YYK_00005	SSF48295	TrpR-like
YYK_00005	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_00010	SSF55979	DNA clamp
YYK_00015	SSF111331	NAD kinase/diacylglycerol kinase-like
YYK_00035	SSF53178	Peptidyl-tRNA hydrolase-like
YYK_00040	SSF141259	CarD-like
YYK_00040	SSF143517	TRCF domain-like
YYK_00040	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_00045	SSF55174	Alpha-L RNA-binding motif
YYK_00060	SSF56601	beta-lactamase/transpeptidase-like
YYK_00065	SSF52402	Adenine nucleotide alpha hydrolases-like
YYK_00065	SSF56037	PheT/TilS domain
YYK_00075	SSF140990	FtsH protease domain-like
YYK_00075	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_00100	SSF53271	PRTase-like
YYK_00105	SSF53383	PLP-dependent transferases
YYK_00110	SSF50249	Nucleic acid-binding proteins
YYK_00110	SSF57863	ArfGap/RecO-like zinc finger
YYK_00115	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
YYK_00120	SSF47336	ACP-like
YYK_00125	SSF56104	SAICAR synthase-like
YYK_00135	SSF53271	PRTase-like
YYK_00135	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YYK_00145	SSF53328	Formyltransferase
YYK_00150	SSF52335	Methylglyoxal synthase-like
YYK_00150	SSF53927	Cytidine deaminase-like
YYK_00155	SSF51246	Rudiment single hybrid motif
YYK_00155	SSF52440	PreATP-grasp domain
YYK_00155	SSF56059	Glutathione synthetase ATP-binding domain-like
YYK_00160	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
YYK_00180	SSF48557	L-aspartase-like
YYK_00205	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_00215	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_00215	SSF90123	ABC transporter transmembrane region
YYK_00225	SSF46785	"Winged helix" DNA-binding domain
YYK_00225	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_00230	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YYK_00235	SSF56784	HAD-like
YYK_00240	SSF47413	lambda repressor-like DNA-binding domains
YYK_00250	SSF53098	Ribonuclease H-like
YYK_00275	SSF46929	DNA helicase RuvA subunit, C-terminal domain
YYK_00275	SSF47781	RuvA domain 2-like
YYK_00275	SSF50249	Nucleic acid-binding proteins
YYK_00285	SSF142433	CinA-like
YYK_00285	SSF53218	Molybdenum cofactor biosynthesis proteins
YYK_00290	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_00290	SSF54752	RecA protein, C-terminal domain
YYK_00295	SSF52833	Thioredoxin-like
YYK_00305	SSF53098	Ribonuclease H-like
YYK_00325	SSF54999	Ribosomal protein S10
YYK_00330	SSF50447	Translation proteins
YYK_00335	SSF52166	Ribosomal protein L4
YYK_00340	SSF54189	Ribosomal proteins S24e, L23 and L15e
YYK_00345	SSF50104	Translation proteins SH3-like domain
YYK_00345	SSF50249	Nucleic acid-binding proteins
YYK_00350	SSF54570	Ribosomal protein S19
YYK_00355	SSF54843	Ribosomal protein L22
YYK_00360	SSF54814	Prokaryotic type KH domain (KH-domain type II)
YYK_00360	SSF54821	Ribosomal protein S3 C-terminal domain
YYK_00365	SSF54686	Ribosomal protein L16p/L10e
YYK_00370	SSF46561	Ribosomal protein L29 (L29p)
YYK_00375	SSF50249	Nucleic acid-binding proteins
YYK_00380	SSF50193	Ribosomal protein L14
YYK_00385	SSF50104	Translation proteins SH3-like domain
YYK_00390	SSF55282	RL5-like
YYK_00395	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YYK_00400	SSF56047	Ribosomal protein S8
YYK_00405	SSF56053	Ribosomal protein L6
YYK_00410	SSF53137	Translational machinery components
YYK_00415	SSF54211	Ribosomal protein S5 domain 2-like
YYK_00415	SSF54768	dsRNA-binding domain-like
YYK_00420	SSF55129	Ribosomal protein L30p/L7e
YYK_00425	SSF52080	Ribosomal proteins L15p and L18e
YYK_00430	SSF103491	Preprotein translocase SecY subunit
YYK_00435	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_00440	SSF50249	Nucleic acid-binding proteins
YYK_00445	SSF57840	Ribosomal protein L36
YYK_00450	SSF46946	S13-like H2TH domain
YYK_00455	SSF53137	Translational machinery components
YYK_00460	SSF47789	C-terminal domain of RNA polymerase alpha subunit
YYK_00460	SSF55257	RBP11-like subunits of RNA polymerase
YYK_00460	SSF56553	Insert subdomain of RNA polymerase alpha subunit
YYK_00475	SSF56349	DNA breaking-rejoining enzymes
YYK_00485	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_00490	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YYK_00495	SSF50814	Lipocalins
YYK_00495	SSF53807	"Helical backbone" metal receptor
YYK_00500	SSF46785	"Winged helix" DNA-binding domain
YYK_00505	SSF55008	HMA, heavy metal-associated domain
YYK_00515	SSF52374	Nucleotidylyl transferase
YYK_00515	SSF55174	Alpha-L RNA-binding motif
YYK_00520	SSF53955	Lysozyme-like
YYK_00520	SSF56601	beta-lactamase/transpeptidase-like
YYK_00530	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
YYK_00535	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
YYK_00545	SSF141986	LD-carboxypeptidase A C-terminal domain-like
YYK_00550	SSF52317	Class I glutamine amidotransferase-like
YYK_00555	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_00565	SSF54523	Pili subunits
YYK_00590	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYK_00605	SSF53244	MurD-like peptide ligases, peptide-binding domain
YYK_00605	SSF53623	MurD-like peptide ligases, catalytic domain
YYK_00620	SSF52833	Thioredoxin-like
YYK_00630	SSF50249	Nucleic acid-binding proteins
YYK_00640	SSF50249	Nucleic acid-binding proteins
YYK_00660	SSF50249	Nucleic acid-binding proteins
YYK_00665	SSF47973	Ribosomal protein S7
YYK_00670	SSF50447	Translation proteins
YYK_00670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_00670	SSF54211	Ribosomal protein S5 domain 2-like
YYK_00670	SSF54980	EF-G C-terminal domain-like
YYK_00675	SSF55486	Metalloproteases ("zincins"), catalytic domain
YYK_00680	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_00680	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YYK_00685	SSF53748	Phosphoglycerate kinase
YYK_00700	SSF54368	Glutamine synthetase, N-terminal domain
YYK_00700	SSF55931	Glutamine synthetase/guanido kinase
YYK_00705	SSF56281	Metallo-hydrolase/oxidoreductase
YYK_00715	SSF53067	Actin-like ATPase domain
YYK_00720	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YYK_00725	SSF53067	Actin-like ATPase domain
YYK_00740	SSF161098	MetI-like
YYK_00745	SSF161098	MetI-like
YYK_00750	SSF51445	(Trans)glycosidases
YYK_00795	SSF51445	(Trans)glycosidases
YYK_00805	SSF52794	PTS system IIB component-like
YYK_00805	SSF55804	Phoshotransferase/anion transport protein
YYK_00805	SSF63520	PTS-regulatory domain, PRD
YYK_00810	SSF52794	PTS system IIB component-like
YYK_00820	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YYK_00830	SSF51695	PLC-like phosphodiesterases
YYK_00835	SSF82607	YbaB-like
YYK_00840	SSF53697	SIS domain
YYK_00850	SSF49785	Galactose-binding domain-like
YYK_00850	SSF53474	alpha/beta-Hydrolases
YYK_00850	SSF81761	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain
YYK_00860	SSF56601	beta-lactamase/transpeptidase-like
YYK_00865	SSF51998	PFL-like glycyl radical enzymes
YYK_00870	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
YYK_00870	SSF56672	DNA/RNA polymerases
YYK_00875	SSF46785	"Winged helix" DNA-binding domain
YYK_00880	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_00885	SSF53613	Ribokinase-like
YYK_00890	SSF48150	DNA-glycosylase
YYK_00920	SSF161098	MetI-like
YYK_00930	SSF53850	Periplasmic binding protein-like II
YYK_00935	SSF100950	NagB/RpiA/CoA transferase-like
YYK_00940	SSF55008	HMA, heavy metal-associated domain
YYK_00945	SSF81653	Calcium ATPase, transduction domain A
YYK_00955	SSF52833	Thioredoxin-like
YYK_00955	SSF56784	HAD-like
YYK_00965	SSF51306	LexA/Signal peptidase
YYK_00975	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_00975	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YYK_00980	SSF54106	LysM domain
YYK_00985	SSF51011	Glycosyl hydrolase domain
YYK_00985	SSF51445	(Trans)glycosidases
YYK_00990	SSF51261	Duplicated hybrid motif
YYK_00995	SSF46689	Homeodomain-like
YYK_01000	SSF53098	Ribonuclease H-like
YYK_01005	SSF51261	Duplicated hybrid motif
YYK_01005	SSF55604	Glucose permease domain IIB
YYK_01015	SSF102829	Cell division protein ZapA-like
YYK_01030	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YYK_01045	SSF51316	Mss4-like
YYK_01045	SSF55068	Peptide methionine sulfoxide reductase
YYK_01070	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_01080	SSF50182	Sm-like ribonucleoproteins
YYK_01080	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
YYK_01080	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
YYK_01090	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_01090	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YYK_01120	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_01125	SSF46689	Homeodomain-like
YYK_01135	SSF51126	Pectin lyase-like
YYK_01145	SSF46785	"Winged helix" DNA-binding domain
YYK_01165	SSF81338	Aquaporin-like
YYK_01175	SSF55811	Nudix
YYK_01200	SSF57829	Zn-binding ribosomal proteins
YYK_01205	SSF57829	Zn-binding ribosomal proteins
YYK_01210	SSF52954	Class II aaRS ABD-related
YYK_01210	SSF55681	Class II aaRS and biotin synthetases
YYK_01215	SSF50129	GroES-like
YYK_01215	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_01220	SSF53720	ALDH-like
YYK_01220	SSF56796	Dehydroquinate synthase-like
YYK_01265	SSF54211	Ribosomal protein S5 domain 2-like
YYK_01265	SSF55060	GHMP Kinase, C-terminal domain
YYK_01275	SSF51395	FMN-linked oxidoreductases
YYK_01290	SSF55021	ACT-like
YYK_01295	SSF51998	PFL-like glycyl radical enzymes
YYK_01300	SSF53254	Phosphoglycerate mutase-like
YYK_01310	SSF51064	Head domain of nucleotide exchange factor GrpE
YYK_01310	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
YYK_01315	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
YYK_01315	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
YYK_01315	SSF53067	Actin-like ATPase domain
YYK_01325	SSF55681	Class II aaRS and biotin synthetases
YYK_01330	SSF75304	Amidase signature (AS) enzymes
YYK_01340	SSF161098	MetI-like
YYK_01345	SSF47413	lambda repressor-like DNA-binding domains
YYK_01365	SSF55120	Pseudouridine synthase
YYK_01370	SSF53613	Ribokinase-like
YYK_01380	SSF110710	TTHA0583/YokD-like
YYK_01385	SSF49899	Concanavalin A-like lectins/glucanases
YYK_01400	SSF50129	GroES-like
YYK_01400	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_01405	SSF53474	alpha/beta-Hydrolases
YYK_01410	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_01420	SSF46785	"Winged helix" DNA-binding domain
YYK_01425	SSF46689	Homeodomain-like
YYK_01430	SSF53474	alpha/beta-Hydrolases
YYK_01435	SSF53474	alpha/beta-Hydrolases
YYK_01440	SSF102735	Trigger factor ribosome-binding domain
YYK_01440	SSF109998	Triger factor/SurA peptide-binding domain-like
YYK_01440	SSF54534	FKBP-like
YYK_01445	SSF53448	Nucleotide-diphospho-sugar transferases
YYK_01455	SSF142887	PhtA domain-like
YYK_01465	SSF52317	Class I glutamine amidotransferase-like
YYK_01465	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_01470	SSF51569	Aldolase
YYK_01475	SSF143800	L28p-like
YYK_01490	SSF56784	HAD-like
YYK_01505	SSF53383	PLP-dependent transferases
YYK_01510	SSF46785	"Winged helix" DNA-binding domain
YYK_01510	SSF55781	GAF domain-like
YYK_01515	SSF52499	Isochorismatase-like hydrolases
YYK_01520	SSF50104	Translation proteins SH3-like domain
YYK_01530	SSF141000	Glu-tRNAGln amidotransferase C subunit
YYK_01535	SSF75304	Amidase signature (AS) enzymes
YYK_01540	SSF55931	Glutamine synthetase/guanido kinase
YYK_01540	SSF89095	GatB/YqeY motif
YYK_01555	SSF54211	Ribosomal protein S5 domain 2-like
YYK_01555	SSF55060	GHMP Kinase, C-terminal domain
YYK_01570	SSF110395	CutC-like
YYK_01580	SSF56784	HAD-like
YYK_01585	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_01590	SSF75471	YhbY-like
YYK_01595	SSF52374	Nucleotidylyl transferase
YYK_01600	SSF109604	HD-domain/PDEase-like
YYK_01605	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YYK_01615	SSF52499	Isochorismatase-like hydrolases
YYK_01620	SSF81301	Nucleotidyltransferase
YYK_01625	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYK_01630	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_01635	SSF52374	Nucleotidylyl transferase
YYK_01640	SSF46955	Putative DNA-binding domain
YYK_01640	SSF89082	Antibiotic binding domain of TipA-like multidrug resistance regulators
YYK_01675	SSF51445	(Trans)glycosidases
YYK_01685	SSF46785	"Winged helix" DNA-binding domain
YYK_01685	SSF64288	Chorismate lyase-like
YYK_01690	SSF56219	DNase I-like
YYK_01695	SSF51261	Duplicated hybrid motif
YYK_01695	SSF55604	Glucose permease domain IIB
YYK_01705	SSF46785	"Winged helix" DNA-binding domain
YYK_01710	SSF75625	YebC-like
YYK_01720	SSF101852	Bacterial fluorinating enzyme, C-terminal domain
YYK_01720	SSF102522	Bacterial fluorinating enzyme, N-terminal domain
YYK_01735	SSF52821	Rhodanese/Cell cycle control phosphatase
YYK_01740	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
YYK_01745	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_01755	SSF50249	Nucleic acid-binding proteins
YYK_01760	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYK_01765	SSF53955	Lysozyme-like
YYK_01765	SSF56601	beta-lactamase/transpeptidase-like
YYK_01770	SSF52980	Restriction endonuclease-like
YYK_01775	SSF102405	MCP/YpsA-like
YYK_01790	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYK_01800	SSF63411	LuxS/MPP-like metallohydrolase
YYK_01805	SSF109604	HD-domain/PDEase-like
YYK_01805	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
YYK_01815	SSF63562	RPB6/omega subunit-like
YYK_01825	SSF50486	FMT C-terminal domain-like
YYK_01825	SSF53328	Formyltransferase
YYK_01830	SSF48013	NusB-like
YYK_01830	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYK_01840	SSF56112	Protein kinase-like (PK-like)
YYK_01850	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YYK_01855	SSF46894	C-terminal effector domain of the bipartite response regulators
YYK_01855	SSF52172	CheY-like
YYK_01860	SSF50891	Cyclophilin-like
YYK_01860	SSF56784	HAD-like
YYK_01865	SSF50249	Nucleic acid-binding proteins
YYK_01870	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YYK_01875	SSF54211	Ribosomal protein S5 domain 2-like
YYK_01875	SSF54980	EF-G C-terminal domain-like
YYK_01880	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_01885	SSF53271	PRTase-like
YYK_01890	SSF69754	Ribosome binding protein Y (YfiA homologue)
YYK_01900	SSF50249	Nucleic acid-binding proteins
YYK_01900	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYK_01910	SSF159234	FomD-like
YYK_01925	SSF46785	"Winged helix" DNA-binding domain
YYK_01925	SSF64288	Chorismate lyase-like
YYK_01930	SSF49785	Galactose-binding domain-like
YYK_01930	SSF51445	(Trans)glycosidases
YYK_01935	SSF52728	PTS IIb component
YYK_01950	SSF53062	PTS system fructose IIA component-like
YYK_01955	SSF74650	Galactose mutarotase-like
YYK_01960	SSF140121	SPy1572-like
YYK_01970	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
YYK_01975	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_01980	SSF46589	tRNA-binding arm
YYK_01980	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YYK_01980	SSF50677	ValRS/IleRS/LeuRS editing domain
YYK_01980	SSF52374	Nucleotidylyl transferase
YYK_01990	SSF140931	Fic-like
YYK_01995	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_02005	SSF47413	lambda repressor-like DNA-binding domains
YYK_02010	SSF142906	YjbR-like
YYK_02010	SSF88697	PUA domain-like
YYK_02015	SSF55681	Class II aaRS and biotin synthetases
YYK_02020	SSF50447	Translation proteins
YYK_02020	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_02020	SSF54980	EF-G C-terminal domain-like
YYK_02060	SSF51984	MurCD N-terminal domain
YYK_02060	SSF53244	MurD-like peptide ligases, peptide-binding domain
YYK_02060	SSF53623	MurD-like peptide ligases, catalytic domain
YYK_02065	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YYK_02080	SSF52490	Tubulin nucleotide-binding domain-like
YYK_02080	SSF55307	Tubulin C-terminal domain-like
YYK_02085	SSF51419	PLP-binding barrel
YYK_02100	SSF55174	Alpha-L RNA-binding motif
YYK_02115	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YYK_02115	SSF50677	ValRS/IleRS/LeuRS editing domain
YYK_02115	SSF52374	Nucleotidylyl transferase
YYK_02125	SSF143567	YkuJ-like
YYK_02130	SSF161098	MetI-like
YYK_02135	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_02140	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_02140	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YYK_02150	SSF51306	LexA/Signal peptidase
YYK_02165	SSF63817	Sortase
YYK_02170	SSF46955	Putative DNA-binding domain
YYK_02220	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_02230	SSF51679	Bacterial luciferase-like
YYK_02235	SSF50249	Nucleic acid-binding proteins
YYK_02235	SSF55681	Class II aaRS and biotin synthetases
YYK_02240	SSF53254	Phosphoglycerate mutase-like
YYK_02245	SSF55826	YbaK/ProRS associated domain
YYK_02260	SSF51445	(Trans)glycosidases
YYK_02280	SSF51621	Phosphoenolpyruvate/pyruvate domain
YYK_02285	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YYK_02285	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YYK_02295	SSF50447	Translation proteins
YYK_02295	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
YYK_02295	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_02300	SSF51351	Triosephosphate isomerase (TIM)
YYK_02305	SSF56784	HAD-like
YYK_02310	SSF109604	HD-domain/PDEase-like
YYK_02320	SSF50814	Lipocalins
YYK_02325	SSF53098	Ribonuclease H-like
YYK_02330	SSF51556	Metallo-dependent hydrolases
YYK_02340	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_02355	SSF53784	Phosphofructokinase
YYK_02360	SSF50800	PK beta-barrel domain-like
YYK_02360	SSF51621	Phosphoenolpyruvate/pyruvate domain
YYK_02360	SSF52935	PK C-terminal domain-like
YYK_02365	SSF54001	Cysteine proteinases
YYK_02375	SSF52266	SGNH hydrolase
YYK_02380	SSF51306	LexA/Signal peptidase
YYK_02390	SSF161098	MetI-like
YYK_02395	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_02405	SSF56281	Metallo-hydrolase/oxidoreductase
YYK_02415	SSF53633	Carbamate kinase-like
YYK_02415	SSF88697	PUA domain-like
YYK_02420	SSF53720	ALDH-like
YYK_02425	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YYK_02425	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_02430	SSF46689	Homeodomain-like
YYK_02435	SSF82549	DAK1/DegV-like
YYK_02440	SSF46785	"Winged helix" DNA-binding domain
YYK_02440	SSF53383	PLP-dependent transferases
YYK_02460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_02465	SSF51556	Metallo-dependent hydrolases
YYK_02475	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YYK_02480	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YYK_02485	SSF53448	Nucleotide-diphospho-sugar transferases
YYK_02495	SSF53448	Nucleotide-diphospho-sugar transferases
YYK_02500	SSF53448	Nucleotide-diphospho-sugar transferases
YYK_02535	SSF51269	AFP III-like domain
YYK_02535	SSF51569	Aldolase
YYK_02540	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YYK_02545	SSF51161	Trimeric LpxA-like enzymes
YYK_02565	SSF46689	Homeodomain-like
YYK_02570	SSF53098	Ribonuclease H-like
YYK_02600	SSF53098	Ribonuclease H-like
YYK_02610	SSF56349	DNA breaking-rejoining enzymes
YYK_02635	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_02640	SSF53850	Periplasmic binding protein-like II
YYK_02640	SSF55021	ACT-like
YYK_02650	SSF50249	Nucleic acid-binding proteins
YYK_02650	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYK_02660	SSF51971	Nucleotide-binding domain
YYK_02660	SSF54373	FAD-linked reductases, C-terminal domain
YYK_02670	SSF46785	"Winged helix" DNA-binding domain
YYK_02675	SSF46689	Homeodomain-like
YYK_02680	SSF53098	Ribonuclease H-like
YYK_02685	SSF54403	Cystatin/monellin
YYK_02690	SSF53383	PLP-dependent transferases
YYK_02695	SSF50249	Nucleic acid-binding proteins
YYK_02695	SSF55681	Class II aaRS and biotin synthetases
YYK_02705	SSF143011	RelE-like
YYK_02715	SSF55298	YjgF-like
YYK_02720	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_02725	SSF142338	CofD-like
YYK_02730	SSF55608	Homing endonucleases
YYK_02745	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YYK_02750	SSF53671	Aspartate/ornithine carbamoyltransferase
YYK_02770	SSF49785	Galactose-binding domain-like
YYK_02770	SSF49899	Concanavalin A-like lectins/glucanases
YYK_02770	SSF51445	(Trans)glycosidases
YYK_02775	SSF46785	"Winged helix" DNA-binding domain
YYK_02775	SSF55252	C-terminal domain of arginine repressor
YYK_02790	SSF100950	NagB/RpiA/CoA transferase-like
YYK_02830	SSF47336	ACP-like
YYK_02855	SSF47616	GST C-terminal domain-like
YYK_02855	SSF52833	Thioredoxin-like
YYK_02860	SSF55120	Pseudouridine synthase
YYK_02860	SSF55174	Alpha-L RNA-binding motif
YYK_02870	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YYK_02885	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_02890	SSF53244	MurD-like peptide ligases, peptide-binding domain
YYK_02890	SSF53623	MurD-like peptide ligases, catalytic domain
YYK_02890	SSF63418	MurE/MurF N-terminal domain
YYK_02900	SSF47781	RuvA domain 2-like
YYK_02915	SSF54631	CBS-domain pair
YYK_02915	SSF55021	ACT-like
YYK_02950	SSF53790	Tetrapyrrole methylase
YYK_02955	SSF53383	PLP-dependent transferases
YYK_02960	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YYK_02965	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_02965	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
YYK_02965	SSF55021	ACT-like
YYK_02970	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
YYK_02970	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
YYK_02975	SSF52833	Thioredoxin-like
YYK_02980	SSF161111	Cation efflux protein transmembrane domain-like
YYK_03025	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYK_03030	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYK_03035	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_03045	SSF143422	Transposase IS200-like
YYK_03050	SSF53738	Phosphoglucomutase, first 3 domains
YYK_03050	SSF55957	Phosphoglucomutase, C-terminal domain
YYK_03060	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
YYK_03065	SSF102645	CoaB-like
YYK_03070	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_03080	SSF51905	FAD/NAD(P)-binding domain
YYK_03080	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
YYK_03085	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_03090	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYK_03095	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYK_03100	SSF116734	DNA methylase specificity domain
YYK_03120	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YYK_03125	SSF48371	ARM repeat
YYK_03130	SSF48371	ARM repeat
YYK_03135	SSF141694	AF2212/PG0164-like
YYK_03140	SSF102114	Radical SAM enzymes
YYK_03145	SSF100950	NagB/RpiA/CoA transferase-like
YYK_03145	SSF46785	"Winged helix" DNA-binding domain
YYK_03150	SSF100950	NagB/RpiA/CoA transferase-like
YYK_03150	SSF46785	"Winged helix" DNA-binding domain
YYK_03155	SSF46973	Enzyme IIa from lactose specific PTS, IIa-lac
YYK_03160	SSF52794	PTS system IIB component-like
YYK_03170	SSF51998	PFL-like glycyl radical enzymes
YYK_03175	SSF51569	Aldolase
YYK_03180	SSF56796	Dehydroquinate synthase-like
YYK_03185	SSF56796	Dehydroquinate synthase-like
YYK_03190	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_03190	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YYK_03195	SSF51569	Aldolase
YYK_03205	SSF51905	FAD/NAD(P)-binding domain
YYK_03205	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
YYK_03215	SSF53067	Actin-like ATPase domain
YYK_03230	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
YYK_03240	SSF53474	alpha/beta-Hydrolases
YYK_03245	SSF55486	Metalloproteases ("zincins"), catalytic domain
YYK_03260	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_03265	SSF56784	HAD-like
YYK_03270	SSF53613	Ribokinase-like
YYK_03275	SSF53613	Ribokinase-like
YYK_03280	SSF51391	Thiamin phosphate synthase
YYK_03290	SSF53167	Purine and uridine phosphorylases
YYK_03305	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_03310	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_03335	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
YYK_03345	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_03360	SSF102741	Obg GTP-binding protein C-terminal domain
YYK_03360	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_03360	SSF82051	Obg GTP-binding protein N-terminal domain
YYK_03375	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_03375	SSF52980	Restriction endonuclease-like
YYK_03390	SSF54211	Ribosomal protein S5 domain 2-like
YYK_03390	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YYK_03390	SSF56719	Type II DNA topoisomerase
YYK_03400	SSF140931	Fic-like
YYK_03405	SSF140931	Fic-like
YYK_03420	SSF101904	GyrA/ParC C-terminal domain-like
YYK_03420	SSF56719	Type II DNA topoisomerase
YYK_03445	SSF53383	PLP-dependent transferases
YYK_03460	SSF53383	PLP-dependent transferases
YYK_03465	SSF143437	THUMP domain-like
YYK_03465	SSF52402	Adenine nucleotide alpha hydrolases-like
YYK_03480	SSF110324	Ribosomal L27 protein-like
YYK_03490	SSF46785	"Winged helix" DNA-binding domain
YYK_03490	SSF53850	Periplasmic binding protein-like II
YYK_03500	SSF55120	Pseudouridine synthase
YYK_03500	SSF55174	Alpha-L RNA-binding motif
YYK_03515	SSF53271	PRTase-like
YYK_03520	SSF53671	Aspartate/ornithine carbamoyltransferase
YYK_03525	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
YYK_03525	SSF52317	Class I glutamine amidotransferase-like
YYK_03540	SSF53182	Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
YYK_03565	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_03565	SSF90123	ABC transporter transmembrane region
YYK_03570	SSF88713	Glycoside hydrolase/deacetylase
YYK_03575	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_03575	SSF55021	ACT-like
YYK_03575	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YYK_03580	SSF54211	Ribosomal protein S5 domain 2-like
YYK_03580	SSF55060	GHMP Kinase, C-terminal domain
YYK_03585	SSF56176	FAD-binding/transporter-associated domain-like
YYK_03585	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
YYK_03590	SSF50331	MOP-like
YYK_03590	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_03600	SSF161098	MetI-like
YYK_03605	SSF53850	Periplasmic binding protein-like II
YYK_03610	SSF116726	TrkA C-terminal domain-like
YYK_03610	SSF81340	Clc chloride channel
YYK_03620	SSF46997	Bacterial immunoglobulin/albumin-binding domains
YYK_03620	SSF52025	PA domain
YYK_03620	SSF52743	Subtilisin-like
YYK_03635	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
YYK_03650	SSF50346	PRC-barrel domain
YYK_03650	SSF50447	Translation proteins
YYK_03655	SSF75217	alpha/beta knot
YYK_03660	SSF53383	PLP-dependent transferases
YYK_03670	SSF53613	Ribokinase-like
YYK_03675	SSF52794	PTS system IIB component-like
YYK_03675	SSF55804	Phoshotransferase/anion transport protein
YYK_03680	SSF54611	SecB-like
YYK_03685	SSF82549	DAK1/DegV-like
YYK_03690	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_03690	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YYK_03695	SSF81301	Nucleotidyltransferase
YYK_03695	SSF81891	Poly A polymerase C-terminal region-like
YYK_03725	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
YYK_03730	SSF53597	Dihydrofolate reductase-like
YYK_03735	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_03735	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YYK_03745	SSF54919	Nucleoside diphosphate kinase, NDK
YYK_03755	SSF50447	Translation proteins
YYK_03755	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_03755	SSF54980	EF-G C-terminal domain-like
YYK_03760	SSF55331	Tautomerase/MIF
YYK_03775	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_03775	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YYK_03785	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYK_03795	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YYK_03800	SSF53383	PLP-dependent transferases
YYK_03810	SSF53955	Lysozyme-like
YYK_03835	SSF144015	Peptidoglycan deacetylase N-terminal noncatalytic region
YYK_03850	SSF52317	Class I glutamine amidotransferase-like
YYK_03850	SSF52402	Adenine nucleotide alpha hydrolases-like
YYK_03850	SSF54810	GMP synthetase C-terminal dimerisation domain
YYK_03855	SSF46785	"Winged helix" DNA-binding domain
YYK_03855	SSF64288	Chorismate lyase-like
YYK_03860	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YYK_03865	SSF47446	Signal peptide-binding domain
YYK_03865	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_03880	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_03895	SSF56349	DNA breaking-rejoining enzymes
YYK_03900	SSF53738	Phosphoglucomutase, first 3 domains
YYK_03915	SSF143011	RelE-like
YYK_03930	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_03945	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_03960	SSF56059	Glutathione synthetase ATP-binding domain-like
YYK_03965	SSF53474	alpha/beta-Hydrolases
YYK_03970	SSF53474	alpha/beta-Hydrolases
YYK_03980	SSF46689	Homeodomain-like
YYK_03980	SSF55136	Probable bacterial effector-binding domain
YYK_03985	SSF51905	FAD/NAD(P)-binding domain
YYK_03990	SSF56784	HAD-like
YYK_03995	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
YYK_03995	SSF54736	ClpS-like
YYK_04000	SSF160369	Ribosomal protein L10-like
YYK_04015	SSF51161	Trimeric LpxA-like enzymes
YYK_04050	SSF53098	Ribonuclease H-like
YYK_04055	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_04070	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
YYK_04070	SSF56300	Metallo-dependent phosphatases
YYK_04075	SSF51338	Composite domain of metallo-dependent hydrolases
YYK_04075	SSF51556	Metallo-dependent hydrolases
YYK_04080	SSF52141	Uracil-DNA glycosylase-like
YYK_04095	SSF50324	Inorganic pyrophosphatase
YYK_04100	SSF51366	Ribulose-phoshate binding barrel
YYK_04105	SSF51395	FMN-linked oxidoreductases
YYK_04120	SSF51161	Trimeric LpxA-like enzymes
YYK_04120	SSF53448	Nucleotide-diphospho-sugar transferases
YYK_04125	SSF51161	Trimeric LpxA-like enzymes
YYK_04125	SSF53448	Nucleotide-diphospho-sugar transferases
YYK_04130	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YYK_04140	SSF53850	Periplasmic binding protein-like II
YYK_04145	SSF53850	Periplasmic binding protein-like II
YYK_04150	SSF55811	Nudix
YYK_04155	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YYK_04165	SSF46600	C-terminal UvrC-binding domain of UvrB
YYK_04175	SSF46600	C-terminal UvrC-binding domain of UvrB
YYK_04175	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_04185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_04190	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YYK_04195	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_04200	SSF53383	PLP-dependent transferases
YYK_04215	SSF74650	Galactose mutarotase-like
YYK_04220	SSF51445	(Trans)glycosidases
YYK_04225	SSF52794	PTS system IIB component-like
YYK_04230	SSF46973	Enzyme IIa from lactose specific PTS, IIa-lac
YYK_04235	SSF50151	SacY-like RNA-binding domain
YYK_04235	SSF63520	PTS-regulatory domain, PRD
YYK_04245	SSF53613	Ribokinase-like
YYK_04255	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
YYK_04260	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
YYK_04270	SSF100950	NagB/RpiA/CoA transferase-like
YYK_04270	SSF46785	"Winged helix" DNA-binding domain
YYK_04275	SSF56349	DNA breaking-rejoining enzymes
YYK_04285	SSF56349	DNA breaking-rejoining enzymes
YYK_04290	SSF56349	DNA breaking-rejoining enzymes
YYK_04305	SSF47413	lambda repressor-like DNA-binding domains
YYK_04305	SSF51306	LexA/Signal peptidase
YYK_04310	SSF48150	DNA-glycosylase
YYK_04310	SSF55811	Nudix
YYK_04320	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_04320	SSF90123	ABC transporter transmembrane region
YYK_04335	SSF55120	Pseudouridine synthase
YYK_04340	SSF111331	NAD kinase/diacylglycerol kinase-like
YYK_04345	SSF81301	Nucleotidyltransferase
YYK_04350	SSF55154	CYTH-like phosphatases
YYK_04355	SSF53271	PRTase-like
YYK_04360	SSF53383	PLP-dependent transferases
YYK_04365	SSF160800	Lp2179-like
YYK_04375	SSF46785	"Winged helix" DNA-binding domain
YYK_04375	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_04380	SSF52317	Class I glutamine amidotransferase-like
YYK_04385	SSF47781	RuvA domain 2-like
YYK_04390	SSF63817	Sortase
YYK_04395	SSF101904	GyrA/ParC C-terminal domain-like
YYK_04395	SSF56719	Type II DNA topoisomerase
YYK_04400	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_04400	SSF56327	LDH C-terminal domain-like
YYK_04405	SSF53597	Dihydrofolate reductase-like
YYK_04420	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_04425	SSF53822	Periplasmic binding protein-like I
YYK_04430	SSF53927	Cytidine deaminase-like
YYK_04435	SSF51569	Aldolase
YYK_04440	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
YYK_04440	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
YYK_04440	SSF54680	Pyrimidine nucleoside phosphorylase C-terminal domain
YYK_04445	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYK_04450	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_04455	SSF46992	Ribosomal protein S20
YYK_04460	SSF54001	Cysteine proteinases
YYK_04470	SSF47384	Homodimeric domain of signal transducing histidine kinase
YYK_04470	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YYK_04475	SSF52172	CheY-like
YYK_04490	SSF109755	PhoU-like
YYK_04495	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_04500	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_04505	SSF161098	MetI-like
YYK_04510	SSF161098	MetI-like
YYK_04530	SSF158504	BH2638-like
YYK_04545	SSF52374	Nucleotidylyl transferase
YYK_04545	SSF82114	Riboflavin kinase-like
YYK_04575	SSF140683	SP0561-like
YYK_04580	SSF46689	Homeodomain-like
YYK_04585	SSF53098	Ribonuclease H-like
YYK_04590	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YYK_04605	SSF55961	Bet v1-like
YYK_04610	SSF56784	HAD-like
YYK_04615	SSF53187	Zn-dependent exopeptidases
YYK_04615	SSF55031	Bacterial exopeptidase dimerisation domain
YYK_04630	SSF46785	"Winged helix" DNA-binding domain
YYK_04655	SSF46785	"Winged helix" DNA-binding domain
YYK_04680	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
YYK_04685	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
YYK_04690	SSF51717	Dihydropteroate synthetase-like
YYK_04695	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
YYK_04700	SSF55811	Nudix
YYK_04735	SSF46589	tRNA-binding arm
YYK_04735	SSF55681	Class II aaRS and biotin synthetases
YYK_04740	SSF51445	(Trans)glycosidases
YYK_04750	SSF56784	HAD-like
YYK_04755	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_04760	SSF51658	Xylose isomerase-like
YYK_04775	SSF46785	"Winged helix" DNA-binding domain
YYK_04775	SSF48008	GntR ligand-binding domain-like
YYK_04805	SSF55205	EPT/RTPC-like
YYK_04815	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
YYK_04820	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
YYK_04820	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
YYK_04820	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_04825	SSF52943	ATP synthase (F1-ATPase), gamma subunit
YYK_04830	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
YYK_04830	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
YYK_04830	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_04835	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
YYK_04840	SSF81573	F1F0 ATP synthase subunit B, membrane domain
YYK_04845	SSF81336	F1F0 ATP synthase subunit A
YYK_04850	SSF81333	F1F0 ATP synthase subunit C
YYK_04855	SSF111331	NAD kinase/diacylglycerol kinase-like
YYK_04860	SSF47781	RuvA domain 2-like
YYK_04860	SSF50249	Nucleic acid-binding proteins
YYK_04860	SSF52113	BRCT domain
YYK_04860	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
YYK_04880	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_04880	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YYK_04885	SSF48371	ARM repeat
YYK_04890	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YYK_04900	SSF56784	HAD-like
YYK_04905	SSF56784	HAD-like
YYK_04915	SSF54768	dsRNA-binding domain-like
YYK_04915	SSF69065	RNase III domain-like
YYK_04935	SSF53098	Ribonuclease H-like
YYK_04945	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
YYK_04945	SSF51621	Phosphoenolpyruvate/pyruvate domain
YYK_04945	SSF52009	Phosphohistidine domain
YYK_04950	SSF55594	HPr-like
YYK_04955	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
YYK_04960	SSF48256	Citrate synthase
YYK_04965	SSF52016	LeuD/IlvD-like
YYK_04965	SSF53732	Aconitase iron-sulfur domain
YYK_04970	SSF52833	Thioredoxin-like
YYK_04975	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
YYK_04975	SSF51998	PFL-like glycyl radical enzymes
YYK_04985	SSF47240	Ferritin-like
YYK_04990	SSF47413	lambda repressor-like DNA-binding domains
YYK_04990	SSF53822	Periplasmic binding protein-like I
YYK_04995	SSF48230	Chondroitin AC/alginate lyase
YYK_05000	SSF49863	Hyaluronate lyase-like, C-terminal domain
YYK_05000	SSF74650	Galactose mutarotase-like
YYK_05005	SSF48230	Chondroitin AC/alginate lyase
YYK_05005	SSF49785	Galactose-binding domain-like
YYK_05005	SSF74650	Galactose mutarotase-like
YYK_05025	SSF52728	PTS IIb component
YYK_05035	SSF53062	PTS system fructose IIA component-like
YYK_05050	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
YYK_05055	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_05090	SSF47413	lambda repressor-like DNA-binding domains
YYK_05115	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
YYK_05115	SSF50447	Translation proteins
YYK_05115	SSF55186	ThrRS/AlaRS common domain
YYK_05115	SSF55681	Class II aaRS and biotin synthetases
YYK_05125	SSF109998	Triger factor/SurA peptide-binding domain-like
YYK_05145	SSF55486	Metalloproteases ("zincins"), catalytic domain
YYK_05165	SSF51569	Aldolase
YYK_05170	SSF51569	Aldolase
YYK_05175	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_05175	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YYK_05180	SSF56796	Dehydroquinate synthase-like
YYK_05185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_05195	SSF53822	Periplasmic binding protein-like I
YYK_05200	SSF53822	Periplasmic binding protein-like I
YYK_05215	SSF158622	YheA/YmcA-like
YYK_05220	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YYK_05220	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_05225	SSF103263	Chorismate synthase, AroC
YYK_05230	SSF51569	Aldolase
YYK_05235	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYK_05235	SSF88697	PUA domain-like
YYK_05250	SSF74731	Ribosomal protein L20
YYK_05255	SSF143034	L35p-like
YYK_05260	SSF54364	Translation initiation factor IF3, N-terminal domain
YYK_05260	SSF55200	Translation initiation factor IF3, C-terminal domain
YYK_05265	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_05285	SSF53448	Nucleotide-diphospho-sugar transferases
YYK_05295	SSF53448	Nucleotide-diphospho-sugar transferases
YYK_05310	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YYK_05315	SSF53448	Nucleotide-diphospho-sugar transferases
YYK_05340	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_05350	SSF53448	Nucleotide-diphospho-sugar transferases
YYK_05355	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YYK_05360	SSF53649	Alkaline phosphatase-like
YYK_05370	SSF53187	Zn-dependent exopeptidases
YYK_05380	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_05385	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_05395	SSF51182	RmlC-like cupins
YYK_05400	SSF53448	Nucleotide-diphospho-sugar transferases
YYK_05410	SSF102705	NIF3 (NGG1p interacting factor 3)-like
YYK_05420	SSF158499	DnaD domain-like
YYK_05425	SSF52317	Class I glutamine amidotransferase-like
YYK_05430	SSF53271	PRTase-like
YYK_05445	SSF64182	DHH phosphoesterases
YYK_05455	SSF53187	Zn-dependent exopeptidases
YYK_05460	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_05465	SSF56281	Metallo-hydrolase/oxidoreductase
YYK_05475	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_05480	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_05490	SSF103473	MFS general substrate transporter
YYK_05495	SSF51726	UROD/MetE-like
YYK_05500	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_05505	SSF140652	YozE-like
YYK_05510	SSF159888	YdhG-like
YYK_05515	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YYK_05515	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_05525	SSF55194	Ribosome recycling factor, RRF
YYK_05530	SSF53633	Carbamate kinase-like
YYK_05535	SSF81665	Calcium ATPase, transmembrane domain M
YYK_05540	SSF47616	GST C-terminal domain-like
YYK_05540	SSF52833	Thioredoxin-like
YYK_05555	SSF46906	Ribosomal protein L11, C-terminal domain
YYK_05555	SSF54747	Ribosomal L11/L12e N-terminal domain
YYK_05565	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
YYK_05570	SSF46785	"Winged helix" DNA-binding domain
YYK_05570	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_05575	SSF49899	Concanavalin A-like lectins/glucanases
YYK_05575	SSF75005	Arabinanase/levansucrase/invertase
YYK_05585	SSF161098	MetI-like
YYK_05595	SSF47413	lambda repressor-like DNA-binding domains
YYK_05595	SSF53822	Periplasmic binding protein-like I
YYK_05605	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
YYK_05615	SSF50891	Cyclophilin-like
YYK_05625	SSF50447	Translation proteins
YYK_05625	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_05625	SSF54980	EF-G C-terminal domain-like
YYK_05630	SSF56784	HAD-like
YYK_05630	SSF81653	Calcium ATPase, transduction domain A
YYK_05630	SSF81665	Calcium ATPase, transmembrane domain M
YYK_05640	SSF53244	MurD-like peptide ligases, peptide-binding domain
YYK_05640	SSF53623	MurD-like peptide ligases, catalytic domain
YYK_05640	SSF63418	MurE/MurF N-terminal domain
YYK_05655	SSF111304	Recombination protein RecR
YYK_05665	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_05670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_05675	SSF56281	Metallo-hydrolase/oxidoreductase
YYK_05680	SSF47384	Homodimeric domain of signal transducing histidine kinase
YYK_05680	SSF55785	PYP-like sensor domain (PAS domain)
YYK_05680	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YYK_05685	SSF46894	C-terminal effector domain of the bipartite response regulators
YYK_05685	SSF52172	CheY-like
YYK_05690	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_05695	SSF53850	Periplasmic binding protein-like II
YYK_05700	SSF161098	MetI-like
YYK_05705	SSF161098	MetI-like
YYK_05710	SSF52954	Class II aaRS ABD-related
YYK_05710	SSF55186	ThrRS/AlaRS common domain
YYK_05710	SSF55681	Class II aaRS and biotin synthetases
YYK_05710	SSF81271	TGS-like
YYK_05725	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YYK_05730	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YYK_05745	SSF53092	Creatinase/prolidase N-terminal domain
YYK_05745	SSF55920	Creatinase/aminopeptidase
YYK_05750	SSF51713	tRNA-guanine transglycosylase
YYK_05760	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_05770	SSF47807	5' to 3' exonuclease, C-terminal subdomain
YYK_05770	SSF53098	Ribonuclease H-like
YYK_05770	SSF56672	DNA/RNA polymerases
YYK_05770	SSF88723	PIN domain-like
YYK_05785	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_05815	SSF51197	Clavaminate synthase-like
YYK_05815	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYK_05820	SSF50129	GroES-like
YYK_05820	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_05825	SSF74982	Small protein B (SmpB)
YYK_05830	SSF50249	Nucleic acid-binding proteins
YYK_05840	SSF57829	Zn-binding ribosomal proteins
YYK_05845	SSF103473	MFS general substrate transporter
YYK_05850	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_05855	SSF46946	S13-like H2TH domain
YYK_05855	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YYK_05855	SSF81624	N-terminal domain of MutM-like DNA repair proteins
YYK_05860	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_05860	SSF54814	Prokaryotic type KH domain (KH-domain type II)
YYK_05870	SSF55486	Metalloproteases ("zincins"), catalytic domain
YYK_05875	SSF46689	Homeodomain-like
YYK_05875	SSF53697	SIS domain
YYK_05880	SSF55604	Glucose permease domain IIB
YYK_05885	SSF51366	Ribulose-phoshate binding barrel
YYK_05890	SSF56978	Perfringolysin
YYK_05905	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_05905	SSF90123	ABC transporter transmembrane region
YYK_05910	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_05910	SSF90123	ABC transporter transmembrane region
YYK_05925	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_05935	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_05940	SSF75620	Release factor
YYK_05980	SSF53098	Ribonuclease H-like
YYK_05990	SSF143422	Transposase IS200-like
YYK_06010	SSF117916	Fe-S cluster assembly (FSCA) domain-like
YYK_06015	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YYK_06015	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YYK_06025	SSF81330	Gated mechanosensitive channel
YYK_06045	SSF56784	HAD-like
YYK_06050	SSF55811	Nudix
YYK_06055	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YYK_06060	SSF102114	Radical SAM enzymes
YYK_06070	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
YYK_06075	SSF53167	Purine and uridine phosphorylases
YYK_06080	SSF53167	Purine and uridine phosphorylases
YYK_06085	SSF52833	Thioredoxin-like
YYK_06090	SSF143856	DeoB insert domain-like
YYK_06090	SSF53649	Alkaline phosphatase-like
YYK_06095	SSF100950	NagB/RpiA/CoA transferase-like
YYK_06095	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
YYK_06100	SSF116734	DNA methylase specificity domain
YYK_06105	SSF116734	DNA methylase specificity domain
YYK_06115	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_06125	SSF50998	Quinoprotein alcohol dehydrogenase-like
YYK_06135	SSF117892	Band 7/SPFH domain
YYK_06140	SSF140478	LemA-like
YYK_06155	SSF52141	Uracil-DNA glycosylase-like
YYK_06165	SSF53187	Zn-dependent exopeptidases
YYK_06165	SSF55031	Bacterial exopeptidase dimerisation domain
YYK_06170	SSF118215	Proton glutamate symport protein
YYK_06175	SSF50494	Trypsin-like serine proteases
YYK_06195	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_06200	SSF53738	Phosphoglucomutase, first 3 domains
YYK_06200	SSF55957	Phosphoglucomutase, C-terminal domain
YYK_06210	SSF143597	YojJ-like
YYK_06215	SSF53623	MurD-like peptide ligases, catalytic domain
YYK_06220	SSF52317	Class I glutamine amidotransferase-like
YYK_06225	SSF53098	Ribonuclease H-like
YYK_06230	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYK_06250	SSF55486	Metalloproteases ("zincins"), catalytic domain
YYK_06255	SSF53474	alpha/beta-Hydrolases
YYK_06260	SSF56281	Metallo-hydrolase/oxidoreductase
YYK_06275	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_06285	SSF53822	Periplasmic binding protein-like I
YYK_06290	SSF51445	(Trans)glycosidases
YYK_06295	SSF51261	Duplicated hybrid motif
YYK_06295	SSF55604	Glucose permease domain IIB
YYK_06310	SSF117856	AF0104/ALDC/Ptd012-like
YYK_06325	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
YYK_06340	SSF143011	RelE-like
YYK_06350	SSF51604	Enolase C-terminal domain-like
YYK_06350	SSF54826	Enolase N-terminal domain-like
YYK_06355	SSF160515	YueI-like
YYK_06365	SSF110738	Glycerate kinase I
YYK_06370	SSF56784	HAD-like
YYK_06390	SSF54211	Ribosomal protein S5 domain 2-like
YYK_06390	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YYK_06390	SSF56719	Type II DNA topoisomerase
YYK_06405	SSF143800	L28p-like
YYK_06410	SSF143631	ApbE-like
YYK_06430	SSF48600	Chorismate mutase II
YYK_06435	SSF81340	Clc chloride channel
YYK_06445	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
YYK_06445	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
YYK_06450	SSF48019	post-AAA+ oligomerization domain-like
YYK_06450	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_06465	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_06470	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_06495	SSF52096	ClpP/crotonase
YYK_06500	SSF53271	PRTase-like
YYK_06515	SSF161098	MetI-like
YYK_06520	SSF161098	MetI-like
YYK_06530	SSF51445	(Trans)glycosidases
YYK_06540	SSF53383	PLP-dependent transferases
YYK_06545	SSF53383	PLP-dependent transferases
YYK_06565	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYK_06580	SSF52218	Flavoproteins
YYK_06585	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YYK_06595	SSF46785	"Winged helix" DNA-binding domain
YYK_06600	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_06610	SSF50729	PH domain-like
YYK_06615	SSF142887	PhtA domain-like
YYK_06615	SSF52058	L domain-like
YYK_06630	SSF53613	Ribokinase-like
YYK_06635	SSF53167	Purine and uridine phosphorylases
YYK_06645	SSF55811	Nudix
YYK_06650	SSF51161	Trimeric LpxA-like enzymes
YYK_06650	SSF53448	Nucleotide-diphospho-sugar transferases
YYK_06655	SSF88697	PUA domain-like
YYK_06665	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_06675	SSF158560	BH3980-like
YYK_06680	SSF46785	"Winged helix" DNA-binding domain
YYK_06700	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_06705	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YYK_06710	SSF52172	CheY-like
YYK_06720	SSF53383	PLP-dependent transferases
YYK_06740	SSF46785	"Winged helix" DNA-binding domain
YYK_06760	SSF53795	PEP carboxykinase-like
YYK_06760	SSF75138	HprK N-terminal domain-like
YYK_06765	SSF51182	RmlC-like cupins
YYK_06770	SSF46689	Homeodomain-like
YYK_06775	SSF53098	Ribonuclease H-like
YYK_06795	SSF47781	RuvA domain 2-like
YYK_06795	SSF50249	Nucleic acid-binding proteins
YYK_06795	SSF53098	Ribonuclease H-like
YYK_06820	SSF55920	Creatinase/aminopeptidase
YYK_06825	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YYK_06835	SSF52218	Flavoproteins
YYK_06840	SSF55973	S-adenosylmethionine synthetase
YYK_06850	SSF54631	CBS-domain pair
YYK_06860	SSF46785	"Winged helix" DNA-binding domain
YYK_06860	SSF50037	C-terminal domain of transcriptional repressors
YYK_06860	SSF55681	Class II aaRS and biotin synthetases
YYK_06870	SSF48019	post-AAA+ oligomerization domain-like
YYK_06870	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_06875	SSF55781	GAF domain-like
YYK_06890	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_06895	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_06895	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YYK_06905	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_06910	SSF144015	Peptidoglycan deacetylase N-terminal noncatalytic region
YYK_06910	SSF88713	Glycoside hydrolase/deacetylase
YYK_06920	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
YYK_06925	SSF143422	Transposase IS200-like
YYK_06935	SSF53254	Phosphoglycerate mutase-like
YYK_06940	SSF53901	Thiolase-like
YYK_06950	SSF55035	NAD-binding domain of HMG-CoA reductase
YYK_06950	SSF56542	Substrate-binding domain of HMG-CoA reductase
YYK_06960	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YYK_06975	SSF47729	IHF-like DNA-binding proteins
YYK_06985	SSF52266	SGNH hydrolase
YYK_06990	SSF82549	DAK1/DegV-like
YYK_07000	SSF46785	"Winged helix" DNA-binding domain
YYK_07000	SSF55252	C-terminal domain of arginine repressor
YYK_07005	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYK_07005	SSF55174	Alpha-L RNA-binding motif
YYK_07010	SSF48576	Terpenoid synthases
YYK_07015	SSF116842	XseB-like
YYK_07025	SSF55486	Metalloproteases ("zincins"), catalytic domain
YYK_07035	SSF47384	Homodimeric domain of signal transducing histidine kinase
YYK_07035	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YYK_07040	SSF46894	C-terminal effector domain of the bipartite response regulators
YYK_07040	SSF52172	CheY-like
YYK_07050	SSF53300	vWA-like
YYK_07070	SSF64182	DHH phosphoesterases
YYK_07080	SSF102114	Radical SAM enzymes
YYK_07085	SSF54631	CBS-domain pair
YYK_07085	SSF56176	FAD-binding/transporter-associated domain-like
YYK_07090	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_07095	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYK_07105	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
YYK_07105	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
YYK_07110	SSF52402	Adenine nucleotide alpha hydrolases-like
YYK_07120	SSF102114	Radical SAM enzymes
YYK_07135	SSF52374	Nucleotidylyl transferase
YYK_07140	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYK_07150	SSF52821	Rhodanese/Cell cycle control phosphatase
YYK_07155	SSF158379	YqgQ-like
YYK_07160	SSF46894	C-terminal effector domain of the bipartite response regulators
YYK_07160	SSF52172	CheY-like
YYK_07165	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YYK_07175	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_07180	SSF47240	Ferritin-like
YYK_07195	SSF82185	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
YYK_07205	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
YYK_07215	SSF75217	alpha/beta knot
YYK_07230	SSF55120	Pseudouridine synthase
YYK_07230	SSF55174	Alpha-L RNA-binding motif
YYK_07235	SSF46785	"Winged helix" DNA-binding domain
YYK_07245	SSF56349	DNA breaking-rejoining enzymes
YYK_07250	SSF54631	CBS-domain pair
YYK_07260	SSF52972	ITPase-like
YYK_07265	SSF53681	Aspartate/glutamate racemase
YYK_07275	SSF50621	Alanine racemase C-terminal domain-like
YYK_07275	SSF51419	PLP-binding barrel
YYK_07280	SSF54001	Cysteine proteinases
YYK_07290	SSF109604	HD-domain/PDEase-like
YYK_07295	SSF55315	L30e-like
YYK_07295	SSF75217	alpha/beta knot
YYK_07310	SSF46557	GreA transcript cleavage protein, N-terminal domain
YYK_07310	SSF54534	FKBP-like
YYK_07325	SSF51984	MurCD N-terminal domain
YYK_07325	SSF53244	MurD-like peptide ligases, peptide-binding domain
YYK_07325	SSF53623	MurD-like peptide ligases, catalytic domain
YYK_07350	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_07355	SSF55469	FMN-dependent nitroreductase-like
YYK_07360	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_07380	SSF46894	C-terminal effector domain of the bipartite response regulators
YYK_07380	SSF52172	CheY-like
YYK_07385	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YYK_07385	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_07395	SSF51905	FAD/NAD(P)-binding domain
YYK_07405	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_07420	SSF54184	Penicillin-binding protein 2x (pbp-2x), c-terminal domain
YYK_07420	SSF56519	Penicillin binding protein dimerisation domain
YYK_07420	SSF56601	beta-lactamase/transpeptidase-like
YYK_07430	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYK_07430	SSF81799	Putative methyltransferase TM0872, insert domain
YYK_07435	SSF47413	lambda repressor-like DNA-binding domains
YYK_07485	SSF48576	Terpenoid synthases
YYK_07490	SSF51905	FAD/NAD(P)-binding domain
YYK_07505	SSF116726	TrkA C-terminal domain-like
YYK_07505	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_07520	SSF158221	YnzC-like
YYK_07525	SSF109604	HD-domain/PDEase-like
YYK_07530	SSF55681	Class II aaRS and biotin synthetases
YYK_07535	SSF160419	YdfO-like
YYK_07540	SSF56037	PheT/TilS domain
YYK_07545	SSF161098	MetI-like
YYK_07555	SSF53187	Zn-dependent exopeptidases
YYK_07560	SSF53850	Periplasmic binding protein-like II
YYK_07565	SSF52317	Class I glutamine amidotransferase-like
YYK_07570	SSF51726	UROD/MetE-like
YYK_07575	SSF51730	FAD-linked oxidoreductase
YYK_07610	SSF46589	tRNA-binding arm
YYK_07610	SSF55681	Class II aaRS and biotin synthetases
YYK_07620	SSF116734	DNA methylase specificity domain
YYK_07625	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_07635	SSF56349	DNA breaking-rejoining enzymes
YYK_07655	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YYK_07660	SSF52096	ClpP/crotonase
YYK_07665	SSF52096	ClpP/crotonase
YYK_07670	SSF51246	Rudiment single hybrid motif
YYK_07670	SSF52440	PreATP-grasp domain
YYK_07670	SSF56059	Glutathione synthetase ATP-binding domain-like
YYK_07675	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YYK_07680	SSF51230	Single hybrid motif
YYK_07685	SSF53901	Thiolase-like
YYK_07690	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_07700	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
YYK_07705	SSF47336	ACP-like
YYK_07710	SSF53901	Thiolase-like
YYK_07720	SSF52096	ClpP/crotonase
YYK_07725	SSF56784	HAD-like
YYK_07735	SSF50621	Alanine racemase C-terminal domain-like
YYK_07735	SSF51419	PLP-binding barrel
YYK_07740	SSF56214	4'-phosphopantetheinyl transferase
YYK_07745	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_07745	SSF81767	Pre-protein crosslinking domain of SecA
YYK_07745	SSF81886	Helical scaffold and wing domains of SecA
YYK_07750	SSF54001	Cysteine proteinases
YYK_07760	SSF51261	Duplicated hybrid motif
YYK_07760	SSF55604	Glucose permease domain IIB
YYK_07770	SSF47413	lambda repressor-like DNA-binding domains
YYK_07770	SSF53822	Periplasmic binding protein-like I
YYK_07775	SSF48013	NusB-like
YYK_07795	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_07800	SSF143865	CorA soluble domain-like
YYK_07800	SSF144083	Magnesium transport protein CorA, transmembrane region
YYK_07810	SSF46911	Ribosomal protein S18
YYK_07815	SSF50249	Nucleic acid-binding proteins
YYK_07820	SSF54995	Ribosomal protein S6
YYK_07825	SSF53098	Ribonuclease H-like
YYK_07830	SSF55681	Class II aaRS and biotin synthetases
YYK_07830	SSF82649	SufE/NifU
YYK_07840	SSF51230	Single hybrid motif
YYK_07840	SSF51905	FAD/NAD(P)-binding domain
YYK_07840	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
YYK_07845	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
YYK_07845	SSF51230	Single hybrid motif
YYK_07845	SSF52777	CoA-dependent acyltransferases
YYK_07850	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YYK_07850	SSF52922	TK C-terminal domain-like
YYK_07875	SSF89919	Ribosome-binding factor A, RbfA
YYK_07880	SSF50447	Translation proteins
YYK_07880	SSF52156	Initiation factor IF2/eIF5b, domain 3
YYK_07880	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_07885	SSF55315	L30e-like
YYK_07890	SSF64376	YlxR-like
YYK_07895	SSF50249	Nucleic acid-binding proteins
YYK_07895	SSF54814	Prokaryotic type KH domain (KH-domain type II)
YYK_07895	SSF69705	Transcription factor NusA, N-terminal domain
YYK_07900	SSF74942	YhbC-like, C-terminal domain
YYK_07900	SSF75420	YhbC-like, N-terminal domain
YYK_07905	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYK_07910	SSF56112	Protein kinase-like (PK-like)
YYK_07920	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_07925	SSF54197	HIT-like
YYK_07950	SSF101473	DhaL-like
YYK_07970	SSF161098	MetI-like
YYK_07975	SSF161098	MetI-like
YYK_07980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_07985	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_07990	SSF53850	Periplasmic binding protein-like II
YYK_07995	SSF56601	beta-lactamase/transpeptidase-like
YYK_07995	SSF69189	Penicillin-binding protein associated domain
YYK_08000	SSF101960	Stabilizer of iron transporter SufD
YYK_08010	SSF53383	PLP-dependent transferases
YYK_08020	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_08040	SSF161098	MetI-like
YYK_08040	SSF53850	Periplasmic binding protein-like II
YYK_08055	SSF117892	Band 7/SPFH domain
YYK_08060	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
YYK_08060	SSF55021	ACT-like
YYK_08065	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YYK_08065	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_08070	SSF55021	ACT-like
YYK_08085	SSF53448	Nucleotide-diphospho-sugar transferases
YYK_08095	SSF143975	IlvD/EDD N-terminal domain-like
YYK_08095	SSF52016	LeuD/IlvD-like
YYK_08105	SSF117916	Fe-S cluster assembly (FSCA) domain-like
YYK_08115	SSF50475	FMN-binding split barrel
YYK_08120	SSF54211	Ribosomal protein S5 domain 2-like
YYK_08125	SSF52161	Ribosomal protein L13
YYK_08130	SSF82549	DAK1/DegV-like
YYK_08140	SSF55315	L30e-like
YYK_08140	SSF75217	alpha/beta knot
YYK_08170	SSF46689	Homeodomain-like
YYK_08175	SSF46689	Homeodomain-like
YYK_08175	SSF52172	CheY-like
YYK_08180	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YYK_08200	SSF53850	Periplasmic binding protein-like II
YYK_08205	SSF161098	MetI-like
YYK_08215	SSF51445	(Trans)glycosidases
YYK_08230	SSF48208	Six-hairpin glycosidases
YYK_08235	SSF48208	Six-hairpin glycosidases
YYK_08245	SSF69065	RNase III domain-like
YYK_08250	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YYK_08250	SSF52374	Nucleotidylyl transferase
YYK_08260	SSF53167	Purine and uridine phosphorylases
YYK_08265	SSF51161	Trimeric LpxA-like enzymes
YYK_08270	SSF46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
YYK_08270	SSF50249	Nucleic acid-binding proteins
YYK_08270	SSF54211	Ribosomal protein S5 domain 2-like
YYK_08270	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
YYK_08270	SSF55666	Ribonuclease PH domain 2-like
YYK_08275	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YYK_08280	SSF50891	Cyclophilin-like
YYK_08290	SSF51445	(Trans)glycosidases
YYK_08305	SSF46689	Homeodomain-like
YYK_08305	SSF53697	SIS domain
YYK_08310	SSF47060	S15/NS1 RNA-binding domain
YYK_08330	SSF55120	Pseudouridine synthase
YYK_08330	SSF55174	Alpha-L RNA-binding motif
YYK_08335	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YYK_08350	SSF56420	Peptide deformylase
YYK_08355	SSF55821	YrdC/RibB
YYK_08360	SSF52016	LeuD/IlvD-like
YYK_08365	SSF53732	Aconitase iron-sulfur domain
YYK_08370	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
YYK_08375	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
YYK_08375	SSF51569	Aldolase
YYK_08385	SSF144052	Thermophilic metalloprotease-like
YYK_08395	SSF140478	LemA-like
YYK_08400	SSF50249	Nucleic acid-binding proteins
YYK_08400	SSF53098	Ribonuclease H-like
YYK_08400	SSF89550	PHP domain-like
YYK_08405	SSF82549	DAK1/DegV-like
YYK_08410	SSF46689	Homeodomain-like
YYK_08415	SSF82549	DAK1/DegV-like
YYK_08420	SSF101473	DhaL-like
YYK_08425	SSF53062	PTS system fructose IIA component-like
YYK_08430	SSF81338	Aquaporin-like
YYK_08435	SSF52954	Class II aaRS ABD-related
YYK_08435	SSF55681	Class II aaRS and biotin synthetases
YYK_08435	SSF55826	YbaK/ProRS associated domain
YYK_08440	SSF50156	PDZ domain-like
YYK_08460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_08465	SSF55931	Glutamine synthetase/guanido kinase
YYK_08465	SSF56059	Glutathione synthetase ATP-binding domain-like
YYK_08475	SSF118352	HSP33 redox switch-like
YYK_08475	SSF64397	Hsp33 domain
YYK_08485	SSF55811	Nudix
YYK_08495	SSF52374	Nucleotidylyl transferase
YYK_08495	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_08500	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_08500	SSF81923	Double Clp-N motif
YYK_08510	SSF52833	Thioredoxin-like
YYK_08525	SSF52313	Ribosomal protein S2
YYK_08535	SSF52025	PA domain
YYK_08535	SSF52743	Subtilisin-like
YYK_08555	SSF53955	Lysozyme-like
YYK_08555	SSF56601	beta-lactamase/transpeptidase-like
YYK_08560	SSF51905	FAD/NAD(P)-binding domain
YYK_08565	SSF55120	Pseudouridine synthase
YYK_08570	SSF46785	"Winged helix" DNA-binding domain
YYK_08570	SSF53271	PRTase-like
YYK_08575	SSF56112	Protein kinase-like (PK-like)
YYK_08595	SSF63999	Thiamin pyrophosphokinase, catalytic domain
YYK_08600	SSF51366	Ribulose-phoshate binding barrel
YYK_08605	SSF50249	Nucleic acid-binding proteins
YYK_08605	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_08610	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_08610	SSF90123	ABC transporter transmembrane region
YYK_08615	SSF102114	Radical SAM enzymes
YYK_08625	SSF47413	lambda repressor-like DNA-binding domains
YYK_08645	SSF160379	SP0830-like
YYK_08655	SSF143120	YefM-like
YYK_08660	SSF55811	Nudix
YYK_08685	SSF51556	Metallo-dependent hydrolases
YYK_08705	SSF54211	Ribosomal protein S5 domain 2-like
YYK_08710	SSF48557	L-aspartase-like
YYK_08715	SSF52402	Adenine nucleotide alpha hydrolases-like
YYK_08715	SSF69864	Argininosuccinate synthetase, C-terminal domain
YYK_08735	SSF55811	Nudix
YYK_08750	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
YYK_08750	SSF52374	Nucleotidylyl transferase
YYK_08755	SSF103473	MFS general substrate transporter
YYK_08775	SSF53056	beta-carbonic anhydrase, cab
YYK_08780	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_08780	SSF54211	Ribosomal protein S5 domain 2-like
YYK_08785	SSF53254	Phosphoglycerate mutase-like
YYK_08790	SSF51283	dUTPase-like
YYK_08795	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_08795	SSF90123	ABC transporter transmembrane region
YYK_08800	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_08800	SSF90123	ABC transporter transmembrane region
YYK_08805	SSF46785	"Winged helix" DNA-binding domain
YYK_08810	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YYK_08810	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_08815	SSF53448	Nucleotide-diphospho-sugar transferases
YYK_08820	SSF144091	Rhomboid-like
YYK_08825	SSF100950	NagB/RpiA/CoA transferase-like
YYK_08830	SSF53187	Zn-dependent exopeptidases
YYK_08830	SSF55031	Bacterial exopeptidase dimerisation domain
YYK_08835	SSF51161	Trimeric LpxA-like enzymes
YYK_08865	SSF53927	Cytidine deaminase-like
YYK_08875	SSF56281	Metallo-hydrolase/oxidoreductase
YYK_08890	SSF53639	AraD/HMP-PK domain-like
YYK_08895	SSF51658	Xylose isomerase-like
YYK_08900	SSF51366	Ribulose-phoshate binding barrel
YYK_08905	SSF55804	Phoshotransferase/anion transport protein
YYK_08910	SSF52794	PTS system IIB component-like
YYK_08920	SSF49452	Starch-binding domain-like
YYK_08920	SSF51445	(Trans)glycosidases
YYK_08920	SSF81296	E set domains
YYK_08925	SSF47413	lambda repressor-like DNA-binding domains
YYK_08925	SSF53822	Periplasmic binding protein-like I
YYK_08930	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_08935	SSF161098	MetI-like
YYK_08940	SSF53850	Periplasmic binding protein-like II
YYK_08945	SSF54001	Cysteine proteinases
YYK_08955	SSF55961	Bet v1-like
YYK_08960	SSF46973	Enzyme IIa from lactose specific PTS, IIa-lac
YYK_08965	SSF52794	PTS system IIB component-like
YYK_08970	SSF46894	C-terminal effector domain of the bipartite response regulators
YYK_08970	SSF52794	PTS system IIB component-like
YYK_08970	SSF55804	Phoshotransferase/anion transport protein
YYK_08970	SSF63520	PTS-regulatory domain, PRD
YYK_08975	SSF50891	Cyclophilin-like
YYK_08975	SSF51445	(Trans)glycosidases
YYK_08980	SSF51445	(Trans)glycosidases
YYK_08985	SSF51735	NAD(P)-binding Rossmann-fold domains
YYK_08985	SSF56327	LDH C-terminal domain-like
YYK_08990	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YYK_08990	SSF50677	ValRS/IleRS/LeuRS editing domain
YYK_08990	SSF52374	Nucleotidylyl transferase
YYK_08995	SSF55486	Metalloproteases ("zincins"), catalytic domain
YYK_09010	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_09025	SSF46785	"Winged helix" DNA-binding domain
YYK_09025	SSF47979	Iron-dependent repressor protein, dimerization domain
YYK_09040	SSF52172	CheY-like
YYK_09055	SSF69500	DTD-like
YYK_09060	SSF109604	HD-domain/PDEase-like
YYK_09060	SSF55021	ACT-like
YYK_09060	SSF81271	TGS-like
YYK_09060	SSF81301	Nucleotidyltransferase
YYK_09065	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
YYK_09065	SSF56300	Metallo-dependent phosphatases
YYK_09070	SSF63817	Sortase
YYK_09075	SSF63817	Sortase
YYK_09080	SSF63817	Sortase
YYK_09085	SSF49478	Cna protein B-type domain
YYK_09100	SSF49478	Cna protein B-type domain
YYK_09100	SSF49785	Galactose-binding domain-like
YYK_09105	SSF49401	Bacterial adhesins
YYK_09105	SSF49478	Cna protein B-type domain
YYK_09125	SSF88697	PUA domain-like
YYK_09135	SSF101386	all-alpha NTP pyrophosphatases
YYK_09140	SSF48019	post-AAA+ oligomerization domain-like
YYK_09140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_09145	SSF102114	Radical SAM enzymes
YYK_09160	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
YYK_09160	SSF56300	Metallo-dependent phosphatases
YYK_09200	SSF46785	"Winged helix" DNA-binding domain
YYK_09200	SSF55252	C-terminal domain of arginine repressor
YYK_09205	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YYK_09205	SSF52374	Nucleotidylyl transferase
YYK_09205	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
YYK_09225	SSF51445	(Trans)glycosidases
YYK_09230	SSF53850	Periplasmic binding protein-like II
YYK_09235	SSF160964	MalF N-terminal region-like
YYK_09235	SSF161098	MetI-like
YYK_09240	SSF161098	MetI-like
YYK_09250	SSF47413	lambda repressor-like DNA-binding domains
YYK_09250	SSF53822	Periplasmic binding protein-like I
YYK_09260	SSF52218	Flavoproteins
YYK_09300	SSF51445	(Trans)glycosidases
YYK_09300	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
YYK_09315	SSF56300	Metallo-dependent phosphatases
YYK_09325	SSF52833	Thioredoxin-like
YYK_09330	SSF55174	Alpha-L RNA-binding motif
YYK_09340	SSF48024	N-terminal domain of DnaB helicase
YYK_09340	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_09355	SSF51905	FAD/NAD(P)-binding domain
YYK_09365	SSF55811	Nudix
YYK_09375	SSF46785	"Winged helix" DNA-binding domain
YYK_09385	SSF52402	Adenine nucleotide alpha hydrolases-like
YYK_09390	SSF143548	Serine metabolism enzymes domain
YYK_09390	SSF55021	ACT-like
YYK_09410	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_09415	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_09425	SSF47413	lambda repressor-like DNA-binding domains
YYK_09435	SSF63411	LuxS/MPP-like metallohydrolase
YYK_09450	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYK_09455	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
YYK_09455	SSF54631	CBS-domain pair
YYK_09490	SSF75217	alpha/beta knot
YYK_09495	SSF50156	PDZ domain-like
YYK_09495	SSF50494	Trypsin-like serine proteases