWY-7310	D-glucosaminate degradation
M5005_Spy_0659	PWY-6654	phosphopantothenate biosynthesis III
M5005_Spy_0661	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
M5005_Spy_0661	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
M5005_Spy_0662	PWY-7310	D-glucosaminate degradation
M5005_Spy_0670	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
M5005_Spy_0670	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
M5005_Spy_0670	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
M5005_Spy_0670	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
M5005_Spy_0670	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
M5005_Spy_0670	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
M5005_Spy_0670	PWY-7205	CMP phosphorylation
M5005_Spy_0670	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
M5005_Spy_0670	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
M5005_Spy_0670	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
M5005_Spy_0670	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
M5005_Spy_0670	PWY-7224	purine deoxyribonucleosides salvage
M5005_Spy_0670	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
M5005_Spy_0670	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
M5005_Spy_0682	PWY-3821	galactose degradation III
M5005_Spy_0682	PWY-6174	mevalonate pathway II (archaea)
M5005_Spy_0682	PWY-6317	galactose degradation I (Leloir pathway)
M5005_Spy_0682	PWY-6527	stachyose degradation
M5005_Spy_0682	PWY-7391	isoprene biosynthesis II (engineered)
M5005_Spy_0682	PWY-922	mevalonate pathway I
M5005_Spy_0683	PWY-7391	isoprene biosynthesis II (engineered)
M5005_Spy_0683	PWY-922	mevalonate pathway I
M5005_Spy_0684	PWY-7391	isoprene biosynthesis II (engineered)
M5005_Spy_0684	PWY-922	mevalonate pathway I
M5005_Spy_0685	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
M5005_Spy_0685	PWY-6174	mevalonate pathway II (archaea)
M5005_Spy_0685	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
M5005_Spy_0685	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
M5005_Spy_0685	PWY-7102	bisabolene biosynthesis
M5005_Spy_0685	PWY-7391	isoprene biosynthesis II (engineered)
M5005_Spy_0685	PWY-7524	mevalonate pathway III (archaea)
M5005_Spy_0685	PWY-7560	methylerythritol phosphate pathway II
M5005_Spy_0685	PWY-922	mevalonate pathway I
M5005_Spy_0686	PWY-6174	mevalonate pathway II (archaea)
M5005_Spy_0686	PWY-7391	isoprene biosynthesis II (engineered)
M5005_Spy_0686	PWY-7524	mevalonate pathway III (archaea)
M5005_Spy_0686	PWY-922	mevalonate pathway I
M5005_Spy_0687	PWY-6174	mevalonate pathway II (archaea)
M5005_Spy_0687	PWY-7391	isoprene biosynthesis II (engineered)
M5005_Spy_0687	PWY-7524	mevalonate pathway III (archaea)
M5005_Spy_0687	PWY-922	mevalonate pathway I
M5005_Spy_0688	PWY-3841	folate transformations II
M5005_Spy_0688	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
M5005_Spy_0688	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
M5005_Spy_0688	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
M5005_Spy_0688	PWY-7199	pyrimidine deoxyribonucleosides salvage
M5005_Spy_0688	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
M5005_Spy_0689	PWY-3841	folate transformations II
M5005_Spy_0689	PWY-6614	tetrahydrofolate biosynthesis
M5005_Spy_0695	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
M5005_Spy_0695	PWY-5723	Rubisco shunt
M5005_Spy_0696	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
M5005_Spy_0697	PWY-4202	arsenate detoxification I (glutaredoxin)
M5005_Spy_0697	PWY-4621	arsenate detoxification II (glutaredoxin)
M5005_Spy_0698	PWY-4202	arsenate detoxification I (glutaredoxin)
M5005_Spy_0698	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
M5005_Spy_0698	PWY-6608	guanosine nucleotides degradation III
M5005_Spy_0698	PWY-6609	adenine and adenosine salvage III
M5005_Spy_0698	PWY-6611	adenine and adenosine salvage V
M5005_Spy_0698	PWY-6620	guanine and guanosine salvage
M5005_Spy_0698	PWY-6627	salinosporamide A biosynthesis
M5005_Spy_0698	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
M5005_Spy_0698	PWY-7179	purine deoxyribonucleosides degradation I
M5005_Spy_0698	PWY-7179-1	purine deoxyribonucleosides degradation
M5005_Spy_0699	PWY-4202	arsenate detoxification I (glutaredoxin)
M5005_Spy_0699	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
M5005_Spy_0699	PWY-6608	guanosine nucleotides degradation III
M5005_Spy_0699	PWY-6609	adenine and adenosine salvage III
M5005_Spy_0699	PWY-6611	adenine and adenosine salvage V
M5005_Spy_0699	PWY-6620	guanine and guanosine salvage
M5005_Spy_0699	PWY-6627	salinosporamide A biosynthesis
M5005_Spy_0699	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
M5005_Spy_0699	PWY-7179	purine deoxyribonucleosides degradation I
M5005_Spy_0699	PWY-7179-1	purine deoxyribonucleosides degradation
M5005_Spy_0703	PWY-5686	UMP biosynthesis
M5005_Spy_0704	PWY-5686	UMP biosynthesis
M5005_Spy_0705	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
M5005_Spy_0709	PWY-5686	UMP biosynthesis
M5005_Spy_0713	PWY-5057	L-valine degradation II
M5005_Spy_0713	PWY-5076	L-leucine degradation III
M5005_Spy_0713	PWY-5078	L-isoleucine degradation II
M5005_Spy_0713	PWY-5101	L-isoleucine biosynthesis II
M5005_Spy_0713	PWY-5103	L-isoleucine biosynthesis III
M5005_Spy_0713	PWY-5104	L-isoleucine biosynthesis IV
M5005_Spy_0713	PWY-5108	L-isoleucine biosynthesis V
M5005_Spy_0722	PWY-2781	<i>cis</i>-zeatin biosynthesis
M5005_Spy_0728	PWY-6605	adenine and adenosine salvage II
M5005_Spy_0728	PWY-6610	adenine and adenosine salvage IV
M5005_Spy_0732	PWY-5663	tetrahydrobiopterin biosynthesis I
M5005_Spy_0732	PWY-5664	tetrahydrobiopterin biosynthesis II
M5005_Spy_0732	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
M5005_Spy_0732	PWY-6703	preQ<sub>0</sub> biosynthesis
M5005_Spy_0732	PWY-6983	tetrahydrobiopterin biosynthesis III
M5005_Spy_0732	PWY-7442	drosopterin and aurodrosopterin biosynthesis
M5005_Spy_0734	PWY-3221	dTDP-L-rhamnose biosynthesis II
M5005_Spy_0734	PWY-6808	dTDP-D-forosamine biosynthesis
M5005_Spy_0734	PWY-6942	dTDP-D-desosamine biosynthesis
M5005_Spy_0734	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
M5005_Spy_0734	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
M5005_Spy_0734	PWY-6974	dTDP-L-olivose biosynthesis
M5005_Spy_0734	PWY-6976	dTDP-L-mycarose biosynthesis
M5005_Spy_0734	PWY-7104	dTDP-L-megosamine biosynthesis
M5005_Spy_0734	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
M5005_Spy_0734	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
M5005_Spy_0734	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
M5005_Spy_0734	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
M5005_Spy_0734	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
M5005_Spy_0734	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
M5005_Spy_0734	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
M5005_Spy_0734	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
M5005_Spy_0736	PWY-3221	dTDP-L-rhamnose biosynthesis II
M5005_Spy_0736	PWY-6808	dTDP-D-forosamine biosynthesis
M5005_Spy_0736	PWY-6942	dTDP-D-desosamine biosynthesis
M5005_Spy_0736	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
M5005_Spy_0736	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
M5005_Spy_0736	PWY-6974	dTDP-L-olivose biosynthesis
M5005_Spy_0736	PWY-6976	dTDP-L-mycarose biosynthesis
M5005_Spy_0736	PWY-7104	dTDP-L-megosamine biosynthesis
M5005_Spy_0736	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
M5005_Spy_0736	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
M5005_Spy_0736	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
M5005_Spy_0736	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
M5005_Spy_0736	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
M5005_Spy_0736	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
M5005_Spy_0736	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
M5005_Spy_0736	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
M5005_Spy_0737	PWY-6502	oxidized GTP and dGTP detoxification
M5005_Spy_0755	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
M5005_Spy_0755	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
M5005_Spy_0758	PWY-6984	lipoate salvage II
M5005_Spy_0758	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
M5005_Spy_0758	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
M5005_Spy_0763	PWY-6749	CMP-legionaminate biosynthesis I
M5005_Spy_0774	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
M5005_Spy_0774	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
M5005_Spy_0774	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
M5005_Spy_0774	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
M5005_Spy_0774	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
M5005_Spy_0774	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
M5005_Spy_0774	PWY-7205	CMP phosphorylation
M5005_Spy_0774	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
M5005_Spy_0774	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
M5005_Spy_0774	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
M5005_Spy_0774	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
M5005_Spy_0774	PWY-7224	purine deoxyribonucleosides salvage
M5005_Spy_0774	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
M5005_Spy_0774	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
M5005_Spy_0775	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
M5005_Spy_0775	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
M5005_Spy_0775	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
M5005_Spy_0775	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
M5005_Spy_0775	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
M5005_Spy_0775	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
M5005_Spy_0775	PWY-7205	CMP phosphorylation
M5005_Spy_0775	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
M5005_Spy_0775	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
M5005_Spy_0775	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
M5005_Spy_0775	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
M5005_Spy_0775	PWY-7224	purine deoxyribonucleosides salvage
M5005_Spy_0775	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
M5005_Spy_0775	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
M5005_Spy_0781	PWY-7310	D-glucosaminate degradation
M5005_Spy_0817	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
M5005_Spy_0817	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
M5005_Spy_0820	PWY-2161	folate polyglutamylation
M5005_Spy_0821	PWY-5663	tetrahydrobiopterin biosynthesis I
M5005_Spy_0821	PWY-5664	tetrahydrobiopterin biosynthesis II
M5005_Spy_0821	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
M5005_Spy_0821	PWY-6703	preQ<sub>0</sub> biosynthesis
M5005_Spy_0821	PWY-6983	tetrahydrobiopterin biosynthesis III
M5005_Spy_0821	PWY-7442	drosopterin and aurodrosopterin biosynthesis
M5005_Spy_0822	PWY-6614	tetrahydrofolate biosynthesis
M5005_Spy_0823	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
M5005_Spy_0823	PWY-6148	tetrahydromethanopterin biosynthesis
M5005_Spy_0823	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
M5005_Spy_0823	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
M5005_Spy_0824	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
M5005_Spy_0824	PWY-6148	tetrahydromethanopterin biosynthesis
M5005_Spy_0824	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
M5005_Spy_0824	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
M5005_Spy_0825	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
M5005_Spy_0825	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
M5005_Spy_0836	PWY-6348	phosphate acquisition
M5005_Spy_0836	PWY-6357	phosphate utilization in cell wall regeneration
M5005_Spy_0836	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
M5005_Spy_0836	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
M5005_Spy_0844	PWY-6823	molybdenum cofactor biosynthesis
M5005_Spy_0844	PWY-6891	thiazole biosynthesis II (Bacillus)
M5005_Spy_0844	PWY-6892	thiazole biosynthesis I (E. coli)
M5005_Spy_0844	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
M5005_Spy_0848	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
M5005_Spy_0848	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
M5005_Spy_0848	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
M5005_Spy_0850	PWY-1281	sulfoacetaldehyde degradation I
M5005_Spy_0850	PWY-5482	pyruvate fermentation to acetate II
M5005_Spy_0850	PWY-5485	pyruvate fermentation to acetate IV
M5005_Spy_0850	PWY-5497	purine nucleobases degradation II (anaerobic)
M5005_Spy_0850	PWY-6637	sulfolactate degradation II
M5005_Spy_0851	PWY-1281	sulfoacetaldehyde degradation I
M5005_Spy_0851	PWY-5482	pyruvate fermentation to acetate II
M5005_Spy_0851	PWY-5485	pyruvate fermentation to acetate IV
M5005_Spy_0851	PWY-5497	purine nucleobases degradation II (anaerobic)
M5005_Spy_0851	PWY-6637	sulfolactate degradation II
M5005_Spy_0862	PWY-7199	pyrimidine deoxyribonucleosides salvage
M5005_Spy_0867	PWY-1622	formaldehyde assimilation I (serine pathway)
M5005_Spy_0867	PWY-181	photorespiration
M5005_Spy_0867	PWY-2161	folate polyglutamylation
M5005_Spy_0867	PWY-2201	folate transformations I
M5005_Spy_0867	PWY-3661	glycine betaine degradation I
M5005_Spy_0867	PWY-3661-1	glycine betaine degradation II (mammalian)
M5005_Spy_0867	PWY-3841	folate transformations II
M5005_Spy_0867	PWY-5497	purine nucleobases degradation II (anaerobic)
M5005_Spy_0873	PWY-5481	pyruvate fermentation to lactate
M5005_Spy_0873	PWY-6901	superpathway of glucose and xylose degradation
M5005_Spy_0876	PWY-5386	methylglyoxal degradation I
M5005_Spy_0879	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
M5005_Spy_0879	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
M5005_Spy_0879	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
M5005_Spy_0889	PWY-7310	D-glucosaminate degradation
M5005_Spy_0897	PWY-6339	syringate degradation
M5005_Spy_0898	PWY-5796	malonate decarboxylase activation
M5005_Spy_0903	PWY-6339	syringate degradation
M5005_Spy_0904	PWY-6339	syringate degradation
M5005_Spy_0906	PWY-5392	reductive TCA cycle II
M5005_Spy_0906	PWY-6038	citrate degradation
M5005_Spy_0907	PWY-6038	citrate degradation
M5005_Spy_0919	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
M5005_Spy_0923	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
M5005_Spy_0923	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
M5005_Spy_0927	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
M5005_Spy_0927	PWY-2161	folate polyglutamylation
M5005_Spy_0927	PWY-2201	folate transformations I
M5005_Spy_0927	PWY-3841	folate transformations II
M5005_Spy_0928	PWY-6984	lipoate salvage II
M5005_Spy_0928	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
M5005_Spy_0928	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
M5005_Spy_0934	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
M5005_Spy_0934	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
M5005_Spy_0938	PWY-6749	CMP-legionaminate biosynthesis I
M5005_Spy_0943	PWY-6556	pyrimidine ribonucleosides salvage II
M5005_Spy_0943	PWY-7181	pyrimidine deoxyribonucleosides degradation
M5005_Spy_0943	PWY-7193	pyrimidine ribonucleosides salvage I
M5005_Spy_0943	PWY-7199	pyrimidine deoxyribonucleosides salvage
M5005_Spy_0945	PWY-3961	phosphopantothenate biosynthesis II
M5005_Spy_0960	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
M5005_Spy_0960	PWY-6167	flavin biosynthesis II (archaea)
M5005_Spy_0960	PWY-6168	flavin biosynthesis III (fungi)
M5005_Spy_0986	PWY-6749	CMP-legionaminate biosynthesis I
M5005_Spy_0988	PWY-1042	glycolysis IV (plant cytosol)
M5005_Spy_0988	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
M5005_Spy_0988	PWY-5484	glycolysis II (from fructose 6-phosphate)
M5005_Spy_0988	PWY-5723	Rubisco shunt
M5005_Spy_0988	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
M5005_Spy_0988	PWY-6886	1-butanol autotrophic biosynthesis
M5005_Spy_0988	PWY-6901	superpathway of glucose and xylose degradation
M5005_Spy_0988	PWY-7003	glycerol degradation to butanol
M5005_Spy_0988	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
M5005_Spy_0988	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
M5005_Spy_0989	PWY-1042	glycolysis IV (plant cytosol)
M5005_Spy_0989	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
M5005_Spy_0989	PWY-5484	glycolysis II (from fructose 6-phosphate)
M5005_Spy_0989	PWY-7385	1,3-propanediol biosynthesis (engineered)
M5005_Spy_1055	PWY-5941	glycogen degradation II (eukaryotic)
M5005_Spy_1055	PWY-622	starch biosynthesis
M5005_Spy_1055	PWY-6731	starch degradation III
M5005_Spy_1055	PWY-6737	starch degradation V
M5005_Spy_1055	PWY-7238	sucrose biosynthesis II
M5005_Spy_1056	PWY-5941	glycogen degradation II (eukaryotic)
M5005_Spy_1056	PWY-6724	starch degradation II
M5005_Spy_1056	PWY-6737	starch degradation V
M5005_Spy_1056	PWY-7238	sucrose biosynthesis II
M5005_Spy_1065	PWY-842	starch degradation I
M5005_Spy_1079	PWY-7310	D-glucosaminate degradation
M5005_Spy_1082	PWY-7310	D-glucosaminate degradation
M5005_Spy_1083	PWY-7310	D-glucosaminate degradation
M5005_Spy_1100	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
M5005_Spy_1101	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
M5005_Spy_1104	PWY-1281	sulfoacetaldehyde degradation I
M5005_Spy_1104	PWY-5482	pyruvate fermentation to acetate II
M5005_Spy_1104	PWY-5485	pyruvate fermentation to acetate IV
M5005_Spy_1104	PWY-5497	purine nucleobases degradation II (anaerobic)
M5005_Spy_1104	PWY-6637	sulfolactate degradation II
M5005_Spy_1107	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
M5005_Spy_1107	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
M5005_Spy_1108	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
M5005_Spy_1108	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
M5005_Spy_1110	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
M5005_Spy_1110	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
M5005_Spy_1116	PWY-7193	pyrimidine ribonucleosides salvage I
M5005_Spy_1123	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
M5005_Spy_1123	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
M5005_Spy_1123	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
M5005_Spy_1123	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
M5005_Spy_1123	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
M5005_Spy_1123	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
M5005_Spy_1123	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
M5005_Spy_1123	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
M5005_Spy_1124	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
M5005_Spy_1124	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
M5005_Spy_1124	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
M5005_Spy_1124	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
M5005_Spy_1124	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
M5005_Spy_1124	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
M5005_Spy_1124	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
M5005_Spy_1124	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
M5005_Spy_1139	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
M5005_Spy_1139	PWY-6855	chitin degradation I (archaea)
M5005_Spy_1139	PWY-6906	chitin derivatives degradation
M5005_Spy_1140	PWY-6700	queuosine biosynthesis
M5005_Spy_1145	PWY-6854	ethylene biosynthesis III (microbes)
M5005_Spy_1157	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
M5005_Spy_1157	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
M5005_Spy_1158	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
M5005_Spy_1158	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
M5005_Spy_1164	PWY-1622	formaldehyde assimilation I (serine pathway)
M5005_Spy_1164	PWY-5484	glycolysis II (from fructose 6-phosphate)
M5005_Spy_1234	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
M5005_Spy_1234	PWY-2201	folate transformations I
M5005_Spy_1234	PWY-3841	folate transformations II
M5005_Spy_1234	PWY-5030	L-histidine degradation III
M5005_Spy_1234	PWY-5497	purine nucleobases degradation II (anaerobic)
M5005_Spy_1234	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
M5005_Spy_1235	PWY-6749	CMP-legionaminate biosynthesis I
M5005_Spy_1248	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
M5005_Spy_1252	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
M5005_Spy_1252	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
M5005_Spy_1252	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
M5005_Spy_1252	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
M5005_Spy_1253	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
M5005_Spy_1253	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
M5005_Spy_1257	PWY-2723	trehalose degradation V
M5005_Spy_1257	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
M5005_Spy_1257	PWY-5661	GDP-glucose biosynthesis
M5005_Spy_1257	PWY-7238	sucrose biosynthesis II
M5005_Spy_1257	PWY-7385	1,3-propanediol biosynthesis (engineered)
M5005_Spy_1273	PWY-4981	L-proline biosynthesis II (from arginine)
M5005_Spy_1273	PWY-4984	urea cycle
M5005_Spy_1273	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
M5005_Spy_1275	PWY-4981	L-proline biosynthesis II (from arginine)
M5005_Spy_1297	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
M5005_Spy_1297	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
M5005_Spy_1297	PWY-6164	3-dehydroquinate biosynthesis I
M5005_Spy_1298	PWY-6164	3-dehydroquinate biosynthesis I
M5005_Spy_1303	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
M5005_Spy_1304	PWY-6807	xyloglucan degradation II (exoglucanase)
M5005_Spy_1314	PWY-7437	protein <i>O</i>-[<i>N</i>-acetyl]-glucosylation
M5005_Spy_1329	PWY-6936	seleno-amino acid biosynthesis
M5005_Spy_1341	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
M5005_Spy_1349	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
M5005_Spy_1349	PWY-6153	autoinducer AI-2 biosynthesis I
M5005_Spy_1349	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
M5005_Spy_1358	PWY-5381	pyridine nucleotide cycling (plants)
M5005_Spy_1365	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
M5005_Spy_1365	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
M5005_Spy_1365	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
M5005_Spy_1375	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
M5005_Spy_1375	PWY-5723	Rubisco shunt
M5005_Spy_1375	PWY-6891	thiazole biosynthesis II (Bacillus)
M5005_Spy_1375	PWY-6892	thiazole biosynthesis I (E. coli)
M5005_Spy_1375	PWY-6901	superpathway of glucose and xylose degradation
M5005_Spy_1375	PWY-7560	methylerythritol phosphate pathway II
M5005_Spy_1376	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
M5005_Spy_1376	PWY-5723	Rubisco shunt
M5005_Spy_1380	PWY-4261	glycerol degradation I
M5005_Spy_1380	PWY-6118	glycerol-3-phosphate shuttle
M5005_Spy_1380	PWY-6952	glycerophosphodiester degradation
M5005_Spy_1381	PWY-4261	glycerol degradation I
M5005_Spy_1388	PWY-6906	chitin derivatives degradation
M5005_Spy_1388	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
M5005_Spy_1388	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
M5005_Spy_1395	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
M5005_Spy_1395	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
M5005_Spy_1400	PWY-7310	D-glucosaminate degradation
M5005_Spy_1479	PWY-7310	D-glucosaminate degradation
M5005_Spy_1483	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
M5005_Spy_1484	PWY-4381	fatty acid biosynthesis initiation I
M5005_Spy_1484	PWY-5743	3-hydroxypropanoate cycle
M5005_Spy_1484	PWY-5744	glyoxylate assimilation
M5005_Spy_1484	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
M5005_Spy_1484	PWY-6679	jadomycin biosynthesis
M5005_Spy_1484	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
M5005_Spy_1485	PWY-4381	fatty acid biosynthesis initiation I
M5005_Spy_1485	PWY-5743	3-hydroxypropanoate cycle
M5005_Spy_1485	PWY-5744	glyoxylate assimilation
M5005_Spy_1485	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
M5005_Spy_1485	PWY-6679	jadomycin biosynthesis
M5005_Spy_1485	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
M5005_Spy_1487	PWY-5971	palmitate biosynthesis II (bacteria and plants)
M5005_Spy_1487	PWY-5973	<i>cis</i>-vaccenate biosynthesis
M5005_Spy_1487	PWY-5989	stearate biosynthesis II (bacteria and plants)
M5005_Spy_1487	PWY-5994	palmitate biosynthesis I (animals and fungi)
M5005_Spy_1487	PWY-6113	superpathway of mycolate biosynthesis
M5005_Spy_1487	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
M5005_Spy_1487	PWY-6519	8-amino-7-oxononanoate biosynthesis I
M5005_Spy_1487	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
M5005_Spy_1487	PWYG-321	mycolate biosynthesis
M5005_Spy_1490	PWY-5367	petroselinate biosynthesis
M5005_Spy_1490	PWY-5971	palmitate biosynthesis II (bacteria and plants)
M5005_Spy_1490	PWY-5973	<i>cis</i>-vaccenate biosynthesis
M5005_Spy_1490	PWY-5989	stearate biosynthesis II (bacteria and plants)
M5005_Spy_1490	PWY-5994	palmitate biosynthesis I (animals and fungi)
M5005_Spy_1490	PWY-6113	superpathway of mycolate biosynthesis
M5005_Spy_1490	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
M5005_Spy_1490	PWY-6519	8-amino-7-oxononanoate biosynthesis I
M5005_Spy_1490	PWY-6951	M5005_Spy_1490|fabG|YP_282853.1|GeneID:3571413
M5005_Spy_1490	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
M5005_Spy_1490	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
M5005_Spy_1490	PWYG-321	mycolate biosynthesis
M5005_Spy_1491	PWY-4381	fatty acid biosynthesis initiation I
M5005_Spy_1491	PWY-6799	fatty acid biosynthesis (plant mitochondria)
M5005_Spy_1491	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
M5005_Spy_1492	PWY-723	alkylnitronates degradation
M5005_Spy_1494	PWY-4381	fatty acid biosynthesis initiation I
M5005_Spy_1507	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
M5005_Spy_1509	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
M5005_Spy_1509	PWY-6549	L-glutamine biosynthesis III
M5005_Spy_1509	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
M5005_Spy_1509	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
M5005_Spy_1532	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
M5005_Spy_1533	PWY-6012	acyl carrier protein metabolism I
M5005_Spy_1533	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
M5005_Spy_1538	PWY-3861	mannitol degradation II
M5005_Spy_1538	PWY-3881	mannitol biosynthesis
M5005_Spy_1538	PWY-5659	GDP-mannose biosynthesis
M5005_Spy_1538	PWY-7456	mannan degradation
M5005_Spy_1538	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
M5005_Spy_1540	PWY-6902	chitin degradation II
M5005_Spy_1542	PWY-7310	D-glucosaminate degradation
M5005_Spy_1543	PWY-621	sucrose degradation III (sucrose invertase)
M5005_Spy_1548	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
M5005_Spy_1569	PWY-5480	pyruvate fermentation to ethanol I
M5005_Spy_1569	PWY-5485	pyruvate fermentation to acetate IV
M5005_Spy_1569	PWY-5493	reductive monocarboxylic acid cycle
M5005_Spy_1585	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
M5005_Spy_1587	PWY-4202	arsenate detoxification I (glutaredoxin)
M5005_Spy_1587	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
M5005_Spy_1587	PWY-6608	guanosine nucleotides degradation III
M5005_Spy_1587	PWY-6609	adenine and adenosine salvage III
M5005_Spy_1587	PWY-6611	adenine and adenosine salvage V
M5005_Spy_1587	PWY-6620	guanine and guanosine salvage
M5005_Spy_1587	PWY-6627	salinosporamide A biosynthesis
M5005_Spy_1587	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
M5005_Spy_1587	PWY-7179	purine deoxyribonucleosides degradation I
M5005_Spy_1587	PWY-7179-1	purine deoxyribonucleosides degradation
M5005_Spy_1596	PWY-381	nitrate reduction II (assimilatory)
M5005_Spy_1596	PWY-5675	nitrate reduction V (assimilatory)
M5005_Spy_1596	PWY-6549	L-glutamine biosynthesis III
M5005_Spy_1596	PWY-6963	ammonia assimilation cycle I
M5005_Spy_1596	PWY-6964	ammonia assimilation cycle II
M5005_Spy_1599	PWY-1042	glycolysis IV (plant cytosol)
M5005_Spy_1599	PWY-5484	glycolysis II (from fructose 6-phosphate)
M5005_Spy_1599	PWY-6886	1-butanol autotrophic biosynthesis
M5005_Spy_1599	PWY-6901	superpathway of glucose and xylose degradation
M5005_Spy_1599	PWY-7003	glycerol degradation to butanol
M5005_Spy_1607	PWY-1042	glycolysis IV (plant cytosol)
M5005_Spy_1607	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
M5005_Spy_1607	PWY-5484	glycolysis II (from fructose 6-phosphate)
M5005_Spy_1607	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
M5005_Spy_1607	PWY-7385	1,3-propanediol biosynthesis (engineered)
M5005_Spy_1609	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
M5005_Spy_1609	PWY-7177	UTP and CTP dephosphorylation II
M5005_Spy_1609	PWY-7185	UTP and CTP dephosphorylation I
M5005_Spy_1610	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
M5005_Spy_1610	PWY-7177	UTP and CTP dephosphorylation II
M5005_Spy_1610	PWY-7185	UTP and CTP dephosphorylation I
M5005_Spy_1633	PWY-7310	D-glucosaminate degradation
M5005_Spy_1635	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
M5005_Spy_1635	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
M5005_Spy_1636	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
M5005_Spy_1636	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
M5005_Spy_1658	PWY-6936	seleno-amino acid biosynthesis
M5005_Spy_1658	PWY-7274	D-cycloserine biosynthesis
M5005_Spy_1661	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
M5005_Spy_1661	PWY-5723	Rubisco shunt
M5005_Spy_1663	PWY-7310	D-glucosaminate degradation
M5005_Spy_1664	PWY-7310	D-glucosaminate degradation
M5005_Spy_1692	PWY-7310	D-glucosaminate degradation
M5005_Spy_1693	PWY-7310	D-glucosaminate degradation
M5005_Spy_1697	PWY-5958	acridone alkaloid biosynthesis
M5005_Spy_1697	PWY-6543	4-aminobenzoate biosynthesis
M5005_Spy_1697	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
M5005_Spy_1697	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
M5005_Spy_1697	PWY-6722	candicidin biosynthesis
M5005_Spy_1698	PWY-5958	acridone alkaloid biosynthesis
M5005_Spy_1698	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
M5005_Spy_1698	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
M5005_Spy_1741	PWY-6349	CDP-archaeol biosynthesis
M5005_Spy_1742	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
M5005_Spy_1742	PWY-5723	Rubisco shunt
M5005_Spy_1743	PWY-5480	pyruvate fermentation to ethanol I
M5005_Spy_1743	PWY-5485	pyruvate fermentation to acetate IV
M5005_Spy_1743	PWY-5493	reductive monocarboxylic acid cycle
M5005_Spy_1744	PWY-7310	D-glucosaminate degradation
M5005_Spy_1745	PWY-7310	D-glucosaminate degradation
M5005_Spy_1770	PWY-5028	L-histidine degradation II
M5005_Spy_1770	PWY-5030	L-histidine degradation III
M5005_Spy_1771	PWY-5028	L-histidine degradation II
M5005_Spy_1771	PWY-5030	L-histidine degradation III
M5005_Spy_1772	PWY-5030	L-histidine degradation III
M5005_Spy_1773	PWY-5030	L-histidine degradation III
M5005_Spy_1773	PWY-5497	purine nucleobases degradation II (anaerobic)
M5005_Spy_1774	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
M5005_Spy_1774	PWY-2161	folate polyglutamylation
M5005_Spy_1774	PWY-2201	folate transformations I
M5005_Spy_1774	PWY-3841	folate transformations II
M5005_Spy_1777	PWY-5028	L-histidine degradation II
M5005_Spy_1777	PWY-5030	L-histidine degradation III
M5005_Spy_1784	PWY-7310	D-glucosaminate degradation
M5005_Spy_1793	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
M5005_Spy_1793	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
M5005_Spy_1793	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
M5005_Spy_1847	PWY-5269	cardiolipin biosynthesis II
M5005_Spy_1847	PWY-5668	cardiolipin biosynthesis I
M5005_Spy_1852	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
M5005_Spy_1853	PWY-3801	sucrose degradation II (sucrose synthase)
M5005_Spy_1853	PWY-6527	stachyose degradation
M5005_Spy_1853	PWY-6981	chitin biosynthesis
M5005_Spy_1853	PWY-7238	sucrose biosynthesis II
M5005_Spy_1853	PWY-7343	UDP-glucose biosynthesis
M5005_Spy_1857	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
M5005_Spy_1857	PWY-6596	adenosine nucleotides degradation I
M5005_Spy_1857	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
