SiRe_0005 PWY-7158 L-phenylalanine degradation V SiRe_0019 PWY-6700 queuosine biosynthesis SiRe_0030 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II SiRe_0030 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I SiRe_0030 PWY-6269 adenosylcobalamin salvage from cobinamide II SiRe_0035 PWY-5083 NAD/NADH phosphorylation and dephosphorylation SiRe_0035 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) SiRe_0035 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) SiRe_0038 PWY-101 photosynthesis light reactions SiRe_0038 PWY-7230 ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic) SiRe_0039 PWY-6829 tRNA methylation (yeast) SiRe_0039 PWY-7285 methylwyosine biosynthesis SiRe_0039 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis SiRe_0066 PWY-6938 NADH repair SiRe_0068 PWY-1622 formaldehyde assimilation I (serine pathway) SiRe_0068 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type SiRe_0068 PWY-5913 TCA cycle VI (obligate autotrophs) SiRe_0068 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) SiRe_0068 PWY-6146 Methanobacterium thermoautotrophicum biosynthetic metabolism SiRe_0068 PWY-6549 L-glutamine biosynthesis III SiRe_0068 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type SiRe_0068 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type SiRe_0068 PWY-7124 ethylene biosynthesis V (engineered) SiRe_0083 PWY-2941 L-lysine biosynthesis II SiRe_0083 PWY-2942 L-lysine biosynthesis III SiRe_0083 PWY-5097 L-lysine biosynthesis VI SiRe_0091 PWY-3801 sucrose degradation II (sucrose synthase) SiRe_0091 PWY-3861 mannitol degradation II SiRe_0091 PWY-3881 mannitol biosynthesis SiRe_0091 PWY-5054 sorbitol biosynthesis I SiRe_0091 PWY-5384 sucrose degradation IV (sucrose phosphorylase) SiRe_0091 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II SiRe_0091 PWY-5659 GDP-mannose biosynthesis SiRe_0091 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) SiRe_0091 PWY-621 sucrose degradation III (sucrose invertase) SiRe_0091 PWY-622 starch biosynthesis SiRe_0091 PWY-6531 mannitol cycle SiRe_0091 PWY-6981 chitin biosynthesis SiRe_0091 PWY-7238 sucrose biosynthesis II SiRe_0091 PWY-7347 sucrose biosynthesis III SiRe_0091 PWY-7385 1,3-propanediol biosynthesis (engineered) SiRe_0091 PWY-7456 mannan degradation SiRe_0091 PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) SiRe_0106 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) SiRe_0107 PWY-5194 siroheme biosynthesis SiRe_0107 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) SiRe_0108 PWY-5194 siroheme biosynthesis SiRe_0108 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) SiRe_0109 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) SiRe_0110 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) SiRe_0112 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) SiRe_0155 PWY-3781 aerobic respiration I (cytochrome c) SiRe_0155 PWY-4302 aerobic respiration III (alternative oxidase pathway) SiRe_0155 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation SiRe_0155 PWY-5690 TCA cycle II (plants and fungi) SiRe_0155 PWY-6728 methylaspartate cycle SiRe_0155 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) SiRe_0155 PWY-7254 TCA cycle VII (acetate-producers) SiRe_0155 PWY-7279 aerobic respiration II (cytochrome c) (yeast) SiRe_0156 PWY-3781 aerobic respiration I (cytochrome c) SiRe_0156 PWY-4302 aerobic respiration III (alternative oxidase pathway) SiRe_0156 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation SiRe_0156 PWY-5690 TCA cycle II (plants and fungi) SiRe_0156 PWY-6728 methylaspartate cycle SiRe_0156 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) SiRe_0156 PWY-7254 TCA cycle VII (acetate-producers) SiRe_0156 PWY-7279 aerobic respiration II (cytochrome c) (yeast) SiRe_0163 PWY-6823 molybdenum cofactor biosynthesis SiRe_0164 PWY-702 L-methionine biosynthesis II SiRe_0185 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) SiRe_0185 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) SiRe_0185 PWY-6897 thiamin salvage II SiRe_0185 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) SiRe_0185 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) SiRe_0185 PWY-6910 hydroxymethylpyrimidine salvage SiRe_0185 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) SiRe_0185 PWY-7356 thiamin salvage IV (yeast) SiRe_0185 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) SiRe_0186 PWY-6823 molybdenum cofactor biosynthesis SiRe_0189 PWY-6654 phosphopantothenate biosynthesis III SiRe_0191 PWY-6654 phosphopantothenate biosynthesis III SiRe_0199 PWY-6871 3-methylbutanol biosynthesis SiRe_0200 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I SiRe_0200 PWY-6148 tetrahydromethanopterin biosynthesis SiRe_0200 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) SiRe_0200 PWY-6898 thiamin salvage III SiRe_0200 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) SiRe_0200 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) SiRe_0200 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) SiRe_0214 PWY-5743 3-hydroxypropanoate cycle SiRe_0214 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle SiRe_0214 PWY-6728 methylaspartate cycle SiRe_0214 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) SiRe_0215 PWY-5386 methylglyoxal degradation I SiRe_0215 PWY-5743 3-hydroxypropanoate cycle SiRe_0215 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle SiRe_0215 PWY-6728 methylaspartate cycle SiRe_0215 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) SiRe_0225 PWY-5194 siroheme biosynthesis SiRe_0225 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) SiRe_0230 PWY-6829 tRNA methylation (yeast) SiRe_0230 PWY-7285 methylwyosine biosynthesis SiRe_0230 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis SiRe_0231 PWY-381 nitrate reduction II (assimilatory) SiRe_0231 PWY-5675 nitrate reduction V (assimilatory) SiRe_0231 PWY-6549 L-glutamine biosynthesis III SiRe_0231 PWY-6963 ammonia assimilation cycle I SiRe_0231 PWY-6964 ammonia assimilation cycle II SiRe_0239 PWY-7221 guanosine ribonucleotides de novo biosynthesis SiRe_0252 PWY-4381 fatty acid biosynthesis initiation I SiRe_0252 PWY-5743 3-hydroxypropanoate cycle SiRe_0252 PWY-5744 glyoxylate assimilation SiRe_0252 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle SiRe_0252 PWY-6679 jadomycin biosynthesis SiRe_0252 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) SiRe_0276 PWY-5392 reductive TCA cycle II SiRe_0276 PWY-5537 pyruvate fermentation to acetate V SiRe_0276 PWY-5538 pyruvate fermentation to acetate VI SiRe_0276 PWY-5690 TCA cycle II (plants and fungi) SiRe_0276 PWY-5913 TCA cycle VI (obligate autotrophs) SiRe_0276 PWY-6728 methylaspartate cycle SiRe_0276 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) SiRe_0276 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) SiRe_0277 PWY-5392 reductive TCA cycle II SiRe_0277 PWY-5537 pyruvate fermentation to acetate V SiRe_0277 PWY-5538 pyruvate fermentation to acetate VI SiRe_0277 PWY-5690 TCA cycle II (plants and fungi) SiRe_0277 PWY-5913 TCA cycle VI (obligate autotrophs) SiRe_0277 PWY-6728 methylaspartate cycle SiRe_0277 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) SiRe_0277 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) SiRe_0293 PWY-5686 UMP biosynthesis SiRe_0294 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III SiRe_0294 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I SiRe_0294 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV SiRe_0294 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP SiRe_0294 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II SiRe_0294 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II SiRe_0294 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I SiRe_0294 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis SiRe_0307 PWY-1361 benzoyl-CoA degradation I (aerobic) SiRe_0307 PWY-5109 2-methylbutanoate biosynthesis SiRe_0307 PWY-5136 fatty acid β-oxidation II (peroxisome) SiRe_0307 PWY-5138 unsaturated, even numbered fatty acid β-oxidation SiRe_0307 PWY-5177 glutaryl-CoA degradation SiRe_0307 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle SiRe_0307 PWY-6435 4-hydroxybenzoate biosynthesis V SiRe_0307 PWY-6583 pyruvate fermentation to butanol I SiRe_0307 PWY-6863 pyruvate fermentation to hexanol SiRe_0307 PWY-6883 pyruvate fermentation to butanol II SiRe_0307 PWY-6944 androstenedione degradation SiRe_0307 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) SiRe_0307 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) SiRe_0307 PWY-7007 methyl ketone biosynthesis SiRe_0307 PWY-7046 4-coumarate degradation (anaerobic) SiRe_0307 PWY-7094 fatty acid salvage SiRe_0307 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis SiRe_0307 PWY-735 jasmonic acid biosynthesis SiRe_0307 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) SiRe_0319 PWY-4261 glycerol degradation I SiRe_0319 PWY-6118 glycerol-3-phosphate shuttle SiRe_0319 PWY-6952 glycerophosphodiester degradation SiRe_0332 PWY-6784 cellulose and hemicellulose degradation (cellulolosome) SiRe_0345 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation SiRe_0360 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III SiRe_0360 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I SiRe_0360 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II SiRe_0360 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation SiRe_0360 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV SiRe_0360 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP SiRe_0372 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) SiRe_0372 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) SiRe_0376 PWY-5642 2,4-dinitrotoluene degradation SiRe_0376 PWY-6373 acrylate degradation SiRe_0379 PWY-5451 acetone degradation I (to methylglyoxal) SiRe_0379 PWY-6588 pyruvate fermentation to acetone SiRe_0379 PWY-6876 isopropanol biosynthesis SiRe_0379 PWY-7466 acetone degradation III (to propane-1,2-diol) SiRe_0398 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) SiRe_0423 PWY-6749 CMP-legionaminate biosynthesis I SiRe_0486 PWY-2661 trehalose biosynthesis V SiRe_0490 PWY-2661 trehalose biosynthesis V SiRe_0492 PWY-6167 flavin biosynthesis II (archaea) SiRe_0492 PWY-6168 flavin biosynthesis III (fungi) SiRe_0511 PWY-4261 glycerol degradation I SiRe_0538 PWY-3781 aerobic respiration I (cytochrome c) SiRe_0538 PWY-4521 arsenite oxidation I (respiratory) SiRe_0538 PWY-6692 Fe(II) oxidation SiRe_0538 PWY-7279 aerobic respiration II (cytochrome c) (yeast) SiRe_0543 PWY-6823 molybdenum cofactor biosynthesis SiRe_0570 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) SiRe_0578 PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde SiRe_0578 PWY-6309 L-tryptophan degradation XI (mammalian, via kynurenine) SiRe_0635 PWY-7533 gliotoxin biosynthesis SiRe_0641 PWY-5303 thiosulfate oxidation II (via tetrathionate) SiRe_0642 PWY-5303 thiosulfate oxidation II (via tetrathionate) SiRe_0648 PWY-5839 menaquinol-7 biosynthesis SiRe_0648 PWY-5844 menaquinol-9 biosynthesis SiRe_0648 PWY-5849 menaquinol-6 biosynthesis SiRe_0648 PWY-5890 menaquinol-10 biosynthesis SiRe_0648 PWY-5891 menaquinol-11 biosynthesis SiRe_0648 PWY-5892 menaquinol-12 biosynthesis SiRe_0648 PWY-5895 menaquinol-13 biosynthesis SiRe_0652 PWY-5392 reductive TCA cycle II SiRe_0652 PWY-5537 pyruvate fermentation to acetate V SiRe_0652 PWY-5538 pyruvate fermentation to acetate VI SiRe_0652 PWY-5690 TCA cycle II (plants and fungi) SiRe_0652 PWY-5913 TCA cycle VI (obligate autotrophs) SiRe_0652 PWY-6728 methylaspartate cycle SiRe_0652 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) SiRe_0652 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) SiRe_0707 PWY-5386 methylglyoxal degradation I SiRe_0741 PWY-6728 methylaspartate cycle SiRe_0741 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) SiRe_0741 PWY-7118 chitin degradation to ethanol SiRe_0741 PWY-7294 xylose degradation IV SiRe_0741 PWY-7295 L-arabinose degradation IV SiRe_0742 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) SiRe_0753 PWY-5101 L-isoleucine biosynthesis II SiRe_0753 PWY-5103 L-isoleucine biosynthesis III SiRe_0753 PWY-5104 L-isoleucine biosynthesis IV SiRe_0753 PWY-7111 pyruvate fermentation to isobutanol (engineered) SiRe_0755 PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis SiRe_0791 PWY-6784 cellulose and hemicellulose degradation (cellulolosome) SiRe_0840 PWY-3221 dTDP-L-rhamnose biosynthesis II SiRe_0840 PWY-6808 dTDP-D-forosamine biosynthesis SiRe_0840 PWY-6942 dTDP-D-desosamine biosynthesis SiRe_0840 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis SiRe_0840 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis SiRe_0840 PWY-6974 dTDP-L-olivose biosynthesis SiRe_0840 PWY-6976 dTDP-L-mycarose biosynthesis SiRe_0840 PWY-7104 dTDP-L-megosamine biosynthesis SiRe_0840 PWY-7301 dTDP-β-L-noviose biosynthesis SiRe_0840 PWY-7312 dTDP-D-β-fucofuranose biosynthesis SiRe_0840 PWY-7315 dTDP-N-acetylthomosamine biosynthesis SiRe_0840 PWY-7316 dTDP-N-acetylviosamine biosynthesis SiRe_0840 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis SiRe_0840 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis SiRe_0840 PWY-7414 dTDP-α-D-mycaminose biosynthesis SiRe_0840 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis SiRe_0846 PWY-6829 tRNA methylation (yeast) SiRe_0846 PWY-7285 methylwyosine biosynthesis SiRe_0846 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis SiRe_0940 PWY-7425 2-chloroacrylate degradation I SiRe_0959 PWY-4981 L-proline biosynthesis II (from arginine) SiRe_0988 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) SiRe_0988 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) SiRe_1012 PWY-6829 tRNA methylation (yeast) SiRe_1012 PWY-7285 methylwyosine biosynthesis SiRe_1012 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis SiRe_1020 PWY-5392 reductive TCA cycle II SiRe_1020 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation SiRe_1020 PWY-5690 TCA cycle II (plants and fungi) SiRe_1020 PWY-5913 TCA cycle VI (obligate autotrophs) SiRe_1020 PWY-6728 methylaspartate cycle SiRe_1020 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) SiRe_1020 PWY-7254 TCA cycle VII (acetate-producers) SiRe_1020 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) SiRe_1028 PWY-6123 inosine-5'-phosphate biosynthesis I SiRe_1028 PWY-7234 inosine-5'-phosphate biosynthesis III SiRe_1029 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) SiRe_1029 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) SiRe_1033 PWY-6984 lipoate salvage II SiRe_1033 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) SiRe_1033 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) SiRe_1068 PWY-1881 formate oxidation to CO2 SiRe_1068 PWY-5497 purine nucleobases degradation II (anaerobic) SiRe_1068 PWY-6696 oxalate degradation III SiRe_1080 PWY-5350 thiosulfate disproportionation III (rhodanese) SiRe_1089 PWY-5316 nicotine biosynthesis SiRe_1089 PWY-7342 superpathway of nicotine biosynthesis SiRe_1091 PWY-5316 nicotine biosynthesis SiRe_1091 PWY-5381 pyridine nucleotide cycling (plants) SiRe_1091 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde SiRe_1091 PWY-7342 superpathway of nicotine biosynthesis SiRe_1095 PWY-5941 glycogen degradation II (eukaryotic) SiRe_1095 PWY-6724 starch degradation II SiRe_1095 PWY-6737 starch degradation V SiRe_1095 PWY-7238 sucrose biosynthesis II SiRe_1099 PWY-622 starch biosynthesis SiRe_1105 PWY-1042 glycolysis IV (plant cytosol) SiRe_1105 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) SiRe_1105 PWY-5484 glycolysis II (from fructose 6-phosphate) SiRe_1105 PWY-5723 Rubisco shunt SiRe_1105 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) SiRe_1105 PWY-6886 1-butanol autotrophic biosynthesis SiRe_1105 PWY-6901 superpathway of glucose and xylose degradation SiRe_1105 PWY-7003 glycerol degradation to butanol SiRe_1105 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) SiRe_1105 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) SiRe_1107 PWY-1861 formaldehyde assimilation II (RuMP Cycle) SiRe_1107 PWY-5723 Rubisco shunt SiRe_1108 PWY-3081 L-lysine biosynthesis V SiRe_1108 PWY-6871 3-methylbutanol biosynthesis SiRe_1132 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation SiRe_1133 PWY-7285 methylwyosine biosynthesis SiRe_1133 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis SiRe_1134 PWY-6167 flavin biosynthesis II (archaea) SiRe_1136 PWY-6482 diphthamide biosynthesis (archaea) SiRe_1146 PWY-6829 tRNA methylation (yeast) SiRe_1156 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III SiRe_1156 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I SiRe_1156 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV SiRe_1156 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP SiRe_1156 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II SiRe_1156 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II SiRe_1156 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I SiRe_1156 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis SiRe_1171 PWY-1042 glycolysis IV (plant cytosol) SiRe_1171 PWY-1622 formaldehyde assimilation I (serine pathway) SiRe_1171 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) SiRe_1171 PWY-5484 glycolysis II (from fructose 6-phosphate) SiRe_1171 PWY-5723 Rubisco shunt SiRe_1171 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) SiRe_1171 PWY-6886 1-butanol autotrophic biosynthesis SiRe_1171 PWY-6901 superpathway of glucose and xylose degradation SiRe_1171 PWY-7003 glycerol degradation to butanol SiRe_1171 PWY-7124 ethylene biosynthesis V (engineered) SiRe_1171 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) SiRe_1178 PWY-6832 2-aminoethylphosphonate degradation II SiRe_1190 PWY-5958 acridone alkaloid biosynthesis SiRe_1190 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis SiRe_1190 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis SiRe_1191 PWY-5958 acridone alkaloid biosynthesis SiRe_1191 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis SiRe_1191 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis SiRe_1197 PWY-2301 myo-inositol biosynthesis SiRe_1197 PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) SiRe_1197 PWY-6372 1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium) SiRe_1197 PWY-6580 phosphatidylinositol biosynthesis I (bacteria) SiRe_1197 PWY-6664 di-myo-inositol phosphate biosynthesis SiRe_1199 PWY-5484 glycolysis II (from fructose 6-phosphate) SiRe_1204 PWY-2941 L-lysine biosynthesis II SiRe_1204 PWY-2942 L-lysine biosynthesis III SiRe_1204 PWY-5097 L-lysine biosynthesis VI SiRe_1204 PWY-6559 spermidine biosynthesis II SiRe_1204 PWY-6562 norspermidine biosynthesis SiRe_1204 PWY-7153 grixazone biosynthesis SiRe_1205 PWY-2941 L-lysine biosynthesis II SiRe_1205 PWY-2942 L-lysine biosynthesis III SiRe_1205 PWY-5097 L-lysine biosynthesis VI SiRe_1205 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) SiRe_1205 PWY-6559 spermidine biosynthesis II SiRe_1205 PWY-6562 norspermidine biosynthesis SiRe_1205 PWY-7153 grixazone biosynthesis SiRe_1205 PWY-7400 L-arginine biosynthesis IV (archaebacteria) SiRe_1208 PWY-4981 L-proline biosynthesis II (from arginine) SiRe_1208 PWY-4984 urea cycle SiRe_1208 PWY-7400 L-arginine biosynthesis IV (archaebacteria) SiRe_1210 PWY-5083 NAD/NADH phosphorylation and dephosphorylation SiRe_1210 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) SiRe_1210 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) SiRe_1221 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III SiRe_1221 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I SiRe_1221 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II SiRe_1221 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation SiRe_1221 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV SiRe_1221 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP SiRe_1238 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation SiRe_1249 PWY-6349 CDP-archaeol biosynthesis SiRe_1254 PWY-5041 S-adenosyl-L-methionine cycle II SiRe_1265 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II SiRe_1312 PWY-7219 adenosine ribonucleotides de novo biosynthesis SiRe_1315 PWY-7205 CMP phosphorylation SiRe_1336 PWY-6482 diphthamide biosynthesis (archaea) SiRe_1336 PWY-7546 diphthamide biosynthesis (eukaryotes) SiRe_1338 PWY-6823 molybdenum cofactor biosynthesis SiRe_1350 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) SiRe_1350 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) SiRe_1366 PWY-1361 benzoyl-CoA degradation I (aerobic) SiRe_1366 PWY-5109 2-methylbutanoate biosynthesis SiRe_1366 PWY-5136 fatty acid β-oxidation II (peroxisome) SiRe_1366 PWY-5138 unsaturated, even numbered fatty acid β-oxidation SiRe_1366 PWY-5177 glutaryl-CoA degradation SiRe_1366 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle SiRe_1366 PWY-6435 4-hydroxybenzoate biosynthesis V SiRe_1366 PWY-6583 pyruvate fermentation to butanol I SiRe_1366 PWY-6863 pyruvate fermentation to hexanol SiRe_1366 PWY-6883 pyruvate fermentation to butanol II SiRe_1366 PWY-6944 androstenedione degradation SiRe_1366 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) SiRe_1366 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) SiRe_1366 PWY-7007 methyl ketone biosynthesis SiRe_1366 PWY-7046 4-coumarate degradation (anaerobic) SiRe_1366 PWY-7094 fatty acid salvage SiRe_1366 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis SiRe_1366 PWY-735 jasmonic acid biosynthesis SiRe_1366 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) SiRe_1369 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) SiRe_1369 PWY-5686 UMP biosynthesis SiRe_1369 PWY-7400 L-arginine biosynthesis IV (archaebacteria) SiRe_1370 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) SiRe_1370 PWY-5686 UMP biosynthesis SiRe_1370 PWY-7400 L-arginine biosynthesis IV (archaebacteria) SiRe_1371 PWY-4983 L-citrulline-nitric oxide cycle SiRe_1371 PWY-4984 urea cycle SiRe_1371 PWY-5 canavanine biosynthesis SiRe_1371 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) SiRe_1371 PWY-7400 L-arginine biosynthesis IV (archaebacteria) SiRe_1372 PWY-4983 L-citrulline-nitric oxide cycle SiRe_1372 PWY-4984 urea cycle SiRe_1372 PWY-5 canavanine biosynthesis SiRe_1372 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) SiRe_1372 PWY-7400 L-arginine biosynthesis IV (archaebacteria) SiRe_1375 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I SiRe_1375 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II SiRe_1375 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis SiRe_1376 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I SiRe_1376 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II SiRe_1376 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis SiRe_1378 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I SiRe_1378 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II SiRe_1378 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis SiRe_1378 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) SiRe_1379 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I SiRe_1379 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II SiRe_1379 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis SiRe_1380 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I SiRe_1380 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II SiRe_1380 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis SiRe_1381 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I SiRe_1381 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II SiRe_1381 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis SiRe_1382 PWY-6123 inosine-5'-phosphate biosynthesis I SiRe_1382 PWY-6124 inosine-5'-phosphate biosynthesis II SiRe_1382 PWY-7234 inosine-5'-phosphate biosynthesis III SiRe_1385 PWY-6703 preQ0 biosynthesis SiRe_1391 PWY-5686 UMP biosynthesis SiRe_1392 PWY-5686 UMP biosynthesis SiRe_1393 PWY-5686 UMP biosynthesis SiRe_1396 PWY-5686 UMP biosynthesis SiRe_1405 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) SiRe_1418 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II SiRe_1418 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I SiRe_1418 PWY-6268 adenosylcobalamin salvage from cobalamin SiRe_1418 PWY-6269 adenosylcobalamin salvage from cobinamide II SiRe_1421 PWY-6834 spermidine biosynthesis III SiRe_1424 PWY-6349 CDP-archaeol biosynthesis SiRe_1428 PWY-5101 L-isoleucine biosynthesis II SiRe_1428 PWY-5103 L-isoleucine biosynthesis III SiRe_1428 PWY-5104 L-isoleucine biosynthesis IV SiRe_1428 PWY-5938 (R)-acetoin biosynthesis I SiRe_1428 PWY-5939 (R)-acetoin biosynthesis II SiRe_1428 PWY-6389 (S)-acetoin biosynthesis SiRe_1428 PWY-7111 pyruvate fermentation to isobutanol (engineered) SiRe_1430 PWY-5101 L-isoleucine biosynthesis II SiRe_1430 PWY-5103 L-isoleucine biosynthesis III SiRe_1430 PWY-5104 L-isoleucine biosynthesis IV SiRe_1430 PWY-7111 pyruvate fermentation to isobutanol (engineered) SiRe_1433 PWY-6466 pyridoxal 5'-phosphate biosynthesis II SiRe_1434 PWY-6466 pyridoxal 5'-phosphate biosynthesis II SiRe_1438 PWY-7219 adenosine ribonucleotides de novo biosynthesis SiRe_1440 PWY-7219 adenosine ribonucleotides de novo biosynthesis SiRe_1441 PWY-7219 adenosine ribonucleotides de novo biosynthesis SiRe_1455 PWY-1042 glycolysis IV (plant cytosol) SiRe_1455 PWY-5484 glycolysis II (from fructose 6-phosphate) SiRe_1455 PWY-6886 1-butanol autotrophic biosynthesis SiRe_1455 PWY-6901 superpathway of glucose and xylose degradation SiRe_1455 PWY-7003 glycerol degradation to butanol SiRe_1458 PWY-1622 formaldehyde assimilation I (serine pathway) SiRe_1458 PWY-181 photorespiration SiRe_1458 PWY-2161 folate polyglutamylation SiRe_1458 PWY-2201 folate transformations I SiRe_1458 PWY-3661 glycine betaine degradation I SiRe_1458 PWY-3661-1 glycine betaine degradation II (mammalian) SiRe_1458 PWY-3841 folate transformations II SiRe_1458 PWY-5497 purine nucleobases degradation II (anaerobic) SiRe_1459 PWY-6174 mevalonate pathway II (archaea) SiRe_1459 PWY-7391 isoprene biosynthesis II (engineered) SiRe_1459 PWY-7524 mevalonate pathway III (archaea) SiRe_1459 PWY-922 mevalonate pathway I SiRe_1462 PWY-4381 fatty acid biosynthesis initiation I SiRe_1463 PWY-40 putrescine biosynthesis I SiRe_1463 PWY-43 putrescine biosynthesis II SiRe_1463 PWY-6305 putrescine biosynthesis IV SiRe_1463 PWY-6834 spermidine biosynthesis III SiRe_1510 PWY-3341 L-proline biosynthesis III SiRe_1510 PWY-4981 L-proline biosynthesis II (from arginine) SiRe_1510 PWY-6344 L-ornithine degradation II (Stickland reaction) SiRe_1532 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) SiRe_1532 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) SiRe_1532 PWY-6897 thiamin salvage II SiRe_1532 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) SiRe_1532 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) SiRe_1532 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) SiRe_1532 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) SiRe_1540 PWY-7219 adenosine ribonucleotides de novo biosynthesis SiRe_1558 PWY-40 putrescine biosynthesis I SiRe_1558 PWY-6305 putrescine biosynthesis IV SiRe_1563 PWY-6689 tRNA splicing SiRe_1566 PWY-5532 adenosine nucleotides degradation IV SiRe_1571 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation SiRe_1576 PWY-6829 tRNA methylation (yeast) SiRe_1583 PWY-1042 glycolysis IV (plant cytosol) SiRe_1583 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) SiRe_1583 PWY-5484 glycolysis II (from fructose 6-phosphate) SiRe_1583 PWY-5723 Rubisco shunt SiRe_1583 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) SiRe_1583 PWY-6886 1-butanol autotrophic biosynthesis SiRe_1583 PWY-6901 superpathway of glucose and xylose degradation SiRe_1583 PWY-7003 glycerol degradation to butanol SiRe_1583 PWY-7124 ethylene biosynthesis V (engineered) SiRe_1583 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) SiRe_1590 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) SiRe_1592 PWY-5041 S-adenosyl-L-methionine cycle II SiRe_1592 PWY-6151 S-adenosyl-L-methionine cycle I SiRe_1592 PWY-6936 seleno-amino acid biosynthesis SiRe_1592 PWY-702 L-methionine biosynthesis II SiRe_1593 PWY-5041 S-adenosyl-L-methionine cycle II SiRe_1593 PWY-6151 S-adenosyl-L-methionine cycle I SiRe_1593 PWY-6936 seleno-amino acid biosynthesis SiRe_1593 PWY-702 L-methionine biosynthesis II SiRe_1597 PWY-6167 flavin biosynthesis II (archaea) SiRe_1597 PWY-6168 flavin biosynthesis III (fungi) SiRe_1598 PWY-6167 flavin biosynthesis II (archaea) SiRe_1598 PWY-6168 flavin biosynthesis III (fungi) SiRe_1599 PWY-6167 flavin biosynthesis II (archaea) SiRe_1599 PWY-6168 flavin biosynthesis III (fungi) SiRe_1600 PWY-6167 flavin biosynthesis II (archaea) SiRe_1618 PWY-3821 galactose degradation III SiRe_1618 PWY-6174 mevalonate pathway II (archaea) SiRe_1618 PWY-6317 galactose degradation I (Leloir pathway) SiRe_1618 PWY-6527 stachyose degradation SiRe_1618 PWY-7391 isoprene biosynthesis II (engineered) SiRe_1618 PWY-922 mevalonate pathway I SiRe_1619 PWY-6749 CMP-legionaminate biosynthesis I SiRe_1623 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II SiRe_1623 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I SiRe_1623 PWY-6268 adenosylcobalamin salvage from cobalamin SiRe_1623 PWY-6269 adenosylcobalamin salvage from cobinamide II SiRe_1626 PWY-6823 molybdenum cofactor biosynthesis SiRe_1629 PWY-6148 tetrahydromethanopterin biosynthesis SiRe_1633 PWY-381 nitrate reduction II (assimilatory) SiRe_1633 PWY-5675 nitrate reduction V (assimilatory) SiRe_1633 PWY-6549 L-glutamine biosynthesis III SiRe_1633 PWY-6963 ammonia assimilation cycle I SiRe_1633 PWY-6964 ammonia assimilation cycle II SiRe_1635 PWY-5663 tetrahydrobiopterin biosynthesis I SiRe_1635 PWY-5664 tetrahydrobiopterin biosynthesis II SiRe_1635 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I SiRe_1635 PWY-6703 preQ0 biosynthesis SiRe_1635 PWY-6983 tetrahydrobiopterin biosynthesis III SiRe_1635 PWY-7442 drosopterin and aurodrosopterin biosynthesis SiRe_1637 PWY-6823 molybdenum cofactor biosynthesis SiRe_1646 PWY-5381 pyridine nucleotide cycling (plants) SiRe_1666 PWY-2301 myo-inositol biosynthesis SiRe_1666 PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) SiRe_1666 PWY-6372 1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium) SiRe_1666 PWY-6580 phosphatidylinositol biosynthesis I (bacteria) SiRe_1666 PWY-6664 di-myo-inositol phosphate biosynthesis SiRe_1676 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III SiRe_1681 PWY-6854 ethylene biosynthesis III (microbes) SiRe_1688 PWY-6163 chorismate biosynthesis from 3-dehydroquinate SiRe_1688 PWY-6416 quinate degradation II SiRe_1688 PWY-6707 gallate biosynthesis SiRe_1689 PWY-6163 chorismate biosynthesis from 3-dehydroquinate SiRe_1690 PWY-6163 chorismate biosynthesis from 3-dehydroquinate SiRe_1691 PWY-6163 chorismate biosynthesis from 3-dehydroquinate SiRe_1692 PWY-6163 chorismate biosynthesis from 3-dehydroquinate SiRe_1693 PWY-6164 3-dehydroquinate biosynthesis I SiRe_1694 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I SiRe_1694 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) SiRe_1694 PWY-6164 3-dehydroquinate biosynthesis I SiRe_1695 PWY-3461 L-tyrosine biosynthesis II SiRe_1695 PWY-3462 L-phenylalanine biosynthesis II SiRe_1695 PWY-6120 L-tyrosine biosynthesis III SiRe_1695 PWY-6627 salinosporamide A biosynthesis SiRe_1695 PWY-7303 3-dimethylallyl-4-hydroxybenzoate biosynthesis SiRe_1698 PWY-6891 thiazole biosynthesis II (Bacillus) SiRe_1698 PWY-6892 thiazole biosynthesis I (E. coli) SiRe_1698 PWY-7560 methylerythritol phosphate pathway II SiRe_1703 PWY-6482 diphthamide biosynthesis (archaea) SiRe_1703 PWY-7546 diphthamide biosynthesis (eukaryotes) SiRe_1718 PWY-6689 tRNA splicing SiRe_1723 PWY-6700 queuosine biosynthesis SiRe_1723 PWY-6711 archaeosine biosynthesis SiRe_1725 PWY-6711 archaeosine biosynthesis SiRe_1736 PWY-6349 CDP-archaeol biosynthesis SiRe_1750 PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) SiRe_1753 PWY-7219 adenosine ribonucleotides de novo biosynthesis SiRe_1754 PWY-7234 inosine-5'-phosphate biosynthesis III SiRe_1755 PWY-6123 inosine-5'-phosphate biosynthesis I SiRe_1755 PWY-6124 inosine-5'-phosphate biosynthesis II SiRe_1755 PWY-7219 adenosine ribonucleotides de novo biosynthesis SiRe_1755 PWY-7234 inosine-5'-phosphate biosynthesis III SiRe_1756 PWY-7234 inosine-5'-phosphate biosynthesis III SiRe_1757 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) SiRe_1757 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) SiRe_1757 PWY-6896 thiamin salvage I SiRe_1757 PWY-6897 thiamin salvage II SiRe_1758 PWY-6823 molybdenum cofactor biosynthesis SiRe_1762 PWY-7183 pyrimidine nucleobases salvage I SiRe_1765 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III SiRe_1765 PWY-7176 UTP and CTP de novo biosynthesis SiRe_1765 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I SiRe_1765 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II SiRe_1765 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation SiRe_1765 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV SiRe_1765 PWY-7205 CMP phosphorylation SiRe_1765 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP SiRe_1765 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II SiRe_1765 PWY-7221 guanosine ribonucleotides de novo biosynthesis SiRe_1765 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II SiRe_1765 PWY-7224 purine deoxyribonucleosides salvage SiRe_1765 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I SiRe_1765 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis SiRe_1782 PWY-5796 malonate decarboxylase activation SiRe_1800 PWY-6749 CMP-legionaminate biosynthesis I SiRe_1804 PWY-5686 UMP biosynthesis SiRe_1805 PWY-7176 UTP and CTP de novo biosynthesis SiRe_1805 PWY-7177 UTP and CTP dephosphorylation II SiRe_1805 PWY-7185 UTP and CTP dephosphorylation I SiRe_1808 PWY-5041 S-adenosyl-L-methionine cycle II SiRe_1808 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis SiRe_1817 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II SiRe_1824 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) SiRe_1824 PWY-5189 tetrapyrrole biosynthesis II (from glycine) SiRe_1825 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) SiRe_1825 PWY-5189 tetrapyrrole biosynthesis II (from glycine) SiRe_1826 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) SiRe_1827 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) SiRe_1827 PWY-5189 tetrapyrrole biosynthesis II (from glycine) SiRe_1828 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) SiRe_1829 PWY-5194 siroheme biosynthesis SiRe_1829 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) SiRe_1854 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) SiRe_1854 PWY-7400 L-arginine biosynthesis IV (archaebacteria) SiRe_1855 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) SiRe_1855 PWY-7400 L-arginine biosynthesis IV (archaebacteria) SiRe_1869 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) SiRe_1872 PWY-5101 L-isoleucine biosynthesis II SiRe_1872 PWY-6871 3-methylbutanol biosynthesis SiRe_1903 PWY-181 photorespiration SiRe_1904 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) SiRe_1917 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) SiRe_1917 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) SiRe_1917 PWY-6896 thiamin salvage I SiRe_1917 PWY-6897 thiamin salvage II SiRe_1929 PWY-6174 mevalonate pathway II (archaea) SiRe_1929 PWY-7524 mevalonate pathway III (archaea) SiRe_1930 PWY-5123 trans, trans-farnesyl diphosphate biosynthesis SiRe_1930 PWY-6174 mevalonate pathway II (archaea) SiRe_1930 PWY-6383 mono-trans, poly-cis decaprenyl phosphate biosynthesis SiRe_1930 PWY-6859 all-trans-farnesol biosynthesis SiRe_1930 PWY-7102 bisabolene biosynthesis SiRe_1930 PWY-7391 isoprene biosynthesis II (engineered) SiRe_1930 PWY-7524 mevalonate pathway III (archaea) SiRe_1930 PWY-7560 methylerythritol phosphate pathway II SiRe_1930 PWY-922 mevalonate pathway I SiRe_1932 PWY-5265 peptidoglycan biosynthesis II (staphylococci) SiRe_1932 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) SiRe_1932 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) SiRe_1954 PWY-3781 aerobic respiration I (cytochrome c) SiRe_1954 PWY-4521 arsenite oxidation I (respiratory) SiRe_1954 PWY-6692 Fe(II) oxidation SiRe_1954 PWY-7279 aerobic respiration II (cytochrome c) (yeast) SiRe_1955 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) SiRe_1955 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) SiRe_1955 PWY-6897 thiamin salvage II SiRe_1955 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) SiRe_1955 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) SiRe_1955 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) SiRe_1955 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) SiRe_1979 PWY-6703 preQ0 biosynthesis SiRe_1993 PWY-6910 hydroxymethylpyrimidine salvage SiRe_1993 PWY-7356 thiamin salvage IV (yeast) SiRe_1993 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) SiRe_2010 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II SiRe_2010 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I SiRe_2010 PWY-6269 adenosylcobalamin salvage from cobinamide II SiRe_2012 PWY-7221 guanosine ribonucleotides de novo biosynthesis SiRe_2021 PWY-4041 γ-glutamyl cycle SiRe_2021 PWY-5826 hypoglycin biosynthesis SiRe_2035 PWY-6672 cis-genanyl-CoA degradation SiRe_2035 PWY-7118 chitin degradation to ethanol SiRe_2088 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) SiRe_2088 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) SiRe_2089 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) SiRe_2089 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) SiRe_2091 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) SiRe_2091 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) SiRe_2092 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) SiRe_2092 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) SiRe_2092 PWY-7382 lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast) SiRe_2093 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) SiRe_2093 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) SiRe_2094 PWY-6785 hydrogen production VIII SiRe_2141 PWY-5101 L-isoleucine biosynthesis II SiRe_2141 PWY-5103 L-isoleucine biosynthesis III SiRe_2141 PWY-5104 L-isoleucine biosynthesis IV SiRe_2141 PWY-7111 pyruvate fermentation to isobutanol (engineered) SiRe_2153 PWY-5303 thiosulfate oxidation II (via tetrathionate) SiRe_2176 PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde SiRe_2176 PWY-6309 L-tryptophan degradation XI (mammalian, via kynurenine) SiRe_2206 PWY-6807 xyloglucan degradation II (exoglucanase) SiRe_2247 PWY-1361 benzoyl-CoA degradation I (aerobic) SiRe_2247 PWY-5109 2-methylbutanoate biosynthesis SiRe_2247 PWY-5136 fatty acid β-oxidation II (peroxisome) SiRe_2247 PWY-5138 unsaturated, even numbered fatty acid β-oxidation SiRe_2247 PWY-5177 glutaryl-CoA degradation SiRe_2247 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle SiRe_2247 PWY-6435 4-hydroxybenzoate biosynthesis V SiRe_2247 PWY-6583 pyruvate fermentation to butanol I SiRe_2247 PWY-6863 pyruvate fermentation to hexanol SiRe_2247 PWY-6883 pyruvate fermentation to butanol II SiRe_2247 PWY-6944 androstenedione degradation SiRe_2247 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) SiRe_2247 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) SiRe_2247 PWY-7007 methyl ketone biosynthesis SiRe_2247 PWY-7046 4-coumarate degradation (anaerobic) SiRe_2247 PWY-7094 fatty acid salvage SiRe_2247 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis SiRe_2247 PWY-735 jasmonic acid biosynthesis SiRe_2247 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) SiRe_2252 PWY-7391 isoprene biosynthesis II (engineered) SiRe_2252 PWY-922 mevalonate pathway I SiRe_2263 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation SiRe_2263 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II SiRe_2267 PWY-3781 aerobic respiration I (cytochrome c) SiRe_2267 PWY-4521 arsenite oxidation I (respiratory) SiRe_2267 PWY-6692 Fe(II) oxidation SiRe_2267 PWY-7279 aerobic respiration II (cytochrome c) (yeast) SiRe_2291 PWY-6823 molybdenum cofactor biosynthesis SiRe_2309 PWY-5278 sulfite oxidation III SiRe_2309 PWY-5340 sulfate activation for sulfonation SiRe_2309 PWY-6683 sulfate reduction III (assimilatory) SiRe_2309 PWY-6932 selenate reduction SiRe_2311 PWY-6683 sulfate reduction III (assimilatory) SiRe_2312 PWY-5194 siroheme biosynthesis SiRe_2312 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) SiRe_2313 PWY-5350 thiosulfate disproportionation III (rhodanese) SiRe_2330 PWY-1361 benzoyl-CoA degradation I (aerobic) SiRe_2330 PWY-5109 2-methylbutanoate biosynthesis SiRe_2330 PWY-5136 fatty acid β-oxidation II (peroxisome) SiRe_2330 PWY-5138 unsaturated, even numbered fatty acid β-oxidation SiRe_2330 PWY-5177 glutaryl-CoA degradation SiRe_2330 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle SiRe_2330 PWY-6435 4-hydroxybenzoate biosynthesis V SiRe_2330 PWY-6583 pyruvate fermentation to butanol I SiRe_2330 PWY-6863 pyruvate fermentation to hexanol SiRe_2330 PWY-6883 pyruvate fermentation to butanol II SiRe_2330 PWY-6944 androstenedione degradation SiRe_2330 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) SiRe_2330 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) SiRe_2330 PWY-7007 methyl ketone biosynthesis SiRe_2330 PWY-7046 4-coumarate degradation (anaerobic) SiRe_2330 PWY-7094 fatty acid salvage SiRe_2330 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis SiRe_2330 PWY-735 jasmonic acid biosynthesis SiRe_2330 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) SiRe_2336 PWY-6185 4-methylcatechol degradation (ortho cleavage) SiRe_2338 PWY-6672 cis-genanyl-CoA degradation SiRe_2338 PWY-7118 chitin degradation to ethanol SiRe_2353 PWY-6167 flavin biosynthesis II (archaea) SiRe_2355 PWY-40 putrescine biosynthesis I SiRe_2355 PWY-6305 putrescine biosynthesis IV SiRe_2359 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type SiRe_2359 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) SiRe_2359 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type SiRe_2359 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type SiRe_2464 PWY-1881 formate oxidation to CO2 SiRe_2464 PWY-5497 purine nucleobases degradation II (anaerobic) SiRe_2464 PWY-6696 oxalate degradation III SiRe_2492 PWY-4202 arsenate detoxification I (glutaredoxin) SiRe_2492 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation SiRe_2492 PWY-6608 guanosine nucleotides degradation III SiRe_2492 PWY-6609 adenine and adenosine salvage III SiRe_2492 PWY-6611 adenine and adenosine salvage V SiRe_2492 PWY-6620 guanine and guanosine salvage SiRe_2492 PWY-6627 salinosporamide A biosynthesis SiRe_2492 PWY-6644 fluoroacetate and fluorothreonine biosynthesis SiRe_2492 PWY-7179 purine deoxyribonucleosides degradation I SiRe_2492 PWY-7179-1 purine deoxyribonucleosides degradation SiRe_2525 PWY-6703 preQ0 biosynthesis SiRe_2533 PWY-6906 chitin derivatives degradation SiRe_2533 PWY-7077 N-acetyl-D-galactosamine degradation SiRe_2533 PWY-7395 D-galactosamine and N-acetyl-D-galactosamine degradation SiRe_2549 PWY-3781 aerobic respiration I (cytochrome c) SiRe_2549 PWY-4521 arsenite oxidation I (respiratory) SiRe_2549 PWY-6692 Fe(II) oxidation SiRe_2549 PWY-7279 aerobic respiration II (cytochrome c) (yeast) SiRe_2578 PWY-1341 phenylacetate degradation II (anaerobic) SiRe_2578 PWY-6318 L-phenylalanine degradation IV (mammalian, via side chain) SiRe_2608 PWY-6899 base-degraded thiamin salvage SiRe_2608 PWY-7356 thiamin salvage IV (yeast) SiRe_2609 PWY-6832 2-aminoethylphosphonate degradation II SiRe_2615 PWY-1042 glycolysis IV (plant cytosol) SiRe_2615 PWY-5484 glycolysis II (from fructose 6-phosphate) SiRe_2615 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) SiRe_2615 PWY-6891 thiazole biosynthesis II (Bacillus) SiRe_2615 PWY-6892 thiazole biosynthesis I (E. coli) SiRe_2615 PWY-7003 glycerol degradation to butanol SiRe_2620 PWY-5747 2-methylcitrate cycle II SiRe_2639 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II SiRe_2639 PWY-5523 5,6-dimethylbenzimidazole biosynthesis SiRe_2644 PWY-381 nitrate reduction II (assimilatory) SiRe_2644 PWY-5675 nitrate reduction V (assimilatory) SiRe_2644 PWY-6549 L-glutamine biosynthesis III SiRe_2644 PWY-6963 ammonia assimilation cycle I SiRe_2644 PWY-6964 ammonia assimilation cycle II SiRe_2667 PWY-181 photorespiration SiRe_2673 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) SiRe_2673 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) SiRe_2683 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III SiRe_2683 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I SiRe_2683 PWY-7185 UTP and CTP dephosphorylation I SiRe_2683 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV SiRe_2683 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP SiRe_2691 PWY-2941 L-lysine biosynthesis II SiRe_2691 PWY-2942 L-lysine biosynthesis III SiRe_2691 PWY-5097 L-lysine biosynthesis VI SiRe_2691 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) SiRe_2691 PWY-6559 spermidine biosynthesis II SiRe_2691 PWY-6562 norspermidine biosynthesis SiRe_2691 PWY-7153 grixazone biosynthesis SiRe_2691 PWY-7400 L-arginine biosynthesis IV (archaebacteria)