Swol_0007	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
Swol_0008	PWY-6832	2-aminoethylphosphonate degradation II
Swol_0010	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Swol_0040	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Swol_0040	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Swol_0040	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swol_0040	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Swol_0040	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Swol_0040	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Swol_0064	PWY-7560	methylerythritol phosphate pathway II
Swol_0067	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Swol_0097	PWY-6614	tetrahydrofolate biosynthesis
Swol_0098	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Swol_0098	PWY-6148	tetrahydromethanopterin biosynthesis
Swol_0098	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Swol_0098	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Swol_0099	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Swol_0099	PWY-6148	tetrahydromethanopterin biosynthesis
Swol_0099	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Swol_0099	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Swol_0101	PWY-6654	phosphopantothenate biosynthesis III
Swol_0103	PWY-5155	&beta;-alanine biosynthesis III
Swol_0104	PWY-5316	nicotine biosynthesis
Swol_0104	PWY-7342	superpathway of nicotine biosynthesis
Swol_0105	PWY-5316	nicotine biosynthesis
Swol_0105	PWY-7342	superpathway of nicotine biosynthesis
Swol_0107	PWY-5316	nicotine biosynthesis
Swol_0107	PWY-5381	pyridine nucleotide cycling (plants)
Swol_0107	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Swol_0107	PWY-7342	superpathway of nicotine biosynthesis
Swol_0109	PWY-3961	phosphopantothenate biosynthesis II
Swol_0124	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Swol_0124	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Swol_0124	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Swol_0184	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Swol_0201	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Swol_0201	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Swol_0210	PWY-6143	CMP-pseudaminate biosynthesis
Swol_0212	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Swol_0212	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Swol_0212	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Swol_0212	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Swol_0243	PWY-6891	thiazole biosynthesis II (Bacillus)
Swol_0243	PWY-6892	thiazole biosynthesis I (E. coli)
Swol_0243	PWY-7560	methylerythritol phosphate pathway II
Swol_0260	PWY-3801	sucrose degradation II (sucrose synthase)
Swol_0260	PWY-3861	mannitol degradation II
Swol_0260	PWY-3881	mannitol biosynthesis
Swol_0260	PWY-5054	sorbitol biosynthesis I
Swol_0260	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Swol_0260	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Swol_0260	PWY-5659	GDP-mannose biosynthesis
Swol_0260	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Swol_0260	PWY-621	sucrose degradation III (sucrose invertase)
Swol_0260	PWY-622	starch biosynthesis
Swol_0260	PWY-6531	mannitol cycle
Swol_0260	PWY-6981	chitin biosynthesis
Swol_0260	PWY-7238	sucrose biosynthesis II
Swol_0260	PWY-7347	sucrose biosynthesis III
Swol_0260	PWY-7385	1,3-propanediol biosynthesis (engineered)
Swol_0260	PWY-7456	mannan degradation
Swol_0260	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Swol_0272	PWY-1042	glycolysis IV (plant cytosol)
Swol_0272	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swol_0272	PWY-6901	superpathway of glucose and xylose degradation
Swol_0272	PWY-7003	glycerol degradation to butanol
Swol_0273	PWY-1042	glycolysis IV (plant cytosol)
Swol_0273	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swol_0273	PWY-6886	1-butanol autotrophic biosynthesis
Swol_0273	PWY-6901	superpathway of glucose and xylose degradation
Swol_0273	PWY-7003	glycerol degradation to butanol
Swol_0274	PWY-1042	glycolysis IV (plant cytosol)
Swol_0274	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swol_0274	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Swol_0274	PWY-7003	glycerol degradation to butanol
Swol_0275	PWY-1042	glycolysis IV (plant cytosol)
Swol_0275	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Swol_0275	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swol_0275	PWY-5723	Rubisco shunt
Swol_0275	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Swol_0275	PWY-6886	1-butanol autotrophic biosynthesis
Swol_0275	PWY-6901	superpathway of glucose and xylose degradation
Swol_0275	PWY-7003	glycerol degradation to butanol
Swol_0275	PWY-7124	ethylene biosynthesis V (engineered)
Swol_0275	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Swol_0276	PWY-1042	glycolysis IV (plant cytosol)
Swol_0276	PWY-1622	formaldehyde assimilation I (serine pathway)
Swol_0276	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Swol_0276	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swol_0276	PWY-5723	Rubisco shunt
Swol_0276	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Swol_0276	PWY-6886	1-butanol autotrophic biosynthesis
Swol_0276	PWY-6901	superpathway of glucose and xylose degradation
Swol_0276	PWY-7003	glycerol degradation to butanol
Swol_0276	PWY-7124	ethylene biosynthesis V (engineered)
Swol_0276	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Swol_0307	PWY-1361	benzoyl-CoA degradation I (aerobic)
Swol_0307	PWY-5109	2-methylbutanoate biosynthesis
Swol_0307	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Swol_0307	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Swol_0307	PWY-5177	glutaryl-CoA degradation
Swol_0307	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swol_0307	PWY-6435	4-hydroxybenzoate biosynthesis V
Swol_0307	PWY-6583	pyruvate fermentation to butanol I
Swol_0307	PWY-6863	pyruvate fermentation to hexanol
Swol_0307	PWY-6883	pyruvate fermentation to butanol II
Swol_0307	PWY-6944	androstenedione degradation
Swol_0307	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Swol_0307	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Swol_0307	PWY-7007	methyl ketone biosynthesis
Swol_0307	PWY-7046	4-coumarate degradation (anaerobic)
Swol_0307	PWY-7094	fatty acid salvage
Swol_0307	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Swol_0307	PWY-735	jasmonic acid biosynthesis
Swol_0307	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Swol_0356	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Swol_0356	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Swol_0356	PWY-6268	adenosylcobalamin salvage from cobalamin
Swol_0356	PWY-6269	adenosylcobalamin salvage from cobinamide II
Swol_0363	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Swol_0363	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Swol_0363	PWY-6164	3-dehydroquinate biosynthesis I
Swol_0364	PWY-5958	acridone alkaloid biosynthesis
Swol_0364	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Swol_0364	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Swol_0373	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Swol_0375	PWY-3081	L-lysine biosynthesis V
Swol_0375	PWY-6871	3-methylbutanol biosynthesis
Swol_0378	PWY-5913	TCA cycle VI (obligate autotrophs)
Swol_0378	PWY-6549	L-glutamine biosynthesis III
Swol_0378	PWY-6728	methylaspartate cycle
Swol_0378	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Swol_0378	PWY-7124	ethylene biosynthesis V (engineered)
Swol_0378	PWY-7254	TCA cycle VII (acetate-producers)
Swol_0378	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Swol_0380	PWY-2201	folate transformations I
Swol_0380	PWY-3841	folate transformations II
Swol_0417	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Swol_0417	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Swol_0419	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Swol_0419	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Swol_0422	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Swol_0422	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Swol_0435	PWY-1361	benzoyl-CoA degradation I (aerobic)
Swol_0435	PWY-5109	2-methylbutanoate biosynthesis
Swol_0435	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Swol_0435	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Swol_0435	PWY-5177	glutaryl-CoA degradation
Swol_0435	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swol_0435	PWY-6435	4-hydroxybenzoate biosynthesis V
Swol_0435	PWY-6583	pyruvate fermentation to butanol I
Swol_0435	PWY-6863	pyruvate fermentation to hexanol
Swol_0435	PWY-6883	pyruvate fermentation to butanol II
Swol_0435	PWY-6944	androstenedione degradation
Swol_0435	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Swol_0435	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Swol_0435	PWY-7007	methyl ketone biosynthesis
Swol_0435	PWY-7046	4-coumarate degradation (anaerobic)
Swol_0435	PWY-7094	fatty acid salvage
Swol_0435	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Swol_0435	PWY-735	jasmonic acid biosynthesis
Swol_0435	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Swol_0449	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swol_0449	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swol_0454	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Swol_0519	PWY-5750	itaconate biosynthesis
Swol_0519	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Swol_0519	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Swol_0520	PWY-6317	galactose degradation I (Leloir pathway)
Swol_0520	PWY-6527	stachyose degradation
Swol_0522	PWY-6317	galactose degradation I (Leloir pathway)
Swol_0522	PWY-6527	stachyose degradation
Swol_0523	PWY-5269	cardiolipin biosynthesis II
Swol_0523	PWY-5668	cardiolipin biosynthesis I
Swol_0524	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Swol_0527	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Swol_0528	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Swol_0529	PWY-6164	3-dehydroquinate biosynthesis I
Swol_0544	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Swol_0544	PWY-6416	quinate degradation II
Swol_0544	PWY-6707	gallate biosynthesis
Swol_0566	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Swol_0566	PWY-2201	folate transformations I
Swol_0566	PWY-3841	folate transformations II
Swol_0566	PWY-5030	L-histidine degradation III
Swol_0566	PWY-5497	purine nucleobases degradation II (anaerobic)
Swol_0566	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Swol_0582	PWY-6891	thiazole biosynthesis II (Bacillus)
Swol_0582	PWY-6892	thiazole biosynthesis I (E. coli)
Swol_0582	PWY-7560	methylerythritol phosphate pathway II
Swol_0584	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Swol_0584	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Swol_0584	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Swol_0591	PWY-6898	thiamin salvage III
Swol_0591	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Swol_0591	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Swol_0594	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Swol_0594	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Swol_0594	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Swol_0608	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Swol_0609	PWY-7181	pyrimidine deoxyribonucleosides degradation
Swol_0612	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Swol_0612	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Swol_0619	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Swol_0639	PWY-6910	hydroxymethylpyrimidine salvage
Swol_0639	PWY-7356	thiamin salvage IV (yeast)
Swol_0639	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Swol_0640	PWY-6897	thiamin salvage II
Swol_0640	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Swol_0640	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Swol_0641	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Swol_0641	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Swol_0641	PWY-6897	thiamin salvage II
Swol_0641	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Swol_0641	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Swol_0641	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Swol_0641	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Swol_0643	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Swol_0646	PWY-5663	tetrahydrobiopterin biosynthesis I
Swol_0646	PWY-5664	tetrahydrobiopterin biosynthesis II
Swol_0646	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Swol_0646	PWY-6703	preQ<sub>0</sub> biosynthesis
Swol_0646	PWY-6983	tetrahydrobiopterin biosynthesis III
Swol_0646	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Swol_0667	PWY-40	putrescine biosynthesis I
Swol_0667	PWY-43	putrescine biosynthesis II
Swol_0667	PWY-6305	putrescine biosynthesis IV
Swol_0667	PWY-6834	spermidine biosynthesis III
Swol_0669	PWY-40	putrescine biosynthesis I
Swol_0669	PWY-6305	putrescine biosynthesis IV
Swol_0674	PWY-6834	spermidine biosynthesis III
Swol_0683	PWY-5194	siroheme biosynthesis
Swol_0683	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Swol_0684	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Swol_0685	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Swol_0685	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Swol_0687	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Swol_0687	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Swol_0687	PWY-5194	siroheme biosynthesis
Swol_0687	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Swol_0690	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Swol_0690	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Swol_0694	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Swol_0707	PWY-3821	galactose degradation III
Swol_0707	PWY-6317	galactose degradation I (Leloir pathway)
Swol_0707	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Swol_0707	PWY-6527	stachyose degradation
Swol_0707	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Swol_0707	PWY-7344	UDP-D-galactose biosynthesis
Swol_0726	PWY-3821	galactose degradation III
Swol_0726	PWY-6317	galactose degradation I (Leloir pathway)
Swol_0726	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Swol_0726	PWY-6527	stachyose degradation
Swol_0726	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Swol_0726	PWY-7344	UDP-D-galactose biosynthesis
Swol_0728	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Swol_0731	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Swol_0731	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Swol_0731	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Swol_0767	PWY-1281	sulfoacetaldehyde degradation I
Swol_0767	PWY-5482	pyruvate fermentation to acetate II
Swol_0767	PWY-5485	pyruvate fermentation to acetate IV
Swol_0767	PWY-5497	purine nucleobases degradation II (anaerobic)
Swol_0767	PWY-6637	sulfolactate degradation II
Swol_0768	PWY-5482	pyruvate fermentation to acetate II
Swol_0768	PWY-5485	pyruvate fermentation to acetate IV
Swol_0768	PWY-5497	purine nucleobases degradation II (anaerobic)
Swol_0775	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Swol_0775	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Swol_0779	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
Swol_0779	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Swol_0791	PWY-1361	benzoyl-CoA degradation I (aerobic)
Swol_0791	PWY-5109	2-methylbutanoate biosynthesis
Swol_0791	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Swol_0791	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Swol_0791	PWY-5177	glutaryl-CoA degradation
Swol_0791	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swol_0791	PWY-6435	4-hydroxybenzoate biosynthesis V
Swol_0791	PWY-6583	pyruvate fermentation to butanol I
Swol_0791	PWY-6863	pyruvate fermentation to hexanol
Swol_0791	PWY-6883	pyruvate fermentation to butanol II
Swol_0791	PWY-6944	androstenedione degradation
Swol_0791	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Swol_0791	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Swol_0791	PWY-7007	methyl ketone biosynthesis
Swol_0791	PWY-7046	4-coumarate degradation (anaerobic)
Swol_0791	PWY-7094	fatty acid salvage
Swol_0791	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Swol_0791	PWY-735	jasmonic acid biosynthesis
Swol_0791	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Swol_0801	PWY-6823	molybdenum cofactor biosynthesis
Swol_0802	PWY-6823	molybdenum cofactor biosynthesis
Swol_0809	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Swol_0809	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Swol_0809	PWY-6164	3-dehydroquinate biosynthesis I
Swol_0810	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Swol_0815	PWY-1341	phenylacetate degradation II (anaerobic)
Swol_0815	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Swol_0822	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swol_0822	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swol_0823	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Swol_0823	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Swol_0823	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Swol_0824	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swol_0824	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swol_0826	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Swol_0826	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Swol_0826	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Swol_0826	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Swol_0827	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swol_0827	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swol_0828	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swol_0828	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swol_0852	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Swol_0889	PWY-7560	methylerythritol phosphate pathway II
Swol_0891	PWY-7560	methylerythritol phosphate pathway II
Swol_0904	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Swol_0904	PWY-6167	flavin biosynthesis II (archaea)
Swol_0904	PWY-6168	flavin biosynthesis III (fungi)
Swol_0909	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Swol_0909	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Swol_0911	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Swol_0911	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Swol_0911	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swol_0911	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Swol_0916	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Swol_0916	PWY-6596	adenosine nucleotides degradation I
Swol_0916	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Swol_0930	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Swol_0933	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Swol_0933	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Swol_0933	PWY-6936	seleno-amino acid biosynthesis
Swol_0933	PWY-702	L-methionine biosynthesis II
Swol_0934	PWY-2201	folate transformations I
Swol_0934	PWY-3841	folate transformations II
Swol_0938	PWY-4621	arsenate detoxification II (glutaredoxin)
Swol_0940	PWY-2942	L-lysine biosynthesis III
Swol_0953	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Swol_0955	PWY-3341	L-proline biosynthesis III
Swol_0955	PWY-4981	L-proline biosynthesis II (from arginine)
Swol_0955	PWY-6344	L-ornithine degradation II (Stickland reaction)
Swol_0979	PWY-2781	<i>cis</i>-zeatin biosynthesis
Swol_1007	PWY-381	nitrate reduction II (assimilatory)
Swol_1007	PWY-5675	nitrate reduction V (assimilatory)
Swol_1007	PWY-6549	L-glutamine biosynthesis III
Swol_1007	PWY-6963	ammonia assimilation cycle I
Swol_1007	PWY-6964	ammonia assimilation cycle II
Swol_1013	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swol_1013	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swol_1015	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swol_1015	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swol_1020	PWY-5198	factor 420 biosynthesis
Swol_1020	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Swol_1022	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Swol_1026	PWY-6823	molybdenum cofactor biosynthesis
Swol_1031	PWY-5669	phosphatidylethanolamine biosynthesis I
Swol_1048	PWY-5480	pyruvate fermentation to ethanol I
Swol_1048	PWY-5485	pyruvate fermentation to acetate IV
Swol_1048	PWY-5493	reductive monocarboxylic acid cycle
Swol_1085	PWY-6012	acyl carrier protein metabolism I
Swol_1085	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Swol_1096	PWY-7456	mannan degradation
Swol_1101	PWY-7193	pyrimidine ribonucleosides salvage I
Swol_1112	PWY-7199	pyrimidine deoxyribonucleosides salvage
Swol_1128	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Swol_1144	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Swol_1144	PWY-5143	long-chain fatty acid activation
Swol_1144	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
Swol_1144	PWY-5885	wax esters biosynthesis II
Swol_1144	PWY-5972	stearate biosynthesis I (animals and fungi)
Swol_1144	PWY-5995	linoleate biosynthesis I (plants)
Swol_1144	PWY-6000	&gamma;-linolenate biosynthesis II (animals)
Swol_1144	PWY-6001	linoleate biosynthesis II (animals)
Swol_1144	PWY-6803	phosphatidylcholine acyl editing
Swol_1144	PWY-6873	long chain fatty acid ester synthesis for microdiesel production
Swol_1144	PWY-6920	6-gingerol analog biosynthesis
Swol_1144	PWY-6951	Swol_1144
Swol_1144	PWY-7033	alkane biosynthesis II
Swol_1144	PWY-7035	(<i>Z</i>)-9-tricosene biosynthesis
Swol_1144	PWY-7049	icosapentaenoate biosynthesis II (metazoa)
Swol_1144	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Swol_1144	PWY-7094	fatty acid salvage
Swol_1144	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
Swol_1150	PWY-5381	pyridine nucleotide cycling (plants)
Swol_1150	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Swol_1150	PWY-6596	adenosine nucleotides degradation I
Swol_1150	PWY-6606	guanosine nucleotides degradation II
Swol_1150	PWY-6607	guanosine nucleotides degradation I
Swol_1150	PWY-6608	guanosine nucleotides degradation III
Swol_1150	PWY-7185	UTP and CTP dephosphorylation I
Swol_1155	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swol_1155	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swol_1157	PWY-5198	factor 420 biosynthesis
Swol_1157	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
Swol_1157	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
Swol_1158	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
Swol_1158	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
Swol_1159	PWY-5198	factor 420 biosynthesis
Swol_1170	PWY-1042	glycolysis IV (plant cytosol)
Swol_1170	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Swol_1170	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swol_1170	PWY-7385	1,3-propanediol biosynthesis (engineered)
Swol_1171	PWY-1361	benzoyl-CoA degradation I (aerobic)
Swol_1171	PWY-5109	2-methylbutanoate biosynthesis
Swol_1171	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Swol_1171	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Swol_1171	PWY-5177	glutaryl-CoA degradation
Swol_1171	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swol_1171	PWY-6435	4-hydroxybenzoate biosynthesis V
Swol_1171	PWY-6583	pyruvate fermentation to butanol I
Swol_1171	PWY-6863	pyruvate fermentation to hexanol
Swol_1171	PWY-6883	pyruvate fermentation to butanol II
Swol_1171	PWY-6944	androstenedione degradation
Swol_1171	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Swol_1171	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Swol_1171	PWY-7007	methyl ketone biosynthesis
Swol_1171	PWY-7046	4-coumarate degradation (anaerobic)
Swol_1171	PWY-7094	fatty acid salvage
Swol_1171	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Swol_1171	PWY-735	jasmonic acid biosynthesis
Swol_1171	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Swol_1181	PWY-6654	phosphopantothenate biosynthesis III
Swol_1209	PWY-6123	inosine-5'-phosphate biosynthesis I
Swol_1209	PWY-6124	inosine-5'-phosphate biosynthesis II
Swol_1209	PWY-7234	inosine-5'-phosphate biosynthesis III
Swol_1219	PWY-6167	flavin biosynthesis II (archaea)
Swol_1219	PWY-6168	flavin biosynthesis III (fungi)
Swol_1220	PWY-6167	flavin biosynthesis II (archaea)
Swol_1220	PWY-6168	flavin biosynthesis III (fungi)
Swol_1220	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Swol_1221	PWY-6167	flavin biosynthesis II (archaea)
Swol_1221	PWY-6168	flavin biosynthesis III (fungi)
Swol_1221	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Swol_1223	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Swol_1223	PWY-5723	Rubisco shunt
Swol_1234	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Swol_1234	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Swol_1237	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Swol_1249	PWY-7533	gliotoxin biosynthesis
Swol_1261	PWY-5269	cardiolipin biosynthesis II
Swol_1261	PWY-5668	cardiolipin biosynthesis I
Swol_1269	PWY-2941	L-lysine biosynthesis II
Swol_1269	PWY-2942	L-lysine biosynthesis III
Swol_1269	PWY-5097	L-lysine biosynthesis VI
Swol_1270	PWY-2941	L-lysine biosynthesis II
Swol_1270	PWY-2942	L-lysine biosynthesis III
Swol_1270	PWY-5097	L-lysine biosynthesis VI
Swol_1270	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Swol_1270	PWY-6559	spermidine biosynthesis II
Swol_1270	PWY-6562	norspermidine biosynthesis
Swol_1270	PWY-7153	grixazone biosynthesis
Swol_1270	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Swol_1273	PWY-2941	L-lysine biosynthesis II
Swol_1273	PWY-2942	L-lysine biosynthesis III
Swol_1273	PWY-5097	L-lysine biosynthesis VI
Swol_1277	PWY-5686	UMP biosynthesis
Swol_1278	PWY-5686	UMP biosynthesis
Swol_1281	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Swol_1281	PWY-5686	UMP biosynthesis
Swol_1281	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Swol_1282	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Swol_1282	PWY-5686	UMP biosynthesis
Swol_1282	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Swol_1283	PWY-5686	UMP biosynthesis
Swol_1284	PWY-5686	UMP biosynthesis
Swol_1285	PWY-7183	pyrimidine nucleobases salvage I
Swol_1294	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Swol_1294	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Swol_1301	PWY-1042	glycolysis IV (plant cytosol)
Swol_1301	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Swol_1301	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swol_1301	PWY-5723	Rubisco shunt
Swol_1301	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Swol_1301	PWY-6886	1-butanol autotrophic biosynthesis
Swol_1301	PWY-6901	superpathway of glucose and xylose degradation
Swol_1301	PWY-7003	glycerol degradation to butanol
Swol_1301	PWY-7124	ethylene biosynthesis V (engineered)
Swol_1301	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Swol_1317	PWY-2941	L-lysine biosynthesis II
Swol_1317	PWY-2942	L-lysine biosynthesis III
Swol_1317	PWY-5097	L-lysine biosynthesis VI
Swol_1317	PWY-6559	spermidine biosynthesis II
Swol_1317	PWY-6562	norspermidine biosynthesis
Swol_1317	PWY-7153	grixazone biosynthesis
Swol_1318	PWY-702	L-methionine biosynthesis II
Swol_1323	PWY-5667	CDP-diacylglycerol biosynthesis I
Swol_1323	PWY-5981	CDP-diacylglycerol biosynthesis III
Swol_1341	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
Swol_1341	PWY-6174	mevalonate pathway II (archaea)
Swol_1341	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
Swol_1341	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
Swol_1341	PWY-7102	bisabolene biosynthesis
Swol_1341	PWY-7391	isoprene biosynthesis II (engineered)
Swol_1341	PWY-7524	mevalonate pathway III (archaea)
Swol_1341	PWY-7560	methylerythritol phosphate pathway II
Swol_1341	PWY-922	mevalonate pathway I
Swol_1344	PWY-7560	methylerythritol phosphate pathway II
Swol_1346	PWY-7205	CMP phosphorylation
Swol_1347	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Swol_1348	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Swol_1348	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Swol_1348	PWY-6164	3-dehydroquinate biosynthesis I
Swol_1350	PWY-7052	cyanophycin metabolism
Swol_1351	PWY-7052	cyanophycin metabolism
Swol_1381	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Swol_1381	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Swol_1381	PWY-6164	3-dehydroquinate biosynthesis I
Swol_1388	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Swol_1388	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Swol_1388	PWY-6164	3-dehydroquinate biosynthesis I
Swol_1395	PWY-3461	L-tyrosine biosynthesis II
Swol_1395	PWY-3462	L-phenylalanine biosynthesis II
Swol_1395	PWY-6120	L-tyrosine biosynthesis III
Swol_1395	PWY-6627	salinosporamide A biosynthesis
Swol_1405	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Swol_1405	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Swol_1405	PWY-6269	adenosylcobalamin salvage from cobinamide II
Swol_1408	PWY-5663	tetrahydrobiopterin biosynthesis I
Swol_1408	PWY-5664	tetrahydrobiopterin biosynthesis II
Swol_1408	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Swol_1408	PWY-6703	preQ<sub>0</sub> biosynthesis
Swol_1408	PWY-6983	tetrahydrobiopterin biosynthesis III
Swol_1408	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Swol_1409	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Swol_1409	PWY-2161	folate polyglutamylation
Swol_1409	PWY-2201	folate transformations I
Swol_1409	PWY-3841	folate transformations II
Swol_1422	PWY-2941	L-lysine biosynthesis II
Swol_1422	PWY-2942	L-lysine biosynthesis III
Swol_1422	PWY-5097	L-lysine biosynthesis VI
Swol_1428	PWY-6700	queuosine biosynthesis
Swol_1429	PWY-6700	queuosine biosynthesis
Swol_1438	PWY-6936	seleno-amino acid biosynthesis
Swol_1474	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Swol_1474	PWY-2201	folate transformations I
Swol_1474	PWY-3841	folate transformations II
Swol_1474	PWY-5030	L-histidine degradation III
Swol_1474	PWY-5497	purine nucleobases degradation II (anaerobic)
Swol_1474	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Swol_1485	PWY-1361	benzoyl-CoA degradation I (aerobic)
Swol_1485	PWY-5109	2-methylbutanoate biosynthesis
Swol_1485	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Swol_1485	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Swol_1485	PWY-5177	glutaryl-CoA degradation
Swol_1485	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swol_1485	PWY-6435	4-hydroxybenzoate biosynthesis V
Swol_1485	PWY-6583	pyruvate fermentation to butanol I
Swol_1485	PWY-6863	pyruvate fermentation to hexanol
Swol_1485	PWY-6883	pyruvate fermentation to butanol II
Swol_1485	PWY-6944	androstenedione degradation
Swol_1485	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Swol_1485	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Swol_1485	PWY-7007	methyl ketone biosynthesis
Swol_1485	PWY-7046	4-coumarate degradation (anaerobic)
Swol_1485	PWY-7094	fatty acid salvage
Swol_1485	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Swol_1485	PWY-735	jasmonic acid biosynthesis
Swol_1485	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Swol_1493	PWY-6829	tRNA methylation (yeast)
Swol_1493	PWY-7285	methylwyosine biosynthesis
Swol_1493	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Swol_1512	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Swol_1512	PWY-6549	L-glutamine biosynthesis III
Swol_1512	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Swol_1512	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Swol_1521	PWY-5674	nitrate reduction IV (dissimilatory)
Swol_1560	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Swol_1562	PWY-6556	pyrimidine ribonucleosides salvage II
Swol_1562	PWY-7181	pyrimidine deoxyribonucleosides degradation
Swol_1562	PWY-7193	pyrimidine ribonucleosides salvage I
Swol_1562	PWY-7199	pyrimidine deoxyribonucleosides salvage
Swol_1563	PWY-7039	phosphatidate metabolism, as a signaling molecule
Swol_1603	PWY-5381	pyridine nucleotide cycling (plants)
Swol_1603	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Swol_1605	PWY-6936	seleno-amino acid biosynthesis
Swol_1648	PWY-2161	folate polyglutamylation
Swol_1650	PWY-5669	phosphatidylethanolamine biosynthesis I
Swol_1693	PWY-6823	molybdenum cofactor biosynthesis
Swol_1711	PWY-6854	ethylene biosynthesis III (microbes)
Swol_1774	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Swol_1774	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Swol_1774	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Swol_1775	PWY-6123	inosine-5'-phosphate biosynthesis I
Swol_1775	PWY-6124	inosine-5'-phosphate biosynthesis II
Swol_1775	PWY-7234	inosine-5'-phosphate biosynthesis III
Swol_1776	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Swol_1776	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Swol_1777	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Swol_1777	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Swol_1777	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Swol_1778	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Swol_1778	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Swol_1778	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Swol_1778	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Swol_1779	PWY-6123	inosine-5'-phosphate biosynthesis I
Swol_1779	PWY-6124	inosine-5'-phosphate biosynthesis II
Swol_1779	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Swol_1779	PWY-7234	inosine-5'-phosphate biosynthesis III
Swol_1780	PWY-6123	inosine-5'-phosphate biosynthesis I
Swol_1780	PWY-7234	inosine-5'-phosphate biosynthesis III
Swol_1784	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Swol_1785	PWY-6599	guanine and guanosine salvage II
Swol_1785	PWY-6609	adenine and adenosine salvage III
Swol_1785	PWY-6610	adenine and adenosine salvage IV
Swol_1785	PWY-6620	guanine and guanosine salvage
Swol_1787	PWY-381	nitrate reduction II (assimilatory)
Swol_1787	PWY-5675	nitrate reduction V (assimilatory)
Swol_1787	PWY-6549	L-glutamine biosynthesis III
Swol_1787	PWY-6963	ammonia assimilation cycle I
Swol_1787	PWY-6964	ammonia assimilation cycle II
Swol_1792	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
Swol_1792	PWY-581	indole-3-acetate biosynthesis II
Swol_1792	PWY-7308	acrylonitrile degradation I
Swol_1827	PWY-6823	molybdenum cofactor biosynthesis
Swol_1845	PWY-4381	fatty acid biosynthesis initiation I
Swol_1845	PWY-5743	3-hydroxypropanoate cycle
Swol_1845	PWY-5744	glyoxylate assimilation
Swol_1845	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swol_1845	PWY-6679	jadomycin biosynthesis
Swol_1845	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Swol_1846	PWY-4381	fatty acid biosynthesis initiation I
Swol_1846	PWY-5743	3-hydroxypropanoate cycle
Swol_1846	PWY-5744	glyoxylate assimilation
Swol_1846	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swol_1846	PWY-6679	jadomycin biosynthesis
Swol_1846	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Swol_1847	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Swol_1847	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Swol_1847	PWY-5989	stearate biosynthesis II (bacteria and plants)
Swol_1847	PWY-5994	palmitate biosynthesis I (animals and fungi)
Swol_1847	PWY-6113	superpathway of mycolate biosynthesis
Swol_1847	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Swol_1847	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Swol_1847	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Swol_1847	PWYG-321	mycolate biosynthesis
Swol_1850	PWY-5367	petroselinate biosynthesis
Swol_1850	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Swol_1850	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Swol_1850	PWY-5989	stearate biosynthesis II (bacteria and plants)
Swol_1850	PWY-5994	palmitate biosynthesis I (animals and fungi)
Swol_1850	PWY-6113	superpathway of mycolate biosynthesis
Swol_1850	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Swol_1850	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Swol_1850	PWY-6951	Swol_1850
Swol_1850	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Swol_1850	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Swol_1850	PWYG-321	mycolate biosynthesis
Swol_1851	PWY-4381	fatty acid biosynthesis initiation I
Swol_1851	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Swol_1851	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Swol_1852	PWY-723	alkylnitronates degradation
Swol_1853	PWY-4381	fatty acid biosynthesis initiation I
Swol_1854	PWY-723	alkylnitronates degradation
Swol_1860	PWY-6823	molybdenum cofactor biosynthesis
Swol_1882	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Swol_1884	PWY-6938	NADH repair
Swol_1885	PWY-6012	acyl carrier protein metabolism I
Swol_1885	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Swol_1907	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Swol_1907	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Swol_1907	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swol_1907	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Swol_1912	PWY-6823	molybdenum cofactor biosynthesis
Swol_1912	PWY-6891	thiazole biosynthesis II (Bacillus)
Swol_1912	PWY-6892	thiazole biosynthesis I (E. coli)
Swol_1912	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Swol_1914	PWY-5659	GDP-mannose biosynthesis
Swol_1914	PWY-6073	alginate biosynthesis I (algal)
Swol_1914	PWY-6082	alginate biosynthesis II (bacterial)
Swol_1914	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Swol_1915	PWY-6749	CMP-legionaminate biosynthesis I
Swol_1926	PWY-6759	hydrogen production III
Swol_1926	PWY-6785	hydrogen production VIII
Swol_1935	PWY-1361	benzoyl-CoA degradation I (aerobic)
Swol_1935	PWY-5109	2-methylbutanoate biosynthesis
Swol_1935	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Swol_1935	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Swol_1935	PWY-5177	glutaryl-CoA degradation
Swol_1935	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swol_1935	PWY-6435	4-hydroxybenzoate biosynthesis V
Swol_1935	PWY-6583	pyruvate fermentation to butanol I
Swol_1935	PWY-6863	pyruvate fermentation to hexanol
Swol_1935	PWY-6883	pyruvate fermentation to butanol II
Swol_1935	PWY-6944	androstenedione degradation
Swol_1935	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Swol_1935	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Swol_1935	PWY-7007	methyl ketone biosynthesis
Swol_1935	PWY-7046	4-coumarate degradation (anaerobic)
Swol_1935	PWY-7094	fatty acid salvage
Swol_1935	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Swol_1935	PWY-735	jasmonic acid biosynthesis
Swol_1935	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Swol_1966	PWY-6788	cellulose degradation II (fungi)
Swol_1974	PWY-6984	lipoate salvage II
Swol_1974	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Swol_1974	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Swol_1978	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Swol_1978	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Swol_2021	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Swol_2030	PWY-1361	benzoyl-CoA degradation I (aerobic)
Swol_2030	PWY-5109	2-methylbutanoate biosynthesis
Swol_2030	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Swol_2030	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Swol_2030	PWY-5177	glutaryl-CoA degradation
Swol_2030	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Swol_2030	PWY-6435	4-hydroxybenzoate biosynthesis V
Swol_2030	PWY-6583	pyruvate fermentation to butanol I
Swol_2030	PWY-6863	pyruvate fermentation to hexanol
Swol_2030	PWY-6883	pyruvate fermentation to butanol II
Swol_2030	PWY-6944	androstenedione degradation
Swol_2030	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Swol_2030	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Swol_2030	PWY-7007	methyl ketone biosynthesis
Swol_2030	PWY-7046	4-coumarate degradation (anaerobic)
Swol_2030	PWY-7094	fatty acid salvage
Swol_2030	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Swol_2030	PWY-735	jasmonic acid biosynthesis
Swol_2030	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Swol_2040	PWY-1042	glycolysis IV (plant cytosol)
Swol_2040	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Swol_2040	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swol_2040	PWY-5723	Rubisco shunt
Swol_2040	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Swol_2040	PWY-6886	1-butanol autotrophic biosynthesis
Swol_2040	PWY-6901	superpathway of glucose and xylose degradation
Swol_2040	PWY-7003	glycerol degradation to butanol
Swol_2040	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Swol_2040	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Swol_2041	PWY-1042	glycolysis IV (plant cytosol)
Swol_2041	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Swol_2041	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swol_2041	PWY-7385	1,3-propanediol biosynthesis (engineered)
Swol_2099	PWY-6749	CMP-legionaminate biosynthesis I
Swol_2100	PWY-6749	CMP-legionaminate biosynthesis I
Swol_2104	PWY-6898	thiamin salvage III
Swol_2104	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Swol_2104	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Swol_2139	PWY-5101	L-isoleucine biosynthesis II
Swol_2139	PWY-6871	3-methylbutanol biosynthesis
Swol_2140	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Swol_2143	PWY-6871	3-methylbutanol biosynthesis
Swol_2144	PWY-5101	L-isoleucine biosynthesis II
Swol_2144	PWY-5103	L-isoleucine biosynthesis III
Swol_2144	PWY-5104	L-isoleucine biosynthesis IV
Swol_2144	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Swol_2145	PWY-5101	L-isoleucine biosynthesis II
Swol_2145	PWY-5103	L-isoleucine biosynthesis III
Swol_2145	PWY-5104	L-isoleucine biosynthesis IV
Swol_2145	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Swol_2145	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Swol_2145	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Swol_2145	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Swol_2146	PWY-5101	L-isoleucine biosynthesis II
Swol_2146	PWY-5103	L-isoleucine biosynthesis III
Swol_2146	PWY-5104	L-isoleucine biosynthesis IV
Swol_2146	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Swol_2146	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Swol_2146	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Swol_2146	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Swol_2147	PWY-5101	L-isoleucine biosynthesis II
Swol_2147	PWY-5103	L-isoleucine biosynthesis III
Swol_2147	PWY-5104	L-isoleucine biosynthesis IV
Swol_2147	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Swol_2148	PWY-5057	L-valine degradation II
Swol_2148	PWY-5076	L-leucine degradation III
Swol_2148	PWY-5078	L-isoleucine degradation II
Swol_2148	PWY-5101	L-isoleucine biosynthesis II
Swol_2148	PWY-5103	L-isoleucine biosynthesis III
Swol_2148	PWY-5104	L-isoleucine biosynthesis IV
Swol_2148	PWY-5108	L-isoleucine biosynthesis V
Swol_2154	PWY-6749	CMP-legionaminate biosynthesis I
Swol_2273	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swol_2273	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swol_2273	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Swol_2287	PWY-4981	L-proline biosynthesis II (from arginine)
Swol_2287	PWY-4984	urea cycle
Swol_2287	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Swol_2289	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Swol_2289	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Swol_2290	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Swol_2291	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Swol_2291	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Swol_2312	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Swol_2353	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Swol_2356	PWY-6936	seleno-amino acid biosynthesis
Swol_2356	PWY-7274	D-cycloserine biosynthesis
Swol_2357	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Swol_2360	PWY-7560	methylerythritol phosphate pathway II
Swol_2361	PWY-7560	methylerythritol phosphate pathway II
Swol_2377	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swol_2377	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swol_2382	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Swol_2384	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Swol_2391	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Swol_2392	PWY-1622	formaldehyde assimilation I (serine pathway)
Swol_2392	PWY-181	photorespiration
Swol_2392	PWY-2161	folate polyglutamylation
Swol_2392	PWY-2201	folate transformations I
Swol_2392	PWY-3661	glycine betaine degradation I
Swol_2392	PWY-3661-1	glycine betaine degradation II (mammalian)
Swol_2392	PWY-3841	folate transformations II
Swol_2392	PWY-5497	purine nucleobases degradation II (anaerobic)
Swol_2408	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Swol_2409	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swol_2410	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Swol_2410	PWY-5723	Rubisco shunt
Swol_2411	PWY-1042	glycolysis IV (plant cytosol)
Swol_2411	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Swol_2411	PWY-5484	glycolysis II (from fructose 6-phosphate)
Swol_2411	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Swol_2411	PWY-7385	1,3-propanediol biosynthesis (engineered)
Swol_2416	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Swol_2418	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Swol_2418	PWY-7177	UTP and CTP dephosphorylation II
Swol_2418	PWY-7185	UTP and CTP dephosphorylation I
Swol_2452	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Swol_2452	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Swol_2452	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Swol_2452	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Swol_2459	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Swol_2469	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Swol_2469	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Swol_2533	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Swol_2542	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
