SYNGTI_0006	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
SYNGTI_0007	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
SYNGTI_0007	PWY-5739	GDP-D-perosamine biosynthesis
SYNGTI_0007	PWY-5740	GDP-L-colitose biosynthesis
SYNGTI_0007	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
SYNGTI_0008	PWY-101	photosynthesis light reactions
SYNGTI_0008	PWY-6785	hydrogen production VIII
SYNGTI_0009	PWY-40	putrescine biosynthesis I
SYNGTI_0009	PWY-43	putrescine biosynthesis II
SYNGTI_0009	PWY-6305	putrescine biosynthesis IV
SYNGTI_0009	PWY-6834	spermidine biosynthesis III
SYNGTI_0047	PWY-622	starch biosynthesis
SYNGTI_0065	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SYNGTI_0066	PWY-2941	L-lysine biosynthesis II
SYNGTI_0066	PWY-2942	L-lysine biosynthesis III
SYNGTI_0066	PWY-5097	L-lysine biosynthesis VI
SYNGTI_0068	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SYNGTI_0068	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SYNGTI_0068	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SYNGTI_0072	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
SYNGTI_0074	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SYNGTI_0074	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
SYNGTI_0074	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
SYNGTI_0074	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SYNGTI_0082	PWY-6502	oxidized GTP and dGTP detoxification
SYNGTI_0087	PWY-7560	methylerythritol phosphate pathway II
SYNGTI_0100	PWY-6823	molybdenum cofactor biosynthesis
SYNGTI_0100	PWY-6891	thiazole biosynthesis II (Bacillus)
SYNGTI_0100	PWY-6892	thiazole biosynthesis I (E. coli)
SYNGTI_0100	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
SYNGTI_0112	PWY-5958	acridone alkaloid biosynthesis
SYNGTI_0112	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
SYNGTI_0112	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
SYNGTI_0125	PWY-5194	siroheme biosynthesis
SYNGTI_0125	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SYNGTI_0134	PWY-40	putrescine biosynthesis I
SYNGTI_0134	PWY-6305	putrescine biosynthesis IV
SYNGTI_0151	PWY-6749	CMP-legionaminate biosynthesis I
SYNGTI_0159	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SYNGTI_0175	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
SYNGTI_0175	PWY-6148	tetrahydromethanopterin biosynthesis
SYNGTI_0175	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
SYNGTI_0175	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
SYNGTI_0179	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
SYNGTI_0179	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
SYNGTI_0192	PWY-7183	pyrimidine nucleobases salvage I
SYNGTI_0197	PWY-5532	adenosine nucleotides degradation IV
SYNGTI_0197	PWY-5723	Rubisco shunt
SYNGTI_0211	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
SYNGTI_0211	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
SYNGTI_0224	PWY-5941	glycogen degradation II (eukaryotic)
SYNGTI_0224	PWY-6724	starch degradation II
SYNGTI_0224	PWY-6737	starch degradation V
SYNGTI_0224	PWY-7238	sucrose biosynthesis II
SYNGTI_0225	PWY-5386	methylglyoxal degradation I
SYNGTI_0226	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
SYNGTI_0226	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
SYNGTI_0226	PWY-6896	thiamin salvage I
SYNGTI_0226	PWY-6897	thiamin salvage II
SYNGTI_0235	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SYNGTI_0236	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SYNGTI_0236	PWY-5723	Rubisco shunt
SYNGTI_0247	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
SYNGTI_0250	PWY-5198	factor 420 biosynthesis
SYNGTI_0255	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
SYNGTI_0255	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
SYNGTI_0257	PWY-5839	menaquinol-7 biosynthesis
SYNGTI_0257	PWY-5844	menaquinol-9 biosynthesis
SYNGTI_0257	PWY-5849	menaquinol-6 biosynthesis
SYNGTI_0257	PWY-5890	menaquinol-10 biosynthesis
SYNGTI_0257	PWY-5891	menaquinol-11 biosynthesis
SYNGTI_0257	PWY-5892	menaquinol-12 biosynthesis
SYNGTI_0257	PWY-5895	menaquinol-13 biosynthesis
SYNGTI_0259	PWY-5913	TCA cycle VI (obligate autotrophs)
SYNGTI_0259	PWY-6549	L-glutamine biosynthesis III
SYNGTI_0259	PWY-6728	methylaspartate cycle
SYNGTI_0259	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SYNGTI_0259	PWY-7124	ethylene biosynthesis V (engineered)
SYNGTI_0259	PWY-7254	TCA cycle VII (acetate-producers)
SYNGTI_0259	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
SYNGTI_0267	PWY-6829	tRNA methylation (yeast)
SYNGTI_0267	PWY-7285	methylwyosine biosynthesis
SYNGTI_0267	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
SYNGTI_0269	PWY-1042	glycolysis IV (plant cytosol)
SYNGTI_0269	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SYNGTI_0269	PWY-5484	glycolysis II (from fructose 6-phosphate)
SYNGTI_0269	PWY-7385	1,3-propanediol biosynthesis (engineered)
SYNGTI_0273	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
SYNGTI_0281	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SYNGTI_0281	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SYNGTI_0287	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
SYNGTI_0287	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
SYNGTI_0288	PWY-5874	heme degradation
SYNGTI_0288	PWY-5915	phycoerythrobilin biosynthesis I
SYNGTI_0288	PWY-5917	phycocyanobilin biosynthesis
SYNGTI_0288	PWY-7170	phytochromobilin biosynthesis
SYNGTI_0293	PWY-6683	sulfate reduction III (assimilatory)
SYNGTI_0302	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SYNGTI_0304	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
SYNGTI_0304	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
SYNGTI_0304	PWY-6164	3-dehydroquinate biosynthesis I
SYNGTI_0311	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
SYNGTI_0311	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
SYNGTI_0325	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
SYNGTI_0325	PWY-5940	streptomycin biosynthesis
SYNGTI_0326	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
SYNGTI_0343	PWY-3821	galactose degradation III
SYNGTI_0343	PWY-6317	galactose degradation I (Leloir pathway)
SYNGTI_0343	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
SYNGTI_0343	PWY-6527	stachyose degradation
SYNGTI_0343	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
SYNGTI_0343	PWY-7344	UDP-D-galactose biosynthesis
SYNGTI_0356	PWY-3821	galactose degradation III
SYNGTI_0356	PWY-6317	galactose degradation I (Leloir pathway)
SYNGTI_0356	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
SYNGTI_0356	PWY-6527	stachyose degradation
SYNGTI_0356	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
SYNGTI_0356	PWY-7344	UDP-D-galactose biosynthesis
SYNGTI_0368	PWY-5392	reductive TCA cycle II
SYNGTI_0368	PWY-5537	pyruvate fermentation to acetate V
SYNGTI_0368	PWY-5538	pyruvate fermentation to acetate VI
SYNGTI_0368	PWY-5690	TCA cycle II (plants and fungi)
SYNGTI_0368	PWY-5913	TCA cycle VI (obligate autotrophs)
SYNGTI_0368	PWY-6728	methylaspartate cycle
SYNGTI_0368	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SYNGTI_0368	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SYNGTI_0374	PWY-5386	methylglyoxal degradation I
SYNGTI_0375	PWY-5686	UMP biosynthesis
SYNGTI_0381	PWY-5340	sulfate activation for sulfonation
SYNGTI_0391	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SYNGTI_0391	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
SYNGTI_0391	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SYNGTI_0407	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
SYNGTI_0407	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
SYNGTI_0407	PWY-6897	thiamin salvage II
SYNGTI_0407	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
SYNGTI_0407	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
SYNGTI_0407	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
SYNGTI_0407	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
SYNGTI_0423	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
SYNGTI_0423	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
SYNGTI_0423	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
SYNGTI_0447	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
SYNGTI_0447	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
SYNGTI_0447	PWY-6269	adenosylcobalamin salvage from cobinamide II
SYNGTI_0460	PWY-5971	palmitate biosynthesis II (bacteria and plants)
SYNGTI_0460	PWY-5973	<i>cis</i>-vaccenate biosynthesis
SYNGTI_0460	PWY-5989	stearate biosynthesis II (bacteria and plants)
SYNGTI_0460	PWY-6113	superpathway of mycolate biosynthesis
SYNGTI_0460	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
SYNGTI_0460	PWY-6519	8-amino-7-oxononanoate biosynthesis I
SYNGTI_0460	PWY-7096	triclosan resistance
SYNGTI_0460	PWYG-321	mycolate biosynthesis
SYNGTI_0464	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
SYNGTI_0464	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
SYNGTI_0477	PWY-5667	CDP-diacylglycerol biosynthesis I
SYNGTI_0477	PWY-5981	CDP-diacylglycerol biosynthesis III
SYNGTI_0479	PWY-381	nitrate reduction II (assimilatory)
SYNGTI_0479	PWY-5675	nitrate reduction V (assimilatory)
SYNGTI_0479	PWY-6549	L-glutamine biosynthesis III
SYNGTI_0479	PWY-6963	ammonia assimilation cycle I
SYNGTI_0479	PWY-6964	ammonia assimilation cycle II
SYNGTI_0488	PWY-4321	L-glutamate degradation IV
SYNGTI_0498	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SYNGTI_0507	PWY-5704	urea degradation II
SYNGTI_0514	PWY-6891	thiazole biosynthesis II (Bacillus)
SYNGTI_0514	PWY-6892	thiazole biosynthesis I (E. coli)
SYNGTI_0514	PWY-7560	methylerythritol phosphate pathway II
SYNGTI_0549	PWY-1622	formaldehyde assimilation I (serine pathway)
SYNGTI_0549	PWY-181	photorespiration
SYNGTI_0549	PWY-2161	folate polyglutamylation
SYNGTI_0549	PWY-2201	folate transformations I
SYNGTI_0549	PWY-3661	glycine betaine degradation I
SYNGTI_0549	PWY-3661-1	glycine betaine degradation II (mammalian)
SYNGTI_0549	PWY-3841	folate transformations II
SYNGTI_0549	PWY-5497	purine nucleobases degradation II (anaerobic)
SYNGTI_0588	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
SYNGTI_0589	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
SYNGTI_0589	PWY-3162	L-tryptophan degradation V (side chain pathway)
SYNGTI_0589	PWY-5057	L-valine degradation II
SYNGTI_0589	PWY-5076	L-leucine degradation III
SYNGTI_0589	PWY-5078	L-isoleucine degradation II
SYNGTI_0589	PWY-5079	L-phenylalanine degradation III
SYNGTI_0589	PWY-5082	L-methionine degradation III
SYNGTI_0589	PWY-5480	pyruvate fermentation to ethanol I
SYNGTI_0589	PWY-5486	pyruvate fermentation to ethanol II
SYNGTI_0589	PWY-5751	phenylethanol biosynthesis
SYNGTI_0589	PWY-6028	acetoin degradation
SYNGTI_0589	PWY-6313	serotonin degradation
SYNGTI_0589	PWY-6333	acetaldehyde biosynthesis I
SYNGTI_0589	PWY-6342	noradrenaline and adrenaline degradation
SYNGTI_0589	PWY-6587	pyruvate fermentation to ethanol III
SYNGTI_0589	PWY-6802	salidroside biosynthesis
SYNGTI_0589	PWY-6871	3-methylbutanol biosynthesis
SYNGTI_0589	PWY-7013	L-1,2-propanediol degradation
SYNGTI_0589	PWY-7111	pyruvate fermentation to isobutanol (engineered)
SYNGTI_0589	PWY-7118	chitin degradation to ethanol
SYNGTI_0589	PWY-7396	butanol and isobutanol biosynthesis (engineered)
SYNGTI_0589	PWY-7557	dehydrodiconiferyl alcohol degradation
SYNGTI_0591	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
SYNGTI_0591	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
SYNGTI_0613	PWY-5482	pyruvate fermentation to acetate II
SYNGTI_0613	PWY-5485	pyruvate fermentation to acetate IV
SYNGTI_0613	PWY-5497	purine nucleobases degradation II (anaerobic)
SYNGTI_0642	PWY-5198	factor 420 biosynthesis
SYNGTI_0652	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
SYNGTI_0664	PWY-5152	leucodelphinidin biosynthesis
SYNGTI_0694	PWY-4381	fatty acid biosynthesis initiation I
SYNGTI_0694	PWY-6799	fatty acid biosynthesis (plant mitochondria)
SYNGTI_0694	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SYNGTI_0698	PWY-5381	pyridine nucleotide cycling (plants)
SYNGTI_0698	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
SYNGTI_0700	PWY-6614	tetrahydrofolate biosynthesis
SYNGTI_0709	PWY-4983	L-citrulline-nitric oxide cycle
SYNGTI_0709	PWY-4984	urea cycle
SYNGTI_0709	PWY-5	canavanine biosynthesis
SYNGTI_0709	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SYNGTI_0709	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SYNGTI_0714	PWY-3781	aerobic respiration I (cytochrome c)
SYNGTI_0714	PWY-4521	arsenite oxidation I (respiratory)
SYNGTI_0714	PWY-6692	Fe(II) oxidation
SYNGTI_0714	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SYNGTI_0723	PWY-40	putrescine biosynthesis I
SYNGTI_0723	PWY-6305	putrescine biosynthesis IV
SYNGTI_0736	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SYNGTI_0736	PWY-5723	Rubisco shunt
SYNGTI_0736	PWY-6891	thiazole biosynthesis II (Bacillus)
SYNGTI_0736	PWY-6892	thiazole biosynthesis I (E. coli)
SYNGTI_0736	PWY-6901	superpathway of glucose and xylose degradation
SYNGTI_0736	PWY-7560	methylerythritol phosphate pathway II
SYNGTI_0744	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SYNGTI_0756	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SYNGTI_0782	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SYNGTI_0782	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SYNGTI_0824	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SYNGTI_0824	PWY-6416	quinate degradation II
SYNGTI_0824	PWY-6707	gallate biosynthesis
SYNGTI_0834	PWY-5659	GDP-mannose biosynthesis
SYNGTI_0834	PWY-6073	alginate biosynthesis I (algal)
SYNGTI_0834	PWY-6082	alginate biosynthesis II (bacterial)
SYNGTI_0834	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
SYNGTI_0841	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SYNGTI_0863	PWY-101	photosynthesis light reactions
SYNGTI_0863	PWY-6785	hydrogen production VIII
SYNGTI_0864	PWY-101	photosynthesis light reactions
SYNGTI_0864	PWY-6785	hydrogen production VIII
SYNGTI_0876	PWY-6936	seleno-amino acid biosynthesis
SYNGTI_0877	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
SYNGTI_0883	PWY-5443	aminopropanol phosphate biosynthesis I
SYNGTI_0889	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SYNGTI_0892	PWY-7560	methylerythritol phosphate pathway II
SYNGTI_0906	PWY-5381	pyridine nucleotide cycling (plants)
SYNGTI_0906	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
SYNGTI_0906	PWY-6596	adenosine nucleotides degradation I
SYNGTI_0906	PWY-6606	guanosine nucleotides degradation II
SYNGTI_0906	PWY-6607	guanosine nucleotides degradation I
SYNGTI_0906	PWY-6608	guanosine nucleotides degradation III
SYNGTI_0906	PWY-7185	UTP and CTP dephosphorylation I
SYNGTI_0937	PWY-6123	inosine-5'-phosphate biosynthesis I
SYNGTI_0937	PWY-6124	inosine-5'-phosphate biosynthesis II
SYNGTI_0937	PWY-7234	inosine-5'-phosphate biosynthesis III
SYNGTI_0945	PWY-3781	aerobic respiration I (cytochrome c)
SYNGTI_0945	PWY-4302	aerobic respiration III (alternative oxidase pathway)
SYNGTI_0945	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SYNGTI_0945	PWY-5690	TCA cycle II (plants and fungi)
SYNGTI_0945	PWY-6728	methylaspartate cycle
SYNGTI_0945	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SYNGTI_0945	PWY-7254	TCA cycle VII (acetate-producers)
SYNGTI_0945	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SYNGTI_0946	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
SYNGTI_0946	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
SYNGTI_0961	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
SYNGTI_0961	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
SYNGTI_0976	PWY-6698	oxalate degradation V
SYNGTI_0977	PWY-5941	glycogen degradation II (eukaryotic)
SYNGTI_0977	PWY-622	starch biosynthesis
SYNGTI_0977	PWY-6731	starch degradation III
SYNGTI_0977	PWY-6737	starch degradation V
SYNGTI_0977	PWY-7238	sucrose biosynthesis II
SYNGTI_0993	PWY-6167	flavin biosynthesis II (archaea)
SYNGTI_0993	PWY-6168	flavin biosynthesis III (fungi)
SYNGTI_1000	PWY-1042	glycolysis IV (plant cytosol)
SYNGTI_1000	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
SYNGTI_1000	PWY-5484	glycolysis II (from fructose 6-phosphate)
SYNGTI_1000	PWY-5723	Rubisco shunt
SYNGTI_1000	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SYNGTI_1000	PWY-6886	1-butanol autotrophic biosynthesis
SYNGTI_1000	PWY-6901	superpathway of glucose and xylose degradation
SYNGTI_1000	PWY-7003	glycerol degradation to butanol
SYNGTI_1000	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
SYNGTI_1000	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SYNGTI_1004	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
SYNGTI_1012	PWY-5941	glycogen degradation II (eukaryotic)
SYNGTI_1012	PWY-622	starch biosynthesis
SYNGTI_1012	PWY-6731	starch degradation III
SYNGTI_1012	PWY-6737	starch degradation V
SYNGTI_1012	PWY-7238	sucrose biosynthesis II
SYNGTI_1013	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SYNGTI_1024	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
SYNGTI_1028	PWY-6562	norspermidine biosynthesis
SYNGTI_1035	PWY-1042	glycolysis IV (plant cytosol)
SYNGTI_1035	PWY-5484	glycolysis II (from fructose 6-phosphate)
SYNGTI_1035	PWY-6901	superpathway of glucose and xylose degradation
SYNGTI_1035	PWY-7003	glycerol degradation to butanol
SYNGTI_1038	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
SYNGTI_1038	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
SYNGTI_1038	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
SYNGTI_1040	PWY-5367	petroselinate biosynthesis
SYNGTI_1040	PWY-5971	palmitate biosynthesis II (bacteria and plants)
SYNGTI_1040	PWY-5973	<i>cis</i>-vaccenate biosynthesis
SYNGTI_1040	PWY-5989	stearate biosynthesis II (bacteria and plants)
SYNGTI_1040	PWY-5994	palmitate biosynthesis I (animals and fungi)
SYNGTI_1040	PWY-6113	superpathway of mycolate biosynthesis
SYNGTI_1040	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
SYNGTI_1040	PWY-6519	8-amino-7-oxononanoate biosynthesis I
SYNGTI_1040	PWY-6951	SYNGTI_1040|fabG|YP_005382802.1|GeneID:11973460
SYNGTI_1040	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
SYNGTI_1040	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SYNGTI_1040	PWYG-321	mycolate biosynthesis
SYNGTI_1054	PWY-101	photosynthesis light reactions
SYNGTI_1054	PWY-6785	hydrogen production VIII
SYNGTI_1087	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
SYNGTI_1101	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SYNGTI_1101	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SYNGTI_1115	PWY-702	L-methionine biosynthesis II
SYNGTI_1117	PWY-6749	CMP-legionaminate biosynthesis I
SYNGTI_1120	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
SYNGTI_1120	PWY-6167	flavin biosynthesis II (archaea)
SYNGTI_1120	PWY-6168	flavin biosynthesis III (fungi)
SYNGTI_1129	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SYNGTI_1129	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
SYNGTI_1131	PWY-1281	sulfoacetaldehyde degradation I
SYNGTI_1131	PWY-5482	pyruvate fermentation to acetate II
SYNGTI_1131	PWY-5485	pyruvate fermentation to acetate IV
SYNGTI_1131	PWY-5497	purine nucleobases degradation II (anaerobic)
SYNGTI_1131	PWY-6637	sulfolactate degradation II
SYNGTI_1136	PWY-6703	preQ<sub>0</sub> biosynthesis
SYNGTI_1137	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SYNGTI_1137	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SYNGTI_1141	PWY-7560	methylerythritol phosphate pathway II
SYNGTI_1147	PWY-2201	folate transformations I
SYNGTI_1147	PWY-3841	folate transformations II
SYNGTI_1162	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SYNGTI_1195	PWY-3781	aerobic respiration I (cytochrome c)
SYNGTI_1195	PWY-4302	aerobic respiration III (alternative oxidase pathway)
SYNGTI_1195	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SYNGTI_1195	PWY-5690	TCA cycle II (plants and fungi)
SYNGTI_1195	PWY-6728	methylaspartate cycle
SYNGTI_1195	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SYNGTI_1195	PWY-7254	TCA cycle VII (acetate-producers)
SYNGTI_1195	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SYNGTI_1209	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SYNGTI_1209	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SYNGTI_1224	PWY-101	photosynthesis light reactions
SYNGTI_1224	PWY-6785	hydrogen production VIII
SYNGTI_1229	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
SYNGTI_1237	PWY-5686	UMP biosynthesis
SYNGTI_1266	PWY-7158	L-phenylalanine degradation V
SYNGTI_1274	PWY-5704	urea degradation II
SYNGTI_1313	PWY-7052	cyanophycin metabolism
SYNGTI_1314	PWY-7052	cyanophycin metabolism
SYNGTI_1323	PWY-2161	folate polyglutamylation
SYNGTI_1331	PWY-5971	palmitate biosynthesis II (bacteria and plants)
SYNGTI_1331	PWY-5973	<i>cis</i>-vaccenate biosynthesis
SYNGTI_1331	PWY-5989	stearate biosynthesis II (bacteria and plants)
SYNGTI_1331	PWY-5994	palmitate biosynthesis I (animals and fungi)
SYNGTI_1331	PWY-6113	superpathway of mycolate biosynthesis
SYNGTI_1331	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
SYNGTI_1331	PWY-6519	8-amino-7-oxononanoate biosynthesis I
SYNGTI_1331	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SYNGTI_1331	PWYG-321	mycolate biosynthesis
SYNGTI_1360	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
SYNGTI_1360	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
SYNGTI_1360	PWY-6268	adenosylcobalamin salvage from cobalamin
SYNGTI_1360	PWY-6269	adenosylcobalamin salvage from cobinamide II
SYNGTI_1375	PWY-3821	galactose degradation III
SYNGTI_1375	PWY-6317	galactose degradation I (Leloir pathway)
SYNGTI_1375	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
SYNGTI_1375	PWY-6527	stachyose degradation
SYNGTI_1375	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
SYNGTI_1375	PWY-7344	UDP-D-galactose biosynthesis
SYNGTI_1394	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
SYNGTI_1395	PWY-3781	aerobic respiration I (cytochrome c)
SYNGTI_1395	PWY-4521	arsenite oxidation I (respiratory)
SYNGTI_1395	PWY-6692	Fe(II) oxidation
SYNGTI_1395	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SYNGTI_1401	PWY-5101	L-isoleucine biosynthesis II
SYNGTI_1401	PWY-5103	L-isoleucine biosynthesis III
SYNGTI_1401	PWY-5104	L-isoleucine biosynthesis IV
SYNGTI_1401	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
SYNGTI_1401	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
SYNGTI_1401	PWY-6389	(<i>S</i>)-acetoin biosynthesis
SYNGTI_1401	PWY-7111	pyruvate fermentation to isobutanol (engineered)
SYNGTI_1402	PWY-6098	diploterol and cycloartenol biosynthesis
SYNGTI_1402	PWY-7072	hopanoid biosynthesis (bacteria)
SYNGTI_1412	PWY-5484	glycolysis II (from fructose 6-phosphate)
SYNGTI_1425	PWY-6605	adenine and adenosine salvage II
SYNGTI_1425	PWY-6610	adenine and adenosine salvage IV
SYNGTI_1442	PWY-4381	fatty acid biosynthesis initiation I
SYNGTI_1446	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
SYNGTI_1446	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
SYNGTI_1446	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
SYNGTI_1451	PWY-6854	ethylene biosynthesis III (microbes)
SYNGTI_1452	PWY-7396	butanol and isobutanol biosynthesis (engineered)
SYNGTI_1463	PWY-5988	wound-induced proteolysis I
SYNGTI_1463	PWY-6018	seed germination protein turnover
SYNGTI_1482	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
SYNGTI_1482	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
SYNGTI_1483	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
SYNGTI_1483	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
SYNGTI_1491	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SYNGTI_1491	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
SYNGTI_1493	PWY-6164	3-dehydroquinate biosynthesis I
SYNGTI_1504	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
SYNGTI_1512	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SYNGTI_1520	PWY-5382	hydrogen oxidation II (aerobic, NAD)
SYNGTI_1520	PWY-6758	hydrogen production II
SYNGTI_1525	PWY-6749	CMP-legionaminate biosynthesis I
SYNGTI_1530	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SYNGTI_1530	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SYNGTI_1531	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SYNGTI_1531	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SYNGTI_1540	PWY-2781	<i>cis</i>-zeatin biosynthesis
SYNGTI_1545	PWY-3961	phosphopantothenate biosynthesis II
SYNGTI_1546	PWY-5129	sphingolipid biosynthesis (plants)
SYNGTI_1553	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
SYNGTI_1553	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
SYNGTI_1554	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
SYNGTI_1554	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
SYNGTI_1554	PWY-5901	2,3-dihydroxybenzoate biosynthesis
SYNGTI_1554	PWY-6406	salicylate biosynthesis I
SYNGTI_1562	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SYNGTI_1562	PWY-5723	Rubisco shunt
SYNGTI_1574	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
SYNGTI_1590	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
SYNGTI_1590	PWY-7205	CMP phosphorylation
SYNGTI_1591	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
SYNGTI_1591	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SYNGTI_1591	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SYNGTI_1591	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
SYNGTI_1592	PWY-6936	seleno-amino acid biosynthesis
SYNGTI_1592	PWY-7274	D-cycloserine biosynthesis
SYNGTI_1593	PWY-3801	sucrose degradation II (sucrose synthase)
SYNGTI_1593	PWY-5054	sorbitol biosynthesis I
SYNGTI_1593	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
SYNGTI_1593	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
SYNGTI_1593	PWY-5659	GDP-mannose biosynthesis
SYNGTI_1593	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SYNGTI_1593	PWY-621	sucrose degradation III (sucrose invertase)
SYNGTI_1593	PWY-622	starch biosynthesis
SYNGTI_1593	PWY-6531	mannitol cycle
SYNGTI_1593	PWY-6981	chitin biosynthesis
SYNGTI_1593	PWY-7238	sucrose biosynthesis II
SYNGTI_1593	PWY-7347	sucrose biosynthesis III
SYNGTI_1593	PWY-7385	1,3-propanediol biosynthesis (engineered)
SYNGTI_1594	PWY-5147	oleate biosynthesis I (plants)
SYNGTI_1596	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SYNGTI_1596	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SYNGTI_1615	PWY-6167	flavin biosynthesis II (archaea)
SYNGTI_1615	PWY-6168	flavin biosynthesis III (fungi)
SYNGTI_1615	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
SYNGTI_1633	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SYNGTI_1641	PWY-5958	acridone alkaloid biosynthesis
SYNGTI_1641	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
SYNGTI_1641	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
SYNGTI_1644	PWY-5874	heme degradation
SYNGTI_1644	PWY-5915	phycoerythrobilin biosynthesis I
SYNGTI_1644	PWY-5917	phycocyanobilin biosynthesis
SYNGTI_1644	PWY-7170	phytochromobilin biosynthesis
SYNGTI_1655	PWY-101	photosynthesis light reactions
SYNGTI_1655	PWY-6785	hydrogen production VIII
SYNGTI_1672	PWY-2301	<i>myo</i>-inositol biosynthesis
SYNGTI_1672	PWY-4702	phytate degradation I
SYNGTI_1672	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
SYNGTI_1677	PWY-5686	UMP biosynthesis
SYNGTI_1687	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SYNGTI_1687	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SYNGTI_1695	PWY-4041	&gamma;-glutamyl cycle
SYNGTI_1695	PWY-5826	hypoglycin biosynthesis
SYNGTI_1724	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
SYNGTI_1724	PWY-7177	UTP and CTP dephosphorylation II
SYNGTI_1724	PWY-7185	UTP and CTP dephosphorylation I
SYNGTI_1728	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
SYNGTI_1728	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SYNGTI_1736	PWY-6938	NADH repair
SYNGTI_1751	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SYNGTI_1751	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SYNGTI_1751	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SYNGTI_1759	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SYNGTI_1759	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SYNGTI_1759	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SYNGTI_1759	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SYNGTI_1759	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SYNGTI_1759	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SYNGTI_1759	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
SYNGTI_1759	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
SYNGTI_1760	PWY-5278	sulfite oxidation III
SYNGTI_1760	PWY-5340	sulfate activation for sulfonation
SYNGTI_1760	PWY-6683	sulfate reduction III (assimilatory)
SYNGTI_1760	PWY-6932	selenate reduction
SYNGTI_1765	PWY-6349	CDP-archaeol biosynthesis
SYNGTI_1776	PWY-4261	glycerol degradation I
SYNGTI_1776	PWY-6118	glycerol-3-phosphate shuttle
SYNGTI_1776	PWY-6952	glycerophosphodiester degradation
SYNGTI_1779	PWY-4261	glycerol degradation I
SYNGTI_1787	PWY-6454	vancomycin resistance I
SYNGTI_1787	PWY-6455	vancomycin resistance II
SYNGTI_1788	PWY-5101	L-isoleucine biosynthesis II
SYNGTI_1788	PWY-6871	3-methylbutanol biosynthesis
SYNGTI_1794	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
SYNGTI_1794	PWY-6853	ethylene biosynthesis II (microbes)
SYNGTI_1794	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
SYNGTI_1800	PWY-6832	2-aminoethylphosphonate degradation II
SYNGTI_1805	PWY-5392	reductive TCA cycle II
SYNGTI_1805	PWY-5537	pyruvate fermentation to acetate V
SYNGTI_1805	PWY-5538	pyruvate fermentation to acetate VI
SYNGTI_1805	PWY-5690	TCA cycle II (plants and fungi)
SYNGTI_1805	PWY-5913	TCA cycle VI (obligate autotrophs)
SYNGTI_1805	PWY-6728	methylaspartate cycle
SYNGTI_1805	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SYNGTI_1805	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SYNGTI_1806	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
SYNGTI_1806	PWY-6174	mevalonate pathway II (archaea)
SYNGTI_1806	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
SYNGTI_1806	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
SYNGTI_1806	PWY-7102	bisabolene biosynthesis
SYNGTI_1806	PWY-7391	isoprene biosynthesis II (engineered)
SYNGTI_1806	PWY-7524	mevalonate pathway III (archaea)
SYNGTI_1806	PWY-7560	methylerythritol phosphate pathway II
SYNGTI_1806	PWY-922	mevalonate pathway I
SYNGTI_1811	PWY-5381	pyridine nucleotide cycling (plants)
SYNGTI_1811	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
SYNGTI_1818	PWY-1622	formaldehyde assimilation I (serine pathway)
SYNGTI_1818	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
SYNGTI_1818	PWY-5913	TCA cycle VI (obligate autotrophs)
SYNGTI_1818	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SYNGTI_1818	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
SYNGTI_1818	PWY-6549	L-glutamine biosynthesis III
SYNGTI_1818	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SYNGTI_1818	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
SYNGTI_1818	PWY-7124	ethylene biosynthesis V (engineered)
SYNGTI_1821	PWY-5316	nicotine biosynthesis
SYNGTI_1821	PWY-5381	pyridine nucleotide cycling (plants)
SYNGTI_1821	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
SYNGTI_1821	PWY-7342	superpathway of nicotine biosynthesis
SYNGTI_1829	PWY-1042	glycolysis IV (plant cytosol)
SYNGTI_1829	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SYNGTI_1829	PWY-5484	glycolysis II (from fructose 6-phosphate)
SYNGTI_1829	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SYNGTI_1829	PWY-7385	1,3-propanediol biosynthesis (engineered)
SYNGTI_1833	PWY-4202	arsenate detoxification I (glutaredoxin)
SYNGTI_1833	PWY-4621	arsenate detoxification II (glutaredoxin)
SYNGTI_1843	PWY-7560	methylerythritol phosphate pathway II
SYNGTI_1844	PWY-5484	glycolysis II (from fructose 6-phosphate)
SYNGTI_1845	PWY-7238	sucrose biosynthesis II
SYNGTI_1845	PWY-7347	sucrose biosynthesis III
SYNGTI_1862	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
SYNGTI_1862	PWY-6148	tetrahydromethanopterin biosynthesis
SYNGTI_1862	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
SYNGTI_1862	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
SYNGTI_1883	PWY-5723	Rubisco shunt
SYNGTI_1884	PWY-101	photosynthesis light reactions
SYNGTI_1884	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
SYNGTI_1893	PWY-5269	cardiolipin biosynthesis II
SYNGTI_1893	PWY-5668	cardiolipin biosynthesis I
SYNGTI_1905	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SYNGTI_1909	PWY-6123	inosine-5'-phosphate biosynthesis I
SYNGTI_1909	PWY-6124	inosine-5'-phosphate biosynthesis II
SYNGTI_1909	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SYNGTI_1909	PWY-7234	inosine-5'-phosphate biosynthesis III
SYNGTI_1911	PWY-5704	urea degradation II
SYNGTI_1938	PWY-381	nitrate reduction II (assimilatory)
SYNGTI_1938	PWY-5675	nitrate reduction V (assimilatory)
SYNGTI_1938	PWY-6549	L-glutamine biosynthesis III
SYNGTI_1938	PWY-6963	ammonia assimilation cycle I
SYNGTI_1938	PWY-6964	ammonia assimilation cycle II
SYNGTI_1942	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SYNGTI_1949	PWY-1042	glycolysis IV (plant cytosol)
SYNGTI_1949	PWY-5484	glycolysis II (from fructose 6-phosphate)
SYNGTI_1949	PWY-6886	1-butanol autotrophic biosynthesis
SYNGTI_1949	PWY-6901	superpathway of glucose and xylose degradation
SYNGTI_1949	PWY-7003	glycerol degradation to butanol
SYNGTI_1958	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
SYNGTI_1958	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
SYNGTI_1958	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
SYNGTI_1960	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
SYNGTI_1967	PWY-5686	UMP biosynthesis
SYNGTI_2024	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SYNGTI_2024	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
SYNGTI_2024	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SYNGTI_2024	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
SYNGTI_2024	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
SYNGTI_2024	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SYNGTI_2024	PWY-7205	CMP phosphorylation
SYNGTI_2024	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SYNGTI_2024	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SYNGTI_2024	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
SYNGTI_2024	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SYNGTI_2024	PWY-7224	purine deoxyribonucleosides salvage
SYNGTI_2024	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
SYNGTI_2024	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
SYNGTI_2029	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
SYNGTI_2029	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
SYNGTI_2030	PWY-5667	CDP-diacylglycerol biosynthesis I
SYNGTI_2030	PWY-5981	CDP-diacylglycerol biosynthesis III
SYNGTI_2030	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
SYNGTI_2030	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
SYNGTI_2036	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
SYNGTI_2036	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
SYNGTI_2039	PWY-1042	glycolysis IV (plant cytosol)
SYNGTI_2039	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
SYNGTI_2039	PWY-5484	glycolysis II (from fructose 6-phosphate)
SYNGTI_2039	PWY-5723	Rubisco shunt
SYNGTI_2039	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SYNGTI_2039	PWY-6886	1-butanol autotrophic biosynthesis
SYNGTI_2039	PWY-6901	superpathway of glucose and xylose degradation
SYNGTI_2039	PWY-7003	glycerol degradation to butanol
SYNGTI_2039	PWY-7124	ethylene biosynthesis V (engineered)
SYNGTI_2039	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
SYNGTI_2047	PWY-6840	homoglutathione biosynthesis
SYNGTI_2047	PWY-7255	ergothioneine biosynthesis I (bacteria)
SYNGTI_2051	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
SYNGTI_2051	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
SYNGTI_2053	PWY-622	starch biosynthesis
SYNGTI_2063	PWY-6167	flavin biosynthesis II (archaea)
SYNGTI_2063	PWY-6168	flavin biosynthesis III (fungi)
SYNGTI_2063	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SYNGTI_2072	PWY-101	photosynthesis light reactions
SYNGTI_2072	PWY-6785	hydrogen production VIII
SYNGTI_2099	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SYNGTI_2099	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
SYNGTI_2099	PWY-5194	siroheme biosynthesis
SYNGTI_2099	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SYNGTI_2109	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
SYNGTI_2109	PWY-622	starch biosynthesis
SYNGTI_2113	PWY-5686	UMP biosynthesis
SYNGTI_2115	PWY-6871	3-methylbutanol biosynthesis
SYNGTI_2127	PWY-4381	fatty acid biosynthesis initiation I
SYNGTI_2127	PWY-5743	3-hydroxypropanoate cycle
SYNGTI_2127	PWY-5744	glyoxylate assimilation
SYNGTI_2127	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SYNGTI_2127	PWY-6679	jadomycin biosynthesis
SYNGTI_2127	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SYNGTI_2134	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SYNGTI_2134	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SYNGTI_2134	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
SYNGTI_2134	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
SYNGTI_2134	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SYNGTI_2134	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SYNGTI_2136	PWY-5386	methylglyoxal degradation I
SYNGTI_2144	PWY-6823	molybdenum cofactor biosynthesis
SYNGTI_2144	PWY-6891	thiazole biosynthesis II (Bacillus)
SYNGTI_2144	PWY-6892	thiazole biosynthesis I (E. coli)
SYNGTI_2144	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
SYNGTI_2149	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
SYNGTI_2149	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
SYNGTI_2167	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SYNGTI_2167	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SYNGTI_2167	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SYNGTI_2167	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
SYNGTI_2174	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
SYNGTI_2174	PWY-2201	folate transformations I
SYNGTI_2174	PWY-3841	folate transformations II
SYNGTI_2174	PWY-5030	L-histidine degradation III
SYNGTI_2174	PWY-5497	purine nucleobases degradation II (anaerobic)
SYNGTI_2174	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
SYNGTI_2179	PWY-1042	glycolysis IV (plant cytosol)
SYNGTI_2179	PWY-5484	glycolysis II (from fructose 6-phosphate)
SYNGTI_2179	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SYNGTI_2179	PWY-7003	glycerol degradation to butanol
SYNGTI_2193	PWY-7560	methylerythritol phosphate pathway II
SYNGTI_2217	PWY-7560	methylerythritol phosphate pathway II
SYNGTI_2218	PWY-1042	glycolysis IV (plant cytosol)
SYNGTI_2218	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SYNGTI_2218	PWY-5484	glycolysis II (from fructose 6-phosphate)
SYNGTI_2218	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SYNGTI_2218	PWY-7385	1,3-propanediol biosynthesis (engineered)
SYNGTI_2219	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SYNGTI_2224	PWY-5532	adenosine nucleotides degradation IV
SYNGTI_2224	PWY-5723	Rubisco shunt
SYNGTI_2226	PWY-5532	adenosine nucleotides degradation IV
SYNGTI_2226	PWY-5723	Rubisco shunt
SYNGTI_2233	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SYNGTI_2233	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SYNGTI_2234	PWY-5392	reductive TCA cycle II
SYNGTI_2234	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SYNGTI_2234	PWY-5690	TCA cycle II (plants and fungi)
SYNGTI_2234	PWY-5913	TCA cycle VI (obligate autotrophs)
SYNGTI_2234	PWY-6728	methylaspartate cycle
SYNGTI_2234	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SYNGTI_2234	PWY-7254	TCA cycle VII (acetate-producers)
SYNGTI_2234	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SYNGTI_2244	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
SYNGTI_2247	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
SYNGTI_2247	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
SYNGTI_2247	PWY-6269	adenosylcobalamin salvage from cobinamide II
SYNGTI_2250	PWY-6622	heptadecane biosynthesis
SYNGTI_2250	PWY-7032	alkane biosynthesis I
SYNGTI_2251	PWY-282	cuticular wax biosynthesis
SYNGTI_2251	PWY-6622	heptadecane biosynthesis
SYNGTI_2251	PWY-7032	alkane biosynthesis I
SYNGTI_2284	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
SYNGTI_2284	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
SYNGTI_2291	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SYNGTI_2291	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SYNGTI_2305	PWY-2201	folate transformations I
SYNGTI_2305	PWY-5497	purine nucleobases degradation II (anaerobic)
SYNGTI_2306	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
SYNGTI_2306	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SYNGTI_2306	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SYNGTI_2306	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
SYNGTI_2311	PWY-5101	L-isoleucine biosynthesis II
SYNGTI_2311	PWY-5103	L-isoleucine biosynthesis III
SYNGTI_2311	PWY-5104	L-isoleucine biosynthesis IV
SYNGTI_2311	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
SYNGTI_2311	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
SYNGTI_2311	PWY-6389	(<i>S</i>)-acetoin biosynthesis
SYNGTI_2311	PWY-7111	pyruvate fermentation to isobutanol (engineered)
SYNGTI_2314	PWY-7039	phosphatidate metabolism, as a signaling molecule
SYNGTI_2315	PWY-5958	acridone alkaloid biosynthesis
SYNGTI_2315	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
SYNGTI_2315	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
SYNGTI_2316	PWY-5068	chlorophyll cycle
SYNGTI_2316	PWY-5086	chlorophyll <i>a</i> biosynthesis I
SYNGTI_2348	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SYNGTI_2348	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
SYNGTI_2359	PWY-5659	GDP-mannose biosynthesis
SYNGTI_2359	PWY-6073	alginate biosynthesis I (algal)
SYNGTI_2359	PWY-6082	alginate biosynthesis II (bacterial)
SYNGTI_2359	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
SYNGTI_2362	PWY-6012	acyl carrier protein metabolism I
SYNGTI_2362	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
SYNGTI_2387	PWY-6891	thiazole biosynthesis II (Bacillus)
SYNGTI_2387	PWY-6892	thiazole biosynthesis I (E. coli)
SYNGTI_2391	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
SYNGTI_2391	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
SYNGTI_2391	PWY-6269	adenosylcobalamin salvage from cobinamide II
SYNGTI_2402	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
SYNGTI_2402	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
SYNGTI_2405	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SYNGTI_2405	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SYNGTI_2430	PWY-5194	siroheme biosynthesis
SYNGTI_2430	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SYNGTI_2439	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SYNGTI_2439	PWY-5686	UMP biosynthesis
SYNGTI_2439	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SYNGTI_2441	PWY-7183	pyrimidine nucleobases salvage I
SYNGTI_2442	PWY-5663	tetrahydrobiopterin biosynthesis I
SYNGTI_2442	PWY-5664	tetrahydrobiopterin biosynthesis II
SYNGTI_2442	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
SYNGTI_2442	PWY-6703	preQ<sub>0</sub> biosynthesis
SYNGTI_2442	PWY-6983	tetrahydrobiopterin biosynthesis III
SYNGTI_2442	PWY-7442	drosopterin and aurodrosopterin biosynthesis
SYNGTI_2449	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SYNGTI_2449	PWY-5723	Rubisco shunt
SYNGTI_2464	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
SYNGTI_2464	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
SYNGTI_2465	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SYNGTI_2466	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SYNGTI_2474	PWY-2201	folate transformations I
SYNGTI_2474	PWY-3841	folate transformations II
SYNGTI_2478	PWY-2201	folate transformations I
SYNGTI_2478	PWY-3841	folate transformations II
SYNGTI_2483	PWY-6788	cellulose degradation II (fungi)
SYNGTI_2484	PWY-6683	sulfate reduction III (assimilatory)
SYNGTI_2486	PWY-6823	molybdenum cofactor biosynthesis
SYNGTI_2487	PWY-6823	molybdenum cofactor biosynthesis
SYNGTI_2488	PWY-5964	guanylyl molybdenum cofactor biosynthesis
SYNGTI_2490	PWY-6823	molybdenum cofactor biosynthesis
SYNGTI_2501	PWY-6519	8-amino-7-oxononanoate biosynthesis I
SYNGTI_2501	PWY-6578	8-amino-7-oxononanoate biosynthesis III
SYNGTI_2501	PWY-7147	8-amino-7-oxononanoate biosynthesis II
SYNGTI_2505	PWY-5155	&beta;-alanine biosynthesis III
SYNGTI_2506	PWY-1622	formaldehyde assimilation I (serine pathway)
SYNGTI_2506	PWY-5392	reductive TCA cycle II
SYNGTI_2506	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SYNGTI_2506	PWY-5690	TCA cycle II (plants and fungi)
SYNGTI_2506	PWY-5913	TCA cycle VI (obligate autotrophs)
SYNGTI_2506	PWY-6728	methylaspartate cycle
SYNGTI_2506	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SYNGTI_2506	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SYNGTI_2506	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SYNGTI_2535	PWY-6672	<i>cis</i>-genanyl-CoA degradation
SYNGTI_2535	PWY-7118	chitin degradation to ethanol
SYNGTI_2547	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SYNGTI_2555	PWY-3221	dTDP-L-rhamnose biosynthesis II
SYNGTI_2555	PWY-6808	dTDP-D-forosamine biosynthesis
SYNGTI_2555	PWY-6942	dTDP-D-desosamine biosynthesis
SYNGTI_2555	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
SYNGTI_2555	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
SYNGTI_2555	PWY-6974	dTDP-L-olivose biosynthesis
SYNGTI_2555	PWY-6976	dTDP-L-mycarose biosynthesis
SYNGTI_2555	PWY-7104	dTDP-L-megosamine biosynthesis
SYNGTI_2555	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
SYNGTI_2555	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
SYNGTI_2555	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
SYNGTI_2555	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
SYNGTI_2555	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
SYNGTI_2555	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
SYNGTI_2555	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
SYNGTI_2555	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
SYNGTI_2558	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SYNGTI_2558	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SYNGTI_2558	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SYNGTI_2561	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
SYNGTI_2570	PWY-3781	aerobic respiration I (cytochrome c)
SYNGTI_2570	PWY-4302	aerobic respiration III (alternative oxidase pathway)
SYNGTI_2570	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SYNGTI_2570	PWY-5690	TCA cycle II (plants and fungi)
SYNGTI_2570	PWY-6728	methylaspartate cycle
SYNGTI_2570	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SYNGTI_2570	PWY-7254	TCA cycle VII (acetate-producers)
SYNGTI_2570	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SYNGTI_2582	PWY-6823	molybdenum cofactor biosynthesis
SYNGTI_2582	PWY-6891	thiazole biosynthesis II (Bacillus)
SYNGTI_2582	PWY-6892	thiazole biosynthesis I (E. coli)
SYNGTI_2582	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
SYNGTI_2586	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
SYNGTI_2594	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SYNGTI_2594	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SYNGTI_2620	PWY-5097	L-lysine biosynthesis VI
SYNGTI_2635	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SYNGTI_2635	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SYNGTI_2635	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SYNGTI_2636	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
SYNGTI_2636	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
SYNGTI_2636	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
SYNGTI_2642	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
SYNGTI_2643	PWY-6700	queuosine biosynthesis
SYNGTI_2645	PWY-6167	flavin biosynthesis II (archaea)
SYNGTI_2648	PWY-2723	trehalose degradation V
SYNGTI_2648	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
SYNGTI_2648	PWY-5661	GDP-glucose biosynthesis
SYNGTI_2648	PWY-7238	sucrose biosynthesis II
SYNGTI_2648	PWY-7385	1,3-propanediol biosynthesis (engineered)
SYNGTI_2658	PWY-1042	glycolysis IV (plant cytosol)
SYNGTI_2658	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
SYNGTI_2658	PWY-5484	glycolysis II (from fructose 6-phosphate)
SYNGTI_2658	PWY-5723	Rubisco shunt
SYNGTI_2658	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SYNGTI_2658	PWY-6886	1-butanol autotrophic biosynthesis
SYNGTI_2658	PWY-6901	superpathway of glucose and xylose degradation
SYNGTI_2658	PWY-7003	glycerol degradation to butanol
SYNGTI_2658	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
SYNGTI_2658	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SYNGTI_2663	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
SYNGTI_2665	PWY-3461	L-tyrosine biosynthesis II
SYNGTI_2665	PWY-3462	L-phenylalanine biosynthesis II
SYNGTI_2665	PWY-6120	L-tyrosine biosynthesis III
SYNGTI_2665	PWY-6627	salinosporamide A biosynthesis
SYNGTI_2669	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
SYNGTI_2669	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
SYNGTI_2669	PWY-7242	D-fructuronate degradation
SYNGTI_2669	PWY-7310	D-glucosaminate degradation
SYNGTI_2678	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SYNGTI_2690	PWY-5917	phycocyanobilin biosynthesis
SYNGTI_2693	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
SYNGTI_2704	PWY-5484	glycolysis II (from fructose 6-phosphate)
SYNGTI_2730	PWY-5381	pyridine nucleotide cycling (plants)
SYNGTI_2793	PWY-6700	queuosine biosynthesis
SYNGTI_2800	PWY-6700	queuosine biosynthesis
SYNGTI_2804	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SYNGTI_2804	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
SYNGTI_2804	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SYNGTI_2806	PWY-1042	glycolysis IV (plant cytosol)
SYNGTI_2806	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SYNGTI_2806	PWY-5484	glycolysis II (from fructose 6-phosphate)
SYNGTI_2806	PWY-7385	1,3-propanediol biosynthesis (engineered)
SYNGTI_2828	PWY-5057	L-valine degradation II
SYNGTI_2828	PWY-5076	L-leucine degradation III
SYNGTI_2828	PWY-5078	L-isoleucine degradation II
SYNGTI_2828	PWY-5101	L-isoleucine biosynthesis II
SYNGTI_2828	PWY-5103	L-isoleucine biosynthesis III
SYNGTI_2828	PWY-5104	L-isoleucine biosynthesis IV
SYNGTI_2828	PWY-5108	L-isoleucine biosynthesis V
SYNGTI_2830	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
SYNGTI_2831	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
SYNGTI_2831	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
SYNGTI_2831	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
SYNGTI_2834	PWY-6475	<i>trans</i>-lycopene biosynthesis II (plants)
SYNGTI_2837	PWY-1281	sulfoacetaldehyde degradation I
SYNGTI_2837	PWY-5482	pyruvate fermentation to acetate II
SYNGTI_2837	PWY-5485	pyruvate fermentation to acetate IV
SYNGTI_2837	PWY-5497	purine nucleobases degradation II (anaerobic)
SYNGTI_2837	PWY-6637	sulfolactate degradation II
SYNGTI_2848	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
SYNGTI_2848	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
SYNGTI_2849	PWY-6654	phosphopantothenate biosynthesis III
SYNGTI_2850	PWY-6703	preQ<sub>0</sub> biosynthesis
SYNGTI_2860	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
SYNGTI_2860	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
SYNGTI_2867	PWY-2941	L-lysine biosynthesis II
SYNGTI_2867	PWY-2942	L-lysine biosynthesis III
SYNGTI_2867	PWY-5097	L-lysine biosynthesis VI
SYNGTI_2883	PWY-4981	L-proline biosynthesis II (from arginine)
SYNGTI_2883	PWY-4984	urea cycle
SYNGTI_2883	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SYNGTI_2884	PWY-6123	inosine-5'-phosphate biosynthesis I
SYNGTI_2884	PWY-7234	inosine-5'-phosphate biosynthesis III
SYNGTI_2887	PWY-101	photosynthesis light reactions
SYNGTI_2887	PWY-6785	hydrogen production VIII
SYNGTI_2892	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
SYNGTI_2905	PWY-2941	L-lysine biosynthesis II
SYNGTI_2905	PWY-2942	L-lysine biosynthesis III
SYNGTI_2905	PWY-5097	L-lysine biosynthesis VI
SYNGTI_2905	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SYNGTI_2905	PWY-6559	spermidine biosynthesis II
SYNGTI_2905	PWY-6562	norspermidine biosynthesis
SYNGTI_2905	PWY-7153	grixazone biosynthesis
SYNGTI_2905	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SYNGTI_2906	PWY-2941	L-lysine biosynthesis II
SYNGTI_2906	PWY-2942	L-lysine biosynthesis III
SYNGTI_2906	PWY-5097	L-lysine biosynthesis VI
SYNGTI_2913	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SYNGTI_2922	PWY-5686	UMP biosynthesis
SYNGTI_2928	PWY-1042	glycolysis IV (plant cytosol)
SYNGTI_2928	PWY-5484	glycolysis II (from fructose 6-phosphate)
SYNGTI_2928	PWY-6901	superpathway of glucose and xylose degradation
SYNGTI_2928	PWY-7003	glycerol degradation to butanol
SYNGTI_2929	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SYNGTI_2929	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SYNGTI_2930	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SYNGTI_2930	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SYNGTI_2936	PWY-4981	L-proline biosynthesis II (from arginine)
SYNGTI_2961	PWY-5101	L-isoleucine biosynthesis II
SYNGTI_2961	PWY-5103	L-isoleucine biosynthesis III
SYNGTI_2961	PWY-5104	L-isoleucine biosynthesis IV
SYNGTI_2961	PWY-7111	pyruvate fermentation to isobutanol (engineered)
SYNGTI_2964	PWY-5316	nicotine biosynthesis
SYNGTI_2964	PWY-7342	superpathway of nicotine biosynthesis
SYNGTI_2971	PWY-2941	L-lysine biosynthesis II
SYNGTI_2971	PWY-2942	L-lysine biosynthesis III
SYNGTI_2971	PWY-5097	L-lysine biosynthesis VI
SYNGTI_2971	PWY-6559	spermidine biosynthesis II
SYNGTI_2971	PWY-6562	norspermidine biosynthesis
SYNGTI_2971	PWY-7153	grixazone biosynthesis
SYNGTI_2974	PWY-3341	L-proline biosynthesis III
SYNGTI_2974	PWY-4981	L-proline biosynthesis II (from arginine)
SYNGTI_2974	PWY-6344	L-ornithine degradation II (Stickland reaction)
SYNGTI_2975	PWY-621	sucrose degradation III (sucrose invertase)
SYNGTI_2978	PWY-40	putrescine biosynthesis I
SYNGTI_2978	PWY-43	putrescine biosynthesis II
SYNGTI_2978	PWY-6305	putrescine biosynthesis IV
SYNGTI_2978	PWY-6834	spermidine biosynthesis III
SYNGTI_2980	PWY-5316	nicotine biosynthesis
SYNGTI_2980	PWY-7342	superpathway of nicotine biosynthesis
SYNGTI_2984	PWY-5747	2-methylcitrate cycle II
SYNGTI_2990	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SYNGTI_2990	PWY-5686	UMP biosynthesis
SYNGTI_2990	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SYNGTI_2992	PWY-6749	CMP-legionaminate biosynthesis I
SYNGTI_2994	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SYNGTI_3021	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
SYNGTI_3021	PWY-6855	chitin degradation I (archaea)
SYNGTI_3021	PWY-6906	chitin derivatives degradation
SYNGTI_3036	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
SYNGTI_3036	PWY-622	starch biosynthesis
SYNGTI_3038	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
SYNGTI_3038	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
SYNGTI_3039	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
SYNGTI_3039	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
SYNGTI_3042	PWY-1042	glycolysis IV (plant cytosol)
SYNGTI_3042	PWY-1622	formaldehyde assimilation I (serine pathway)
SYNGTI_3042	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
SYNGTI_3042	PWY-5484	glycolysis II (from fructose 6-phosphate)
SYNGTI_3042	PWY-5723	Rubisco shunt
SYNGTI_3042	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SYNGTI_3042	PWY-6886	1-butanol autotrophic biosynthesis
SYNGTI_3042	PWY-6901	superpathway of glucose and xylose degradation
SYNGTI_3042	PWY-7003	glycerol degradation to butanol
SYNGTI_3042	PWY-7124	ethylene biosynthesis V (engineered)
SYNGTI_3042	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
SYNGTI_3043	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
SYNGTI_3043	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SYNGTI_3043	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SYNGTI_3043	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
SYNGTI_3047	PWY-4381	fatty acid biosynthesis initiation I
SYNGTI_3047	PWY-5743	3-hydroxypropanoate cycle
SYNGTI_3047	PWY-5744	glyoxylate assimilation
SYNGTI_3047	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SYNGTI_3047	PWY-6679	jadomycin biosynthesis
SYNGTI_3047	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SYNGTI_3052	PWY-2723	trehalose degradation V
SYNGTI_3052	PWY-3801	sucrose degradation II (sucrose synthase)
SYNGTI_3052	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
SYNGTI_3052	PWY-5661	GDP-glucose biosynthesis
SYNGTI_3052	PWY-5661-1	SYNGTI_3052|pgm|YP_005384814.1|GeneID:11975786
SYNGTI_3052	PWY-5940	streptomycin biosynthesis
SYNGTI_3052	PWY-5941	glycogen degradation II (eukaryotic)
SYNGTI_3052	PWY-622	starch biosynthesis
SYNGTI_3052	PWY-6731	starch degradation III
SYNGTI_3052	PWY-6737	starch degradation V
SYNGTI_3052	PWY-6749	CMP-legionaminate biosynthesis I
SYNGTI_3052	PWY-7238	sucrose biosynthesis II
SYNGTI_3052	PWY-7343	UDP-glucose biosynthesis
SYNGTI_3068	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SYNGTI_3068	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
SYNGTI_3068	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
SYNGTI_3068	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SYNGTI_3078	PWY-2941	L-lysine biosynthesis II
SYNGTI_3078	PWY-5097	L-lysine biosynthesis VI
SYNGTI_3088	PWY-3781	aerobic respiration I (cytochrome c)
SYNGTI_3088	PWY-4521	arsenite oxidation I (respiratory)
SYNGTI_3088	PWY-6692	Fe(II) oxidation
SYNGTI_3088	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SYNGTI_3100	PWY-5101	L-isoleucine biosynthesis II
SYNGTI_3100	PWY-5103	L-isoleucine biosynthesis III
SYNGTI_3100	PWY-5104	L-isoleucine biosynthesis IV
SYNGTI_3100	PWY-7111	pyruvate fermentation to isobutanol (engineered)
SYNGTI_3115	PWY-622	starch biosynthesis
SYNGTI_3121	PWY-5381	pyridine nucleotide cycling (plants)
SYNGTI_3121	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
SYNGTI_3121	PWY-6596	adenosine nucleotides degradation I
SYNGTI_3121	PWY-6606	guanosine nucleotides degradation II
SYNGTI_3121	PWY-6607	guanosine nucleotides degradation I
SYNGTI_3121	PWY-6608	guanosine nucleotides degradation III
SYNGTI_3121	PWY-7185	UTP and CTP dephosphorylation I
SYNGTI_3122	PWY-101	photosynthesis light reactions
SYNGTI_3122	PWY-6785	hydrogen production VIII
SYNGTI_3123	PWY-6825	phosphatidylcholine biosynthesis V
SYNGTI_3125	PWY-5350	thiosulfate disproportionation III (rhodanese)
SYNGTI_3126	PWY-101	photosynthesis light reactions
SYNGTI_3126	PWY-6785	hydrogen production VIII
SYNGTI_3134	PWY-4983	L-citrulline-nitric oxide cycle
SYNGTI_3134	PWY-4984	urea cycle
SYNGTI_3134	PWY-5	canavanine biosynthesis
SYNGTI_3134	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SYNGTI_3134	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SYNGTI_3145	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SYNGTI_3145	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SYNGTI_3145	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SYNGTI_3145	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SYNGTI_3145	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SYNGTI_3145	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SYNGTI_3145	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
SYNGTI_3145	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
SYNGTI_3153	PWY-6167	flavin biosynthesis II (archaea)
SYNGTI_3154	PWY-6123	inosine-5'-phosphate biosynthesis I
SYNGTI_3154	PWY-6124	inosine-5'-phosphate biosynthesis II
SYNGTI_3154	PWY-7234	inosine-5'-phosphate biosynthesis III
SYNGTI_3165	PWY-4061	glutathione-mediated detoxification I
SYNGTI_3165	PWY-6842	glutathione-mediated detoxification II
SYNGTI_3165	PWY-7112	4-hydroxy-2-nonenal detoxification
SYNGTI_3165	PWY-7533	gliotoxin biosynthesis
