SHJG_0110	PWY-6527	stachyose degradation
SHJG_0164	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
SHJG_0164	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SHJG_0172	PWY-6785	hydrogen production VIII
SHJG_0241	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
SHJG_0241	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
SHJG_0241	PWY-7242	D-fructuronate degradation
SHJG_0241	PWY-7310	D-glucosaminate degradation
SHJG_0246	PWY-6527	stachyose degradation
SHJG_0276	PWY-6164	3-dehydroquinate biosynthesis I
SHJG_0308	PWY-4381	fatty acid biosynthesis initiation I
SHJG_0353	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
SHJG_0402	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
SHJG_0424	PWY-6167	flavin biosynthesis II (archaea)
SHJG_0437	PWY-5331	taurine biosynthesis
SHJG_0439	PWY-5506	methanol oxidation to formaldehyde IV
SHJG_0457	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHJG_0457	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHJG_0462	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
SHJG_0462	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SHJG_0495	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SHJG_0495	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SHJG_0579	PWY-2723	trehalose degradation V
SHJG_0579	PWY-6317	galactose degradation I (Leloir pathway)
SHJG_0579	PWY-6737	starch degradation V
SHJG_0603	PWY-4983	L-citrulline-nitric oxide cycle
SHJG_0603	PWY-4984	urea cycle
SHJG_0603	PWY-5	canavanine biosynthesis
SHJG_0603	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SHJG_0603	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SHJG_0606	PWY-5443	aminopropanol phosphate biosynthesis I
SHJG_0621	PWY-6420	pyrroloquinoline quinone biosynthesis
SHJG_0656	PWY-3781	aerobic respiration I (cytochrome c)
SHJG_0656	PWY-4521	arsenite oxidation I (respiratory)
SHJG_0656	PWY-6692	Fe(II) oxidation
SHJG_0656	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SHJG_0657	PWY-3781	aerobic respiration I (cytochrome c)
SHJG_0657	PWY-4521	arsenite oxidation I (respiratory)
SHJG_0657	PWY-6692	Fe(II) oxidation
SHJG_0657	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SHJG_0680	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHJG_0680	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHJG_0701	PWY-5350	thiosulfate disproportionation III (rhodanese)
SHJG_0717	PWY-4381	fatty acid biosynthesis initiation I
SHJG_0725	PWY-2301	<i>myo</i>-inositol biosynthesis
SHJG_0725	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
SHJG_0725	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
SHJG_0725	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
SHJG_0725	PWY-6664	di-myo-inositol phosphate biosynthesis
SHJG_0745	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
SHJG_0745	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SHJG_0748	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
SHJG_0748	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SHJG_0765	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHJG_0765	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHJG_0780	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
SHJG_0780	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
SHJG_0788	PWY-4381	fatty acid biosynthesis initiation I
SHJG_0832	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
SHJG_0832	PWY-581	indole-3-acetate biosynthesis II
SHJG_0832	PWY-7308	acrylonitrile degradation I
SHJG_0833	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
SHJG_0833	PWY-581	indole-3-acetate biosynthesis II
SHJG_0833	PWY-7308	acrylonitrile degradation I
SHJG_0834	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
SHJG_0834	PWY-581	indole-3-acetate biosynthesis II
SHJG_0834	PWY-7308	acrylonitrile degradation I
SHJG_0873	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
SHJG_0938	PWY-6497	D-galactarate degradation II
SHJG_0938	PWY-6499	D-glucarate degradation II
SHJG_0944	PWY-7285	methylwyosine biosynthesis
SHJG_0944	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
SHJG_0995	PWY-6840	homoglutathione biosynthesis
SHJG_0995	PWY-7255	ergothioneine biosynthesis I (bacteria)
SHJG_1018	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
SHJG_1048	PWY-6527	stachyose degradation
SHJG_1064	PWY-6695	oxalate degradation II
SHJG_1065	PWY-6695	oxalate degradation II
SHJG_1065	PWY-6696	oxalate degradation III
SHJG_1158	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
SHJG_1191	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
SHJG_1191	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
SHJG_1208	PWY-6654	phosphopantothenate biosynthesis III
SHJG_1245	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
SHJG_1246	PWY-5169	cyanurate degradation
SHJG_1246	PWY-5703	urea degradation I
SHJG_1251	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
SHJG_1251	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
SHJG_1263	PWY-6012	acyl carrier protein metabolism I
SHJG_1263	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
SHJG_1314	PWY-6454	vancomycin resistance I
SHJG_1314	PWY-6455	vancomycin resistance II
SHJG_1320	PWY-5194	siroheme biosynthesis
SHJG_1320	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SHJG_1340	PWY-5344	L-homocysteine biosynthesis
SHJG_1341	PWY-5344	L-homocysteine biosynthesis
SHJG_1341	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
SHJG_1344	PWY-5344	L-homocysteine biosynthesis
SHJG_1344	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
SHJG_1404	PWY-7533	gliotoxin biosynthesis
SHJG_1484	PWY-5480	pyruvate fermentation to ethanol I
SHJG_1484	PWY-5485	pyruvate fermentation to acetate IV
SHJG_1484	PWY-5493	reductive monocarboxylic acid cycle
SHJG_1488	PWY-3162	L-tryptophan degradation V (side chain pathway)
SHJG_1488	PWY-5057	L-valine degradation II
SHJG_1488	PWY-5076	L-leucine degradation III
SHJG_1488	PWY-5078	L-isoleucine degradation II
SHJG_1488	PWY-5079	L-phenylalanine degradation III
SHJG_1488	PWY-5082	L-methionine degradation III
SHJG_1488	PWY-5162	2-oxopentenoate degradation
SHJG_1488	PWY-5436	L-threonine degradation IV
SHJG_1488	PWY-5480	pyruvate fermentation to ethanol I
SHJG_1488	PWY-5486	pyruvate fermentation to ethanol II
SHJG_1488	PWY-5751	phenylethanol biosynthesis
SHJG_1488	PWY-6028	acetoin degradation
SHJG_1488	PWY-6313	serotonin degradation
SHJG_1488	PWY-6333	acetaldehyde biosynthesis I
SHJG_1488	PWY-6342	noradrenaline and adrenaline degradation
SHJG_1488	PWY-6587	pyruvate fermentation to ethanol III
SHJG_1488	PWY-6802	salidroside biosynthesis
SHJG_1488	PWY-6871	3-methylbutanol biosynthesis
SHJG_1488	PWY-7013	L-1,2-propanediol degradation
SHJG_1488	PWY-7085	triethylamine degradation
SHJG_1488	PWY-7111	pyruvate fermentation to isobutanol (engineered)
SHJG_1488	PWY-7118	chitin degradation to ethanol
SHJG_1488	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
SHJG_1488	PWY-7396	butanol and isobutanol biosynthesis (engineered)
SHJG_1488	PWY-7557	dehydrodiconiferyl alcohol degradation
SHJG_1494	PWY-4981	L-proline biosynthesis II (from arginine)
SHJG_1495	PWY-4981	L-proline biosynthesis II (from arginine)
SHJG_1495	PWY-4984	urea cycle
SHJG_1495	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SHJG_1503	PWY-1042	glycolysis IV (plant cytosol)
SHJG_1503	PWY-5484	glycolysis II (from fructose 6-phosphate)
SHJG_1503	PWY-6901	superpathway of glucose and xylose degradation
SHJG_1503	PWY-7003	glycerol degradation to butanol
SHJG_1508	PWY-5392	reductive TCA cycle II
SHJG_1508	PWY-5537	pyruvate fermentation to acetate V
SHJG_1508	PWY-5538	pyruvate fermentation to acetate VI
SHJG_1508	PWY-5690	TCA cycle II (plants and fungi)
SHJG_1508	PWY-5913	TCA cycle VI (obligate autotrophs)
SHJG_1508	PWY-6728	methylaspartate cycle
SHJG_1508	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHJG_1508	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SHJG_1510	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
SHJG_1510	PWY-6549	L-glutamine biosynthesis III
SHJG_1510	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SHJG_1510	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
SHJG_1511	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
SHJG_1511	PWY-6549	L-glutamine biosynthesis III
SHJG_1511	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SHJG_1511	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
SHJG_1512	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
SHJG_1512	PWY-6549	L-glutamine biosynthesis III
SHJG_1512	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SHJG_1512	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
SHJG_1518	PWY-3781	aerobic respiration I (cytochrome c)
SHJG_1518	PWY-4521	arsenite oxidation I (respiratory)
SHJG_1518	PWY-6692	Fe(II) oxidation
SHJG_1518	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SHJG_1570	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
SHJG_1570	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SHJG_1570	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SHJG_1570	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
SHJG_1649	PWY-6807	xyloglucan degradation II (exoglucanase)
SHJG_1655	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
SHJG_1655	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
SHJG_1655	PWY-6920	6-gingerol analog biosynthesis
SHJG_1655	PWY-7007	methyl ketone biosynthesis
SHJG_1655	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
SHJG_1655	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
SHJG_1655	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
SHJG_1655	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
SHJG_1655	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
SHJG_1655	PWY-735	jasmonic acid biosynthesis
SHJG_1664	PWY-5087	L-glutamate degradation VI (to pyruvate)
SHJG_1664	PWY-5103	L-isoleucine biosynthesis III
SHJG_1664	PWY-6728	methylaspartate cycle
SHJG_1709	PWY-4381	fatty acid biosynthesis initiation I
SHJG_1710	PWY-5971	palmitate biosynthesis II (bacteria and plants)
SHJG_1710	PWY-5973	<i>cis</i>-vaccenate biosynthesis
SHJG_1710	PWY-5989	stearate biosynthesis II (bacteria and plants)
SHJG_1710	PWY-6113	superpathway of mycolate biosynthesis
SHJG_1710	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
SHJG_1710	PWY-6519	8-amino-7-oxononanoate biosynthesis I
SHJG_1710	PWY-7096	triclosan resistance
SHJG_1710	PWYG-321	mycolate biosynthesis
SHJG_1739	PWY-5101	L-isoleucine biosynthesis II
SHJG_1739	PWY-5103	L-isoleucine biosynthesis III
SHJG_1739	PWY-5104	L-isoleucine biosynthesis IV
SHJG_1739	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
SHJG_1739	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
SHJG_1739	PWY-6389	(<i>S</i>)-acetoin biosynthesis
SHJG_1739	PWY-7111	pyruvate fermentation to isobutanol (engineered)
SHJG_1740	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
SHJG_1786	PWY-5451	acetone degradation I (to methylglyoxal)
SHJG_1786	PWY-6588	pyruvate fermentation to acetone
SHJG_1786	PWY-6876	isopropanol biosynthesis
SHJG_1786	PWY-7466	acetone degradation III (to propane-1,2-diol)
SHJG_1789	PWY-381	nitrate reduction II (assimilatory)
SHJG_1789	PWY-5675	nitrate reduction V (assimilatory)
SHJG_1789	PWY-6549	L-glutamine biosynthesis III
SHJG_1789	PWY-6963	ammonia assimilation cycle I
SHJG_1789	PWY-6964	ammonia assimilation cycle II
SHJG_1806	PWY-6527	stachyose degradation
SHJG_1825	PWY-1042	glycolysis IV (plant cytosol)
SHJG_1825	PWY-5484	glycolysis II (from fructose 6-phosphate)
SHJG_1825	PWY-6901	superpathway of glucose and xylose degradation
SHJG_1825	PWY-7003	glycerol degradation to butanol
SHJG_1840	PWY-6785	hydrogen production VIII
SHJG_1843	PWY-1622	formaldehyde assimilation I (serine pathway)
SHJG_1843	PWY-181	photorespiration
SHJG_1843	PWY-2161	folate polyglutamylation
SHJG_1843	PWY-2201	folate transformations I
SHJG_1843	PWY-3661	glycine betaine degradation I
SHJG_1843	PWY-3661-1	glycine betaine degradation II (mammalian)
SHJG_1843	PWY-3841	folate transformations II
SHJG_1843	PWY-5497	purine nucleobases degradation II (anaerobic)
SHJG_1894	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
SHJG_1909	PWY-5087	L-glutamate degradation VI (to pyruvate)
SHJG_1909	PWY-5103	L-isoleucine biosynthesis III
SHJG_1909	PWY-6728	methylaspartate cycle
SHJG_1929	PWY-7106	erythromycin D biosynthesis
SHJG_1955	PWY-3861	mannitol degradation II
SHJG_1955	PWY-3881	mannitol biosynthesis
SHJG_1955	PWY-5659	GDP-mannose biosynthesis
SHJG_1955	PWY-7456	mannan degradation
SHJG_1955	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
SHJG_1995	PWY-2723	trehalose degradation V
SHJG_1995	PWY-3801	sucrose degradation II (sucrose synthase)
SHJG_1995	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
SHJG_1995	PWY-5661	GDP-glucose biosynthesis
SHJG_1995	PWY-5661-1	SHJG_1995
SHJG_1995	PWY-5940	streptomycin biosynthesis
SHJG_1995	PWY-5941	glycogen degradation II (eukaryotic)
SHJG_1995	PWY-622	starch biosynthesis
SHJG_1995	PWY-6731	starch degradation III
SHJG_1995	PWY-6737	starch degradation V
SHJG_1995	PWY-6749	CMP-legionaminate biosynthesis I
SHJG_1995	PWY-7238	sucrose biosynthesis II
SHJG_1995	PWY-7343	UDP-glucose biosynthesis
SHJG_2012	PWY-7425	2-chloroacrylate degradation I
SHJG_2016	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
SHJG_2035	PWY-1042	glycolysis IV (plant cytosol)
SHJG_2035	PWY-5484	glycolysis II (from fructose 6-phosphate)
SHJG_2035	PWY-6901	superpathway of glucose and xylose degradation
SHJG_2035	PWY-7003	glycerol degradation to butanol
SHJG_2084	PWY-4261	glycerol degradation I
SHJG_2087	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SHJG_2087	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
SHJG_2098	PWY-2622	trehalose biosynthesis IV
SHJG_2100	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
SHJG_2100	PWY-622	starch biosynthesis
SHJG_2101	PWY-6840	homoglutathione biosynthesis
SHJG_2101	PWY-7255	ergothioneine biosynthesis I (bacteria)
SHJG_2134	PWY-6527	stachyose degradation
SHJG_2169	PWY-6609	adenine and adenosine salvage III
SHJG_2169	PWY-6611	adenine and adenosine salvage V
SHJG_2169	PWY-7179	purine deoxyribonucleosides degradation I
SHJG_2169	PWY-7179-1	purine deoxyribonucleosides degradation
SHJG_2174	PWY-6902	chitin degradation II
SHJG_2210	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
SHJG_2216	PWY-1341	phenylacetate degradation II (anaerobic)
SHJG_2216	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
SHJG_2218	PWY-723	alkylnitronates degradation
SHJG_2300	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SHJG_2304	PWY-5392	reductive TCA cycle II
SHJG_2304	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SHJG_2304	PWY-5690	TCA cycle II (plants and fungi)
SHJG_2304	PWY-5913	TCA cycle VI (obligate autotrophs)
SHJG_2304	PWY-6728	methylaspartate cycle
SHJG_2304	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHJG_2304	PWY-7254	TCA cycle VII (acetate-producers)
SHJG_2304	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SHJG_2312	PWY-6807	xyloglucan degradation II (exoglucanase)
SHJG_2333	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
SHJG_2333	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
SHJG_2333	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
SHJG_2337	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SHJG_2391	PWY-2941	L-lysine biosynthesis II
SHJG_2391	PWY-2942	L-lysine biosynthesis III
SHJG_2391	PWY-5097	L-lysine biosynthesis VI
SHJG_2431	PWY-6420	pyrroloquinoline quinone biosynthesis
SHJG_2436	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SHJG_2438	PWY-6672	<i>cis</i>-genanyl-CoA degradation
SHJG_2438	PWY-7118	chitin degradation to ethanol
SHJG_2441	PWY-6167	flavin biosynthesis II (archaea)
SHJG_2446	PWY-6509	methanol oxidation to formaldehyde III
SHJG_2460	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
SHJG_2460	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
SHJG_2460	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
SHJG_2461	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
SHJG_2461	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
SHJG_2461	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
SHJG_2462	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
SHJG_2462	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
SHJG_2470	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
SHJG_2471	PWY-5530	sorbitol biosynthesis II
SHJG_2471	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SHJG_2479	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHJG_2479	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHJG_2526	PWY-6527	stachyose degradation
SHJG_2601	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
SHJG_2601	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SHJG_2620	PWY-4261	glycerol degradation I
SHJG_2645	PWY-5080	very long chain fatty acid biosynthesis I
SHJG_2645	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
SHJG_2645	PWY-7036	very long chain fatty acid biosynthesis II
SHJG_2653	PWY-1042	glycolysis IV (plant cytosol)
SHJG_2653	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SHJG_2653	PWY-5484	glycolysis II (from fructose 6-phosphate)
SHJG_2653	PWY-7385	1,3-propanediol biosynthesis (engineered)
SHJG_2657	PWY-4981	L-proline biosynthesis II (from arginine)
SHJG_2658	PWY-3341	L-proline biosynthesis III
SHJG_2658	PWY-4981	L-proline biosynthesis II (from arginine)
SHJG_2658	PWY-6344	L-ornithine degradation II (Stickland reaction)
SHJG_2658	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
SHJG_2668	PWY-5704	urea degradation II
SHJG_2669	PWY-5704	urea degradation II
SHJG_2670	PWY-5704	urea degradation II
SHJG_2679	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
SHJG_2681	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
SHJG_2692	PWY-6123	inosine-5'-phosphate biosynthesis I
SHJG_2692	PWY-6124	inosine-5'-phosphate biosynthesis II
SHJG_2692	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SHJG_2692	PWY-7234	inosine-5'-phosphate biosynthesis III
SHJG_2772	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
SHJG_2772	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SHJG_2805	PWY-6749	CMP-legionaminate biosynthesis I
SHJG_2806	PWY-5269	cardiolipin biosynthesis II
SHJG_2806	PWY-5668	cardiolipin biosynthesis I
SHJG_2816	PWY-4261	glycerol degradation I
SHJG_2830	PWY-3661	glycine betaine degradation I
SHJG_2830	PWY-4722	creatinine degradation II
SHJG_2863	PWY-6902	chitin degradation II
SHJG_2876	PWY-6167	flavin biosynthesis II (archaea)
SHJG_2876	PWY-6168	flavin biosynthesis III (fungi)
SHJG_2877	PWY-6167	flavin biosynthesis II (archaea)
SHJG_2877	PWY-6168	flavin biosynthesis III (fungi)
SHJG_2877	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
SHJG_2879	PWY-6167	flavin biosynthesis II (archaea)
SHJG_2879	PWY-6168	flavin biosynthesis III (fungi)
SHJG_2879	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SHJG_2884	PWY-6986	alginate degradation
SHJG_2892	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
SHJG_2892	PWY-6596	adenosine nucleotides degradation I
SHJG_2892	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
SHJG_2896	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SHJG_2896	PWY-5723	Rubisco shunt
SHJG_2901	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
SHJG_2901	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
SHJG_2904	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
SHJG_2906	PWY-5686	UMP biosynthesis
SHJG_2907	PWY-5686	UMP biosynthesis
SHJG_2908	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SHJG_2908	PWY-5686	UMP biosynthesis
SHJG_2908	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SHJG_2909	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SHJG_2909	PWY-5686	UMP biosynthesis
SHJG_2909	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SHJG_2911	PWY-5686	UMP biosynthesis
SHJG_2912	PWY-5686	UMP biosynthesis
SHJG_2913	PWY-7183	pyrimidine nucleobases salvage I
SHJG_2919	PWY-6164	3-dehydroquinate biosynthesis I
SHJG_2920	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SHJG_2921	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SHJG_2922	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SHJG_2938	PWY-6605	adenine and adenosine salvage II
SHJG_2938	PWY-6610	adenine and adenosine salvage IV
SHJG_2946	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
SHJG_2947	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
SHJG_2968	PWY-5958	acridone alkaloid biosynthesis
SHJG_2968	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
SHJG_2968	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
SHJG_2974	PWY-5194	siroheme biosynthesis
SHJG_2974	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SHJG_2975	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
SHJG_2975	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
SHJG_2975	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
SHJG_2975	PWY-6269	adenosylcobalamin salvage from cobinamide II
SHJG_2994	PWY-4983	L-citrulline-nitric oxide cycle
SHJG_2994	PWY-4984	urea cycle
SHJG_2994	PWY-5	canavanine biosynthesis
SHJG_2994	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SHJG_2994	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SHJG_2995	PWY-4983	L-citrulline-nitric oxide cycle
SHJG_2995	PWY-4984	urea cycle
SHJG_2995	PWY-5	canavanine biosynthesis
SHJG_2995	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SHJG_2995	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SHJG_2997	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
SHJG_2997	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SHJG_3010	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SHJG_3010	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SHJG_3011	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SHJG_3012	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SHJG_3012	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SHJG_3018	PWY-6823	molybdenum cofactor biosynthesis
SHJG_3018	PWY-6891	thiazole biosynthesis II (Bacillus)
SHJG_3018	PWY-6892	thiazole biosynthesis I (E. coli)
SHJG_3018	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
SHJG_3027	PWY-1361	benzoyl-CoA degradation I (aerobic)
SHJG_3027	PWY-5109	2-methylbutanoate biosynthesis
SHJG_3027	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
SHJG_3027	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
SHJG_3027	PWY-5177	glutaryl-CoA degradation
SHJG_3027	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SHJG_3027	PWY-6435	4-hydroxybenzoate biosynthesis V
SHJG_3027	PWY-6583	pyruvate fermentation to butanol I
SHJG_3027	PWY-6863	pyruvate fermentation to hexanol
SHJG_3027	PWY-6883	pyruvate fermentation to butanol II
SHJG_3027	PWY-6944	androstenedione degradation
SHJG_3027	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
SHJG_3027	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
SHJG_3027	PWY-7007	methyl ketone biosynthesis
SHJG_3027	PWY-7046	4-coumarate degradation (anaerobic)
SHJG_3027	PWY-7094	fatty acid salvage
SHJG_3027	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
SHJG_3027	PWY-735	jasmonic acid biosynthesis
SHJG_3027	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
SHJG_3046	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SHJG_3049	PWY-381	nitrate reduction II (assimilatory)
SHJG_3049	PWY-5675	nitrate reduction V (assimilatory)
SHJG_3049	PWY-6549	L-glutamine biosynthesis III
SHJG_3049	PWY-6963	ammonia assimilation cycle I
SHJG_3049	PWY-6964	ammonia assimilation cycle II
SHJG_3088	PWY-6829	tRNA methylation (yeast)
SHJG_3096	PWY-2201	folate transformations I
SHJG_3096	PWY-3841	folate transformations II
SHJG_3099	PWY-4261	glycerol degradation I
SHJG_3100	PWY-4261	glycerol degradation I
SHJG_3100	PWY-6118	glycerol-3-phosphate shuttle
SHJG_3100	PWY-6952	glycerophosphodiester degradation
SHJG_3123	PWY-5530	sorbitol biosynthesis II
SHJG_3123	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SHJG_3185	PWY-6857	retinol biosynthesis
SHJG_3209	PWY-7205	CMP phosphorylation
SHJG_3211	PWY-3461	L-tyrosine biosynthesis II
SHJG_3211	PWY-3462	L-phenylalanine biosynthesis II
SHJG_3211	PWY-6120	L-tyrosine biosynthesis III
SHJG_3211	PWY-6627	salinosporamide A biosynthesis
SHJG_3223	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
SHJG_3223	PWY-7177	UTP and CTP dephosphorylation II
SHJG_3223	PWY-7185	UTP and CTP dephosphorylation I
SHJG_3226	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHJG_3226	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHJG_3231	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
SHJG_3231	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
SHJG_3231	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
SHJG_3255	PWY-6700	queuosine biosynthesis
SHJG_3265	PWY-5971	palmitate biosynthesis II (bacteria and plants)
SHJG_3265	PWY-5973	<i>cis</i>-vaccenate biosynthesis
SHJG_3265	PWY-5989	stearate biosynthesis II (bacteria and plants)
SHJG_3265	PWY-6113	superpathway of mycolate biosynthesis
SHJG_3265	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
SHJG_3265	PWY-6519	8-amino-7-oxononanoate biosynthesis I
SHJG_3265	PWY-7096	triclosan resistance
SHJG_3265	PWYG-321	mycolate biosynthesis
SHJG_3266	PWY-5367	petroselinate biosynthesis
SHJG_3266	PWY-5971	palmitate biosynthesis II (bacteria and plants)
SHJG_3266	PWY-5973	<i>cis</i>-vaccenate biosynthesis
SHJG_3266	PWY-5989	stearate biosynthesis II (bacteria and plants)
SHJG_3266	PWY-5994	palmitate biosynthesis I (animals and fungi)
SHJG_3266	PWY-6113	superpathway of mycolate biosynthesis
SHJG_3266	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
SHJG_3266	PWY-6519	8-amino-7-oxononanoate biosynthesis I
SHJG_3266	PWY-6951	SHJG_3266
SHJG_3266	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
SHJG_3266	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SHJG_3266	PWYG-321	mycolate biosynthesis
SHJG_3273	PWY-6823	molybdenum cofactor biosynthesis
SHJG_3309	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
SHJG_3309	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
SHJG_3309	PWY-6268	adenosylcobalamin salvage from cobalamin
SHJG_3309	PWY-6269	adenosylcobalamin salvage from cobinamide II
SHJG_3314	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SHJG_3315	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SHJG_3317	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SHJG_3324	PWY-6832	2-aminoethylphosphonate degradation II
SHJG_3326	PWY-6409	pyoverdine I biosynthesis
SHJG_3326	PWY-6562	norspermidine biosynthesis
SHJG_3326	PWY-761	rhizobactin 1021 biosynthesis
SHJG_3346	PWY-6497	D-galactarate degradation II
SHJG_3346	PWY-6499	D-glucarate degradation II
SHJG_3363	PWY-2941	L-lysine biosynthesis II
SHJG_3363	PWY-2942	L-lysine biosynthesis III
SHJG_3363	PWY-5097	L-lysine biosynthesis VI
SHJG_3369	PWY-6823	molybdenum cofactor biosynthesis
SHJG_3369	PWY-6891	thiazole biosynthesis II (Bacillus)
SHJG_3369	PWY-6892	thiazole biosynthesis I (E. coli)
SHJG_3369	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
SHJG_3383	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SHJG_3383	PWY-5723	Rubisco shunt
SHJG_3383	PWY-6891	thiazole biosynthesis II (Bacillus)
SHJG_3383	PWY-6892	thiazole biosynthesis I (E. coli)
SHJG_3383	PWY-6901	superpathway of glucose and xylose degradation
SHJG_3383	PWY-7560	methylerythritol phosphate pathway II
SHJG_3384	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SHJG_3384	PWY-5723	Rubisco shunt
SHJG_3385	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
SHJG_3387	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
SHJG_3387	PWY-6855	chitin degradation I (archaea)
SHJG_3387	PWY-6906	chitin derivatives degradation
SHJG_3397	PWY-3801	sucrose degradation II (sucrose synthase)
SHJG_3397	PWY-5054	sorbitol biosynthesis I
SHJG_3397	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
SHJG_3397	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
SHJG_3397	PWY-5659	GDP-mannose biosynthesis
SHJG_3397	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SHJG_3397	PWY-621	sucrose degradation III (sucrose invertase)
SHJG_3397	PWY-622	starch biosynthesis
SHJG_3397	PWY-6531	mannitol cycle
SHJG_3397	PWY-6981	chitin biosynthesis
SHJG_3397	PWY-7238	sucrose biosynthesis II
SHJG_3397	PWY-7347	sucrose biosynthesis III
SHJG_3397	PWY-7385	1,3-propanediol biosynthesis (engineered)
SHJG_3401	PWY-1042	glycolysis IV (plant cytosol)
SHJG_3401	PWY-5484	glycolysis II (from fructose 6-phosphate)
SHJG_3401	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SHJG_3401	PWY-7003	glycerol degradation to butanol
SHJG_3402	PWY-1042	glycolysis IV (plant cytosol)
SHJG_3402	PWY-5484	glycolysis II (from fructose 6-phosphate)
SHJG_3402	PWY-6886	1-butanol autotrophic biosynthesis
SHJG_3402	PWY-6901	superpathway of glucose and xylose degradation
SHJG_3402	PWY-7003	glycerol degradation to butanol
SHJG_3403	PWY-1042	glycolysis IV (plant cytosol)
SHJG_3403	PWY-5484	glycolysis II (from fructose 6-phosphate)
SHJG_3403	PWY-6901	superpathway of glucose and xylose degradation
SHJG_3403	PWY-7003	glycerol degradation to butanol
SHJG_3420	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SHJG_3420	PWY-6416	quinate degradation II
SHJG_3420	PWY-6707	gallate biosynthesis
SHJG_3431	PWY-6019	pseudouridine degradation
SHJG_3455	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHJG_3455	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHJG_3488	PWY-1042	glycolysis IV (plant cytosol)
SHJG_3488	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
SHJG_3488	PWY-5484	glycolysis II (from fructose 6-phosphate)
SHJG_3488	PWY-5723	Rubisco shunt
SHJG_3488	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SHJG_3488	PWY-6886	1-butanol autotrophic biosynthesis
SHJG_3488	PWY-6901	superpathway of glucose and xylose degradation
SHJG_3488	PWY-7003	glycerol degradation to butanol
SHJG_3488	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
SHJG_3488	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SHJG_3492	PWY-4061	glutathione-mediated detoxification I
SHJG_3492	PWY-6842	glutathione-mediated detoxification II
SHJG_3492	PWY-7112	4-hydroxy-2-nonenal detoxification
SHJG_3493	PWY-3461	L-tyrosine biosynthesis II
SHJG_3493	PWY-3462	L-phenylalanine biosynthesis II
SHJG_3493	PWY-6120	L-tyrosine biosynthesis III
SHJG_3493	PWY-6627	salinosporamide A biosynthesis
SHJG_3495	PWY-6807	xyloglucan degradation II (exoglucanase)
SHJG_3519	PWY-5958	acridone alkaloid biosynthesis
SHJG_3519	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
SHJG_3519	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
SHJG_3560	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SHJG_3564	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SHJG_3564	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
SHJG_3564	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
SHJG_3564	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SHJG_3566	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHJG_3566	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHJG_3567	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SHJG_3567	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
SHJG_3567	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SHJG_3568	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHJG_3568	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHJG_3573	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
SHJG_3573	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SHJG_3573	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SHJG_3573	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
SHJG_3586	PWY-2201	folate transformations I
SHJG_3586	PWY-3841	folate transformations II
SHJG_3587	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
SHJG_3587	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
SHJG_3587	PWY-6897	thiamin salvage II
SHJG_3587	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
SHJG_3587	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
SHJG_3587	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
SHJG_3587	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
SHJG_3593	PWY-6891	thiazole biosynthesis II (Bacillus)
SHJG_3593	PWY-6892	thiazole biosynthesis I (E. coli)
SHJG_3600	PWY-6164	3-dehydroquinate biosynthesis I
SHJG_3602	PWY-1042	glycolysis IV (plant cytosol)
SHJG_3602	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SHJG_3602	PWY-5484	glycolysis II (from fructose 6-phosphate)
SHJG_3602	PWY-7385	1,3-propanediol biosynthesis (engineered)
SHJG_3609	PWY-2723	trehalose degradation V
SHJG_3609	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
SHJG_3609	PWY-5661	GDP-glucose biosynthesis
SHJG_3609	PWY-7238	sucrose biosynthesis II
SHJG_3609	PWY-7385	1,3-propanediol biosynthesis (engineered)
SHJG_3634	PWY-3781	aerobic respiration I (cytochrome c)
SHJG_3634	PWY-4521	arsenite oxidation I (respiratory)
SHJG_3634	PWY-6692	Fe(II) oxidation
SHJG_3634	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SHJG_3635	PWY-3781	aerobic respiration I (cytochrome c)
SHJG_3635	PWY-4521	arsenite oxidation I (respiratory)
SHJG_3635	PWY-6692	Fe(II) oxidation
SHJG_3635	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SHJG_3642	PWY-5316	nicotine biosynthesis
SHJG_3642	PWY-7342	superpathway of nicotine biosynthesis
SHJG_3652	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
SHJG_3652	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
SHJG_3652	PWY-6269	adenosylcobalamin salvage from cobinamide II
SHJG_3653	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
SHJG_3653	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
SHJG_3653	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
SHJG_3653	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
SHJG_3653	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
SHJG_3653	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
SHJG_3653	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
SHJG_3653	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
SHJG_3653	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
SHJG_3653	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
SHJG_3654	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
SHJG_3654	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
SHJG_3654	PWY-6269	adenosylcobalamin salvage from cobinamide II
SHJG_3657	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
SHJG_3657	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
SHJG_3657	PWY-6269	adenosylcobalamin salvage from cobinamide II
SHJG_3658	PWY-5988	wound-induced proteolysis I
SHJG_3658	PWY-6018	seed germination protein turnover
SHJG_3659	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
SHJG_3659	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
SHJG_3662	PWY-6891	thiazole biosynthesis II (Bacillus)
SHJG_3662	PWY-6892	thiazole biosynthesis I (E. coli)
SHJG_3662	PWY-7560	methylerythritol phosphate pathway II
SHJG_3672	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
SHJG_3672	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
SHJG_3673	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
SHJG_3673	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
SHJG_3673	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
SHJG_3687	PWY-381	nitrate reduction II (assimilatory)
SHJG_3687	PWY-5675	nitrate reduction V (assimilatory)
SHJG_3687	PWY-6549	L-glutamine biosynthesis III
SHJG_3687	PWY-6963	ammonia assimilation cycle I
SHJG_3687	PWY-6964	ammonia assimilation cycle II
SHJG_3702	PWY-381	nitrate reduction II (assimilatory)
SHJG_3702	PWY-5675	nitrate reduction V (assimilatory)
SHJG_3702	PWY-6549	L-glutamine biosynthesis III
SHJG_3702	PWY-6963	ammonia assimilation cycle I
SHJG_3702	PWY-6964	ammonia assimilation cycle II
SHJG_3717	PWY-842	starch degradation I
SHJG_3730	PWY-381	nitrate reduction II (assimilatory)
SHJG_3730	PWY-5675	nitrate reduction V (assimilatory)
SHJG_3730	PWY-6549	L-glutamine biosynthesis III
SHJG_3730	PWY-6963	ammonia assimilation cycle I
SHJG_3730	PWY-6964	ammonia assimilation cycle II
SHJG_3745	PWY-6654	phosphopantothenate biosynthesis III
SHJG_3780	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SHJG_3780	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SHJG_3780	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SHJG_3780	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SHJG_3780	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHJG_3780	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHJG_3780	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
SHJG_3780	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
SHJG_3781	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SHJG_3781	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SHJG_3781	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SHJG_3781	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SHJG_3781	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHJG_3781	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHJG_3781	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
SHJG_3781	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
SHJG_3788	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
SHJG_3788	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
SHJG_3788	PWY-7242	D-fructuronate degradation
SHJG_3788	PWY-7310	D-glucosaminate degradation
SHJG_3791	PWY-5663	tetrahydrobiopterin biosynthesis I
SHJG_3791	PWY-5664	tetrahydrobiopterin biosynthesis II
SHJG_3791	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
SHJG_3791	PWY-6703	preQ<sub>0</sub> biosynthesis
SHJG_3791	PWY-6983	tetrahydrobiopterin biosynthesis III
SHJG_3791	PWY-7442	drosopterin and aurodrosopterin biosynthesis
SHJG_3826	PWY-6857	retinol biosynthesis
SHJG_3846	PWY-6654	phosphopantothenate biosynthesis III
SHJG_3864	PWY-6891	thiazole biosynthesis II (Bacillus)
SHJG_3864	PWY-6892	thiazole biosynthesis I (E. coli)
SHJG_3864	PWY-7560	methylerythritol phosphate pathway II
SHJG_3877	PWY-4381	fatty acid biosynthesis initiation I
SHJG_3883	PWY-2723	trehalose degradation V
SHJG_3883	PWY-6317	galactose degradation I (Leloir pathway)
SHJG_3883	PWY-6737	starch degradation V
SHJG_3898	PWY-2723	trehalose degradation V
SHJG_3898	PWY-6317	galactose degradation I (Leloir pathway)
SHJG_3898	PWY-6737	starch degradation V
SHJG_3904	PWY-6807	xyloglucan degradation II (exoglucanase)
SHJG_3916	PWY-4381	fatty acid biosynthesis initiation I
SHJG_3916	PWY-5743	3-hydroxypropanoate cycle
SHJG_3916	PWY-5744	glyoxylate assimilation
SHJG_3916	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SHJG_3916	PWY-6679	jadomycin biosynthesis
SHJG_3916	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SHJG_3939	PWY-4261	glycerol degradation I
SHJG_3947	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SHJG_3950	PWY-7153	grixazone biosynthesis
SHJG_3958	PWY-6683	sulfate reduction III (assimilatory)
SHJG_3968	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
SHJG_3968	PWY-6549	L-glutamine biosynthesis III
SHJG_3968	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SHJG_3968	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
SHJG_3971	PWY-5941	glycogen degradation II (eukaryotic)
SHJG_3971	PWY-6724	starch degradation II
SHJG_3971	PWY-6737	starch degradation V
SHJG_3971	PWY-7238	sucrose biosynthesis II
SHJG_3978	PWY-6902	chitin degradation II
SHJG_3989	PWY-6012	acyl carrier protein metabolism I
SHJG_3989	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
SHJG_4012	PWY-2941	L-lysine biosynthesis II
SHJG_4012	PWY-2942	L-lysine biosynthesis III
SHJG_4012	PWY-5097	L-lysine biosynthesis VI
SHJG_4016	PWY-6871	3-methylbutanol biosynthesis
SHJG_4020	PWY-3121	linamarin degradation
SHJG_4020	PWY-5176	coumarin biosynthesis (via 2-coumarate)
SHJG_4020	PWY-6002	lotaustralin degradation
SHJG_4020	PWY-6788	cellulose degradation II (fungi)
SHJG_4020	PWY-7089	taxiphyllin bioactivation
SHJG_4020	PWY-7091	linustatin bioactivation
SHJG_4020	PWY-7092	neolinustatin bioactivation
SHJG_4035	PWY-6610	adenine and adenosine salvage IV
SHJG_4043	PWY-723	alkylnitronates degradation
SHJG_4059	PWY-7153	grixazone biosynthesis
SHJG_4074	PWY-5381	pyridine nucleotide cycling (plants)
SHJG_4074	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
SHJG_4084	PWY-3821	galactose degradation III
SHJG_4084	PWY-6317	galactose degradation I (Leloir pathway)
SHJG_4084	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
SHJG_4084	PWY-6527	stachyose degradation
SHJG_4084	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
SHJG_4084	PWY-7344	UDP-D-galactose biosynthesis
SHJG_4091	PWY-6349	CDP-archaeol biosynthesis
SHJG_4104	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SHJG_4104	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
SHJG_4104	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SHJG_4104	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHJG_4104	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
SHJG_4104	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SHJG_4104	PWY-7205	CMP phosphorylation
SHJG_4104	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SHJG_4104	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHJG_4104	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
SHJG_4104	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHJG_4104	PWY-7224	purine deoxyribonucleosides salvage
SHJG_4104	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
SHJG_4104	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
SHJG_4106	PWY-2161	folate polyglutamylation
SHJG_4121	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SHJG_4121	PWY-5723	Rubisco shunt
SHJG_4126	PWY-6854	ethylene biosynthesis III (microbes)
SHJG_4128	PWY-4061	glutathione-mediated detoxification I
SHJG_4128	PWY-6842	glutathione-mediated detoxification II
SHJG_4128	PWY-7112	4-hydroxy-2-nonenal detoxification
SHJG_4135	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
SHJG_4135	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SHJG_4136	PWY-5386	methylglyoxal degradation I
SHJG_4142	PWY-2941	L-lysine biosynthesis II
SHJG_4142	PWY-2942	L-lysine biosynthesis III
SHJG_4142	PWY-5097	L-lysine biosynthesis VI
SHJG_4142	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SHJG_4142	PWY-6559	spermidine biosynthesis II
SHJG_4142	PWY-6562	norspermidine biosynthesis
SHJG_4142	PWY-7153	grixazone biosynthesis
SHJG_4142	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SHJG_4144	PWY-4061	glutathione-mediated detoxification I
SHJG_4144	PWY-6842	glutathione-mediated detoxification II
SHJG_4144	PWY-7112	4-hydroxy-2-nonenal detoxification
SHJG_4150	PWY-5941	glycogen degradation II (eukaryotic)
SHJG_4150	PWY-6724	starch degradation II
SHJG_4150	PWY-6737	starch degradation V
SHJG_4150	PWY-7238	sucrose biosynthesis II
SHJG_4216	PWY-7456	mannan degradation
SHJG_4228	PWY-5642	2,4-dinitrotoluene degradation
SHJG_4228	PWY-6373	acrylate degradation
SHJG_4230	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
SHJG_4269	PWY-40	putrescine biosynthesis I
SHJG_4269	PWY-6305	putrescine biosynthesis IV
SHJG_4277	PWY-4381	fatty acid biosynthesis initiation I
SHJG_4277	PWY-5743	3-hydroxypropanoate cycle
SHJG_4277	PWY-5744	glyoxylate assimilation
SHJG_4277	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SHJG_4277	PWY-6679	jadomycin biosynthesis
SHJG_4277	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SHJG_4288	PWY-6902	chitin degradation II
SHJG_4292	PWY-6749	CMP-legionaminate biosynthesis I
SHJG_4298	PWY-3121	linamarin degradation
SHJG_4298	PWY-5176	coumarin biosynthesis (via 2-coumarate)
SHJG_4298	PWY-6002	lotaustralin degradation
SHJG_4298	PWY-6788	cellulose degradation II (fungi)
SHJG_4298	PWY-7089	taxiphyllin bioactivation
SHJG_4298	PWY-7091	linustatin bioactivation
SHJG_4298	PWY-7092	neolinustatin bioactivation
SHJG_4303	PWY-3121	linamarin degradation
SHJG_4303	PWY-5176	coumarin biosynthesis (via 2-coumarate)
SHJG_4303	PWY-6002	lotaustralin degradation
SHJG_4303	PWY-6788	cellulose degradation II (fungi)
SHJG_4303	PWY-7089	taxiphyllin bioactivation
SHJG_4303	PWY-7091	linustatin bioactivation
SHJG_4303	PWY-7092	neolinustatin bioactivation
SHJG_4321	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHJG_4321	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHJG_4367	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
SHJG_4380	PWY-7310	D-glucosaminate degradation
SHJG_4381	PWY-7310	D-glucosaminate degradation
SHJG_4382	PWY-7310	D-glucosaminate degradation
SHJG_4386	PWY-6936	seleno-amino acid biosynthesis
SHJG_4394	PWY-5381	pyridine nucleotide cycling (plants)
SHJG_4403	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHJG_4403	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHJG_4419	PWY-6902	chitin degradation II
SHJG_4422	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHJG_4422	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHJG_4430	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SHJG_4430	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
SHJG_4463	PWY-5022	4-aminobutanoate degradation V
SHJG_4463	PWY-6728	methylaspartate cycle
SHJG_4463	PWY-7126	ethylene biosynthesis IV
SHJG_4479	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
SHJG_4479	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
SHJG_4488	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
SHJG_4492	PWY-3861	mannitol degradation II
SHJG_4492	PWY-3881	mannitol biosynthesis
SHJG_4492	PWY-5659	GDP-mannose biosynthesis
SHJG_4492	PWY-7456	mannan degradation
SHJG_4492	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
SHJG_4493	PWY-3801	sucrose degradation II (sucrose synthase)
SHJG_4493	PWY-3861	mannitol degradation II
SHJG_4493	PWY-3881	mannitol biosynthesis
SHJG_4493	PWY-5054	sorbitol biosynthesis I
SHJG_4493	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
SHJG_4493	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
SHJG_4493	PWY-5659	GDP-mannose biosynthesis
SHJG_4493	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SHJG_4493	PWY-621	sucrose degradation III (sucrose invertase)
SHJG_4493	PWY-622	starch biosynthesis
SHJG_4493	PWY-6531	mannitol cycle
SHJG_4493	PWY-6981	chitin biosynthesis
SHJG_4493	PWY-7238	sucrose biosynthesis II
SHJG_4493	PWY-7347	sucrose biosynthesis III
SHJG_4493	PWY-7385	1,3-propanediol biosynthesis (engineered)
SHJG_4493	PWY-7456	mannan degradation
SHJG_4493	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
SHJG_4495	PWY-6749	CMP-legionaminate biosynthesis I
SHJG_4502	PWY-5331	taurine biosynthesis
SHJG_4503	PWY-5198	factor 420 biosynthesis
SHJG_4504	PWY-5199	factor 420 polyglutamylation
SHJG_4519	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
SHJG_4523	PWY-7533	gliotoxin biosynthesis
SHJG_4524	PWY-6123	inosine-5'-phosphate biosynthesis I
SHJG_4524	PWY-7234	inosine-5'-phosphate biosynthesis III
SHJG_4535	PWY-5028	L-histidine degradation II
SHJG_4535	PWY-5030	L-histidine degradation III
SHJG_4538	PWY-5028	L-histidine degradation II
SHJG_4538	PWY-5030	L-histidine degradation III
SHJG_4550	PWY-801	L-homocysteine and L-cysteine interconversion
SHJG_4565	PWY-1042	glycolysis IV (plant cytosol)
SHJG_4565	PWY-1622	formaldehyde assimilation I (serine pathway)
SHJG_4565	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
SHJG_4565	PWY-5484	glycolysis II (from fructose 6-phosphate)
SHJG_4565	PWY-5723	Rubisco shunt
SHJG_4565	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SHJG_4565	PWY-6886	1-butanol autotrophic biosynthesis
SHJG_4565	PWY-6901	superpathway of glucose and xylose degradation
SHJG_4565	PWY-7003	glycerol degradation to butanol
SHJG_4565	PWY-7124	ethylene biosynthesis V (engineered)
SHJG_4565	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
SHJG_4594	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
SHJG_4599	PWY-1622	formaldehyde assimilation I (serine pathway)
SHJG_4599	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
SHJG_4599	PWY-5913	TCA cycle VI (obligate autotrophs)
SHJG_4599	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SHJG_4599	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
SHJG_4599	PWY-6549	L-glutamine biosynthesis III
SHJG_4599	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SHJG_4599	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
SHJG_4599	PWY-7124	ethylene biosynthesis V (engineered)
SHJG_4609	PWY-3821	galactose degradation III
SHJG_4609	PWY-6317	galactose degradation I (Leloir pathway)
SHJG_4609	PWY-6527	stachyose degradation
SHJG_4610	PWY-3821	galactose degradation III
SHJG_4610	PWY-6317	galactose degradation I (Leloir pathway)
SHJG_4610	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
SHJG_4610	PWY-6527	stachyose degradation
SHJG_4610	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
SHJG_4610	PWY-7344	UDP-D-galactose biosynthesis
SHJG_4611	PWY-6317	galactose degradation I (Leloir pathway)
SHJG_4611	PWY-6527	stachyose degradation
SHJG_4619	PWY-7560	methylerythritol phosphate pathway II
SHJG_4651	PWY-6823	molybdenum cofactor biosynthesis
SHJG_4663	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SHJG_4667	PWY-7310	D-glucosaminate degradation
SHJG_4695	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHJG_4695	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHJG_4710	PWY-5198	factor 420 biosynthesis
SHJG_4730	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
SHJG_4730	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SHJG_4742	PWY-2201	folate transformations I
SHJG_4742	PWY-5497	purine nucleobases degradation II (anaerobic)
SHJG_4754	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
SHJG_4754	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SHJG_4762	PWY-4381	fatty acid biosynthesis initiation I
SHJG_4762	PWY-5743	3-hydroxypropanoate cycle
SHJG_4762	PWY-5744	glyoxylate assimilation
SHJG_4762	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SHJG_4762	PWY-6679	jadomycin biosynthesis
SHJG_4762	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SHJG_4764	PWY-7285	methylwyosine biosynthesis
SHJG_4764	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
SHJG_4771	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHJG_4771	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHJG_4799	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
SHJG_4832	PWY-6906	chitin derivatives degradation
SHJG_4832	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
SHJG_4832	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
SHJG_4857	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
SHJG_4857	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SHJG_4858	PWY-7560	methylerythritol phosphate pathway II
SHJG_4859	PWY-7560	methylerythritol phosphate pathway II
SHJG_4871	PWY-1622	formaldehyde assimilation I (serine pathway)
SHJG_4871	PWY-5484	glycolysis II (from fructose 6-phosphate)
SHJG_4909	PWY-5350	thiosulfate disproportionation III (rhodanese)
SHJG_4946	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHJG_4946	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHJG_4976	PWY-6168	flavin biosynthesis III (fungi)
SHJG_4976	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
SHJG_5010	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SHJG_5010	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SHJG_5010	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SHJG_5011	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SHJG_5011	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SHJG_5011	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SHJG_5011	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SHJG_5016	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SHJG_5016	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SHJG_5016	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SHJG_5017	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SHJG_5017	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SHJG_5017	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SHJG_5018	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SHJG_5018	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SHJG_5018	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SHJG_5021	PWY-6123	inosine-5'-phosphate biosynthesis I
SHJG_5021	PWY-6124	inosine-5'-phosphate biosynthesis II
SHJG_5021	PWY-7234	inosine-5'-phosphate biosynthesis III
SHJG_5025	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SHJG_5025	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SHJG_5025	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SHJG_5045	PWY-7183	pyrimidine nucleobases salvage I
SHJG_5057	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
SHJG_5057	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SHJG_5116	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
SHJG_5117	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
SHJG_5142	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
SHJG_5169	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SHJG_5173	PWY-2301	<i>myo</i>-inositol biosynthesis
SHJG_5173	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
SHJG_5173	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
SHJG_5173	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
SHJG_5173	PWY-6664	di-myo-inositol phosphate biosynthesis
SHJG_5215	PWY-5958	acridone alkaloid biosynthesis
SHJG_5215	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
SHJG_5215	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
SHJG_5240	PWY-1361	benzoyl-CoA degradation I (aerobic)
SHJG_5240	PWY-5109	2-methylbutanoate biosynthesis
SHJG_5240	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
SHJG_5240	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
SHJG_5240	PWY-5177	glutaryl-CoA degradation
SHJG_5240	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SHJG_5240	PWY-6435	4-hydroxybenzoate biosynthesis V
SHJG_5240	PWY-6583	pyruvate fermentation to butanol I
SHJG_5240	PWY-6863	pyruvate fermentation to hexanol
SHJG_5240	PWY-6883	pyruvate fermentation to butanol II
SHJG_5240	PWY-6944	androstenedione degradation
SHJG_5240	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
SHJG_5240	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
SHJG_5240	PWY-7007	methyl ketone biosynthesis
SHJG_5240	PWY-7046	4-coumarate degradation (anaerobic)
SHJG_5240	PWY-7094	fatty acid salvage
SHJG_5240	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
SHJG_5240	PWY-735	jasmonic acid biosynthesis
SHJG_5240	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
SHJG_5247	PWY-6823	molybdenum cofactor biosynthesis
SHJG_5310	PWY-3781	aerobic respiration I (cytochrome c)
SHJG_5310	PWY-4521	arsenite oxidation I (respiratory)
SHJG_5310	PWY-6692	Fe(II) oxidation
SHJG_5310	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SHJG_5359	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHJG_5368	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SHJG_5368	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
SHJG_5368	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SHJG_5377	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
SHJG_5377	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SHJG_5385	PWY-5686	UMP biosynthesis
SHJG_5386	PWY-1042	glycolysis IV (plant cytosol)
SHJG_5386	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SHJG_5386	PWY-5484	glycolysis II (from fructose 6-phosphate)
SHJG_5386	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SHJG_5386	PWY-7385	1,3-propanediol biosynthesis (engineered)
SHJG_5391	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
SHJG_5391	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
SHJG_5398	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SHJG_5410	PWY-2941	L-lysine biosynthesis II
SHJG_5410	PWY-2942	L-lysine biosynthesis III
SHJG_5410	PWY-5097	L-lysine biosynthesis VI
SHJG_5410	PWY-6559	spermidine biosynthesis II
SHJG_5410	PWY-6562	norspermidine biosynthesis
SHJG_5410	PWY-7153	grixazone biosynthesis
SHJG_5411	PWY-2941	L-lysine biosynthesis II
SHJG_5411	PWY-2942	L-lysine biosynthesis III
SHJG_5411	PWY-5097	L-lysine biosynthesis VI
SHJG_5411	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SHJG_5411	PWY-6559	spermidine biosynthesis II
SHJG_5411	PWY-6562	norspermidine biosynthesis
SHJG_5411	PWY-7153	grixazone biosynthesis
SHJG_5411	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SHJG_5421	PWY-5381	pyridine nucleotide cycling (plants)
SHJG_5421	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
SHJG_5448	PWY-6672	<i>cis</i>-genanyl-CoA degradation
SHJG_5448	PWY-7118	chitin degradation to ethanol
SHJG_5449	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
SHJG_5449	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SHJG_5449	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SHJG_5449	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
SHJG_5469	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SHJG_5469	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SHJG_5469	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHJG_5469	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
SHJG_5469	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SHJG_5469	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SHJG_5522	PWY-4321	L-glutamate degradation IV
SHJG_5529	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SHJG_5529	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SHJG_5532	PWY-6599	guanine and guanosine salvage II
SHJG_5532	PWY-6609	adenine and adenosine salvage III
SHJG_5532	PWY-6610	adenine and adenosine salvage IV
SHJG_5532	PWY-6620	guanine and guanosine salvage
SHJG_5534	PWY-5663	tetrahydrobiopterin biosynthesis I
SHJG_5534	PWY-5664	tetrahydrobiopterin biosynthesis II
SHJG_5534	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
SHJG_5534	PWY-6703	preQ<sub>0</sub> biosynthesis
SHJG_5534	PWY-6983	tetrahydrobiopterin biosynthesis III
SHJG_5534	PWY-7442	drosopterin and aurodrosopterin biosynthesis
SHJG_5536	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
SHJG_5536	PWY-6148	tetrahydromethanopterin biosynthesis
SHJG_5536	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
SHJG_5536	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
SHJG_5537	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
SHJG_5537	PWY-6148	tetrahydromethanopterin biosynthesis
SHJG_5537	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
SHJG_5537	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
SHJG_5539	PWY-6614	tetrahydrofolate biosynthesis
SHJG_5556	PWY-5316	nicotine biosynthesis
SHJG_5556	PWY-7342	superpathway of nicotine biosynthesis
SHJG_5557	PWY-5316	nicotine biosynthesis
SHJG_5557	PWY-5381	pyridine nucleotide cycling (plants)
SHJG_5557	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
SHJG_5557	PWY-7342	superpathway of nicotine biosynthesis
SHJG_5558	PWY-3961	phosphopantothenate biosynthesis II
SHJG_5583	PWY-5101	L-isoleucine biosynthesis II
SHJG_5583	PWY-5103	L-isoleucine biosynthesis III
SHJG_5583	PWY-5104	L-isoleucine biosynthesis IV
SHJG_5583	PWY-7111	pyruvate fermentation to isobutanol (engineered)
SHJG_5590	PWY-3341	L-proline biosynthesis III
SHJG_5590	PWY-4981	L-proline biosynthesis II (from arginine)
SHJG_5590	PWY-6344	L-ornithine degradation II (Stickland reaction)
SHJG_5605	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SHJG_5606	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SHJG_5606	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
SHJG_5607	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SHJG_5607	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
SHJG_5607	PWY-5194	siroheme biosynthesis
SHJG_5607	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SHJG_5609	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SHJG_5609	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
SHJG_5619	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SHJG_5659	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SHJG_5673	PWY-5198	factor 420 biosynthesis
SHJG_5673	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
SHJG_5673	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
SHJG_5690	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
SHJG_5690	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
SHJG_5692	PWY-5198	factor 420 biosynthesis
SHJG_5698	PWY-5839	menaquinol-7 biosynthesis
SHJG_5698	PWY-5844	menaquinol-9 biosynthesis
SHJG_5698	PWY-5849	menaquinol-6 biosynthesis
SHJG_5698	PWY-5890	menaquinol-10 biosynthesis
SHJG_5698	PWY-5891	menaquinol-11 biosynthesis
SHJG_5698	PWY-5892	menaquinol-12 biosynthesis
SHJG_5698	PWY-5895	menaquinol-13 biosynthesis
SHJG_5769	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHJG_5769	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHJG_5818	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SHJG_5828	PWY-7456	mannan degradation
SHJG_5830	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
SHJG_5835	PWY-6749	CMP-legionaminate biosynthesis I
SHJG_5837	PWY-3961	phosphopantothenate biosynthesis II
SHJG_5838	PWY-6749	CMP-legionaminate biosynthesis I
SHJG_5840	PWY-6012	acyl carrier protein metabolism I
SHJG_5840	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
SHJG_5841	PWY-6938	NADH repair
SHJG_5842	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SHJG_5867	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
SHJG_5867	PWY-6596	adenosine nucleotides degradation I
SHJG_5867	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
SHJG_5870	PWY-4261	glycerol degradation I
SHJG_5870	PWY-6118	glycerol-3-phosphate shuttle
SHJG_5870	PWY-6952	glycerophosphodiester degradation
SHJG_5881	PWY-3461	L-tyrosine biosynthesis II
SHJG_5881	PWY-3462	L-phenylalanine biosynthesis II
SHJG_5881	PWY-6120	L-tyrosine biosynthesis III
SHJG_5881	PWY-6627	salinosporamide A biosynthesis
SHJG_5882	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
SHJG_5910	PWY-5392	reductive TCA cycle II
SHJG_5910	PWY-5537	pyruvate fermentation to acetate V
SHJG_5910	PWY-5538	pyruvate fermentation to acetate VI
SHJG_5910	PWY-5690	TCA cycle II (plants and fungi)
SHJG_5910	PWY-5913	TCA cycle VI (obligate autotrophs)
SHJG_5910	PWY-6728	methylaspartate cycle
SHJG_5910	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHJG_5910	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SHJG_5911	PWY-5392	reductive TCA cycle II
SHJG_5911	PWY-5537	pyruvate fermentation to acetate V
SHJG_5911	PWY-5538	pyruvate fermentation to acetate VI
SHJG_5911	PWY-5690	TCA cycle II (plants and fungi)
SHJG_5911	PWY-5913	TCA cycle VI (obligate autotrophs)
SHJG_5911	PWY-6728	methylaspartate cycle
SHJG_5911	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHJG_5911	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SHJG_5915	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SHJG_5915	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
SHJG_5916	PWY-6123	inosine-5'-phosphate biosynthesis I
SHJG_5916	PWY-6124	inosine-5'-phosphate biosynthesis II
SHJG_5916	PWY-7234	inosine-5'-phosphate biosynthesis III
SHJG_5917	PWY-4381	fatty acid biosynthesis initiation I
SHJG_5919	PWY-2941	L-lysine biosynthesis II
SHJG_5919	PWY-2942	L-lysine biosynthesis III
SHJG_5919	PWY-5097	L-lysine biosynthesis VI
SHJG_5924	PWY-6012	acyl carrier protein metabolism I
SHJG_5924	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
SHJG_5945	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
SHJG_5945	PWY-2201	folate transformations I
SHJG_5945	PWY-3841	folate transformations II
SHJG_5945	PWY-5030	L-histidine degradation III
SHJG_5945	PWY-5497	purine nucleobases degradation II (anaerobic)
SHJG_5945	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
SHJG_5950	PWY-1622	formaldehyde assimilation I (serine pathway)
SHJG_5950	PWY-5392	reductive TCA cycle II
SHJG_5950	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SHJG_5950	PWY-5690	TCA cycle II (plants and fungi)
SHJG_5950	PWY-5913	TCA cycle VI (obligate autotrophs)
SHJG_5950	PWY-6728	methylaspartate cycle
SHJG_5950	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHJG_5950	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SHJG_5950	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SHJG_5965	PWY-3341	L-proline biosynthesis III
SHJG_5965	PWY-4981	L-proline biosynthesis II (from arginine)
SHJG_5965	PWY-6344	L-ornithine degradation II (Stickland reaction)
SHJG_5965	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
SHJG_5966	PWY-1622	formaldehyde assimilation I (serine pathway)
SHJG_5966	PWY-181	photorespiration
SHJG_5966	PWY-2161	folate polyglutamylation
SHJG_5966	PWY-2201	folate transformations I
SHJG_5966	PWY-3661	glycine betaine degradation I
SHJG_5966	PWY-3661-1	glycine betaine degradation II (mammalian)
SHJG_5966	PWY-3841	folate transformations II
SHJG_5966	PWY-5497	purine nucleobases degradation II (anaerobic)
SHJG_5977	PWY-3781	aerobic respiration I (cytochrome c)
SHJG_5977	PWY-4302	aerobic respiration III (alternative oxidase pathway)
SHJG_5977	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SHJG_5977	PWY-5690	TCA cycle II (plants and fungi)
SHJG_5977	PWY-6728	methylaspartate cycle
SHJG_5977	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHJG_5977	PWY-7254	TCA cycle VII (acetate-producers)
SHJG_5977	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SHJG_5978	PWY-3781	aerobic respiration I (cytochrome c)
SHJG_5978	PWY-4302	aerobic respiration III (alternative oxidase pathway)
SHJG_5978	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SHJG_5978	PWY-5690	TCA cycle II (plants and fungi)
SHJG_5978	PWY-6728	methylaspartate cycle
SHJG_5978	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHJG_5978	PWY-7254	TCA cycle VII (acetate-producers)
SHJG_5978	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SHJG_5981	PWY-5691	urate degradation to allantoin I
SHJG_5981	PWY-7394	urate degradation to allantoin II
SHJG_5983	PWY-6902	chitin degradation II
SHJG_5992	PWY-5743	3-hydroxypropanoate cycle
SHJG_5992	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SHJG_5992	PWY-6728	methylaspartate cycle
SHJG_5992	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SHJG_5998	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
SHJG_5998	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
SHJG_6009	PWY-7181	pyrimidine deoxyribonucleosides degradation
SHJG_6015	PWY-6609	adenine and adenosine salvage III
SHJG_6015	PWY-6611	adenine and adenosine salvage V
SHJG_6015	PWY-7179	purine deoxyribonucleosides degradation I
SHJG_6015	PWY-7179-1	purine deoxyribonucleosides degradation
SHJG_6027	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
SHJG_6030	PWY-6749	CMP-legionaminate biosynthesis I
SHJG_6031	PWY-4202	arsenate detoxification I (glutaredoxin)
SHJG_6031	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
SHJG_6031	PWY-6608	guanosine nucleotides degradation III
SHJG_6031	PWY-6609	adenine and adenosine salvage III
SHJG_6031	PWY-6611	adenine and adenosine salvage V
SHJG_6031	PWY-6620	guanine and guanosine salvage
SHJG_6031	PWY-6627	salinosporamide A biosynthesis
SHJG_6031	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
SHJG_6031	PWY-7179	purine deoxyribonucleosides degradation I
SHJG_6031	PWY-7179-1	purine deoxyribonucleosides degradation
SHJG_6032	PWY-4041	&gamma;-glutamyl cycle
SHJG_6040	PWY-4381	fatty acid biosynthesis initiation I
SHJG_6040	PWY-5743	3-hydroxypropanoate cycle
SHJG_6040	PWY-5744	glyoxylate assimilation
SHJG_6040	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SHJG_6040	PWY-6679	jadomycin biosynthesis
SHJG_6040	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SHJG_6041	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
SHJG_6041	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
SHJG_6046	PWY-5028	L-histidine degradation II
SHJG_6046	PWY-5030	L-histidine degradation III
SHJG_6080	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SHJG_6092	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SHJG_6104	PWY-6902	chitin degradation II
SHJG_6140	PWY-5392	reductive TCA cycle II
SHJG_6140	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SHJG_6140	PWY-5690	TCA cycle II (plants and fungi)
SHJG_6140	PWY-5913	TCA cycle VI (obligate autotrophs)
SHJG_6140	PWY-6728	methylaspartate cycle
SHJG_6140	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHJG_6140	PWY-7254	TCA cycle VII (acetate-producers)
SHJG_6140	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SHJG_6141	PWY-5392	reductive TCA cycle II
SHJG_6141	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SHJG_6141	PWY-5690	TCA cycle II (plants and fungi)
SHJG_6141	PWY-5913	TCA cycle VI (obligate autotrophs)
SHJG_6141	PWY-6728	methylaspartate cycle
SHJG_6141	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHJG_6141	PWY-7254	TCA cycle VII (acetate-producers)
SHJG_6141	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SHJG_6144	PWY-5484	glycolysis II (from fructose 6-phosphate)
SHJG_6150	PWY-7560	methylerythritol phosphate pathway II
SHJG_6155	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHJG_6155	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHJG_6157	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHJG_6157	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHJG_6158	PWY-2941	L-lysine biosynthesis II
SHJG_6158	PWY-5097	L-lysine biosynthesis VI
SHJG_6164	PWY-5199	factor 420 polyglutamylation
SHJG_6174	PWY-4981	L-proline biosynthesis II (from arginine)
SHJG_6176	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHJG_6176	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHJG_6202	PWY-3781	aerobic respiration I (cytochrome c)
SHJG_6202	PWY-4302	aerobic respiration III (alternative oxidase pathway)
SHJG_6202	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SHJG_6202	PWY-5690	TCA cycle II (plants and fungi)
SHJG_6202	PWY-6728	methylaspartate cycle
SHJG_6202	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHJG_6202	PWY-7254	TCA cycle VII (acetate-producers)
SHJG_6202	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SHJG_6241	PWY-6614	tetrahydrofolate biosynthesis
SHJG_6293	PWY-5381	pyridine nucleotide cycling (plants)
SHJG_6309	PWY-6823	molybdenum cofactor biosynthesis
SHJG_6316	PWY-5506	methanol oxidation to formaldehyde IV
SHJG_6324	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SHJG_6340	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SHJG_6340	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SHJG_6340	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SHJG_6340	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SHJG_6340	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHJG_6340	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHJG_6340	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
SHJG_6340	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
SHJG_6341	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SHJG_6341	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SHJG_6341	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SHJG_6341	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SHJG_6341	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHJG_6341	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHJG_6341	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
SHJG_6341	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
SHJG_6347	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
SHJG_6347	PWY-6855	chitin degradation I (archaea)
SHJG_6347	PWY-6906	chitin derivatives degradation
SHJG_6352	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
SHJG_6352	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
SHJG_6352	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
SHJG_6369	PWY-6854	ethylene biosynthesis III (microbes)
SHJG_6389	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
SHJG_6419	PWY-0	putrescine degradation III
SHJG_6419	PWY-6117	spermine and spermidine degradation I
SHJG_6434	PWY-2941	L-lysine biosynthesis II
SHJG_6434	PWY-2942	L-lysine biosynthesis III
SHJG_6434	PWY-5097	L-lysine biosynthesis VI
SHJG_6437	PWY-702	L-methionine biosynthesis II
SHJG_6438	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SHJG_6445	PWY-1622	formaldehyde assimilation I (serine pathway)
SHJG_6445	PWY-181	photorespiration
SHJG_6445	PWY-2161	folate polyglutamylation
SHJG_6445	PWY-2201	folate transformations I
SHJG_6445	PWY-3661	glycine betaine degradation I
SHJG_6445	PWY-3661-1	glycine betaine degradation II (mammalian)
SHJG_6445	PWY-3841	folate transformations II
SHJG_6445	PWY-5497	purine nucleobases degradation II (anaerobic)
SHJG_6446	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SHJG_6446	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
SHJG_6446	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SHJG_6452	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SHJG_6454	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SHJG_6457	PWY-6902	chitin degradation II
SHJG_6462	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
SHJG_6462	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
SHJG_6462	PWY-6268	adenosylcobalamin salvage from cobalamin
SHJG_6462	PWY-6269	adenosylcobalamin salvage from cobinamide II
SHJG_6463	PWY-1361	benzoyl-CoA degradation I (aerobic)
SHJG_6463	PWY-5109	2-methylbutanoate biosynthesis
SHJG_6463	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
SHJG_6463	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
SHJG_6463	PWY-5177	glutaryl-CoA degradation
SHJG_6463	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SHJG_6463	PWY-6435	4-hydroxybenzoate biosynthesis V
SHJG_6463	PWY-6583	pyruvate fermentation to butanol I
SHJG_6463	PWY-6863	pyruvate fermentation to hexanol
SHJG_6463	PWY-6883	pyruvate fermentation to butanol II
SHJG_6463	PWY-6944	androstenedione degradation
SHJG_6463	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
SHJG_6463	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
SHJG_6463	PWY-7007	methyl ketone biosynthesis
SHJG_6463	PWY-7046	4-coumarate degradation (anaerobic)
SHJG_6463	PWY-7094	fatty acid salvage
SHJG_6463	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
SHJG_6463	PWY-735	jasmonic acid biosynthesis
SHJG_6463	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
SHJG_6478	PWY-5743	3-hydroxypropanoate cycle
SHJG_6478	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SHJG_6478	PWY-6728	methylaspartate cycle
SHJG_6478	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SHJG_6493	PWY-5743	3-hydroxypropanoate cycle
SHJG_6493	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SHJG_6493	PWY-6728	methylaspartate cycle
SHJG_6493	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SHJG_6499	PWY-1042	glycolysis IV (plant cytosol)
SHJG_6499	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
SHJG_6499	PWY-5484	glycolysis II (from fructose 6-phosphate)
SHJG_6499	PWY-5723	Rubisco shunt
SHJG_6499	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SHJG_6499	PWY-6886	1-butanol autotrophic biosynthesis
SHJG_6499	PWY-6901	superpathway of glucose and xylose degradation
SHJG_6499	PWY-7003	glycerol degradation to butanol
SHJG_6499	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
SHJG_6499	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SHJG_6500	PWY-5482	pyruvate fermentation to acetate II
SHJG_6500	PWY-5485	pyruvate fermentation to acetate IV
SHJG_6500	PWY-5497	purine nucleobases degradation II (anaerobic)
SHJG_6501	PWY-1281	sulfoacetaldehyde degradation I
SHJG_6501	PWY-5482	pyruvate fermentation to acetate II
SHJG_6501	PWY-5485	pyruvate fermentation to acetate IV
SHJG_6501	PWY-5497	purine nucleobases degradation II (anaerobic)
SHJG_6501	PWY-6637	sulfolactate degradation II
SHJG_6502	PWY-1042	glycolysis IV (plant cytosol)
SHJG_6502	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SHJG_6502	PWY-5484	glycolysis II (from fructose 6-phosphate)
SHJG_6502	PWY-7385	1,3-propanediol biosynthesis (engineered)
SHJG_6518	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
SHJG_6518	PWY-622	starch biosynthesis
SHJG_6520	PWY-2622	trehalose biosynthesis IV
SHJG_6522	PWY-5941	glycogen degradation II (eukaryotic)
SHJG_6522	PWY-622	starch biosynthesis
SHJG_6522	PWY-6731	starch degradation III
SHJG_6522	PWY-6737	starch degradation V
SHJG_6522	PWY-7238	sucrose biosynthesis II
SHJG_6549	PWY-6871	3-methylbutanol biosynthesis
SHJG_6559	PWY-1622	formaldehyde assimilation I (serine pathway)
SHJG_6559	PWY-181	photorespiration
SHJG_6559	PWY-2161	folate polyglutamylation
SHJG_6559	PWY-2201	folate transformations I
SHJG_6559	PWY-3661	glycine betaine degradation I
SHJG_6559	PWY-3661-1	glycine betaine degradation II (mammalian)
SHJG_6559	PWY-3841	folate transformations II
SHJG_6559	PWY-5497	purine nucleobases degradation II (anaerobic)
SHJG_6578	PWY-6823	molybdenum cofactor biosynthesis
SHJG_6578	PWY-6891	thiazole biosynthesis II (Bacillus)
SHJG_6578	PWY-6892	thiazole biosynthesis I (E. coli)
SHJG_6578	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
SHJG_6585	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
SHJG_6585	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
SHJG_6585	PWY-6936	seleno-amino acid biosynthesis
SHJG_6585	PWY-702	L-methionine biosynthesis II
SHJG_6592	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
SHJG_6609	PWY-5101	L-isoleucine biosynthesis II
SHJG_6609	PWY-5103	L-isoleucine biosynthesis III
SHJG_6609	PWY-5104	L-isoleucine biosynthesis IV
SHJG_6609	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
SHJG_6609	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
SHJG_6609	PWY-6389	(<i>S</i>)-acetoin biosynthesis
SHJG_6609	PWY-7111	pyruvate fermentation to isobutanol (engineered)
SHJG_6610	PWY-5101	L-isoleucine biosynthesis II
SHJG_6610	PWY-5103	L-isoleucine biosynthesis III
SHJG_6610	PWY-5104	L-isoleucine biosynthesis IV
SHJG_6610	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
SHJG_6610	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
SHJG_6610	PWY-6389	(<i>S</i>)-acetoin biosynthesis
SHJG_6610	PWY-7111	pyruvate fermentation to isobutanol (engineered)
SHJG_6611	PWY-5101	L-isoleucine biosynthesis II
SHJG_6611	PWY-5103	L-isoleucine biosynthesis III
SHJG_6611	PWY-5104	L-isoleucine biosynthesis IV
SHJG_6611	PWY-7111	pyruvate fermentation to isobutanol (engineered)
SHJG_6616	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
SHJG_6616	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
SHJG_6617	PWY-6853	ethylene biosynthesis II (microbes)
SHJG_6624	PWY-7396	butanol and isobutanol biosynthesis (engineered)
SHJG_6625	PWY-5057	L-valine degradation II
SHJG_6625	PWY-5076	L-leucine degradation III
SHJG_6625	PWY-5078	L-isoleucine degradation II
SHJG_6625	PWY-5101	L-isoleucine biosynthesis II
SHJG_6625	PWY-5103	L-isoleucine biosynthesis III
SHJG_6625	PWY-5104	L-isoleucine biosynthesis IV
SHJG_6625	PWY-5108	L-isoleucine biosynthesis V
SHJG_6626	PWY-5704	urea degradation II
SHJG_6627	PWY-5704	urea degradation II
SHJG_6628	PWY-43	putrescine biosynthesis II
SHJG_6632	PWY-5101	L-isoleucine biosynthesis II
SHJG_6632	PWY-6871	3-methylbutanol biosynthesis
SHJG_6646	PWY-4381	fatty acid biosynthesis initiation I
SHJG_6646	PWY-5743	3-hydroxypropanoate cycle
SHJG_6646	PWY-5744	glyoxylate assimilation
SHJG_6646	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SHJG_6646	PWY-6679	jadomycin biosynthesis
SHJG_6646	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SHJG_6658	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SHJG_6669	PWY-5198	factor 420 biosynthesis
SHJG_6671	PWY-5667	CDP-diacylglycerol biosynthesis I
SHJG_6671	PWY-5981	CDP-diacylglycerol biosynthesis III
SHJG_6672	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHJG_6672	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHJG_6675	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
SHJG_6675	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
SHJG_6675	PWY-6896	thiamin salvage I
SHJG_6675	PWY-6897	thiamin salvage II
SHJG_6676	PWY-6910	hydroxymethylpyrimidine salvage
SHJG_6676	PWY-7356	thiamin salvage IV (yeast)
SHJG_6676	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
SHJG_6714	PWY-6829	tRNA methylation (yeast)
SHJG_6714	PWY-7285	methylwyosine biosynthesis
SHJG_6714	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
SHJG_6770	PWY-6902	chitin degradation II
SHJG_6783	PWY-7560	methylerythritol phosphate pathway II
SHJG_6785	PWY-7560	methylerythritol phosphate pathway II
SHJG_6800	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
SHJG_6800	PWY-6167	flavin biosynthesis II (archaea)
SHJG_6800	PWY-6168	flavin biosynthesis III (fungi)
SHJG_6826	PWY-2941	L-lysine biosynthesis II
SHJG_6826	PWY-2942	L-lysine biosynthesis III
SHJG_6826	PWY-5097	L-lysine biosynthesis VI
SHJG_6830	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SHJG_6831	PWY-2941	L-lysine biosynthesis II
SHJG_6831	PWY-2942	L-lysine biosynthesis III
SHJG_6831	PWY-5097	L-lysine biosynthesis VI
SHJG_6842	PWY-5269	cardiolipin biosynthesis II
SHJG_6842	PWY-5668	cardiolipin biosynthesis I
SHJG_6861	PWY-5331	taurine biosynthesis
SHJG_6888	PWY-2781	<i>cis</i>-zeatin biosynthesis
SHJG_6890	PWY-2941	L-lysine biosynthesis II
SHJG_6890	PWY-5097	L-lysine biosynthesis VI
SHJG_6897	PWY-6409	pyoverdine I biosynthesis
SHJG_6897	PWY-6562	norspermidine biosynthesis
SHJG_6897	PWY-761	rhizobactin 1021 biosynthesis
SHJG_6903	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SHJG_6903	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SHJG_6903	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SHJG_6903	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SHJG_6903	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHJG_6903	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHJG_6903	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
SHJG_6903	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
SHJG_6916	PWY-5941	glycogen degradation II (eukaryotic)
SHJG_6916	PWY-6724	starch degradation II
SHJG_6916	PWY-6737	starch degradation V
SHJG_6916	PWY-7238	sucrose biosynthesis II
SHJG_6947	PWY-5392	reductive TCA cycle II
SHJG_6947	PWY-5537	pyruvate fermentation to acetate V
SHJG_6947	PWY-5538	pyruvate fermentation to acetate VI
SHJG_6947	PWY-5690	TCA cycle II (plants and fungi)
SHJG_6947	PWY-5913	TCA cycle VI (obligate autotrophs)
SHJG_6947	PWY-6728	methylaspartate cycle
SHJG_6947	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHJG_6947	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SHJG_6951	PWY-7199	pyrimidine deoxyribonucleosides salvage
SHJG_6953	PWY-5350	thiosulfate disproportionation III (rhodanese)
SHJG_6955	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHJG_6955	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHJG_6966	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SHJG_6966	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SHJG_6966	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
SHJG_6966	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
SHJG_6984	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
SHJG_7000	PWY-6986	alginate degradation
SHJG_7006	PWY-6073	alginate biosynthesis I (algal)
SHJG_7006	PWY-6082	alginate biosynthesis II (bacterial)
SHJG_7009	PWY-5743	3-hydroxypropanoate cycle
SHJG_7009	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SHJG_7009	PWY-6728	methylaspartate cycle
SHJG_7009	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SHJG_7010	PWY-5743	3-hydroxypropanoate cycle
SHJG_7010	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SHJG_7010	PWY-6728	methylaspartate cycle
SHJG_7010	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SHJG_7037	PWY-4981	L-proline biosynthesis II (from arginine)
SHJG_7038	PWY-4981	L-proline biosynthesis II (from arginine)
SHJG_7038	PWY-4984	urea cycle
SHJG_7038	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SHJG_7069	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHJG_7069	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHJG_7085	PWY-6891	thiazole biosynthesis II (Bacillus)
SHJG_7085	PWY-6892	thiazole biosynthesis I (E. coli)
SHJG_7085	PWY-7560	methylerythritol phosphate pathway II
SHJG_7091	PWY-1361	benzoyl-CoA degradation I (aerobic)
SHJG_7091	PWY-5109	2-methylbutanoate biosynthesis
SHJG_7091	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
SHJG_7091	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
SHJG_7091	PWY-5177	glutaryl-CoA degradation
SHJG_7091	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SHJG_7091	PWY-6435	4-hydroxybenzoate biosynthesis V
SHJG_7091	PWY-6583	pyruvate fermentation to butanol I
SHJG_7091	PWY-6863	pyruvate fermentation to hexanol
SHJG_7091	PWY-6883	pyruvate fermentation to butanol II
SHJG_7091	PWY-6944	androstenedione degradation
SHJG_7091	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
SHJG_7091	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
SHJG_7091	PWY-7007	methyl ketone biosynthesis
SHJG_7091	PWY-7046	4-coumarate degradation (anaerobic)
SHJG_7091	PWY-7094	fatty acid salvage
SHJG_7091	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
SHJG_7091	PWY-735	jasmonic acid biosynthesis
SHJG_7091	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
SHJG_7096	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
SHJG_7096	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
SHJG_7101	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
SHJG_7101	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
SHJG_7117	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
SHJG_7117	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SHJG_7117	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SHJG_7117	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
SHJG_7122	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHJG_7122	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHJG_7153	PWY-2661	trehalose biosynthesis V
SHJG_7157	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
SHJG_7157	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
SHJG_7159	PWY-2661	trehalose biosynthesis V
SHJG_7171	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SHJG_7171	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
SHJG_7171	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
SHJG_7171	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SHJG_7175	PWY-6654	phosphopantothenate biosynthesis III
SHJG_7180	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SHJG_7184	PWY-5278	sulfite oxidation III
SHJG_7184	PWY-5340	sulfate activation for sulfonation
SHJG_7184	PWY-6683	sulfate reduction III (assimilatory)
SHJG_7184	PWY-6932	selenate reduction
SHJG_7185	PWY-5278	sulfite oxidation III
SHJG_7185	PWY-5340	sulfate activation for sulfonation
SHJG_7185	PWY-6683	sulfate reduction III (assimilatory)
SHJG_7185	PWY-6932	selenate reduction
SHJG_7186	PWY-5340	sulfate activation for sulfonation
SHJG_7189	PWY-6683	sulfate reduction III (assimilatory)
SHJG_7214	PWY-6807	xyloglucan degradation II (exoglucanase)
SHJG_7217	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHJG_7217	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHJG_7264	PWY-5506	methanol oxidation to formaldehyde IV
SHJG_7269	PWY-5691	urate degradation to allantoin I
SHJG_7269	PWY-7394	urate degradation to allantoin II
SHJG_7270	PWY-5691	urate degradation to allantoin I
SHJG_7270	PWY-7394	urate degradation to allantoin II
SHJG_7271	PWY-5691	urate degradation to allantoin I
SHJG_7291	PWY-6728	methylaspartate cycle
SHJG_7291	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHJG_7291	PWY-7118	chitin degradation to ethanol
SHJG_7291	PWY-7294	xylose degradation IV
SHJG_7291	PWY-7295	L-arabinose degradation IV
SHJG_7296	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
SHJG_7296	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
SHJG_7297	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
SHJG_7311	PWY-2723	trehalose degradation V
SHJG_7311	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
SHJG_7311	PWY-5661	GDP-glucose biosynthesis
SHJG_7311	PWY-7238	sucrose biosynthesis II
SHJG_7311	PWY-7385	1,3-propanediol biosynthesis (engineered)
SHJG_7333	PWY-3801	sucrose degradation II (sucrose synthase)
SHJG_7333	PWY-6527	stachyose degradation
SHJG_7333	PWY-6981	chitin biosynthesis
SHJG_7333	PWY-7238	sucrose biosynthesis II
SHJG_7333	PWY-7343	UDP-glucose biosynthesis
SHJG_7347	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHJG_7347	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHJG_7384	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
SHJG_7384	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
SHJG_7384	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
SHJG_7393	PWY-4041	&gamma;-glutamyl cycle
SHJG_7393	PWY-5826	hypoglycin biosynthesis
SHJG_7409	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
SHJG_7409	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
SHJG_7413	PWY-4041	&gamma;-glutamyl cycle
SHJG_7413	PWY-5826	hypoglycin biosynthesis
SHJG_7418	PWY-2201	folate transformations I
SHJG_7418	PWY-3841	folate transformations II
SHJG_7428	PWY-5669	phosphatidylethanolamine biosynthesis I
SHJG_7429	PWY-5669	phosphatidylethanolamine biosynthesis I
SHJG_7433	PWY-5743	3-hydroxypropanoate cycle
SHJG_7433	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SHJG_7433	PWY-6728	methylaspartate cycle
SHJG_7433	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SHJG_7436	PWY-1361	benzoyl-CoA degradation I (aerobic)
SHJG_7436	PWY-5109	2-methylbutanoate biosynthesis
SHJG_7436	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
SHJG_7436	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
SHJG_7436	PWY-5177	glutaryl-CoA degradation
SHJG_7436	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SHJG_7436	PWY-6435	4-hydroxybenzoate biosynthesis V
SHJG_7436	PWY-6583	pyruvate fermentation to butanol I
SHJG_7436	PWY-6863	pyruvate fermentation to hexanol
SHJG_7436	PWY-6883	pyruvate fermentation to butanol II
SHJG_7436	PWY-6944	androstenedione degradation
SHJG_7436	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
SHJG_7436	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
SHJG_7436	PWY-7007	methyl ketone biosynthesis
SHJG_7436	PWY-7046	4-coumarate degradation (anaerobic)
SHJG_7436	PWY-7094	fatty acid salvage
SHJG_7436	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
SHJG_7436	PWY-735	jasmonic acid biosynthesis
SHJG_7436	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
SHJG_7455	PWY-6891	thiazole biosynthesis II (Bacillus)
SHJG_7455	PWY-6892	thiazole biosynthesis I (E. coli)
SHJG_7455	PWY-7560	methylerythritol phosphate pathway II
SHJG_7469	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
SHJG_7469	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
SHJG_7469	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
SHJG_7490	PWY-7158	L-phenylalanine degradation V
SHJG_7517	PWY-6654	phosphopantothenate biosynthesis III
SHJG_7520	PWY-4381	fatty acid biosynthesis initiation I
SHJG_7524	PWY-5392	reductive TCA cycle II
SHJG_7524	PWY-5537	pyruvate fermentation to acetate V
SHJG_7524	PWY-5538	pyruvate fermentation to acetate VI
SHJG_7524	PWY-5690	TCA cycle II (plants and fungi)
SHJG_7524	PWY-5913	TCA cycle VI (obligate autotrophs)
SHJG_7524	PWY-6728	methylaspartate cycle
SHJG_7524	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHJG_7524	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SHJG_7525	PWY-6695	oxalate degradation II
SHJG_7527	PWY-5392	reductive TCA cycle II
SHJG_7527	PWY-5537	pyruvate fermentation to acetate V
SHJG_7527	PWY-5538	pyruvate fermentation to acetate VI
SHJG_7527	PWY-5690	TCA cycle II (plants and fungi)
SHJG_7527	PWY-5913	TCA cycle VI (obligate autotrophs)
SHJG_7527	PWY-6728	methylaspartate cycle
SHJG_7527	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHJG_7527	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SHJG_7528	PWY-5392	reductive TCA cycle II
SHJG_7528	PWY-5537	pyruvate fermentation to acetate V
SHJG_7528	PWY-5538	pyruvate fermentation to acetate VI
SHJG_7528	PWY-5690	TCA cycle II (plants and fungi)
SHJG_7528	PWY-5913	TCA cycle VI (obligate autotrophs)
SHJG_7528	PWY-6728	methylaspartate cycle
SHJG_7528	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHJG_7528	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SHJG_7534	PWY-3121	linamarin degradation
SHJG_7534	PWY-5176	coumarin biosynthesis (via 2-coumarate)
SHJG_7534	PWY-6002	lotaustralin degradation
SHJG_7534	PWY-6788	cellulose degradation II (fungi)
SHJG_7534	PWY-7089	taxiphyllin bioactivation
SHJG_7534	PWY-7091	linustatin bioactivation
SHJG_7534	PWY-7092	neolinustatin bioactivation
SHJG_7556	PWY-6168	flavin biosynthesis III (fungi)
SHJG_7556	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
SHJG_7563	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
SHJG_7563	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SHJG_7568	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SHJG_7573	PWY-3801	sucrose degradation II (sucrose synthase)
SHJG_7573	PWY-5054	sorbitol biosynthesis I
SHJG_7573	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
SHJG_7573	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
SHJG_7573	PWY-5659	GDP-mannose biosynthesis
SHJG_7573	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SHJG_7573	PWY-621	sucrose degradation III (sucrose invertase)
SHJG_7573	PWY-622	starch biosynthesis
SHJG_7573	PWY-6531	mannitol cycle
SHJG_7573	PWY-6981	chitin biosynthesis
SHJG_7573	PWY-7238	sucrose biosynthesis II
SHJG_7573	PWY-7347	sucrose biosynthesis III
SHJG_7573	PWY-7385	1,3-propanediol biosynthesis (engineered)
SHJG_7575	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
SHJG_7576	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SHJG_7576	PWY-5723	Rubisco shunt
SHJG_7577	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SHJG_7577	PWY-5723	Rubisco shunt
SHJG_7577	PWY-6891	thiazole biosynthesis II (Bacillus)
SHJG_7577	PWY-6892	thiazole biosynthesis I (E. coli)
SHJG_7577	PWY-6901	superpathway of glucose and xylose degradation
SHJG_7577	PWY-7560	methylerythritol phosphate pathway II
SHJG_7585	PWY-6012	acyl carrier protein metabolism I
SHJG_7585	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
SHJG_7604	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
SHJG_7605	PWY-6123	inosine-5'-phosphate biosynthesis I
SHJG_7605	PWY-6124	inosine-5'-phosphate biosynthesis II
SHJG_7605	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SHJG_7605	PWY-7234	inosine-5'-phosphate biosynthesis III
SHJG_7615	PWY-5147	oleate biosynthesis I (plants)
SHJG_7616	PWY-4981	L-proline biosynthesis II (from arginine)
SHJG_7626	PWY-1361	benzoyl-CoA degradation I (aerobic)
SHJG_7626	PWY-5109	2-methylbutanoate biosynthesis
SHJG_7626	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
SHJG_7626	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
SHJG_7626	PWY-5177	glutaryl-CoA degradation
SHJG_7626	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SHJG_7626	PWY-6435	4-hydroxybenzoate biosynthesis V
SHJG_7626	PWY-6583	pyruvate fermentation to butanol I
SHJG_7626	PWY-6863	pyruvate fermentation to hexanol
SHJG_7626	PWY-6883	pyruvate fermentation to butanol II
SHJG_7626	PWY-6944	androstenedione degradation
SHJG_7626	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
SHJG_7626	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
SHJG_7626	PWY-7007	methyl ketone biosynthesis
SHJG_7626	PWY-7046	4-coumarate degradation (anaerobic)
SHJG_7626	PWY-7094	fatty acid salvage
SHJG_7626	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
SHJG_7626	PWY-735	jasmonic acid biosynthesis
SHJG_7626	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
SHJG_7640	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
SHJG_7640	PWY-6174	mevalonate pathway II (archaea)
SHJG_7640	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
SHJG_7640	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
SHJG_7640	PWY-7102	bisabolene biosynthesis
SHJG_7640	PWY-7391	isoprene biosynthesis II (engineered)
SHJG_7640	PWY-7524	mevalonate pathway III (archaea)
SHJG_7640	PWY-7560	methylerythritol phosphate pathway II
SHJG_7640	PWY-922	mevalonate pathway I
SHJG_7642	PWY-3821	galactose degradation III
SHJG_7642	PWY-6317	galactose degradation I (Leloir pathway)
SHJG_7642	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
SHJG_7642	PWY-6527	stachyose degradation
SHJG_7642	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
SHJG_7642	PWY-7344	UDP-D-galactose biosynthesis
SHJG_7645	PWY-6349	CDP-archaeol biosynthesis
SHJG_7654	PWY-6098	diploterol and cycloartenol biosynthesis
SHJG_7654	PWY-7072	hopanoid biosynthesis (bacteria)
SHJG_7657	PWY-7560	methylerythritol phosphate pathway II
SHJG_7658	PWY-6891	thiazole biosynthesis II (Bacillus)
SHJG_7658	PWY-6892	thiazole biosynthesis I (E. coli)
SHJG_7658	PWY-7560	methylerythritol phosphate pathway II
SHJG_7663	PWY-6527	stachyose degradation
SHJG_7674	PWY-7378	aminopropanol phosphate biosynthesis II
SHJG_7682	PWY-6891	thiazole biosynthesis II (Bacillus)
SHJG_7682	PWY-6892	thiazole biosynthesis I (E. coli)
SHJG_7682	PWY-7560	methylerythritol phosphate pathway II
SHJG_7685	PWY-381	nitrate reduction II (assimilatory)
SHJG_7685	PWY-5675	nitrate reduction V (assimilatory)
SHJG_7685	PWY-6549	L-glutamine biosynthesis III
SHJG_7685	PWY-6963	ammonia assimilation cycle I
SHJG_7685	PWY-6964	ammonia assimilation cycle II
SHJG_7698	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
SHJG_7704	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
SHJG_7705	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
SHJG_7713	PWY-6807	xyloglucan degradation II (exoglucanase)
SHJG_7729	PWY-5692	allantoin degradation to glyoxylate II
SHJG_7729	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
SHJG_7744	PWY-4061	glutathione-mediated detoxification I
SHJG_7744	PWY-6842	glutathione-mediated detoxification II
SHJG_7744	PWY-7112	4-hydroxy-2-nonenal detoxification
SHJG_7744	PWY-7533	gliotoxin biosynthesis
SHJG_7759	PWY-5913	TCA cycle VI (obligate autotrophs)
SHJG_7759	PWY-6549	L-glutamine biosynthesis III
SHJG_7759	PWY-6728	methylaspartate cycle
SHJG_7759	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHJG_7759	PWY-7124	ethylene biosynthesis V (engineered)
SHJG_7759	PWY-7254	TCA cycle VII (acetate-producers)
SHJG_7759	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
SHJG_7764	PWY-4261	glycerol degradation I
SHJG_7784	PWY-2582	brassinosteroid biosynthesis II
SHJG_7784	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
SHJG_7784	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
SHJG_7784	PWY-6948	sitosterol degradation to androstenedione
SHJG_7784	PWY-699	brassinosteroid biosynthesis I
SHJG_7784	PWY-7299	progesterone biosynthesis
SHJG_7785	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
SHJG_7786	PWY-6785	hydrogen production VIII
SHJG_7799	PWY-6840	homoglutathione biosynthesis
SHJG_7799	PWY-7255	ergothioneine biosynthesis I (bacteria)
SHJG_7832	PWY-5155	&beta;-alanine biosynthesis III
SHJG_7839	PWY-622	starch biosynthesis
SHJG_7840	PWY-622	starch biosynthesis
SHJG_7847	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
SHJG_7881	PWY-3781	aerobic respiration I (cytochrome c)
SHJG_7881	PWY-4302	aerobic respiration III (alternative oxidase pathway)
SHJG_7881	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SHJG_7881	PWY-5690	TCA cycle II (plants and fungi)
SHJG_7881	PWY-6728	methylaspartate cycle
SHJG_7881	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHJG_7881	PWY-7254	TCA cycle VII (acetate-producers)
SHJG_7881	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SHJG_7882	PWY-3781	aerobic respiration I (cytochrome c)
SHJG_7882	PWY-4302	aerobic respiration III (alternative oxidase pathway)
SHJG_7882	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SHJG_7882	PWY-5690	TCA cycle II (plants and fungi)
SHJG_7882	PWY-6728	methylaspartate cycle
SHJG_7882	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHJG_7882	PWY-7254	TCA cycle VII (acetate-producers)
SHJG_7882	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SHJG_7895	PWY-6840	homoglutathione biosynthesis
SHJG_7895	PWY-7255	ergothioneine biosynthesis I (bacteria)
SHJG_7903	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
SHJG_7984	PWY-5506	methanol oxidation to formaldehyde IV
SHJG_7995	PWY-3121	linamarin degradation
SHJG_7995	PWY-5176	coumarin biosynthesis (via 2-coumarate)
SHJG_7995	PWY-6002	lotaustralin degradation
SHJG_7995	PWY-6788	cellulose degradation II (fungi)
SHJG_7995	PWY-7089	taxiphyllin bioactivation
SHJG_7995	PWY-7091	linustatin bioactivation
SHJG_7995	PWY-7092	neolinustatin bioactivation
SHJG_8004	PWY-5506	methanol oxidation to formaldehyde IV
SHJG_8009	PWY-5491	diethylphosphate degradation
SHJG_8019	PWY-5692	allantoin degradation to glyoxylate II
SHJG_8019	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
SHJG_8055	PWY-5451	acetone degradation I (to methylglyoxal)
SHJG_8055	PWY-5665	vanillin biosynthesis I
SHJG_8055	PWY-6398	melatonin degradation I
SHJG_8055	PWY-6992	1,5-anhydrofructose degradation
SHJG_8055	PWY-7466	acetone degradation III (to propane-1,2-diol)
SHJG_8078	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
SHJG_8078	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SHJG_8081	PWY-4061	glutathione-mediated detoxification I
SHJG_8081	PWY-6842	glutathione-mediated detoxification II
SHJG_8081	PWY-7112	4-hydroxy-2-nonenal detoxification
SHJG_8081	PWY-7533	gliotoxin biosynthesis
SHJG_8098	PWY-6807	xyloglucan degradation II (exoglucanase)
SHJG_8135	PWY-3221	dTDP-L-rhamnose biosynthesis II
SHJG_8135	PWY-6808	dTDP-D-forosamine biosynthesis
SHJG_8135	PWY-6942	dTDP-D-desosamine biosynthesis
SHJG_8135	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
SHJG_8135	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
SHJG_8135	PWY-6974	dTDP-L-olivose biosynthesis
SHJG_8135	PWY-6976	dTDP-L-mycarose biosynthesis
SHJG_8135	PWY-7104	dTDP-L-megosamine biosynthesis
SHJG_8135	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
SHJG_8135	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
SHJG_8135	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
SHJG_8135	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
SHJG_8135	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
SHJG_8135	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
SHJG_8135	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
SHJG_8135	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
SHJG_8139	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHJG_8139	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHJG_8152	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SHJG_8152	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
SHJG_8152	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
SHJG_8152	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SHJG_8154	PWY-3781	aerobic respiration I (cytochrome c)
SHJG_8154	PWY-4521	arsenite oxidation I (respiratory)
SHJG_8154	PWY-6692	Fe(II) oxidation
SHJG_8154	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SHJG_8157	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
SHJG_8157	PWY-2201	folate transformations I
SHJG_8157	PWY-3841	folate transformations II
SHJG_8157	PWY-5030	L-histidine degradation III
SHJG_8157	PWY-5497	purine nucleobases degradation II (anaerobic)
SHJG_8157	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
SHJG_8172	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
SHJG_8172	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SHJG_8189	PWY-7193	pyrimidine ribonucleosides salvage I
SHJG_8236	PWY-5750	itaconate biosynthesis
SHJG_8236	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SHJG_8236	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
SHJG_8248	PWY-5506	methanol oxidation to formaldehyde IV
SHJG_8293	PWY-5451	acetone degradation I (to methylglyoxal)
SHJG_8293	PWY-6588	pyruvate fermentation to acetone
SHJG_8293	PWY-6876	isopropanol biosynthesis
SHJG_8293	PWY-7466	acetone degradation III (to propane-1,2-diol)
SHJG_8305	PWY-6840	homoglutathione biosynthesis
SHJG_8305	PWY-7255	ergothioneine biosynthesis I (bacteria)
SHJG_8311	PWY-4261	glycerol degradation I
SHJG_8311	PWY-6118	glycerol-3-phosphate shuttle
SHJG_8311	PWY-6952	glycerophosphodiester degradation
SHJG_8313	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SHJG_8313	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SHJG_8326	PWY-2582	brassinosteroid biosynthesis II
SHJG_8326	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
SHJG_8326	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
SHJG_8326	PWY-6948	sitosterol degradation to androstenedione
SHJG_8326	PWY-699	brassinosteroid biosynthesis I
SHJG_8326	PWY-7299	progesterone biosynthesis
SHJG_8387	PWY-6902	chitin degradation II
SHJG_8389	PWY-6986	alginate degradation
SHJG_8395	PWY-6807	xyloglucan degradation II (exoglucanase)
SHJG_8396	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
SHJG_8396	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SHJG_8422	PWY-6527	stachyose degradation
SHJG_8426	PWY-6527	stachyose degradation
SHJG_8431	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
SHJG_8431	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
SHJG_8431	PWY-7242	D-fructuronate degradation
SHJG_8431	PWY-7310	D-glucosaminate degradation
SHJG_8448	PWY-6807	xyloglucan degradation II (exoglucanase)
SHJG_8471	PWY-7158	L-phenylalanine degradation V
SHJG_8483	PWY-6164	3-dehydroquinate biosynthesis I
SHJG_8487	PWY-3581	(<i>S</i>)-reticuline biosynthesis I
SHJG_8487	PWY-5254	methanofuran biosynthesis
SHJG_8487	PWY-5474	hydroxycinnamic acid tyramine amides biosynthesis
SHJG_8487	PWY-6133	(S)-reticuline biosynthesis II
SHJG_8487	PWY-6802	salidroside biosynthesis
SHJG_8487	PWY-7297	octopamine biosynthesis
SHJG_8517	PWY-5839	menaquinol-7 biosynthesis
SHJG_8517	PWY-5844	menaquinol-9 biosynthesis
SHJG_8517	PWY-5849	menaquinol-6 biosynthesis
SHJG_8517	PWY-5890	menaquinol-10 biosynthesis
SHJG_8517	PWY-5891	menaquinol-11 biosynthesis
SHJG_8517	PWY-5892	menaquinol-12 biosynthesis
SHJG_8517	PWY-5895	menaquinol-13 biosynthesis
SHJG_8537	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
SHJG_8537	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SHJG_8537	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SHJG_8537	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
SHJG_8580	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
SHJG_8580	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
SHJG_8619	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
SHJG_8619	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
SHJG_8634	PWY-4041	&gamma;-glutamyl cycle
SHJG_8634	PWY-5826	hypoglycin biosynthesis
SHJG_8658	PWY-101	photosynthesis light reactions
SHJG_8658	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
SHJG_8672	PWY-5751	phenylethanol biosynthesis
SHJG_8676	PWY-4981	L-proline biosynthesis II (from arginine)
SHJG_8729	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
SHJG_8729	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
SHJG_8783	PWY-5381	pyridine nucleotide cycling (plants)
SHJG_8786	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SHJG_8787	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SHJG_8800	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
SHJG_8800	PWY-6549	L-glutamine biosynthesis III
SHJG_8800	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SHJG_8800	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
SHJG_8804	PWY-5392	reductive TCA cycle II
SHJG_8804	PWY-5537	pyruvate fermentation to acetate V
SHJG_8804	PWY-5538	pyruvate fermentation to acetate VI
SHJG_8804	PWY-5690	TCA cycle II (plants and fungi)
SHJG_8804	PWY-5913	TCA cycle VI (obligate autotrophs)
SHJG_8804	PWY-6728	methylaspartate cycle
SHJG_8804	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SHJG_8804	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SHJG_8818	PWY-6825	phosphatidylcholine biosynthesis V
SHJG_8859	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
SHJG_8859	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SHJG_8859	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SHJG_8859	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
