SSO0002	PWY-6910	hydroxymethylpyrimidine salvage
SSO0002	PWY-7356	thiamin salvage IV (yeast)
SSO0002	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
SSO0016	PWY-6703	preQ<sub>0</sub> biosynthesis
SSO0039	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
SSO0039	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
SSO0039	PWY-6897	thiamin salvage II
SSO0039	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
SSO0039	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
SSO0039	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
SSO0039	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
SSO0044	PWY-3781	aerobic respiration I (cytochrome c)
SSO0044	PWY-4521	arsenite oxidation I (respiratory)
SSO0044	PWY-6692	Fe(II) oxidation
SSO0044	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SSO0060	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SSO0060	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
SSO0060	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SSO0063	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
SSO0063	PWY-6174	mevalonate pathway II (archaea)
SSO0063	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
SSO0063	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
SSO0063	PWY-7102	bisabolene biosynthesis
SSO0063	PWY-7391	isoprene biosynthesis II (engineered)
SSO0063	PWY-7524	mevalonate pathway III (archaea)
SSO0063	PWY-7560	methylerythritol phosphate pathway II
SSO0063	PWY-922	mevalonate pathway I
SSO0064	PWY-6174	mevalonate pathway II (archaea)
SSO0064	PWY-7524	mevalonate pathway III (archaea)
SSO0076	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
SSO0076	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
SSO0076	PWY-6896	thiamin salvage I
SSO0076	PWY-6897	thiamin salvage II
SSO0093	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SSO0094	PWY-181	photorespiration
SSO0127	PWY-5101	L-isoleucine biosynthesis II
SSO0127	PWY-6871	3-methylbutanol biosynthesis
SSO0129	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SSO0155	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SSO0155	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SSO0156	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SSO0156	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SSO0180	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SSO0181	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SSO0181	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
SSO0182	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SSO0183	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SSO0183	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
SSO0184	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SSO0184	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
SSO0190	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
SSO0199	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
SSO0199	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
SSO0201	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
SSO0201	PWY-7177	UTP and CTP dephosphorylation II
SSO0201	PWY-7185	UTP and CTP dephosphorylation I
SSO0202	PWY-5686	UMP biosynthesis
SSO0207	PWY-6749	CMP-legionaminate biosynthesis I
SSO0212	PWY-5796	malonate decarboxylase activation
SSO0230	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SSO0230	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
SSO0230	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SSO0230	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
SSO0230	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
SSO0230	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SSO0230	PWY-7205	CMP phosphorylation
SSO0230	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SSO0230	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SSO0230	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
SSO0230	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SSO0230	PWY-7224	purine deoxyribonucleosides salvage
SSO0230	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
SSO0230	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
SSO0231	PWY-7183	pyrimidine nucleobases salvage I
SSO0235	PWY-6823	molybdenum cofactor biosynthesis
SSO0237	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
SSO0237	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
SSO0237	PWY-6896	thiamin salvage I
SSO0237	PWY-6897	thiamin salvage II
SSO0239	PWY-7234	inosine-5'-phosphate biosynthesis III
SSO0240	PWY-6123	inosine-5'-phosphate biosynthesis I
SSO0240	PWY-6124	inosine-5'-phosphate biosynthesis II
SSO0240	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SSO0240	PWY-7234	inosine-5'-phosphate biosynthesis III
SSO0241	PWY-7234	inosine-5'-phosphate biosynthesis III
SSO0242	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SSO0246	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
SSO0259	PWY-6349	CDP-archaeol biosynthesis
SSO0274	PWY-6700	queuosine biosynthesis
SSO0274	PWY-6711	archaeosine biosynthesis
SSO0281	PWY-6689	tRNA splicing
SSO0293	PWY-6482	diphthamide biosynthesis (archaea)
SSO0293	PWY-7546	diphthamide biosynthesis (eukaryotes)
SSO0297	PWY-6891	thiazole biosynthesis II (Bacillus)
SSO0297	PWY-6892	thiazole biosynthesis I (E. coli)
SSO0297	PWY-7560	methylerythritol phosphate pathway II
SSO0302	PWY-3461	L-tyrosine biosynthesis II
SSO0302	PWY-3462	L-phenylalanine biosynthesis II
SSO0302	PWY-6120	L-tyrosine biosynthesis III
SSO0302	PWY-6627	salinosporamide A biosynthesis
SSO0302	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
SSO0304	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
SSO0304	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
SSO0304	PWY-6164	3-dehydroquinate biosynthesis I
SSO0305	PWY-6164	3-dehydroquinate biosynthesis I
SSO0306	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SSO0307	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SSO0308	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SSO0309	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SSO0311	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SSO0311	PWY-6416	quinate degradation II
SSO0311	PWY-6707	gallate biosynthesis
SSO0316	PWY-6854	ethylene biosynthesis III (microbes)
SSO0321	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SSO0330	PWY-2301	<i>myo</i>-inositol biosynthesis
SSO0330	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
SSO0330	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
SSO0330	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
SSO0330	PWY-6664	di-myo-inositol phosphate biosynthesis
SSO0354	PWY-5381	pyridine nucleotide cycling (plants)
SSO0362	PWY-6823	molybdenum cofactor biosynthesis
SSO0364	PWY-5663	tetrahydrobiopterin biosynthesis I
SSO0364	PWY-5664	tetrahydrobiopterin biosynthesis II
SSO0364	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
SSO0364	PWY-6703	preQ<sub>0</sub> biosynthesis
SSO0364	PWY-6983	tetrahydrobiopterin biosynthesis III
SSO0364	PWY-7442	drosopterin and aurodrosopterin biosynthesis
SSO0366	PWY-381	nitrate reduction II (assimilatory)
SSO0366	PWY-5675	nitrate reduction V (assimilatory)
SSO0366	PWY-6549	L-glutamine biosynthesis III
SSO0366	PWY-6963	ammonia assimilation cycle I
SSO0366	PWY-6964	ammonia assimilation cycle II
SSO0370	PWY-6148	tetrahydromethanopterin biosynthesis
SSO0373	PWY-6823	molybdenum cofactor biosynthesis
SSO0377	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
SSO0377	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
SSO0377	PWY-6268	adenosylcobalamin salvage from cobalamin
SSO0377	PWY-6269	adenosylcobalamin salvage from cobinamide II
SSO0382	PWY-6749	CMP-legionaminate biosynthesis I
SSO0383	PWY-3821	galactose degradation III
SSO0383	PWY-6174	mevalonate pathway II (archaea)
SSO0383	PWY-6317	galactose degradation I (Leloir pathway)
SSO0383	PWY-6527	stachyose degradation
SSO0383	PWY-7391	isoprene biosynthesis II (engineered)
SSO0383	PWY-922	mevalonate pathway I
SSO0399	PWY-6167	flavin biosynthesis II (archaea)
SSO0400	PWY-6167	flavin biosynthesis II (archaea)
SSO0400	PWY-6168	flavin biosynthesis III (fungi)
SSO0401	PWY-6167	flavin biosynthesis II (archaea)
SSO0401	PWY-6168	flavin biosynthesis III (fungi)
SSO0402	PWY-6167	flavin biosynthesis II (archaea)
SSO0402	PWY-6168	flavin biosynthesis III (fungi)
SSO0406	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
SSO0406	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
SSO0406	PWY-6936	seleno-amino acid biosynthesis
SSO0406	PWY-702	L-methionine biosynthesis II
SSO0407	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
SSO0407	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
SSO0407	PWY-6936	seleno-amino acid biosynthesis
SSO0407	PWY-702	L-methionine biosynthesis II
SSO0410	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SSO0417	PWY-1042	glycolysis IV (plant cytosol)
SSO0417	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
SSO0417	PWY-5484	glycolysis II (from fructose 6-phosphate)
SSO0417	PWY-5723	Rubisco shunt
SSO0417	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SSO0417	PWY-6886	1-butanol autotrophic biosynthesis
SSO0417	PWY-6901	superpathway of glucose and xylose degradation
SSO0417	PWY-7003	glycerol degradation to butanol
SSO0417	PWY-7124	ethylene biosynthesis V (engineered)
SSO0417	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
SSO0427	PWY-6829	tRNA methylation (yeast)
SSO0432	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
SSO0436	PWY-5532	adenosine nucleotides degradation IV
SSO0439	PWY-6689	tRNA splicing
SSO0445	PWY-40	putrescine biosynthesis I
SSO0445	PWY-6305	putrescine biosynthesis IV
SSO0461	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SSO0468	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
SSO0468	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
SSO0468	PWY-6897	thiamin salvage II
SSO0468	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
SSO0468	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
SSO0468	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
SSO0468	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
SSO0495	PWY-3341	L-proline biosynthesis III
SSO0495	PWY-4981	L-proline biosynthesis II (from arginine)
SSO0495	PWY-6344	L-ornithine degradation II (Stickland reaction)
SSO0527	PWY-1042	glycolysis IV (plant cytosol)
SSO0527	PWY-5484	glycolysis II (from fructose 6-phosphate)
SSO0527	PWY-6886	1-butanol autotrophic biosynthesis
SSO0527	PWY-6901	superpathway of glucose and xylose degradation
SSO0527	PWY-7003	glycerol degradation to butanol
SSO0530	PWY-1622	formaldehyde assimilation I (serine pathway)
SSO0530	PWY-181	photorespiration
SSO0530	PWY-2161	folate polyglutamylation
SSO0530	PWY-2201	folate transformations I
SSO0530	PWY-3661	glycine betaine degradation I
SSO0530	PWY-3661-1	glycine betaine degradation II (mammalian)
SSO0530	PWY-3841	folate transformations II
SSO0530	PWY-5497	purine nucleobases degradation II (anaerobic)
SSO0531	PWY-6174	mevalonate pathway II (archaea)
SSO0531	PWY-7391	isoprene biosynthesis II (engineered)
SSO0531	PWY-7524	mevalonate pathway III (archaea)
SSO0531	PWY-922	mevalonate pathway I
SSO0535	PWY-4381	fatty acid biosynthesis initiation I
SSO0536	PWY-40	putrescine biosynthesis I
SSO0536	PWY-43	putrescine biosynthesis II
SSO0536	PWY-6305	putrescine biosynthesis IV
SSO0536	PWY-6834	spermidine biosynthesis III
SSO0544	PWY-6703	preQ<sub>0</sub> biosynthesis
SSO0563	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SSO0564	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SSO0570	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
SSO0571	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
SSO0576	PWY-5101	L-isoleucine biosynthesis II
SSO0576	PWY-5103	L-isoleucine biosynthesis III
SSO0576	PWY-5104	L-isoleucine biosynthesis IV
SSO0576	PWY-7111	pyruvate fermentation to isobutanol (engineered)
SSO0579	PWY-5101	L-isoleucine biosynthesis II
SSO0579	PWY-5103	L-isoleucine biosynthesis III
SSO0579	PWY-5104	L-isoleucine biosynthesis IV
SSO0579	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
SSO0579	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
SSO0579	PWY-6389	(<i>S</i>)-acetoin biosynthesis
SSO0579	PWY-7111	pyruvate fermentation to isobutanol (engineered)
SSO0583	PWY-6349	CDP-archaeol biosynthesis
SSO0585	PWY-6834	spermidine biosynthesis III
SSO0588	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
SSO0588	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
SSO0588	PWY-6268	adenosylcobalamin salvage from cobalamin
SSO0588	PWY-6269	adenosylcobalamin salvage from cobinamide II
SSO0602	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
SSO0611	PWY-5686	UMP biosynthesis
SSO0614	PWY-5686	UMP biosynthesis
SSO0615	PWY-5686	UMP biosynthesis
SSO0616	PWY-5686	UMP biosynthesis
SSO0622	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
SSO0624	PWY-6703	preQ<sub>0</sub> biosynthesis
SSO0626	PWY-6123	inosine-5'-phosphate biosynthesis I
SSO0626	PWY-6124	inosine-5'-phosphate biosynthesis II
SSO0626	PWY-7234	inosine-5'-phosphate biosynthesis III
SSO0628	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SSO0628	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SSO0628	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SSO0629	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SSO0629	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SSO0629	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SSO0632	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SSO0632	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SSO0632	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SSO0632	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SSO0635	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SSO0635	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SSO0635	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SSO0636	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SSO0636	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SSO0636	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SSO0638	PWY-4983	L-citrulline-nitric oxide cycle
SSO0638	PWY-4984	urea cycle
SSO0638	PWY-5	canavanine biosynthesis
SSO0638	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SSO0638	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SSO0639	PWY-4983	L-citrulline-nitric oxide cycle
SSO0639	PWY-4984	urea cycle
SSO0639	PWY-5	canavanine biosynthesis
SSO0639	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SSO0639	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SSO0640	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SSO0640	PWY-5686	UMP biosynthesis
SSO0640	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SSO0641	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SSO0641	PWY-5686	UMP biosynthesis
SSO0641	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SSO0647	PWY-1361	benzoyl-CoA degradation I (aerobic)
SSO0647	PWY-5109	2-methylbutanoate biosynthesis
SSO0647	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
SSO0647	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
SSO0647	PWY-5177	glutaryl-CoA degradation
SSO0647	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SSO0647	PWY-6435	4-hydroxybenzoate biosynthesis V
SSO0647	PWY-6583	pyruvate fermentation to butanol I
SSO0647	PWY-6863	pyruvate fermentation to hexanol
SSO0647	PWY-6883	pyruvate fermentation to butanol II
SSO0647	PWY-6944	androstenedione degradation
SSO0647	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
SSO0647	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
SSO0647	PWY-7007	methyl ketone biosynthesis
SSO0647	PWY-7046	4-coumarate degradation (anaerobic)
SSO0647	PWY-7094	fatty acid salvage
SSO0647	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
SSO0647	PWY-735	jasmonic acid biosynthesis
SSO0647	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
SSO0662	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
SSO0662	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
SSO0676	PWY-6823	molybdenum cofactor biosynthesis
SSO0678	PWY-6482	diphthamide biosynthesis (archaea)
SSO0678	PWY-7546	diphthamide biosynthesis (eukaryotes)
SSO0692	PWY-7205	CMP phosphorylation
SSO0694	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SSO0745	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
SSO0755	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
SSO0760	PWY-6349	CDP-archaeol biosynthesis
SSO0765	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
SSO0780	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SSO0780	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SSO0780	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
SSO0780	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
SSO0780	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SSO0780	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SSO0788	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SSO0788	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SSO0810	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
SSO0830	PWY-3221	dTDP-L-rhamnose biosynthesis II
SSO0830	PWY-6808	dTDP-D-forosamine biosynthesis
SSO0830	PWY-6942	dTDP-D-desosamine biosynthesis
SSO0830	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
SSO0830	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
SSO0830	PWY-6974	dTDP-L-olivose biosynthesis
SSO0830	PWY-6976	dTDP-L-mycarose biosynthesis
SSO0830	PWY-7104	dTDP-L-megosamine biosynthesis
SSO0830	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
SSO0830	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
SSO0830	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
SSO0830	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
SSO0830	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
SSO0830	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
SSO0830	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
SSO0830	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
SSO0869	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
SSO0869	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
SSO0869	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
SSO0871	PWY-4981	L-proline biosynthesis II (from arginine)
SSO0871	PWY-4984	urea cycle
SSO0871	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SSO0874	PWY-2941	L-lysine biosynthesis II
SSO0874	PWY-2942	L-lysine biosynthesis III
SSO0874	PWY-5097	L-lysine biosynthesis VI
SSO0874	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SSO0874	PWY-6559	spermidine biosynthesis II
SSO0874	PWY-6562	norspermidine biosynthesis
SSO0874	PWY-7153	grixazone biosynthesis
SSO0874	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SSO0876	PWY-2941	L-lysine biosynthesis II
SSO0876	PWY-2942	L-lysine biosynthesis III
SSO0876	PWY-5097	L-lysine biosynthesis VI
SSO0876	PWY-6559	spermidine biosynthesis II
SSO0876	PWY-6562	norspermidine biosynthesis
SSO0876	PWY-7153	grixazone biosynthesis
SSO0883	PWY-5484	glycolysis II (from fructose 6-phosphate)
SSO0886	PWY-2301	<i>myo</i>-inositol biosynthesis
SSO0886	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
SSO0886	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
SSO0886	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
SSO0886	PWY-6664	di-myo-inositol phosphate biosynthesis
SSO0893	PWY-5958	acridone alkaloid biosynthesis
SSO0893	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
SSO0893	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
SSO0894	PWY-5958	acridone alkaloid biosynthesis
SSO0894	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
SSO0894	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
SSO0906	PWY-6832	2-aminoethylphosphonate degradation II
SSO0913	PWY-1042	glycolysis IV (plant cytosol)
SSO0913	PWY-1622	formaldehyde assimilation I (serine pathway)
SSO0913	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
SSO0913	PWY-5484	glycolysis II (from fructose 6-phosphate)
SSO0913	PWY-5723	Rubisco shunt
SSO0913	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SSO0913	PWY-6886	1-butanol autotrophic biosynthesis
SSO0913	PWY-6901	superpathway of glucose and xylose degradation
SSO0913	PWY-7003	glycerol degradation to butanol
SSO0913	PWY-7124	ethylene biosynthesis V (engineered)
SSO0913	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
SSO0929	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SSO0929	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SSO0929	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SSO0929	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SSO0929	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SSO0929	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SSO0929	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
SSO0929	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
SSO0943	PWY-6829	tRNA methylation (yeast)
SSO0953	PWY-6482	diphthamide biosynthesis (archaea)
SSO0955	PWY-6167	flavin biosynthesis II (archaea)
SSO0956	PWY-7285	methylwyosine biosynthesis
SSO0956	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
SSO0957	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
SSO0977	PWY-3081	L-lysine biosynthesis V
SSO0978	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SSO0978	PWY-5723	Rubisco shunt
SSO0981	PWY-1042	glycolysis IV (plant cytosol)
SSO0981	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
SSO0981	PWY-5484	glycolysis II (from fructose 6-phosphate)
SSO0981	PWY-5723	Rubisco shunt
SSO0981	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SSO0981	PWY-6886	1-butanol autotrophic biosynthesis
SSO0981	PWY-6901	superpathway of glucose and xylose degradation
SSO0981	PWY-7003	glycerol degradation to butanol
SSO0981	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
SSO0981	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SSO0987	PWY-622	starch biosynthesis
SSO0991	PWY-5941	glycogen degradation II (eukaryotic)
SSO0991	PWY-6724	starch degradation II
SSO0991	PWY-6737	starch degradation V
SSO0991	PWY-7238	sucrose biosynthesis II
SSO0996	PWY-5316	nicotine biosynthesis
SSO0996	PWY-5381	pyridine nucleotide cycling (plants)
SSO0996	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
SSO0996	PWY-7342	superpathway of nicotine biosynthesis
SSO0998	PWY-5316	nicotine biosynthesis
SSO0998	PWY-7342	superpathway of nicotine biosynthesis
SSO1004	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SSO1004	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SSO1019	PWY-5350	thiosulfate disproportionation III (rhodanese)
SSO1029	PWY-1881	formate oxidation to CO<sub>2</sub>
SSO1029	PWY-5497	purine nucleobases degradation II (anaerobic)
SSO1029	PWY-6696	oxalate degradation III
SSO1060	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
SSO1060	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
SSO1063	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SSO1063	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SSO1064	PWY-6123	inosine-5'-phosphate biosynthesis I
SSO1064	PWY-7234	inosine-5'-phosphate biosynthesis III
SSO1077	PWY-5392	reductive TCA cycle II
SSO1077	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SSO1077	PWY-5690	TCA cycle II (plants and fungi)
SSO1077	PWY-5913	TCA cycle VI (obligate autotrophs)
SSO1077	PWY-6728	methylaspartate cycle
SSO1077	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SSO1077	PWY-7254	TCA cycle VII (acetate-producers)
SSO1077	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SSO1087	PWY-6829	tRNA methylation (yeast)
SSO1087	PWY-7285	methylwyosine biosynthesis
SSO1087	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
SSO1112	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
SSO1112	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
SSO1148	PWY-4981	L-proline biosynthesis II (from arginine)
SSO1159	PWY-7425	2-chloroacrylate degradation I
SSO1191	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SSO1191	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SSO1191	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
SSO1191	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
SSO1191	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SSO1191	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SSO1192	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SSO1192	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SSO1192	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
SSO1192	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
SSO1192	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SSO1192	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SSO1214	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
SSO1214	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SSO1214	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SSO1214	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
SSO1218	PWY-5642	2,4-dinitrotoluene degradation
SSO1218	PWY-6373	acrylate degradation
SSO1221	PWY-5451	acetone degradation I (to methylglyoxal)
SSO1221	PWY-6588	pyruvate fermentation to acetone
SSO1221	PWY-6876	isopropanol biosynthesis
SSO1221	PWY-7466	acetone degradation III (to propane-1,2-diol)
SSO1222	PWY-5451	acetone degradation I (to methylglyoxal)
SSO1222	PWY-6588	pyruvate fermentation to acetone
SSO1222	PWY-6876	isopropanol biosynthesis
SSO1222	PWY-7466	acetone degradation III (to propane-1,2-diol)
SSO1223	PWY-5419	catechol degradation to 2-oxopent-4-enoate II
SSO1223	PWY-5641	2-nitrotoluene degradation
SSO1268	PWY-6749	CMP-legionaminate biosynthesis I
SSO1322	PWY-5101	L-isoleucine biosynthesis II
SSO1322	PWY-5103	L-isoleucine biosynthesis III
SSO1322	PWY-5104	L-isoleucine biosynthesis IV
SSO1322	PWY-7111	pyruvate fermentation to isobutanol (engineered)
SSO1324	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
SSO1333	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SSO1334	PWY-6728	methylaspartate cycle
SSO1334	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SSO1334	PWY-7118	chitin degradation to ethanol
SSO1334	PWY-7294	xylose degradation IV
SSO1334	PWY-7295	L-arabinose degradation IV
SSO1354	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
SSO1527	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
SSO1527	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
SSO1527	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
SSO1531	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SSO1531	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SSO1540	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SSO1566	PWY-6823	molybdenum cofactor biosynthesis
SSO1571	PWY-3781	aerobic respiration I (cytochrome c)
SSO1571	PWY-4521	arsenite oxidation I (respiratory)
SSO1571	PWY-6692	Fe(II) oxidation
SSO1571	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SSO1600	PWY-4261	glycerol degradation I
SSO1692	PWY-5751	phenylethanol biosynthesis
SSO1734	PWY-3221	dTDP-L-rhamnose biosynthesis II
SSO1734	PWY-6808	dTDP-D-forosamine biosynthesis
SSO1734	PWY-6942	dTDP-D-desosamine biosynthesis
SSO1734	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
SSO1734	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
SSO1734	PWY-6974	dTDP-L-olivose biosynthesis
SSO1734	PWY-6976	dTDP-L-mycarose biosynthesis
SSO1734	PWY-7104	dTDP-L-megosamine biosynthesis
SSO1734	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
SSO1734	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
SSO1734	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
SSO1734	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
SSO1734	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
SSO1734	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
SSO1734	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
SSO1734	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
SSO1741	PWY-5303	thiosulfate oxidation II (via tetrathionate)
SSO1742	PWY-5303	thiosulfate oxidation II (via tetrathionate)
SSO1781	PWY-3221	dTDP-L-rhamnose biosynthesis II
SSO1781	PWY-6808	dTDP-D-forosamine biosynthesis
SSO1781	PWY-6942	dTDP-D-desosamine biosynthesis
SSO1781	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
SSO1781	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
SSO1781	PWY-6974	dTDP-L-olivose biosynthesis
SSO1781	PWY-6976	dTDP-L-mycarose biosynthesis
SSO1781	PWY-7104	dTDP-L-megosamine biosynthesis
SSO1781	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
SSO1781	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
SSO1781	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
SSO1781	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
SSO1781	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
SSO1781	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
SSO1781	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
SSO1781	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
SSO1806	PWY-5392	reductive TCA cycle II
SSO1806	PWY-5537	pyruvate fermentation to acetate V
SSO1806	PWY-5538	pyruvate fermentation to acetate VI
SSO1806	PWY-5690	TCA cycle II (plants and fungi)
SSO1806	PWY-5913	TCA cycle VI (obligate autotrophs)
SSO1806	PWY-6728	methylaspartate cycle
SSO1806	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SSO1806	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SSO1808	PWY-5839	menaquinol-7 biosynthesis
SSO1808	PWY-5844	menaquinol-9 biosynthesis
SSO1808	PWY-5849	menaquinol-6 biosynthesis
SSO1808	PWY-5890	menaquinol-10 biosynthesis
SSO1808	PWY-5891	menaquinol-11 biosynthesis
SSO1808	PWY-5892	menaquinol-12 biosynthesis
SSO1808	PWY-5895	menaquinol-13 biosynthesis
SSO1817	PWY-5350	thiosulfate disproportionation III (rhodanese)
SSO1864	PWY-7533	gliotoxin biosynthesis
SSO1881	PWY-5303	thiosulfate oxidation II (via tetrathionate)
SSO1882	PWY-5303	thiosulfate oxidation II (via tetrathionate)
SSO1941	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
SSO1942	PWY-5101	L-isoleucine biosynthesis II
SSO1942	PWY-5103	L-isoleucine biosynthesis III
SSO1942	PWY-5104	L-isoleucine biosynthesis IV
SSO1942	PWY-7111	pyruvate fermentation to isobutanol (engineered)
SSO1949	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
SSO2054	PWY-5386	methylglyoxal degradation I
SSO2093	PWY-2661	trehalose biosynthesis V
SSO2095	PWY-2661	trehalose biosynthesis V
SSO2097	PWY-6167	flavin biosynthesis II (archaea)
SSO2097	PWY-6168	flavin biosynthesis III (fungi)
SSO2122	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
SSO2133	PWY-4261	glycerol degradation I
SSO2157	PWY-181	photorespiration
SSO2162	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SSO2162	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SSO2171	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SSO2171	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SSO2171	PWY-7185	UTP and CTP dephosphorylation I
SSO2171	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SSO2171	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SSO2178	PWY-2941	L-lysine biosynthesis II
SSO2178	PWY-2942	L-lysine biosynthesis III
SSO2178	PWY-5097	L-lysine biosynthesis VI
SSO2178	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SSO2178	PWY-6559	spermidine biosynthesis II
SSO2178	PWY-6562	norspermidine biosynthesis
SSO2178	PWY-7153	grixazone biosynthesis
SSO2178	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SSO2187	PWY-7158	L-phenylalanine degradation V
SSO2202	PWY-6700	queuosine biosynthesis
SSO2213	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
SSO2213	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
SSO2213	PWY-6269	adenosylcobalamin salvage from cobinamide II
SSO2219	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
SSO2219	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
SSO2219	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
SSO2222	PWY-101	photosynthesis light reactions
SSO2222	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
SSO2223	PWY-6829	tRNA methylation (yeast)
SSO2223	PWY-7285	methylwyosine biosynthesis
SSO2223	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
SSO2254	PWY-6938	NADH repair
SSO2256	PWY-1622	formaldehyde assimilation I (serine pathway)
SSO2256	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
SSO2256	PWY-5913	TCA cycle VI (obligate autotrophs)
SSO2256	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SSO2256	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
SSO2256	PWY-6549	L-glutamine biosynthesis III
SSO2256	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SSO2256	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
SSO2256	PWY-7124	ethylene biosynthesis V (engineered)
SSO2281	PWY-3801	sucrose degradation II (sucrose synthase)
SSO2281	PWY-3861	mannitol degradation II
SSO2281	PWY-3881	mannitol biosynthesis
SSO2281	PWY-5054	sorbitol biosynthesis I
SSO2281	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
SSO2281	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
SSO2281	PWY-5659	GDP-mannose biosynthesis
SSO2281	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SSO2281	PWY-621	sucrose degradation III (sucrose invertase)
SSO2281	PWY-622	starch biosynthesis
SSO2281	PWY-6531	mannitol cycle
SSO2281	PWY-6981	chitin biosynthesis
SSO2281	PWY-7238	sucrose biosynthesis II
SSO2281	PWY-7347	sucrose biosynthesis III
SSO2281	PWY-7385	1,3-propanediol biosynthesis (engineered)
SSO2281	PWY-7456	mannan degradation
SSO2281	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
SSO2297	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SSO2299	PWY-5194	siroheme biosynthesis
SSO2299	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SSO2301	PWY-5194	siroheme biosynthesis
SSO2301	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SSO2303	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SSO2305	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SSO2308	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SSO2356	PWY-3781	aerobic respiration I (cytochrome c)
SSO2356	PWY-4302	aerobic respiration III (alternative oxidase pathway)
SSO2356	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SSO2356	PWY-5690	TCA cycle II (plants and fungi)
SSO2356	PWY-6728	methylaspartate cycle
SSO2356	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SSO2356	PWY-7254	TCA cycle VII (acetate-producers)
SSO2356	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SSO2357	PWY-3781	aerobic respiration I (cytochrome c)
SSO2357	PWY-4302	aerobic respiration III (alternative oxidase pathway)
SSO2357	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SSO2357	PWY-5690	TCA cycle II (plants and fungi)
SSO2357	PWY-6728	methylaspartate cycle
SSO2357	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SSO2357	PWY-7254	TCA cycle VII (acetate-producers)
SSO2357	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SSO2365	PWY-6823	molybdenum cofactor biosynthesis
SSO2367	PWY-702	L-methionine biosynthesis II
SSO2393	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
SSO2393	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
SSO2393	PWY-6897	thiamin salvage II
SSO2393	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
SSO2393	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
SSO2393	PWY-6910	hydroxymethylpyrimidine salvage
SSO2393	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
SSO2393	PWY-7356	thiamin salvage IV (yeast)
SSO2393	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
SSO2394	PWY-6823	molybdenum cofactor biosynthesis
SSO2397	PWY-6654	phosphopantothenate biosynthesis III
SSO2398	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SSO2398	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SSO2400	PWY-6654	phosphopantothenate biosynthesis III
SSO2407	PWY-6871	3-methylbutanol biosynthesis
SSO2408	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
SSO2408	PWY-6148	tetrahydromethanopterin biosynthesis
SSO2408	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
SSO2408	PWY-6898	thiamin salvage III
SSO2408	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
SSO2408	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
SSO2408	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
SSO2425	PWY-5743	3-hydroxypropanoate cycle
SSO2425	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SSO2425	PWY-6728	methylaspartate cycle
SSO2425	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SSO2426	PWY-5743	3-hydroxypropanoate cycle
SSO2426	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SSO2426	PWY-6728	methylaspartate cycle
SSO2426	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SSO2435	PWY-5194	siroheme biosynthesis
SSO2435	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SSO2439	PWY-6829	tRNA methylation (yeast)
SSO2439	PWY-7285	methylwyosine biosynthesis
SSO2439	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
SSO2440	PWY-381	nitrate reduction II (assimilatory)
SSO2440	PWY-5675	nitrate reduction V (assimilatory)
SSO2440	PWY-6549	L-glutamine biosynthesis III
SSO2440	PWY-6963	ammonia assimilation cycle I
SSO2440	PWY-6964	ammonia assimilation cycle II
SSO2451	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
SSO2463	PWY-4381	fatty acid biosynthesis initiation I
SSO2463	PWY-5743	3-hydroxypropanoate cycle
SSO2463	PWY-5744	glyoxylate assimilation
SSO2463	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SSO2463	PWY-6679	jadomycin biosynthesis
SSO2463	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SSO2482	PWY-5392	reductive TCA cycle II
SSO2482	PWY-5537	pyruvate fermentation to acetate V
SSO2482	PWY-5538	pyruvate fermentation to acetate VI
SSO2482	PWY-5690	TCA cycle II (plants and fungi)
SSO2482	PWY-5913	TCA cycle VI (obligate autotrophs)
SSO2482	PWY-6728	methylaspartate cycle
SSO2482	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SSO2482	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SSO2483	PWY-5392	reductive TCA cycle II
SSO2483	PWY-5537	pyruvate fermentation to acetate V
SSO2483	PWY-5538	pyruvate fermentation to acetate VI
SSO2483	PWY-5690	TCA cycle II (plants and fungi)
SSO2483	PWY-5913	TCA cycle VI (obligate autotrophs)
SSO2483	PWY-6728	methylaspartate cycle
SSO2483	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SSO2483	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SSO2485	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SSO2485	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
SSO2485	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
SSO2485	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SSO2497	PWY-5686	UMP biosynthesis
SSO2498	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SSO2498	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SSO2498	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SSO2498	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SSO2498	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SSO2498	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SSO2498	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
SSO2498	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
SSO2514	PWY-1361	benzoyl-CoA degradation I (aerobic)
SSO2514	PWY-5109	2-methylbutanoate biosynthesis
SSO2514	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
SSO2514	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
SSO2514	PWY-5177	glutaryl-CoA degradation
SSO2514	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SSO2514	PWY-6435	4-hydroxybenzoate biosynthesis V
SSO2514	PWY-6583	pyruvate fermentation to butanol I
SSO2514	PWY-6863	pyruvate fermentation to hexanol
SSO2514	PWY-6883	pyruvate fermentation to butanol II
SSO2514	PWY-6944	androstenedione degradation
SSO2514	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
SSO2514	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
SSO2514	PWY-7007	methyl ketone biosynthesis
SSO2514	PWY-7046	4-coumarate degradation (anaerobic)
SSO2514	PWY-7094	fatty acid salvage
SSO2514	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
SSO2514	PWY-735	jasmonic acid biosynthesis
SSO2514	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
SSO2526	PWY-4261	glycerol degradation I
SSO2526	PWY-6118	glycerol-3-phosphate shuttle
SSO2526	PWY-6952	glycerophosphodiester degradation
SSO2534	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
SSO2537	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SSO2554	PWY-381	nitrate reduction II (assimilatory)
SSO2554	PWY-5675	nitrate reduction V (assimilatory)
SSO2554	PWY-6549	L-glutamine biosynthesis III
SSO2554	PWY-6963	ammonia assimilation cycle I
SSO2554	PWY-6964	ammonia assimilation cycle II
SSO2560	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
SSO2560	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
SSO2587	PWY-5747	2-methylcitrate cycle II
SSO2592	PWY-1042	glycolysis IV (plant cytosol)
SSO2592	PWY-5484	glycolysis II (from fructose 6-phosphate)
SSO2592	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SSO2592	PWY-6891	thiazole biosynthesis II (Bacillus)
SSO2592	PWY-6892	thiazole biosynthesis I (E. coli)
SSO2592	PWY-7003	glycerol degradation to butanol
SSO2597	PWY-6832	2-aminoethylphosphonate degradation II
SSO2598	PWY-6899	base-degraded thiamin salvage
SSO2598	PWY-7356	thiamin salvage IV (yeast)
SSO2657	PWY-3781	aerobic respiration I (cytochrome c)
SSO2657	PWY-4521	arsenite oxidation I (respiratory)
SSO2657	PWY-6692	Fe(II) oxidation
SSO2657	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SSO2673	PWY-6906	chitin derivatives degradation
SSO2673	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
SSO2673	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
SSO2706	PWY-4202	arsenate detoxification I (glutaredoxin)
SSO2706	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
SSO2706	PWY-6608	guanosine nucleotides degradation III
SSO2706	PWY-6609	adenine and adenosine salvage III
SSO2706	PWY-6611	adenine and adenosine salvage V
SSO2706	PWY-6620	guanine and guanosine salvage
SSO2706	PWY-6627	salinosporamide A biosynthesis
SSO2706	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
SSO2706	PWY-7179	purine deoxyribonucleosides degradation I
SSO2706	PWY-7179-1	purine deoxyribonucleosides degradation
SSO2732	PWY-40	putrescine biosynthesis I
SSO2732	PWY-6305	putrescine biosynthesis IV
SSO2735	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
SSO2735	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SSO2735	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SSO2735	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
SSO2824	PWY-1881	formate oxidation to CO<sub>2</sub>
SSO2824	PWY-5497	purine nucleobases degradation II (anaerobic)
SSO2824	PWY-6696	oxalate degradation III
SSO2832	PWY-6167	flavin biosynthesis II (archaea)
SSO2863	PWY-6672	<i>cis</i>-genanyl-CoA degradation
SSO2863	PWY-7118	chitin degradation to ethanol
SSO2865	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
SSO2871	PWY-1361	benzoyl-CoA degradation I (aerobic)
SSO2871	PWY-5109	2-methylbutanoate biosynthesis
SSO2871	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
SSO2871	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
SSO2871	PWY-5177	glutaryl-CoA degradation
SSO2871	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SSO2871	PWY-6435	4-hydroxybenzoate biosynthesis V
SSO2871	PWY-6583	pyruvate fermentation to butanol I
SSO2871	PWY-6863	pyruvate fermentation to hexanol
SSO2871	PWY-6883	pyruvate fermentation to butanol II
SSO2871	PWY-6944	androstenedione degradation
SSO2871	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
SSO2871	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
SSO2871	PWY-7007	methyl ketone biosynthesis
SSO2871	PWY-7046	4-coumarate degradation (anaerobic)
SSO2871	PWY-7094	fatty acid salvage
SSO2871	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
SSO2871	PWY-735	jasmonic acid biosynthesis
SSO2871	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
SSO2904	PWY-5943	&beta;-carotene biosynthesis
SSO2904	PWY-5947	lutein biosynthesis
SSO2908	PWY-5194	siroheme biosynthesis
SSO2908	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SSO2909	PWY-6683	sulfate reduction III (assimilatory)
SSO2912	PWY-5278	sulfite oxidation III
SSO2912	PWY-5340	sulfate activation for sulfonation
SSO2912	PWY-6683	sulfate reduction III (assimilatory)
SSO2912	PWY-6932	selenate reduction
SSO2939	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SSO2939	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SSO2973	PWY-3781	aerobic respiration I (cytochrome c)
SSO2973	PWY-4521	arsenite oxidation I (respiratory)
SSO2973	PWY-6692	Fe(II) oxidation
SSO2973	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SSO2978	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
SSO2978	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
SSO2989	PWY-7391	isoprene biosynthesis II (engineered)
SSO2989	PWY-922	mevalonate pathway I
SSO2996	PWY-1361	benzoyl-CoA degradation I (aerobic)
SSO2996	PWY-5109	2-methylbutanoate biosynthesis
SSO2996	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
SSO2996	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
SSO2996	PWY-5177	glutaryl-CoA degradation
SSO2996	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SSO2996	PWY-6435	4-hydroxybenzoate biosynthesis V
SSO2996	PWY-6583	pyruvate fermentation to butanol I
SSO2996	PWY-6863	pyruvate fermentation to hexanol
SSO2996	PWY-6883	pyruvate fermentation to butanol II
SSO2996	PWY-6944	androstenedione degradation
SSO2996	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
SSO2996	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
SSO2996	PWY-7007	methyl ketone biosynthesis
SSO2996	PWY-7046	4-coumarate degradation (anaerobic)
SSO2996	PWY-7094	fatty acid salvage
SSO2996	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
SSO2996	PWY-735	jasmonic acid biosynthesis
SSO2996	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
SSO3007	PWY-6807	xyloglucan degradation II (exoglucanase)
SSO3036	PWY-6807	xyloglucan degradation II (exoglucanase)
SSO3071	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
SSO3071	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
SSO3091	PWY-5303	thiosulfate oxidation II (via tetrathionate)
SSO3107	PWY-5101	L-isoleucine biosynthesis II
SSO3107	PWY-5103	L-isoleucine biosynthesis III
SSO3107	PWY-5104	L-isoleucine biosynthesis IV
SSO3107	PWY-7111	pyruvate fermentation to isobutanol (engineered)
SSO3155	PWY-6785	hydrogen production VIII
SSO3157	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
SSO3157	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
SSO3158	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
SSO3158	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
SSO3158	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
SSO3159	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
SSO3159	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
SSO3163	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SSO3163	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SSO3165	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SSO3165	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SSO3203	PWY-6672	<i>cis</i>-genanyl-CoA degradation
SSO3203	PWY-7118	chitin degradation to ethanol
SSO3216	PWY-4041	&gamma;-glutamyl cycle
SSO3216	PWY-5826	hypoglycin biosynthesis
SSO3232	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
SSO3234	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
SSO3234	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
SSO3234	PWY-6269	adenosylcobalamin salvage from cobinamide II
SSO6175	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SSO6264	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SSO6264	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SSO6264	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
