Theco_0011 PWY-6784 cellulose and hemicellulose degradation (cellulolosome) Theco_0017 PWY-6683 sulfate reduction III (assimilatory) Theco_0018 PWY-6683 sulfate reduction III (assimilatory) Theco_0050 PWY-7254 TCA cycle VII (acetate-producers) Theco_0096 PWY-3781 aerobic respiration I (cytochrome c) Theco_0096 PWY-4521 arsenite oxidation I (respiratory) Theco_0096 PWY-6692 Fe(II) oxidation Theco_0096 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Theco_0105 PWY-2941 L-lysine biosynthesis II Theco_0105 PWY-2942 L-lysine biosynthesis III Theco_0105 PWY-5097 L-lysine biosynthesis VI Theco_0105 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Theco_0105 PWY-6559 spermidine biosynthesis II Theco_0105 PWY-6562 norspermidine biosynthesis Theco_0105 PWY-7153 grixazone biosynthesis Theco_0105 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Theco_0166 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Theco_0166 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Theco_0169 PWY-6143 CMP-pseudaminate biosynthesis Theco_0180 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Theco_0180 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Theco_0181 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Theco_0182 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Theco_0182 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Theco_0184 PWY-4981 L-proline biosynthesis II (from arginine) Theco_0184 PWY-4984 urea cycle Theco_0184 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Theco_0185 PWY-4983 L-citrulline-nitric oxide cycle Theco_0185 PWY-4984 urea cycle Theco_0185 PWY-5 canavanine biosynthesis Theco_0185 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Theco_0185 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Theco_0186 PWY-4983 L-citrulline-nitric oxide cycle Theco_0186 PWY-4984 urea cycle Theco_0186 PWY-5 canavanine biosynthesis Theco_0186 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Theco_0186 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Theco_0243 PWY-5669 phosphatidylethanolamine biosynthesis I Theco_0247 PWY-7560 methylerythritol phosphate pathway II Theco_0248 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Theco_0249 PWY-6936 seleno-amino acid biosynthesis Theco_0249 PWY-7274 D-cycloserine biosynthesis Theco_0302 PWY-7219 adenosine ribonucleotides de novo biosynthesis Theco_0315 PWY-5278 sulfite oxidation III Theco_0315 PWY-5340 sulfate activation for sulfonation Theco_0315 PWY-6683 sulfate reduction III (assimilatory) Theco_0315 PWY-6932 selenate reduction Theco_0339 PWY-1622 formaldehyde assimilation I (serine pathway) Theco_0339 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Theco_0339 PWY-5913 TCA cycle VI (obligate autotrophs) Theco_0339 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Theco_0339 PWY-6146 Methanobacterium thermoautotrophicum biosynthetic metabolism Theco_0339 PWY-6549 L-glutamine biosynthesis III Theco_0339 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Theco_0339 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Theco_0339 PWY-7124 ethylene biosynthesis V (engineered) Theco_0344 PWY-6749 CMP-legionaminate biosynthesis I Theco_0345 PWY-6749 CMP-legionaminate biosynthesis I Theco_0382 PWY-6482 diphthamide biosynthesis (archaea) Theco_0382 PWY-7546 diphthamide biosynthesis (eukaryotes) Theco_0386 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Theco_0386 PWY-5723 Rubisco shunt Theco_0387 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Theco_0387 PWY-5723 Rubisco shunt Theco_0387 PWY-6891 thiazole biosynthesis II (Bacillus) Theco_0387 PWY-6892 thiazole biosynthesis I (E. coli) Theco_0387 PWY-6901 superpathway of glucose and xylose degradation Theco_0387 PWY-7560 methylerythritol phosphate pathway II Theco_0388 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Theco_0397 PWY-101 photosynthesis light reactions Theco_0397 PWY-7230 ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic) Theco_0402 PWY-4261 glycerol degradation I Theco_0402 PWY-6118 glycerol-3-phosphate shuttle Theco_0402 PWY-6952 glycerophosphodiester degradation Theco_0427 PWY-5101 L-isoleucine biosynthesis II Theco_0427 PWY-5103 L-isoleucine biosynthesis III Theco_0427 PWY-5104 L-isoleucine biosynthesis IV Theco_0427 PWY-7111 pyruvate fermentation to isobutanol (engineered) Theco_0461 PWY-6807 xyloglucan degradation II (exoglucanase) Theco_0495 PWY-5344 L-homocysteine biosynthesis Theco_0495 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Theco_0500 PWY-6527 stachyose degradation Theco_0501 PWY-7456 mannan degradation Theco_0515 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Theco_0515 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation Theco_0515 PWY-7242 D-fructuronate degradation Theco_0515 PWY-7310 D-glucosaminate degradation Theco_0516 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation Theco_0518 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation Theco_0520 PWY-4261 glycerol degradation I Theco_0542 PWY-7242 D-fructuronate degradation Theco_0545 PWY-3781 aerobic respiration I (cytochrome c) Theco_0545 PWY-4521 arsenite oxidation I (respiratory) Theco_0545 PWY-6692 Fe(II) oxidation Theco_0545 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Theco_0555 PWY-6788 cellulose degradation II (fungi) Theco_0557 PWY-6807 xyloglucan degradation II (exoglucanase) Theco_0570 PWY-6012 acyl carrier protein metabolism I Theco_0570 PWY-6012-1 acyl carrier protein metabolism II (mammalian) Theco_0573 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Theco_0573 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Theco_0573 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Theco_0585 PWY-5484 glycolysis II (from fructose 6-phosphate) Theco_0586 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Theco_0586 PWY-7176 UTP and CTP de novo biosynthesis Theco_0586 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Theco_0586 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Theco_0586 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Theco_0586 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Theco_0586 PWY-7205 CMP phosphorylation Theco_0586 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Theco_0586 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Theco_0586 PWY-7221 guanosine ribonucleotides de novo biosynthesis Theco_0586 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Theco_0586 PWY-7224 purine deoxyribonucleosides salvage Theco_0586 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Theco_0586 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Theco_0612 PWY-2201 folate transformations I Theco_0612 PWY-5497 purine nucleobases degradation II (anaerobic) Theco_0613 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Theco_0613 PWY-5723 Rubisco shunt Theco_0613 PWY-6891 thiazole biosynthesis II (Bacillus) Theco_0613 PWY-6892 thiazole biosynthesis I (E. coli) Theco_0613 PWY-6901 superpathway of glucose and xylose degradation Theco_0613 PWY-7560 methylerythritol phosphate pathway II Theco_0615 PWY-3801 sucrose degradation II (sucrose synthase) Theco_0615 PWY-5054 sorbitol biosynthesis I Theco_0615 PWY-5384 sucrose degradation IV (sucrose phosphorylase) Theco_0615 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Theco_0615 PWY-5659 GDP-mannose biosynthesis Theco_0615 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Theco_0615 PWY-621 sucrose degradation III (sucrose invertase) Theco_0615 PWY-622 starch biosynthesis Theco_0615 PWY-6531 mannitol cycle Theco_0615 PWY-6981 chitin biosynthesis Theco_0615 PWY-7238 sucrose biosynthesis II Theco_0615 PWY-7347 sucrose biosynthesis III Theco_0615 PWY-7385 1,3-propanediol biosynthesis (engineered) Theco_0618 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Theco_0618 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Theco_0618 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Theco_0654 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Theco_0655 PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde Theco_0655 PWY-6309 L-tryptophan degradation XI (mammalian, via kynurenine) Theco_0672 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Theco_0673 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Theco_0673 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Theco_0673 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Theco_0691 PWY-6784 cellulose and hemicellulose degradation (cellulolosome) Theco_0729 PWY-6823 molybdenum cofactor biosynthesis Theco_0730 PWY-5964 guanylyl molybdenum cofactor biosynthesis Theco_0781 PWY-6784 cellulose and hemicellulose degradation (cellulolosome) Theco_0783 PWY-6784 cellulose and hemicellulose degradation (cellulolosome) Theco_0817 PWY-6938 NADH repair Theco_0872 PWY-5198 factor 420 biosynthesis Theco_0872 PWY-7371 1,4-dihydroxy-6-naphthoate biosynthesis II Theco_0872 PWY-7374 1,4-dihydroxy-6-naphthoate biosynthesis I Theco_0925 PWY-6807 xyloglucan degradation II (exoglucanase) Theco_0949 PWY-3121 linamarin degradation Theco_0949 PWY-5176 coumarin biosynthesis (via 2-coumarate) Theco_0949 PWY-6002 lotaustralin degradation Theco_0949 PWY-6788 cellulose degradation II (fungi) Theco_0949 PWY-7089 taxiphyllin bioactivation Theco_0949 PWY-7091 linustatin bioactivation Theco_0949 PWY-7092 neolinustatin bioactivation Theco_0952 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II Theco_0956 PWY-3821 galactose degradation III Theco_0956 PWY-6317 galactose degradation I (Leloir pathway) Theco_0956 PWY-6527 stachyose degradation Theco_0957 PWY-3821 galactose degradation III Theco_0957 PWY-6317 galactose degradation I (Leloir pathway) Theco_0957 PWY-6397 mycolyl-arabinogalactan-peptidoglycan complex biosynthesis Theco_0957 PWY-6527 stachyose degradation Theco_0957 PWY-7328 superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis Theco_0957 PWY-7344 UDP-D-galactose biosynthesis Theco_0958 PWY-6317 galactose degradation I (Leloir pathway) Theco_0958 PWY-6527 stachyose degradation Theco_0988 PWY-6961 L-ascorbate degradation II (bacterial, aerobic) Theco_0989 PWY-4261 glycerol degradation I Theco_0999 PWY-7456 mannan degradation Theco_1002 PWY-3861 mannitol degradation II Theco_1002 PWY-3881 mannitol biosynthesis Theco_1002 PWY-5659 GDP-mannose biosynthesis Theco_1002 PWY-7456 mannan degradation Theco_1002 PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) Theco_1015 PWY-5101 L-isoleucine biosynthesis II Theco_1015 PWY-5103 L-isoleucine biosynthesis III Theco_1015 PWY-5104 L-isoleucine biosynthesis IV Theco_1015 PWY-5938 (R)-acetoin biosynthesis I Theco_1015 PWY-5939 (R)-acetoin biosynthesis II Theco_1015 PWY-6389 (S)-acetoin biosynthesis Theco_1015 PWY-7111 pyruvate fermentation to isobutanol (engineered) Theco_1016 PWY-5101 L-isoleucine biosynthesis II Theco_1016 PWY-5103 L-isoleucine biosynthesis III Theco_1016 PWY-5104 L-isoleucine biosynthesis IV Theco_1016 PWY-5938 (R)-acetoin biosynthesis I Theco_1016 PWY-5939 (R)-acetoin biosynthesis II Theco_1016 PWY-6389 (S)-acetoin biosynthesis Theco_1016 PWY-7111 pyruvate fermentation to isobutanol (engineered) Theco_1017 PWY-5101 L-isoleucine biosynthesis II Theco_1017 PWY-5103 L-isoleucine biosynthesis III Theco_1017 PWY-5104 L-isoleucine biosynthesis IV Theco_1017 PWY-7111 pyruvate fermentation to isobutanol (engineered) Theco_1018 PWY-6871 3-methylbutanol biosynthesis Theco_1019 PWY-7396 butanol and isobutanol biosynthesis (engineered) Theco_1025 PWY-5988 wound-induced proteolysis I Theco_1025 PWY-6018 seed germination protein turnover Theco_1039 PWY-5162 2-oxopentenoate degradation Theco_1049 PWY-5041 S-adenosyl-L-methionine cycle II Theco_1049 PWY-6151 S-adenosyl-L-methionine cycle I Theco_1049 PWY-6936 seleno-amino acid biosynthesis Theco_1049 PWY-702 L-methionine biosynthesis II Theco_1072 PWY-6807 xyloglucan degradation II (exoglucanase) Theco_1087 PWY-7242 D-fructuronate degradation Theco_1094 PWY-2941 L-lysine biosynthesis II Theco_1094 PWY-2942 L-lysine biosynthesis III Theco_1094 PWY-5097 L-lysine biosynthesis VI Theco_1118 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Theco_1118 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Theco_1118 PWY-6268 adenosylcobalamin salvage from cobalamin Theco_1118 PWY-6269 adenosylcobalamin salvage from cobinamide II Theco_1135 PWY-5669 phosphatidylethanolamine biosynthesis I Theco_1137 PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis Theco_1139 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Theco_1139 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Theco_1139 PWY-6897 thiamin salvage II Theco_1139 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Theco_1139 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Theco_1139 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) Theco_1139 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Theco_1140 PWY-6891 thiazole biosynthesis II (Bacillus) Theco_1140 PWY-6892 thiazole biosynthesis I (E. coli) Theco_1142 PWY-6910 hydroxymethylpyrimidine salvage Theco_1142 PWY-7356 thiamin salvage IV (yeast) Theco_1142 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Theco_1149 PWY-3221 dTDP-L-rhamnose biosynthesis II Theco_1149 PWY-6808 dTDP-D-forosamine biosynthesis Theco_1149 PWY-6942 dTDP-D-desosamine biosynthesis Theco_1149 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis Theco_1149 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis Theco_1149 PWY-6974 dTDP-L-olivose biosynthesis Theco_1149 PWY-6976 dTDP-L-mycarose biosynthesis Theco_1149 PWY-7104 dTDP-L-megosamine biosynthesis Theco_1149 PWY-7301 dTDP-β-L-noviose biosynthesis Theco_1149 PWY-7312 dTDP-D-β-fucofuranose biosynthesis Theco_1149 PWY-7315 dTDP-N-acetylthomosamine biosynthesis Theco_1149 PWY-7316 dTDP-N-acetylviosamine biosynthesis Theco_1149 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis Theco_1149 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis Theco_1149 PWY-7414 dTDP-α-D-mycaminose biosynthesis Theco_1149 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis Theco_1159 PWY-7335 UDP-N-acetyl-α-D-mannosaminouronate biosynthesis Theco_1166 PWY-4381 fatty acid biosynthesis initiation I Theco_1196 PWY-3781 aerobic respiration I (cytochrome c) Theco_1196 PWY-4521 arsenite oxidation I (respiratory) Theco_1196 PWY-6692 Fe(II) oxidation Theco_1196 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Theco_1214 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Theco_1214 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Theco_1241 PWY-6906 chitin derivatives degradation Theco_1241 PWY-7077 N-acetyl-D-galactosamine degradation Theco_1241 PWY-7395 D-galactosamine and N-acetyl-D-galactosamine degradation Theco_1242 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Theco_1242 PWY-6855 chitin degradation I (archaea) Theco_1242 PWY-6906 chitin derivatives degradation Theco_1248 PWY-2723 trehalose degradation V Theco_1248 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Theco_1248 PWY-5661 GDP-glucose biosynthesis Theco_1248 PWY-7238 sucrose biosynthesis II Theco_1248 PWY-7385 1,3-propanediol biosynthesis (engineered) Theco_1251 PWY-7247 β-D-glucuronide and D-glucuronate degradation Theco_1251 PWY-7248 pectin degradation III Theco_1264 PWY-4261 glycerol degradation I Theco_1278 PWY-6891 thiazole biosynthesis II (Bacillus) Theco_1278 PWY-6892 thiazole biosynthesis I (E. coli) Theco_1278 PWY-7560 methylerythritol phosphate pathway II Theco_1280 PWY-4261 glycerol degradation I Theco_1294 PWY-5392 reductive TCA cycle II Theco_1294 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Theco_1294 PWY-5690 TCA cycle II (plants and fungi) Theco_1294 PWY-5913 TCA cycle VI (obligate autotrophs) Theco_1294 PWY-6728 methylaspartate cycle Theco_1294 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Theco_1294 PWY-7254 TCA cycle VII (acetate-producers) Theco_1294 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Theco_1303 PWY-5025 indole-3-acetate biosynthesis IV (bacteria) Theco_1303 PWY-581 indole-3-acetate biosynthesis II Theco_1303 PWY-7308 acrylonitrile degradation I Theco_1310 PWY-3781 aerobic respiration I (cytochrome c) Theco_1310 PWY-4521 arsenite oxidation I (respiratory) Theco_1310 PWY-6692 Fe(II) oxidation Theco_1310 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Theco_1314 PWY-4261 glycerol degradation I Theco_1349 PWY-842 starch degradation I Theco_1391 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Theco_1391 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Theco_1402 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Theco_1402 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Theco_1404 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Theco_1404 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Theco_1422 PWY-1042 glycolysis IV (plant cytosol) Theco_1422 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Theco_1422 PWY-5484 glycolysis II (from fructose 6-phosphate) Theco_1422 PWY-7385 1,3-propanediol biosynthesis (engineered) Theco_1440 PWY-5101 L-isoleucine biosynthesis II Theco_1440 PWY-6871 3-methylbutanol biosynthesis Theco_1447 PWY-5686 UMP biosynthesis Theco_1479 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Theco_1479 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Theco_1479 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Theco_1479 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Theco_1479 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Theco_1479 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Theco_1479 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Theco_1479 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Theco_1480 PWY-5386 methylglyoxal degradation I Theco_1500 PWY-6527 stachyose degradation Theco_1539 PWY-6807 xyloglucan degradation II (exoglucanase) Theco_1549 PWY-7456 mannan degradation Theco_1578 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Theco_1578 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Theco_1578 PWY-6269 adenosylcobalamin salvage from cobinamide II Theco_1579 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Theco_1579 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Theco_1579 PWY-6269 adenosylcobalamin salvage from cobinamide II Theco_1580 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Theco_1580 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Theco_1580 PWY-6269 adenosylcobalamin salvage from cobinamide II Theco_1596 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Theco_1606 PWY-3961 phosphopantothenate biosynthesis II Theco_1624 PWY-6906 chitin derivatives degradation Theco_1624 PWY-7077 N-acetyl-D-galactosamine degradation Theco_1624 PWY-7395 D-galactosamine and N-acetyl-D-galactosamine degradation Theco_1626 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Theco_1626 PWY-6855 chitin degradation I (archaea) Theco_1626 PWY-6906 chitin derivatives degradation Theco_1675 PWY-5057 L-valine degradation II Theco_1675 PWY-5076 L-leucine degradation III Theco_1675 PWY-5078 L-isoleucine degradation II Theco_1675 PWY-5101 L-isoleucine biosynthesis II Theco_1675 PWY-5103 L-isoleucine biosynthesis III Theco_1675 PWY-5104 L-isoleucine biosynthesis IV Theco_1675 PWY-5108 L-isoleucine biosynthesis V Theco_1713 PWY-3841 folate transformations II Theco_1713 PWY-6614 tetrahydrofolate biosynthesis Theco_1714 PWY-3841 folate transformations II Theco_1714 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Theco_1714 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Theco_1714 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Theco_1714 PWY-7199 pyrimidine deoxyribonucleosides salvage Theco_1714 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Theco_1716 PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA Theco_1716 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA Theco_1723 PWY-6898 thiamin salvage III Theco_1723 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Theco_1723 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Theco_1742 PWY-2201 folate transformations I Theco_1742 PWY-3841 folate transformations II Theco_1743 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation Theco_1743 PWY-5389 3-methylthiopropanoate biosynthesis Theco_1749 PWY-381 nitrate reduction II (assimilatory) Theco_1749 PWY-5675 nitrate reduction V (assimilatory) Theco_1749 PWY-6549 L-glutamine biosynthesis III Theco_1749 PWY-6963 ammonia assimilation cycle I Theco_1749 PWY-6964 ammonia assimilation cycle II Theco_1758 PWY-2781 cis-zeatin biosynthesis Theco_1801 PWY-3341 L-proline biosynthesis III Theco_1801 PWY-4981 L-proline biosynthesis II (from arginine) Theco_1801 PWY-6344 L-ornithine degradation II (Stickland reaction) Theco_1802 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation Theco_1802 PWY-5532 adenosine nucleotides degradation IV Theco_1802 PWY-5723 Rubisco shunt Theco_1803 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation Theco_1804 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation Theco_1806 PWY-5482 pyruvate fermentation to acetate II Theco_1806 PWY-5485 pyruvate fermentation to acetate IV Theco_1806 PWY-5497 purine nucleobases degradation II (anaerobic) Theco_1807 PWY-1361 benzoyl-CoA degradation I (aerobic) Theco_1807 PWY-5109 2-methylbutanoate biosynthesis Theco_1807 PWY-5136 fatty acid β-oxidation II (peroxisome) Theco_1807 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Theco_1807 PWY-5177 glutaryl-CoA degradation Theco_1807 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Theco_1807 PWY-6435 4-hydroxybenzoate biosynthesis V Theco_1807 PWY-6583 pyruvate fermentation to butanol I Theco_1807 PWY-6863 pyruvate fermentation to hexanol Theco_1807 PWY-6883 pyruvate fermentation to butanol II Theco_1807 PWY-6944 androstenedione degradation Theco_1807 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Theco_1807 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Theco_1807 PWY-7007 methyl ketone biosynthesis Theco_1807 PWY-7046 4-coumarate degradation (anaerobic) Theco_1807 PWY-7094 fatty acid salvage Theco_1807 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Theco_1807 PWY-735 jasmonic acid biosynthesis Theco_1807 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Theco_1815 PWY-5155 β-alanine biosynthesis III Theco_1817 PWY-6654 phosphopantothenate biosynthesis III Theco_1818 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Theco_1818 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Theco_1823 PWY-2941 L-lysine biosynthesis II Theco_1823 PWY-2942 L-lysine biosynthesis III Theco_1823 PWY-5097 L-lysine biosynthesis VI Theco_1845 PWY-5958 acridone alkaloid biosynthesis Theco_1845 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Theco_1845 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Theco_1846 PWY-3461 L-tyrosine biosynthesis II Theco_1846 PWY-3462 L-phenylalanine biosynthesis II Theco_1846 PWY-6120 L-tyrosine biosynthesis III Theco_1846 PWY-6627 salinosporamide A biosynthesis Theco_1847 PWY-6164 3-dehydroquinate biosynthesis I Theco_1848 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Theco_1851 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Theco_1851 PWY-7176 UTP and CTP de novo biosynthesis Theco_1851 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Theco_1851 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Theco_1851 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Theco_1851 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Theco_1851 PWY-7205 CMP phosphorylation Theco_1851 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Theco_1851 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Theco_1851 PWY-7221 guanosine ribonucleotides de novo biosynthesis Theco_1851 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Theco_1851 PWY-7224 purine deoxyribonucleosides salvage Theco_1851 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Theco_1851 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Theco_1853 PWY-7371 1,4-dihydroxy-6-naphthoate biosynthesis II Theco_1853 PWY-7374 1,4-dihydroxy-6-naphthoate biosynthesis I Theco_1856 PWY-5839 menaquinol-7 biosynthesis Theco_1856 PWY-5844 menaquinol-9 biosynthesis Theco_1856 PWY-5849 menaquinol-6 biosynthesis Theco_1856 PWY-5890 menaquinol-10 biosynthesis Theco_1856 PWY-5891 menaquinol-11 biosynthesis Theco_1856 PWY-5892 menaquinol-12 biosynthesis Theco_1856 PWY-5895 menaquinol-13 biosynthesis Theco_1857 PWY-5807 heptaprenyl diphosphate biosynthesis Theco_1868 PWY-5667 CDP-diacylglycerol biosynthesis I Theco_1868 PWY-5981 CDP-diacylglycerol biosynthesis III Theco_1874 PWY-7205 CMP phosphorylation Theco_1901 PWY-6167 flavin biosynthesis II (archaea) Theco_1901 PWY-6168 flavin biosynthesis III (fungi) Theco_1902 PWY-6167 flavin biosynthesis II (archaea) Theco_1902 PWY-6168 flavin biosynthesis III (fungi) Theco_1902 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Theco_1903 PWY-6167 flavin biosynthesis II (archaea) Theco_1903 PWY-6168 flavin biosynthesis III (fungi) Theco_1903 PWY-7219 adenosine ribonucleotides de novo biosynthesis Theco_1908 PWY-2941 L-lysine biosynthesis II Theco_1908 PWY-2942 L-lysine biosynthesis III Theco_1908 PWY-5097 L-lysine biosynthesis VI Theco_1917 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Theco_1917 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Theco_1935 PWY-7181 pyrimidine deoxyribonucleosides degradation Theco_1937 PWY-4202 arsenate detoxification I (glutaredoxin) Theco_1937 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Theco_1937 PWY-6608 guanosine nucleotides degradation III Theco_1937 PWY-6609 adenine and adenosine salvage III Theco_1937 PWY-6611 adenine and adenosine salvage V Theco_1937 PWY-6620 guanine and guanosine salvage Theco_1937 PWY-6627 salinosporamide A biosynthesis Theco_1937 PWY-6644 fluoroacetate and fluorothreonine biosynthesis Theco_1937 PWY-7179 purine deoxyribonucleosides degradation I Theco_1937 PWY-7179-1 purine deoxyribonucleosides degradation Theco_1938 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation Theco_1954 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Theco_1954 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Theco_1958 PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA Theco_1958 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA Theco_1968 PWY-6891 thiazole biosynthesis II (Bacillus) Theco_1968 PWY-6892 thiazole biosynthesis I (E. coli) Theco_1968 PWY-7560 methylerythritol phosphate pathway II Theco_1972 PWY-1722 formate reduction to 5,10-methylenetetrahydrofolate Theco_1972 PWY-2201 folate transformations I Theco_1972 PWY-3841 folate transformations II Theco_1972 PWY-5030 L-histidine degradation III Theco_1972 PWY-5497 purine nucleobases degradation II (anaerobic) Theco_1972 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate Theco_1990 PWY-2941 L-lysine biosynthesis II Theco_1990 PWY-2942 L-lysine biosynthesis III Theco_1990 PWY-5097 L-lysine biosynthesis VI Theco_1990 PWY-6559 spermidine biosynthesis II Theco_1990 PWY-6562 norspermidine biosynthesis Theco_1990 PWY-7153 grixazone biosynthesis Theco_1993 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Theco_1993 PWY-6416 quinate degradation II Theco_1993 PWY-6707 gallate biosynthesis Theco_2018 PWY-5437 L-threonine degradation I Theco_2018 PWY-7013 L-1,2-propanediol degradation Theco_2021 PWY-7533 gliotoxin biosynthesis Theco_2028 PWY-5269 cardiolipin biosynthesis II Theco_2028 PWY-5668 cardiolipin biosynthesis I Theco_2043 PWY-2941 L-lysine biosynthesis II Theco_2043 PWY-2942 L-lysine biosynthesis III Theco_2043 PWY-5097 L-lysine biosynthesis VI Theco_2044 PWY-2941 L-lysine biosynthesis II Theco_2044 PWY-2942 L-lysine biosynthesis III Theco_2044 PWY-5097 L-lysine biosynthesis VI Theco_2044 PWY-6559 spermidine biosynthesis II Theco_2044 PWY-6562 norspermidine biosynthesis Theco_2044 PWY-7153 grixazone biosynthesis Theco_2045 PWY-2941 L-lysine biosynthesis II Theco_2045 PWY-2942 L-lysine biosynthesis III Theco_2045 PWY-5097 L-lysine biosynthesis VI Theco_2045 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Theco_2045 PWY-6559 spermidine biosynthesis II Theco_2045 PWY-6562 norspermidine biosynthesis Theco_2045 PWY-7153 grixazone biosynthesis Theco_2045 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Theco_2048 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Theco_2048 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Theco_2048 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Theco_2048 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation Theco_2053 PWY-5523 5,6-dimethylbenzimidazole biosynthesis Theco_2053 PWY-6167 flavin biosynthesis II (archaea) Theco_2053 PWY-6168 flavin biosynthesis III (fungi) Theco_2065 PWY-7560 methylerythritol phosphate pathway II Theco_2102 PWY-7219 adenosine ribonucleotides de novo biosynthesis Theco_2115 PWY-5392 reductive TCA cycle II Theco_2115 PWY-5537 pyruvate fermentation to acetate V Theco_2115 PWY-5538 pyruvate fermentation to acetate VI Theco_2115 PWY-5690 TCA cycle II (plants and fungi) Theco_2115 PWY-5913 TCA cycle VI (obligate autotrophs) Theco_2115 PWY-6728 methylaspartate cycle Theco_2115 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Theco_2115 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Theco_2116 PWY-5392 reductive TCA cycle II Theco_2116 PWY-5537 pyruvate fermentation to acetate V Theco_2116 PWY-5538 pyruvate fermentation to acetate VI Theco_2116 PWY-5690 TCA cycle II (plants and fungi) Theco_2116 PWY-5913 TCA cycle VI (obligate autotrophs) Theco_2116 PWY-6728 methylaspartate cycle Theco_2116 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Theco_2116 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Theco_2126 PWY-6829 tRNA methylation (yeast) Theco_2126 PWY-7285 methylwyosine biosynthesis Theco_2126 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Theco_2137 PWY-5367 petroselinate biosynthesis Theco_2137 PWY-5971 palmitate biosynthesis II (bacteria and plants) Theco_2137 PWY-5973 cis-vaccenate biosynthesis Theco_2137 PWY-5989 stearate biosynthesis II (bacteria and plants) Theco_2137 PWY-5994 palmitate biosynthesis I (animals and fungi) Theco_2137 PWY-6113 superpathway of mycolate biosynthesis Theco_2137 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Theco_2137 PWY-6519 8-amino-7-oxononanoate biosynthesis I Theco_2137 PWY-6951 Theco_2137 Theco_2137 PWY-7053 docosahexaenoate biosynthesis I (lower eukaryotes) Theco_2137 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Theco_2137 PWYG-321 mycolate biosynthesis Theco_2138 PWY-4381 fatty acid biosynthesis initiation I Theco_2138 PWY-6799 fatty acid biosynthesis (plant mitochondria) Theco_2138 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Theco_2139 PWY-4381 fatty acid biosynthesis initiation I Theco_2178 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Theco_2178 PWY-5723 Rubisco shunt Theco_2189 PWY-7221 guanosine ribonucleotides de novo biosynthesis Theco_2191 PWY-2201 folate transformations I Theco_2191 PWY-3841 folate transformations II Theco_2192 PWY-2941 L-lysine biosynthesis II Theco_2192 PWY-5097 L-lysine biosynthesis VI Theco_2220 PWY-6151 S-adenosyl-L-methionine cycle I Theco_2220 PWY-6153 autoinducer AI-2 biosynthesis I Theco_2220 PWY-6154 autoinducer AI-2 biosynthesis II (Vibrio) Theco_2225 PWY-7310 D-glucosaminate degradation Theco_2228 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Theco_2231 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Theco_2234 PWY-4261 glycerol degradation I Theco_2266 PWY-7456 mannan degradation Theco_2267 PWY-7456 mannan degradation Theco_2287 PWY-5686 UMP biosynthesis Theco_2288 PWY-5686 UMP biosynthesis Theco_2289 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Theco_2289 PWY-5686 UMP biosynthesis Theco_2289 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Theco_2290 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Theco_2290 PWY-5686 UMP biosynthesis Theco_2290 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Theco_2291 PWY-5686 UMP biosynthesis Theco_2292 PWY-5686 UMP biosynthesis Theco_2293 PWY-7183 pyrimidine nucleobases salvage I Theco_2294 PWY-5097 L-lysine biosynthesis VI Theco_2305 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Theco_2315 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Theco_2315 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Theco_2316 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Theco_2316 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Theco_2317 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Theco_2317 PWY-6385 peptidoglycan biosynthesis III (mycobacteria) Theco_2317 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Theco_2317 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Theco_2319 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Theco_2319 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Theco_2320 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Theco_2320 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Theco_2320 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Theco_2321 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Theco_2321 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Theco_2328 PWY-5041 S-adenosyl-L-methionine cycle II Theco_2331 PWY-6654 phosphopantothenate biosynthesis III Theco_2338 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) Theco_2338 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Theco_2347 PWY-6823 molybdenum cofactor biosynthesis Theco_2347 PWY-6891 thiazole biosynthesis II (Bacillus) Theco_2347 PWY-6892 thiazole biosynthesis I (E. coli) Theco_2347 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis Theco_2354 PWY-5663 tetrahydrobiopterin biosynthesis I Theco_2354 PWY-5664 tetrahydrobiopterin biosynthesis II Theco_2354 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Theco_2354 PWY-6703 preQ0 biosynthesis Theco_2354 PWY-6983 tetrahydrobiopterin biosynthesis III Theco_2354 PWY-7442 drosopterin and aurodrosopterin biosynthesis Theco_2366 PWY-6556 pyrimidine ribonucleosides salvage II Theco_2366 PWY-7181 pyrimidine deoxyribonucleosides degradation Theco_2366 PWY-7193 pyrimidine ribonucleosides salvage I Theco_2366 PWY-7199 pyrimidine deoxyribonucleosides salvage Theco_2367 PWY-7039 phosphatidate metabolism, as a signaling molecule Theco_2374 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) Theco_2389 PWY-6807 xyloglucan degradation II (exoglucanase) Theco_2390 PWY-5381 pyridine nucleotide cycling (plants) Theco_2394 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation Theco_2420 PWY-3341 L-proline biosynthesis III Theco_2420 PWY-4981 L-proline biosynthesis II (from arginine) Theco_2420 PWY-6344 L-ornithine degradation II (Stickland reaction) Theco_2427 PWY-5381 pyridine nucleotide cycling (plants) Theco_2427 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde Theco_2429 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Theco_2460 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Theco_2460 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Theco_2460 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Theco_2460 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Theco_2460 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Theco_2460 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Theco_2460 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Theco_2460 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Theco_2461 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Theco_2461 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Theco_2461 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Theco_2461 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Theco_2461 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Theco_2461 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Theco_2461 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Theco_2461 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Theco_2464 PWY-5041 S-adenosyl-L-methionine cycle II Theco_2464 PWY-6151 S-adenosyl-L-methionine cycle I Theco_2464 PWY-6936 seleno-amino acid biosynthesis Theco_2464 PWY-702 L-methionine biosynthesis II Theco_2475 PWY-5704 urea degradation II Theco_2477 PWY-5101 L-isoleucine biosynthesis II Theco_2477 PWY-5103 L-isoleucine biosynthesis III Theco_2477 PWY-5104 L-isoleucine biosynthesis IV Theco_2477 PWY-7111 pyruvate fermentation to isobutanol (engineered) Theco_2493 PWY-6823 molybdenum cofactor biosynthesis Theco_2493 PWY-6891 thiazole biosynthesis II (Bacillus) Theco_2493 PWY-6892 thiazole biosynthesis I (E. coli) Theco_2493 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis Theco_2506 PWY-6605 adenine and adenosine salvage II Theco_2506 PWY-6610 adenine and adenosine salvage IV Theco_2515 PWY-6700 queuosine biosynthesis Theco_2516 PWY-6700 queuosine biosynthesis Theco_2528 PWY-5057 L-valine degradation II Theco_2528 PWY-5076 L-leucine degradation III Theco_2528 PWY-5078 L-isoleucine degradation II Theco_2528 PWY-5101 L-isoleucine biosynthesis II Theco_2528 PWY-5103 L-isoleucine biosynthesis III Theco_2528 PWY-5104 L-isoleucine biosynthesis IV Theco_2528 PWY-5108 L-isoleucine biosynthesis V Theco_2529 PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) Theco_2530 PWY-702 L-methionine biosynthesis II Theco_2563 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Theco_2563 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Theco_2564 PWY-2161 folate polyglutamylation Theco_2568 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Theco_2570 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Theco_2570 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Theco_2571 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Theco_2571 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Theco_2571 PWY-5194 siroheme biosynthesis Theco_2571 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Theco_2572 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Theco_2572 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Theco_2573 PWY-5194 siroheme biosynthesis Theco_2573 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Theco_2575 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Theco_2576 PWY-6834 spermidine biosynthesis III Theco_2581 PWY-7560 methylerythritol phosphate pathway II Theco_2586 PWY-4061 glutathione-mediated detoxification I Theco_2586 PWY-6842 glutathione-mediated detoxification II Theco_2586 PWY-7112 4-hydroxy-2-nonenal detoxification Theco_2586 PWY-7533 gliotoxin biosynthesis Theco_2605 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation Theco_2612 PWY-1622 formaldehyde assimilation I (serine pathway) Theco_2612 PWY-5392 reductive TCA cycle II Theco_2612 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Theco_2612 PWY-5690 TCA cycle II (plants and fungi) Theco_2612 PWY-5913 TCA cycle VI (obligate autotrophs) Theco_2612 PWY-6728 methylaspartate cycle Theco_2612 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Theco_2612 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Theco_2612 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Theco_2613 PWY-5913 TCA cycle VI (obligate autotrophs) Theco_2613 PWY-6549 L-glutamine biosynthesis III Theco_2613 PWY-6728 methylaspartate cycle Theco_2613 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Theco_2613 PWY-7124 ethylene biosynthesis V (engineered) Theco_2613 PWY-7254 TCA cycle VII (acetate-producers) Theco_2613 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Theco_2616 PWY-1042 glycolysis IV (plant cytosol) Theco_2616 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Theco_2616 PWY-5484 glycolysis II (from fructose 6-phosphate) Theco_2616 PWY-5723 Rubisco shunt Theco_2616 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Theco_2616 PWY-6886 1-butanol autotrophic biosynthesis Theco_2616 PWY-6901 superpathway of glucose and xylose degradation Theco_2616 PWY-7003 glycerol degradation to butanol Theco_2616 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Theco_2616 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Theco_2617 PWY-4381 fatty acid biosynthesis initiation I Theco_2617 PWY-5743 3-hydroxypropanoate cycle Theco_2617 PWY-5744 glyoxylate assimilation Theco_2617 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Theco_2617 PWY-6679 jadomycin biosynthesis Theco_2617 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Theco_2618 PWY-4381 fatty acid biosynthesis initiation I Theco_2618 PWY-5743 3-hydroxypropanoate cycle Theco_2618 PWY-5744 glyoxylate assimilation Theco_2618 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Theco_2618 PWY-6679 jadomycin biosynthesis Theco_2618 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Theco_2626 PWY-1281 sulfoacetaldehyde degradation I Theco_2626 PWY-5482 pyruvate fermentation to acetate II Theco_2626 PWY-5485 pyruvate fermentation to acetate IV Theco_2626 PWY-5497 purine nucleobases degradation II (anaerobic) Theco_2626 PWY-6637 sulfolactate degradation II Theco_2646 PWY-6823 molybdenum cofactor biosynthesis Theco_2647 PWY-6823 molybdenum cofactor biosynthesis Theco_2664 PWY-6823 molybdenum cofactor biosynthesis Theco_2664 PWY-6891 thiazole biosynthesis II (Bacillus) Theco_2664 PWY-6892 thiazole biosynthesis I (E. coli) Theco_2664 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis Theco_2670 PWY-6754 S-methyl-5'-thioadenosine degradation I Theco_2671 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation Theco_2671 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Theco_2692 PWY-381 nitrate reduction II (assimilatory) Theco_2692 PWY-5675 nitrate reduction V (assimilatory) Theco_2692 PWY-6549 L-glutamine biosynthesis III Theco_2692 PWY-6963 ammonia assimilation cycle I Theco_2692 PWY-6964 ammonia assimilation cycle II Theco_2696 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Theco_2696 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Theco_2696 PWY-6164 3-dehydroquinate biosynthesis I Theco_2697 PWY-7560 methylerythritol phosphate pathway II Theco_2710 PWY-5198 factor 420 biosynthesis Theco_2711 PWY-6936 seleno-amino acid biosynthesis Theco_2721 PWY-3781 aerobic respiration I (cytochrome c) Theco_2721 PWY-4302 aerobic respiration III (alternative oxidase pathway) Theco_2721 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Theco_2721 PWY-5690 TCA cycle II (plants and fungi) Theco_2721 PWY-6728 methylaspartate cycle Theco_2721 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Theco_2721 PWY-7254 TCA cycle VII (acetate-producers) Theco_2721 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Theco_2722 PWY-3781 aerobic respiration I (cytochrome c) Theco_2722 PWY-4302 aerobic respiration III (alternative oxidase pathway) Theco_2722 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Theco_2722 PWY-5690 TCA cycle II (plants and fungi) Theco_2722 PWY-6728 methylaspartate cycle Theco_2722 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Theco_2722 PWY-7254 TCA cycle VII (acetate-producers) Theco_2722 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Theco_2745 PWY-101 photosynthesis light reactions Theco_2745 PWY-7230 ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic) Theco_2760 PWY-7310 D-glucosaminate degradation Theco_2761 PWY-7310 D-glucosaminate degradation Theco_2775 PWY-6784 cellulose and hemicellulose degradation (cellulolosome) Theco_2780 PWY-6784 cellulose and hemicellulose degradation (cellulolosome) Theco_2781 PWY-6788 cellulose degradation II (fungi) Theco_2854 PWY-6784 cellulose and hemicellulose degradation (cellulolosome) Theco_2916 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Theco_2932 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Theco_2958 PWY-6807 xyloglucan degradation II (exoglucanase) Theco_2964 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Theco_2964 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Theco_2968 PWY-6683 sulfate reduction III (assimilatory) Theco_2969 PWY-5194 siroheme biosynthesis Theco_2969 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Theco_2972 PWY-842 starch degradation I Theco_3006 PWY-6871 3-methylbutanol biosynthesis Theco_3025 PWY-2301 myo-inositol biosynthesis Theco_3025 PWY-4702 phytate degradation I Theco_3025 PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation Theco_3027 PWY-5971 palmitate biosynthesis II (bacteria and plants) Theco_3027 PWY-5973 cis-vaccenate biosynthesis Theco_3027 PWY-5989 stearate biosynthesis II (bacteria and plants) Theco_3027 PWY-6113 superpathway of mycolate biosynthesis Theco_3027 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Theco_3027 PWY-6519 8-amino-7-oxononanoate biosynthesis I Theco_3027 PWY-7096 triclosan resistance Theco_3027 PWYG-321 mycolate biosynthesis Theco_3029 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Theco_3029 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Theco_3038 PWY-6854 ethylene biosynthesis III (microbes) Theco_3048 PWY-4261 glycerol degradation I Theco_3048 PWY-6118 glycerol-3-phosphate shuttle Theco_3048 PWY-6952 glycerophosphodiester degradation Theco_3049 PWY-5663 tetrahydrobiopterin biosynthesis I Theco_3049 PWY-5664 tetrahydrobiopterin biosynthesis II Theco_3049 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Theco_3049 PWY-6703 preQ0 biosynthesis Theco_3049 PWY-6983 tetrahydrobiopterin biosynthesis III Theco_3049 PWY-7442 drosopterin and aurodrosopterin biosynthesis Theco_3058 PWY-6854 ethylene biosynthesis III (microbes) Theco_3060 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Theco_3060 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Theco_3060 PWY-7382 lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast) Theco_3090 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Theco_3090 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Theco_3090 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Theco_3091 PWY-6123 inosine-5'-phosphate biosynthesis I Theco_3091 PWY-6124 inosine-5'-phosphate biosynthesis II Theco_3091 PWY-7234 inosine-5'-phosphate biosynthesis III Theco_3092 PWY-6123 inosine-5'-phosphate biosynthesis I Theco_3092 PWY-6124 inosine-5'-phosphate biosynthesis II Theco_3092 PWY-7234 inosine-5'-phosphate biosynthesis III Theco_3093 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Theco_3093 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate Theco_3094 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Theco_3094 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Theco_3094 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Theco_3095 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Theco_3095 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Theco_3095 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Theco_3095 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Theco_3096 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Theco_3096 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Theco_3096 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Theco_3097 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Theco_3097 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Theco_3097 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Theco_3098 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Theco_3098 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Theco_3098 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Theco_3099 PWY-6123 inosine-5'-phosphate biosynthesis I Theco_3099 PWY-6124 inosine-5'-phosphate biosynthesis II Theco_3099 PWY-7234 inosine-5'-phosphate biosynthesis III Theco_3100 PWY-6123 inosine-5'-phosphate biosynthesis I Theco_3100 PWY-6124 inosine-5'-phosphate biosynthesis II Theco_3100 PWY-7219 adenosine ribonucleotides de novo biosynthesis Theco_3100 PWY-7234 inosine-5'-phosphate biosynthesis III Theco_3102 PWY-6123 inosine-5'-phosphate biosynthesis I Theco_3102 PWY-7234 inosine-5'-phosphate biosynthesis III Theco_3145 PWY-7221 guanosine ribonucleotides de novo biosynthesis Theco_3153 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Theco_3160 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Theco_3160 PWY-6385 peptidoglycan biosynthesis III (mycobacteria) Theco_3160 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Theco_3160 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Theco_3166 PWY-3821 galactose degradation III Theco_3166 PWY-6317 galactose degradation I (Leloir pathway) Theco_3166 PWY-6397 mycolyl-arabinogalactan-peptidoglycan complex biosynthesis Theco_3166 PWY-6527 stachyose degradation Theco_3166 PWY-7328 superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis Theco_3166 PWY-7344 UDP-D-galactose biosynthesis Theco_3183 PWY-3801 sucrose degradation II (sucrose synthase) Theco_3183 PWY-6527 stachyose degradation Theco_3183 PWY-6981 chitin biosynthesis Theco_3183 PWY-7238 sucrose biosynthesis II Theco_3183 PWY-7343 UDP-glucose biosynthesis Theco_3204 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Theco_3204 PWY-7176 UTP and CTP de novo biosynthesis Theco_3204 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Theco_3204 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Theco_3204 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Theco_3204 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Theco_3204 PWY-7205 CMP phosphorylation Theco_3204 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Theco_3204 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Theco_3204 PWY-7221 guanosine ribonucleotides de novo biosynthesis Theco_3204 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Theco_3204 PWY-7224 purine deoxyribonucleosides salvage Theco_3204 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Theco_3204 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Theco_3229 PWY-6784 cellulose and hemicellulose degradation (cellulolosome) Theco_3230 PWY-6784 cellulose and hemicellulose degradation (cellulolosome) Theco_3243 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Theco_3243 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation Theco_3243 PWY-7242 D-fructuronate degradation Theco_3243 PWY-7310 D-glucosaminate degradation Theco_3245 PWY-3801 sucrose degradation II (sucrose synthase) Theco_3245 PWY-6527 stachyose degradation Theco_3245 PWY-6981 chitin biosynthesis Theco_3245 PWY-7238 sucrose biosynthesis II Theco_3245 PWY-7343 UDP-glucose biosynthesis Theco_3255 PWY-5480 pyruvate fermentation to ethanol I Theco_3255 PWY-5485 pyruvate fermentation to acetate IV Theco_3255 PWY-5493 reductive monocarboxylic acid cycle Theco_3306 PWY-3121 linamarin degradation Theco_3306 PWY-5176 coumarin biosynthesis (via 2-coumarate) Theco_3306 PWY-6002 lotaustralin degradation Theco_3306 PWY-6788 cellulose degradation II (fungi) Theco_3306 PWY-7089 taxiphyllin bioactivation Theco_3306 PWY-7091 linustatin bioactivation Theco_3306 PWY-7092 neolinustatin bioactivation Theco_3327 PWY-5941 glycogen degradation II (eukaryotic) Theco_3327 PWY-6724 starch degradation II Theco_3327 PWY-6737 starch degradation V Theco_3327 PWY-7238 sucrose biosynthesis II Theco_3376 PWY-6807 xyloglucan degradation II (exoglucanase) Theco_3465 PWY-3841 folate transformations II Theco_3465 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Theco_3465 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Theco_3465 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Theco_3465 PWY-7199 pyrimidine deoxyribonucleosides salvage Theco_3465 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Theco_3483 PWY-1042 glycolysis IV (plant cytosol) Theco_3483 PWY-1622 formaldehyde assimilation I (serine pathway) Theco_3483 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Theco_3483 PWY-5484 glycolysis II (from fructose 6-phosphate) Theco_3483 PWY-5723 Rubisco shunt Theco_3483 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Theco_3483 PWY-6886 1-butanol autotrophic biosynthesis Theco_3483 PWY-6901 superpathway of glucose and xylose degradation Theco_3483 PWY-7003 glycerol degradation to butanol Theco_3483 PWY-7124 ethylene biosynthesis V (engineered) Theco_3483 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Theco_3484 PWY-1042 glycolysis IV (plant cytosol) Theco_3484 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Theco_3484 PWY-5484 glycolysis II (from fructose 6-phosphate) Theco_3484 PWY-5723 Rubisco shunt Theco_3484 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Theco_3484 PWY-6886 1-butanol autotrophic biosynthesis Theco_3484 PWY-6901 superpathway of glucose and xylose degradation Theco_3484 PWY-7003 glycerol degradation to butanol Theco_3484 PWY-7124 ethylene biosynthesis V (engineered) Theco_3484 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Theco_3485 PWY-1042 glycolysis IV (plant cytosol) Theco_3485 PWY-5484 glycolysis II (from fructose 6-phosphate) Theco_3485 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Theco_3485 PWY-7003 glycerol degradation to butanol Theco_3486 PWY-1042 glycolysis IV (plant cytosol) Theco_3486 PWY-5484 glycolysis II (from fructose 6-phosphate) Theco_3486 PWY-6886 1-butanol autotrophic biosynthesis Theco_3486 PWY-6901 superpathway of glucose and xylose degradation Theco_3486 PWY-7003 glycerol degradation to butanol Theco_3487 PWY-1042 glycolysis IV (plant cytosol) Theco_3487 PWY-5484 glycolysis II (from fructose 6-phosphate) Theco_3487 PWY-6901 superpathway of glucose and xylose degradation Theco_3487 PWY-7003 glycerol degradation to butanol Theco_3497 PWY-2723 trehalose degradation V Theco_3497 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Theco_3497 PWY-5661 GDP-glucose biosynthesis Theco_3497 PWY-7238 sucrose biosynthesis II Theco_3497 PWY-7385 1,3-propanediol biosynthesis (engineered) Theco_3518 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Theco_3518 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Theco_3518 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Theco_3538 PWY-7219 adenosine ribonucleotides de novo biosynthesis Theco_3539 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Theco_3539 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Theco_3540 PWY-1042 glycolysis IV (plant cytosol) Theco_3540 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Theco_3540 PWY-5484 glycolysis II (from fructose 6-phosphate) Theco_3540 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Theco_3540 PWY-7385 1,3-propanediol biosynthesis (engineered) Theco_3542 PWY-7176 UTP and CTP de novo biosynthesis Theco_3542 PWY-7177 UTP and CTP dephosphorylation II Theco_3542 PWY-7185 UTP and CTP dephosphorylation I Theco_3548 PWY-6123 inosine-5'-phosphate biosynthesis I Theco_3548 PWY-6124 inosine-5'-phosphate biosynthesis II Theco_3548 PWY-7219 adenosine ribonucleotides de novo biosynthesis Theco_3548 PWY-7234 inosine-5'-phosphate biosynthesis III Theco_3560 PWY-40 putrescine biosynthesis I Theco_3560 PWY-6305 putrescine biosynthesis IV Theco_3575 PWY-5386 methylglyoxal degradation I Theco_3576 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Theco_3576 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Theco_3633 PWY-2941 L-lysine biosynthesis II Theco_3633 PWY-2942 L-lysine biosynthesis III Theco_3633 PWY-5097 L-lysine biosynthesis VI Theco_3651 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) Theco_3652 PWY-6466 pyridoxal 5'-phosphate biosynthesis II Theco_3653 PWY-6466 pyridoxal 5'-phosphate biosynthesis II Theco_3654 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Theco_3654 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Theco_3655 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Theco_3655 PWY-6596 adenosine nucleotides degradation I Theco_3655 PWY-7221 guanosine ribonucleotides de novo biosynthesis Theco_3661 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Theco_3661 PWY-6148 tetrahydromethanopterin biosynthesis Theco_3661 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Theco_3661 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Theco_3662 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Theco_3662 PWY-6148 tetrahydromethanopterin biosynthesis Theco_3662 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Theco_3662 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Theco_3663 PWY-6614 tetrahydrofolate biosynthesis Theco_3665 PWY-5958 acridone alkaloid biosynthesis Theco_3665 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Theco_3665 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Theco_3666 PWY-5958 acridone alkaloid biosynthesis Theco_3666 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Theco_3666 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Theco_3675 PWY-6936 seleno-amino acid biosynthesis Theco_3678 PWY-3961 phosphopantothenate biosynthesis II Theco_3679 PWY-5316 nicotine biosynthesis Theco_3679 PWY-5381 pyridine nucleotide cycling (plants) Theco_3679 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde Theco_3679 PWY-7342 superpathway of nicotine biosynthesis Theco_3680 PWY-5316 nicotine biosynthesis Theco_3680 PWY-7342 superpathway of nicotine biosynthesis Theco_3681 PWY-5316 nicotine biosynthesis Theco_3681 PWY-7342 superpathway of nicotine biosynthesis Theco_3683 PWY-6599 guanine and guanosine salvage II Theco_3683 PWY-6609 adenine and adenosine salvage III Theco_3683 PWY-6610 adenine and adenosine salvage IV Theco_3683 PWY-6620 guanine and guanosine salvage Theco_3713 PWY-3162 L-tryptophan degradation V (side chain pathway) Theco_3713 PWY-5057 L-valine degradation II Theco_3713 PWY-5076 L-leucine degradation III Theco_3713 PWY-5078 L-isoleucine degradation II Theco_3713 PWY-5079 L-phenylalanine degradation III Theco_3713 PWY-5082 L-methionine degradation III Theco_3713 PWY-5162 2-oxopentenoate degradation Theco_3713 PWY-5436 L-threonine degradation IV Theco_3713 PWY-5480 pyruvate fermentation to ethanol I Theco_3713 PWY-5486 pyruvate fermentation to ethanol II Theco_3713 PWY-5751 phenylethanol biosynthesis Theco_3713 PWY-6028 acetoin degradation Theco_3713 PWY-6313 serotonin degradation Theco_3713 PWY-6333 acetaldehyde biosynthesis I Theco_3713 PWY-6342 noradrenaline and adrenaline degradation Theco_3713 PWY-6587 pyruvate fermentation to ethanol III Theco_3713 PWY-6802 salidroside biosynthesis Theco_3713 PWY-6871 3-methylbutanol biosynthesis Theco_3713 PWY-7013 L-1,2-propanediol degradation Theco_3713 PWY-7085 triethylamine degradation Theco_3713 PWY-7111 pyruvate fermentation to isobutanol (engineered) Theco_3713 PWY-7118 chitin degradation to ethanol Theco_3713 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation Theco_3713 PWY-7396 butanol and isobutanol biosynthesis (engineered) Theco_3713 PWY-7557 dehydrodiconiferyl alcohol degradation Theco_3721 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Theco_3725 PWY-7560 methylerythritol phosphate pathway II Theco_3743 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Theco_3743 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Theco_3743 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Theco_3743 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Theco_3743 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Theco_3743 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Theco_3770 PWY-6823 molybdenum cofactor biosynthesis Theco_3770 PWY-6891 thiazole biosynthesis II (Bacillus) Theco_3770 PWY-6892 thiazole biosynthesis I (E. coli) Theco_3770 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis Theco_3793 PWY-7219 adenosine ribonucleotides de novo biosynthesis Theco_3807 PWY-5350 thiosulfate disproportionation III (rhodanese) Theco_3821 PWY-5041 S-adenosyl-L-methionine cycle II Theco_3821 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis Theco_3827 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Theco_3827 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Theco_3827 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Theco_3831 PWY-6749 CMP-legionaminate biosynthesis I Theco_3832 PWY-5971 palmitate biosynthesis II (bacteria and plants) Theco_3832 PWY-5973 cis-vaccenate biosynthesis Theco_3832 PWY-5989 stearate biosynthesis II (bacteria and plants) Theco_3832 PWY-5994 palmitate biosynthesis I (animals and fungi) Theco_3832 PWY-6113 superpathway of mycolate biosynthesis Theco_3832 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Theco_3832 PWY-6519 8-amino-7-oxononanoate biosynthesis I Theco_3832 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Theco_3832 PWYG-321 mycolate biosynthesis Theco_3833 PWY-5269 cardiolipin biosynthesis II Theco_3833 PWY-5668 cardiolipin biosynthesis I Theco_3843 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Theco_3843 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Theco_3859 PWY-7219 adenosine ribonucleotides de novo biosynthesis Theco_3861 PWY-7219 adenosine ribonucleotides de novo biosynthesis Theco_3868 PWY-7335 UDP-N-acetyl-α-D-mannosaminouronate biosynthesis Theco_3869 PWY-7183 pyrimidine nucleobases salvage I Theco_3880 PWY-1622 formaldehyde assimilation I (serine pathway) Theco_3880 PWY-181 photorespiration Theco_3880 PWY-2161 folate polyglutamylation Theco_3880 PWY-2201 folate transformations I Theco_3880 PWY-3661 glycine betaine degradation I Theco_3880 PWY-3661-1 glycine betaine degradation II (mammalian) Theco_3880 PWY-3841 folate transformations II Theco_3880 PWY-5497 purine nucleobases degradation II (anaerobic) Theco_3900 PWY-6655 xanthan biosynthesis Theco_3900 PWY-6658 acetan biosynthesis Theco_3903 PWY-3221 dTDP-L-rhamnose biosynthesis II Theco_3903 PWY-6808 dTDP-D-forosamine biosynthesis Theco_3903 PWY-6942 dTDP-D-desosamine biosynthesis Theco_3903 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis Theco_3903 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis Theco_3903 PWY-6974 dTDP-L-olivose biosynthesis Theco_3903 PWY-6976 dTDP-L-mycarose biosynthesis Theco_3903 PWY-7104 dTDP-L-megosamine biosynthesis Theco_3903 PWY-7301 dTDP-β-L-noviose biosynthesis Theco_3903 PWY-7312 dTDP-D-β-fucofuranose biosynthesis Theco_3903 PWY-7315 dTDP-N-acetylthomosamine biosynthesis Theco_3903 PWY-7316 dTDP-N-acetylviosamine biosynthesis Theco_3903 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis Theco_3903 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis Theco_3903 PWY-7414 dTDP-α-D-mycaminose biosynthesis Theco_3903 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis Theco_3905 PWY-3221 dTDP-L-rhamnose biosynthesis II Theco_3905 PWY-6808 dTDP-D-forosamine biosynthesis Theco_3905 PWY-6942 dTDP-D-desosamine biosynthesis Theco_3905 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis Theco_3905 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis Theco_3905 PWY-6974 dTDP-L-olivose biosynthesis Theco_3905 PWY-6976 dTDP-L-mycarose biosynthesis Theco_3905 PWY-7104 dTDP-L-megosamine biosynthesis Theco_3905 PWY-7301 dTDP-β-L-noviose biosynthesis Theco_3905 PWY-7312 dTDP-D-β-fucofuranose biosynthesis Theco_3905 PWY-7315 dTDP-N-acetylthomosamine biosynthesis Theco_3905 PWY-7316 dTDP-N-acetylviosamine biosynthesis Theco_3905 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis Theco_3905 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis Theco_3905 PWY-7414 dTDP-α-D-mycaminose biosynthesis Theco_3905 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis Theco_3920 PWY-3821 galactose degradation III Theco_3920 PWY-6317 galactose degradation I (Leloir pathway) Theco_3920 PWY-6397 mycolyl-arabinogalactan-peptidoglycan complex biosynthesis Theco_3920 PWY-6527 stachyose degradation Theco_3920 PWY-7328 superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis Theco_3920 PWY-7344 UDP-D-galactose biosynthesis Theco_3921 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Theco_3926 PWY-5663 tetrahydrobiopterin biosynthesis I Theco_3926 PWY-5664 tetrahydrobiopterin biosynthesis II Theco_3926 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Theco_3926 PWY-6703 preQ0 biosynthesis Theco_3926 PWY-6983 tetrahydrobiopterin biosynthesis III Theco_3926 PWY-7442 drosopterin and aurodrosopterin biosynthesis Theco_3960 PWY-6700 queuosine biosynthesis Theco_3963 PWY-7374 1,4-dihydroxy-6-naphthoate biosynthesis I