Tfu_0009	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Tfu_0009	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Tfu_0016	PWY-3861	mannitol degradation II
Tfu_0016	PWY-3881	mannitol biosynthesis
Tfu_0016	PWY-5659	GDP-mannose biosynthesis
Tfu_0016	PWY-7456	mannan degradation
Tfu_0016	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Tfu_0031	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Tfu_0042	PWY-2941	L-lysine biosynthesis II
Tfu_0042	PWY-2942	L-lysine biosynthesis III
Tfu_0042	PWY-5097	L-lysine biosynthesis VI
Tfu_0042	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Tfu_0042	PWY-6559	spermidine biosynthesis II
Tfu_0042	PWY-6562	norspermidine biosynthesis
Tfu_0042	PWY-7153	grixazone biosynthesis
Tfu_0042	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Tfu_0043	PWY-2941	L-lysine biosynthesis II
Tfu_0043	PWY-2942	L-lysine biosynthesis III
Tfu_0043	PWY-5097	L-lysine biosynthesis VI
Tfu_0043	PWY-6559	spermidine biosynthesis II
Tfu_0043	PWY-6562	norspermidine biosynthesis
Tfu_0043	PWY-7153	grixazone biosynthesis
Tfu_0058	PWY-40	putrescine biosynthesis I
Tfu_0058	PWY-6305	putrescine biosynthesis IV
Tfu_0060	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tfu_0060	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tfu_0083	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Tfu_0092	PWY-1622	formaldehyde assimilation I (serine pathway)
Tfu_0092	PWY-5392	reductive TCA cycle II
Tfu_0092	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Tfu_0092	PWY-5690	TCA cycle II (plants and fungi)
Tfu_0092	PWY-5913	TCA cycle VI (obligate autotrophs)
Tfu_0092	PWY-6728	methylaspartate cycle
Tfu_0092	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Tfu_0092	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Tfu_0092	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Tfu_0093	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Tfu_0093	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Tfu_0156	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Tfu_0156	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Tfu_0156	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Tfu_0158	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Tfu_0158	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Tfu_0158	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Tfu_0178	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Tfu_0178	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Tfu_0178	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Tfu_0188	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Tfu_0188	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Tfu_0188	PWY-7242	D-fructuronate degradation
Tfu_0188	PWY-7310	D-glucosaminate degradation
Tfu_0248	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Tfu_0248	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Tfu_0273	PWY-2723	trehalose degradation V
Tfu_0273	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Tfu_0273	PWY-5661	GDP-glucose biosynthesis
Tfu_0273	PWY-7238	sucrose biosynthesis II
Tfu_0273	PWY-7385	1,3-propanediol biosynthesis (engineered)
Tfu_0301	PWY-6409	pyoverdine I biosynthesis
Tfu_0301	PWY-6562	norspermidine biosynthesis
Tfu_0301	PWY-761	rhizobactin 1021 biosynthesis
Tfu_0312	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Tfu_0312	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Tfu_0312	PWY-6268	adenosylcobalamin salvage from cobalamin
Tfu_0312	PWY-6269	adenosylcobalamin salvage from cobinamide II
Tfu_0314	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Tfu_0315	PWY-5194	siroheme biosynthesis
Tfu_0315	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Tfu_0318	PWY-6683	sulfate reduction III (assimilatory)
Tfu_0320	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
Tfu_0354	PWY-5350	thiosulfate disproportionation III (rhodanese)
Tfu_0373	PWY-3801	sucrose degradation II (sucrose synthase)
Tfu_0373	PWY-6527	stachyose degradation
Tfu_0373	PWY-6981	chitin biosynthesis
Tfu_0373	PWY-7238	sucrose biosynthesis II
Tfu_0373	PWY-7343	UDP-glucose biosynthesis
Tfu_0374	PWY-6823	molybdenum cofactor biosynthesis
Tfu_0407	PWY-7560	methylerythritol phosphate pathway II
Tfu_0414	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Tfu_0419	PWY-5278	sulfite oxidation III
Tfu_0419	PWY-5340	sulfate activation for sulfonation
Tfu_0419	PWY-6683	sulfate reduction III (assimilatory)
Tfu_0419	PWY-6932	selenate reduction
Tfu_0420	PWY-5278	sulfite oxidation III
Tfu_0420	PWY-5340	sulfate activation for sulfonation
Tfu_0420	PWY-6683	sulfate reduction III (assimilatory)
Tfu_0420	PWY-6932	selenate reduction
Tfu_0425	PWY-5278	sulfite oxidation III
Tfu_0425	PWY-5340	sulfate activation for sulfonation
Tfu_0425	PWY-6683	sulfate reduction III (assimilatory)
Tfu_0425	PWY-6932	selenate reduction
Tfu_0428	PWY-1042	glycolysis IV (plant cytosol)
Tfu_0428	PWY-1622	formaldehyde assimilation I (serine pathway)
Tfu_0428	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Tfu_0428	PWY-5484	glycolysis II (from fructose 6-phosphate)
Tfu_0428	PWY-5723	Rubisco shunt
Tfu_0428	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Tfu_0428	PWY-6886	1-butanol autotrophic biosynthesis
Tfu_0428	PWY-6901	superpathway of glucose and xylose degradation
Tfu_0428	PWY-7003	glycerol degradation to butanol
Tfu_0428	PWY-7124	ethylene biosynthesis V (engineered)
Tfu_0428	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Tfu_0433	PWY-6853	ethylene biosynthesis II (microbes)
Tfu_0434	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Tfu_0434	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Tfu_0438	PWY-801	L-homocysteine and L-cysteine interconversion
Tfu_0459	PWY-5392	reductive TCA cycle II
Tfu_0459	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Tfu_0459	PWY-5690	TCA cycle II (plants and fungi)
Tfu_0459	PWY-5913	TCA cycle VI (obligate autotrophs)
Tfu_0459	PWY-6728	methylaspartate cycle
Tfu_0459	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Tfu_0459	PWY-7254	TCA cycle VII (acetate-producers)
Tfu_0459	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Tfu_0464	PWY-5484	glycolysis II (from fructose 6-phosphate)
Tfu_0471	PWY-7560	methylerythritol phosphate pathway II
Tfu_0503	PWY-5988	wound-induced proteolysis I
Tfu_0503	PWY-6018	seed germination protein turnover
Tfu_0527	PWY-5381	pyridine nucleotide cycling (plants)
Tfu_0538	PWY-6823	molybdenum cofactor biosynthesis
Tfu_0544	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Tfu_0566	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Tfu_0575	PWY-5316	nicotine biosynthesis
Tfu_0575	PWY-7342	superpathway of nicotine biosynthesis
Tfu_0582	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Tfu_0582	PWY-622	starch biosynthesis
Tfu_0584	PWY-2622	trehalose biosynthesis IV
Tfu_0586	PWY-5941	glycogen degradation II (eukaryotic)
Tfu_0586	PWY-622	starch biosynthesis
Tfu_0586	PWY-6731	starch degradation III
Tfu_0586	PWY-6737	starch degradation V
Tfu_0586	PWY-7238	sucrose biosynthesis II
Tfu_0595	PWY-6823	molybdenum cofactor biosynthesis
Tfu_0595	PWY-6891	thiazole biosynthesis II (Bacillus)
Tfu_0595	PWY-6892	thiazole biosynthesis I (E. coli)
Tfu_0595	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Tfu_0602	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Tfu_0602	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Tfu_0602	PWY-6936	seleno-amino acid biosynthesis
Tfu_0602	PWY-702	L-methionine biosynthesis II
Tfu_0606	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Tfu_0611	PWY-5101	L-isoleucine biosynthesis II
Tfu_0611	PWY-5103	L-isoleucine biosynthesis III
Tfu_0611	PWY-5104	L-isoleucine biosynthesis IV
Tfu_0611	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Tfu_0611	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Tfu_0611	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Tfu_0611	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Tfu_0612	PWY-5101	L-isoleucine biosynthesis II
Tfu_0612	PWY-5103	L-isoleucine biosynthesis III
Tfu_0612	PWY-5104	L-isoleucine biosynthesis IV
Tfu_0612	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Tfu_0612	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Tfu_0612	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Tfu_0612	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Tfu_0613	PWY-5101	L-isoleucine biosynthesis II
Tfu_0613	PWY-5103	L-isoleucine biosynthesis III
Tfu_0613	PWY-5104	L-isoleucine biosynthesis IV
Tfu_0613	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Tfu_0615	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Tfu_0616	PWY-5057	L-valine degradation II
Tfu_0616	PWY-5076	L-leucine degradation III
Tfu_0616	PWY-5078	L-isoleucine degradation II
Tfu_0616	PWY-5101	L-isoleucine biosynthesis II
Tfu_0616	PWY-5103	L-isoleucine biosynthesis III
Tfu_0616	PWY-5104	L-isoleucine biosynthesis IV
Tfu_0616	PWY-5108	L-isoleucine biosynthesis V
Tfu_0617	PWY-5101	L-isoleucine biosynthesis II
Tfu_0617	PWY-6871	3-methylbutanol biosynthesis
Tfu_0623	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Tfu_0629	PWY-5198	factor 420 biosynthesis
Tfu_0631	PWY-5667	CDP-diacylglycerol biosynthesis I
Tfu_0631	PWY-5981	CDP-diacylglycerol biosynthesis III
Tfu_0633	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tfu_0633	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tfu_0643	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Tfu_0643	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Tfu_0643	PWY-6896	thiamin salvage I
Tfu_0643	PWY-6897	thiamin salvage II
Tfu_0665	PWY-6829	tRNA methylation (yeast)
Tfu_0665	PWY-7285	methylwyosine biosynthesis
Tfu_0665	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Tfu_0687	PWY-5642	2,4-dinitrotoluene degradation
Tfu_0687	PWY-6373	acrylate degradation
Tfu_0696	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Tfu_0696	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Tfu_0747	PWY-7560	methylerythritol phosphate pathway II
Tfu_0749	PWY-7560	methylerythritol phosphate pathway II
Tfu_0782	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Tfu_0782	PWY-6167	flavin biosynthesis II (archaea)
Tfu_0782	PWY-6168	flavin biosynthesis III (fungi)
Tfu_0786	PWY-2941	L-lysine biosynthesis II
Tfu_0786	PWY-2942	L-lysine biosynthesis III
Tfu_0786	PWY-5097	L-lysine biosynthesis VI
Tfu_0787	PWY-4261	glycerol degradation I
Tfu_0788	PWY-5839	menaquinol-7 biosynthesis
Tfu_0788	PWY-5851	demethylmenaquinol-9 biosynthesis
Tfu_0788	PWY-5852	demethylmenaquinol-8 biosynthesis I
Tfu_0788	PWY-5853	demethylmenaquinol-6 biosynthesis I
Tfu_0788	PWY-5890	menaquinol-10 biosynthesis
Tfu_0788	PWY-5891	menaquinol-11 biosynthesis
Tfu_0788	PWY-5892	menaquinol-12 biosynthesis
Tfu_0788	PWY-5895	menaquinol-13 biosynthesis
Tfu_0791	PWY-2941	L-lysine biosynthesis II
Tfu_0791	PWY-2942	L-lysine biosynthesis III
Tfu_0791	PWY-5097	L-lysine biosynthesis VI
Tfu_0796	PWY-5269	cardiolipin biosynthesis II
Tfu_0796	PWY-5668	cardiolipin biosynthesis I
Tfu_0815	PWY-2781	<i>cis</i>-zeatin biosynthesis
Tfu_0816	PWY-2941	L-lysine biosynthesis II
Tfu_0816	PWY-5097	L-lysine biosynthesis VI
Tfu_0819	PWY-6728	methylaspartate cycle
Tfu_0819	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Tfu_0819	PWY-7118	chitin degradation to ethanol
Tfu_0819	PWY-7294	xylose degradation IV
Tfu_0819	PWY-7295	L-arabinose degradation IV
Tfu_0850	PWY-6871	3-methylbutanol biosynthesis
Tfu_0863	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Tfu_0863	PWY-6549	L-glutamine biosynthesis III
Tfu_0863	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Tfu_0863	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Tfu_0868	PWY-6902	chitin degradation II
Tfu_0874	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Tfu_0881	PWY-3781	aerobic respiration I (cytochrome c)
Tfu_0881	PWY-4521	arsenite oxidation I (respiratory)
Tfu_0881	PWY-6692	Fe(II) oxidation
Tfu_0881	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Tfu_0908	PWY-5386	methylglyoxal degradation I
Tfu_0922	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Tfu_0922	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Tfu_0927	PWY-5686	UMP biosynthesis
Tfu_0937	PWY-3121	linamarin degradation
Tfu_0937	PWY-5176	coumarin biosynthesis (via 2-coumarate)
Tfu_0937	PWY-6002	lotaustralin degradation
Tfu_0937	PWY-6788	cellulose degradation II (fungi)
Tfu_0937	PWY-7089	taxiphyllin bioactivation
Tfu_0937	PWY-7091	linustatin bioactivation
Tfu_0937	PWY-7092	neolinustatin bioactivation
Tfu_0948	PWY-4381	fatty acid biosynthesis initiation I
Tfu_0948	PWY-5743	3-hydroxypropanoate cycle
Tfu_0948	PWY-5744	glyoxylate assimilation
Tfu_0948	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Tfu_0948	PWY-6679	jadomycin biosynthesis
Tfu_0948	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Tfu_0957	PWY-6854	ethylene biosynthesis III (microbes)
Tfu_0960	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Tfu_0960	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Tfu_0981	PWY-6654	phosphopantothenate biosynthesis III
Tfu_0982	PWY-381	nitrate reduction II (assimilatory)
Tfu_0982	PWY-5675	nitrate reduction V (assimilatory)
Tfu_0982	PWY-6549	L-glutamine biosynthesis III
Tfu_0982	PWY-6963	ammonia assimilation cycle I
Tfu_0982	PWY-6964	ammonia assimilation cycle II
Tfu_0983	PWY-5381	pyridine nucleotide cycling (plants)
Tfu_0983	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Tfu_0985	PWY-842	starch degradation I
Tfu_0988	PWY-381	nitrate reduction II (assimilatory)
Tfu_0988	PWY-5675	nitrate reduction V (assimilatory)
Tfu_0988	PWY-6549	L-glutamine biosynthesis III
Tfu_0988	PWY-6963	ammonia assimilation cycle I
Tfu_0988	PWY-6964	ammonia assimilation cycle II
Tfu_0991	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Tfu_0991	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Tfu_0991	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Tfu_0992	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Tfu_0992	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Tfu_0994	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Tfu_0994	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Tfu_0995	PWY-5988	wound-induced proteolysis I
Tfu_0995	PWY-6018	seed germination protein turnover
Tfu_0996	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Tfu_0996	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Tfu_0996	PWY-6269	adenosylcobalamin salvage from cobinamide II
Tfu_0997	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Tfu_0997	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Tfu_0997	PWY-6269	adenosylcobalamin salvage from cobinamide II
Tfu_1016	PWY-3781	aerobic respiration I (cytochrome c)
Tfu_1016	PWY-4521	arsenite oxidation I (respiratory)
Tfu_1016	PWY-6692	Fe(II) oxidation
Tfu_1016	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Tfu_1017	PWY-3781	aerobic respiration I (cytochrome c)
Tfu_1017	PWY-4521	arsenite oxidation I (respiratory)
Tfu_1017	PWY-6692	Fe(II) oxidation
Tfu_1017	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Tfu_1033	PWY-2723	trehalose degradation V
Tfu_1033	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Tfu_1033	PWY-5661	GDP-glucose biosynthesis
Tfu_1033	PWY-7238	sucrose biosynthesis II
Tfu_1033	PWY-7385	1,3-propanediol biosynthesis (engineered)
Tfu_1037	PWY-1042	glycolysis IV (plant cytosol)
Tfu_1037	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Tfu_1037	PWY-5484	glycolysis II (from fructose 6-phosphate)
Tfu_1037	PWY-7385	1,3-propanediol biosynthesis (engineered)
Tfu_1039	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Tfu_1039	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Tfu_1039	PWY-6164	3-dehydroquinate biosynthesis I
Tfu_1042	PWY-6891	thiazole biosynthesis II (Bacillus)
Tfu_1042	PWY-6892	thiazole biosynthesis I (E. coli)
Tfu_1046	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Tfu_1046	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Tfu_1046	PWY-6897	thiamin salvage II
Tfu_1046	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Tfu_1046	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Tfu_1046	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Tfu_1046	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Tfu_1050	PWY-2201	folate transformations I
Tfu_1050	PWY-3841	folate transformations II
Tfu_1053	PWY-7183	pyrimidine nucleobases salvage I
Tfu_1054	PWY-5686	UMP biosynthesis
Tfu_1055	PWY-5686	UMP biosynthesis
Tfu_1056	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Tfu_1056	PWY-5686	UMP biosynthesis
Tfu_1056	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Tfu_1057	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Tfu_1057	PWY-5686	UMP biosynthesis
Tfu_1057	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Tfu_1060	PWY-5686	UMP biosynthesis
Tfu_1062	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Tfu_1065	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Tfu_1065	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Tfu_1077	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Tfu_1077	PWY-5723	Rubisco shunt
Tfu_1078	PWY-6167	flavin biosynthesis II (archaea)
Tfu_1078	PWY-6168	flavin biosynthesis III (fungi)
Tfu_1078	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Tfu_1080	PWY-6167	flavin biosynthesis II (archaea)
Tfu_1080	PWY-6168	flavin biosynthesis III (fungi)
Tfu_1080	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Tfu_1081	PWY-6167	flavin biosynthesis II (archaea)
Tfu_1081	PWY-6168	flavin biosynthesis III (fungi)
Tfu_1090	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Tfu_1091	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Tfu_1092	PWY-6164	3-dehydroquinate biosynthesis I
Tfu_1106	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tfu_1106	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tfu_1107	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Tfu_1107	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Tfu_1107	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Tfu_1108	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tfu_1108	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tfu_1110	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Tfu_1110	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Tfu_1110	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Tfu_1110	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Tfu_1111	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tfu_1111	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tfu_1115	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Tfu_1179	PWY-1042	glycolysis IV (plant cytosol)
Tfu_1179	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Tfu_1179	PWY-5484	glycolysis II (from fructose 6-phosphate)
Tfu_1179	PWY-5723	Rubisco shunt
Tfu_1179	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Tfu_1179	PWY-6886	1-butanol autotrophic biosynthesis
Tfu_1179	PWY-6901	superpathway of glucose and xylose degradation
Tfu_1179	PWY-7003	glycerol degradation to butanol
Tfu_1179	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Tfu_1179	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Tfu_1199	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Tfu_1199	PWY-7177	UTP and CTP dephosphorylation II
Tfu_1199	PWY-7185	UTP and CTP dephosphorylation I
Tfu_1207	PWY-3461	L-tyrosine biosynthesis II
Tfu_1207	PWY-3462	L-phenylalanine biosynthesis II
Tfu_1207	PWY-6120	L-tyrosine biosynthesis III
Tfu_1207	PWY-6627	salinosporamide A biosynthesis
Tfu_1209	PWY-7205	CMP phosphorylation
Tfu_1213	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Tfu_1215	PWY-4381	fatty acid biosynthesis initiation I
Tfu_1215	PWY-5743	3-hydroxypropanoate cycle
Tfu_1215	PWY-5744	glyoxylate assimilation
Tfu_1215	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Tfu_1215	PWY-6679	jadomycin biosynthesis
Tfu_1215	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Tfu_1229	PWY-4381	fatty acid biosynthesis initiation I
Tfu_1302	PWY-5392	reductive TCA cycle II
Tfu_1302	PWY-5537	pyruvate fermentation to acetate V
Tfu_1302	PWY-5538	pyruvate fermentation to acetate VI
Tfu_1302	PWY-5690	TCA cycle II (plants and fungi)
Tfu_1302	PWY-5913	TCA cycle VI (obligate autotrophs)
Tfu_1302	PWY-6728	methylaspartate cycle
Tfu_1302	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Tfu_1302	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Tfu_1311	PWY-5392	reductive TCA cycle II
Tfu_1311	PWY-5537	pyruvate fermentation to acetate V
Tfu_1311	PWY-5538	pyruvate fermentation to acetate VI
Tfu_1311	PWY-5690	TCA cycle II (plants and fungi)
Tfu_1311	PWY-5913	TCA cycle VI (obligate autotrophs)
Tfu_1311	PWY-6728	methylaspartate cycle
Tfu_1311	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Tfu_1311	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Tfu_1314	PWY-6614	tetrahydrofolate biosynthesis
Tfu_1348	PWY-6823	molybdenum cofactor biosynthesis
Tfu_1377	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Tfu_1386	PWY-5958	acridone alkaloid biosynthesis
Tfu_1386	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Tfu_1386	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Tfu_1387	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Tfu_1393	PWY-5269	cardiolipin biosynthesis II
Tfu_1393	PWY-5668	cardiolipin biosynthesis I
Tfu_1394	PWY-6749	CMP-legionaminate biosynthesis I
Tfu_1409	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Tfu_1409	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Tfu_1410	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Tfu_1410	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Tfu_1411	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Tfu_1411	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Tfu_1413	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Tfu_1413	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Tfu_1413	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Tfu_1413	PWY-6406	salicylate biosynthesis I
Tfu_1418	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Tfu_1418	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Tfu_1469	PWY-723	alkylnitronates degradation
Tfu_1473	PWY-5392	reductive TCA cycle II
Tfu_1473	PWY-5537	pyruvate fermentation to acetate V
Tfu_1473	PWY-5538	pyruvate fermentation to acetate VI
Tfu_1473	PWY-5690	TCA cycle II (plants and fungi)
Tfu_1473	PWY-5913	TCA cycle VI (obligate autotrophs)
Tfu_1473	PWY-6728	methylaspartate cycle
Tfu_1473	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Tfu_1473	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Tfu_1530	PWY-4381	fatty acid biosynthesis initiation I
Tfu_1530	PWY-5743	3-hydroxypropanoate cycle
Tfu_1530	PWY-5744	glyoxylate assimilation
Tfu_1530	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Tfu_1530	PWY-6679	jadomycin biosynthesis
Tfu_1530	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Tfu_1547	PWY-7158	L-phenylalanine degradation V
Tfu_1571	PWY-6825	phosphatidylcholine biosynthesis V
Tfu_1572	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Tfu_1575	PWY-4261	glycerol degradation I
Tfu_1604	PWY-4261	glycerol degradation I
Tfu_1615	PWY-6807	xyloglucan degradation II (exoglucanase)
Tfu_1627	PWY-6788	cellulose degradation II (fungi)
Tfu_1629	PWY-3121	linamarin degradation
Tfu_1629	PWY-5176	coumarin biosynthesis (via 2-coumarate)
Tfu_1629	PWY-6002	lotaustralin degradation
Tfu_1629	PWY-6788	cellulose degradation II (fungi)
Tfu_1629	PWY-7089	taxiphyllin bioactivation
Tfu_1629	PWY-7091	linustatin bioactivation
Tfu_1629	PWY-7092	neolinustatin bioactivation
Tfu_1635	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Tfu_1635	PWY-6416	quinate degradation II
Tfu_1635	PWY-6707	gallate biosynthesis
Tfu_1640	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tfu_1640	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tfu_1649	PWY-5506	methanol oxidation to formaldehyde IV
Tfu_1666	PWY-5958	acridone alkaloid biosynthesis
Tfu_1666	PWY-6543	4-aminobenzoate biosynthesis
Tfu_1666	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Tfu_1666	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Tfu_1666	PWY-6722	candicidin biosynthesis
Tfu_1695	PWY-3781	aerobic respiration I (cytochrome c)
Tfu_1695	PWY-4521	arsenite oxidation I (respiratory)
Tfu_1695	PWY-6692	Fe(II) oxidation
Tfu_1695	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Tfu_1715	PWY-2941	L-lysine biosynthesis II
Tfu_1715	PWY-2942	L-lysine biosynthesis III
Tfu_1715	PWY-5097	L-lysine biosynthesis VI
Tfu_1722	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Tfu_1722	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Tfu_1750	PWY-621	sucrose degradation III (sucrose invertase)
Tfu_1766	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Tfu_1766	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Tfu_1766	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Tfu_1810	PWY-6829	tRNA methylation (yeast)
Tfu_1825	PWY-2201	folate transformations I
Tfu_1825	PWY-3841	folate transformations II
Tfu_1842	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Tfu_1842	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Tfu_1842	PWY-5989	stearate biosynthesis II (bacteria and plants)
Tfu_1842	PWY-6113	superpathway of mycolate biosynthesis
Tfu_1842	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Tfu_1842	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Tfu_1842	PWY-7096	triclosan resistance
Tfu_1842	PWYG-321	mycolate biosynthesis
Tfu_1843	PWY-5367	petroselinate biosynthesis
Tfu_1843	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Tfu_1843	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Tfu_1843	PWY-5989	stearate biosynthesis II (bacteria and plants)
Tfu_1843	PWY-5994	palmitate biosynthesis I (animals and fungi)
Tfu_1843	PWY-6113	superpathway of mycolate biosynthesis
Tfu_1843	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Tfu_1843	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Tfu_1843	PWY-6951	Tfu_1843
Tfu_1843	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Tfu_1843	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Tfu_1843	PWYG-321	mycolate biosynthesis
Tfu_1855	PWY-6012	acyl carrier protein metabolism I
Tfu_1855	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Tfu_1862	PWY-5155	&beta;-alanine biosynthesis III
Tfu_1870	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Tfu_1872	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Tfu_1872	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Tfu_1872	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Tfu_1872	PWY-6406	salicylate biosynthesis I
Tfu_1873	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Tfu_1888	PWY-6683	sulfate reduction III (assimilatory)
Tfu_1890	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Tfu_1894	PWY-5669	phosphatidylethanolamine biosynthesis I
Tfu_1897	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Tfu_1897	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Tfu_1899	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Tfu_1899	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Tfu_1904	PWY-1361	benzoyl-CoA degradation I (aerobic)
Tfu_1904	PWY-5109	2-methylbutanoate biosynthesis
Tfu_1904	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Tfu_1904	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Tfu_1904	PWY-5177	glutaryl-CoA degradation
Tfu_1904	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Tfu_1904	PWY-6435	4-hydroxybenzoate biosynthesis V
Tfu_1904	PWY-6583	pyruvate fermentation to butanol I
Tfu_1904	PWY-6863	pyruvate fermentation to hexanol
Tfu_1904	PWY-6883	pyruvate fermentation to butanol II
Tfu_1904	PWY-6944	androstenedione degradation
Tfu_1904	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Tfu_1904	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Tfu_1904	PWY-7007	methyl ketone biosynthesis
Tfu_1904	PWY-7046	4-coumarate degradation (anaerobic)
Tfu_1904	PWY-7094	fatty acid salvage
Tfu_1904	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Tfu_1904	PWY-735	jasmonic acid biosynthesis
Tfu_1904	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Tfu_1917	PWY-6891	thiazole biosynthesis II (Bacillus)
Tfu_1917	PWY-6892	thiazole biosynthesis I (E. coli)
Tfu_1917	PWY-7560	methylerythritol phosphate pathway II
Tfu_1935	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Tfu_1935	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Tfu_1935	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Tfu_1935	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Tfu_1946	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tfu_1946	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tfu_1955	PWY-5663	tetrahydrobiopterin biosynthesis I
Tfu_1955	PWY-5664	tetrahydrobiopterin biosynthesis II
Tfu_1955	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Tfu_1955	PWY-6703	preQ<sub>0</sub> biosynthesis
Tfu_1955	PWY-6983	tetrahydrobiopterin biosynthesis III
Tfu_1955	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Tfu_1974	PWY-4381	fatty acid biosynthesis initiation I
Tfu_1983	PWY-6823	molybdenum cofactor biosynthesis
Tfu_1983	PWY-6891	thiazole biosynthesis II (Bacillus)
Tfu_1983	PWY-6892	thiazole biosynthesis I (E. coli)
Tfu_1983	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Tfu_1992	PWY-4981	L-proline biosynthesis II (from arginine)
Tfu_1992	PWY-4984	urea cycle
Tfu_1992	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Tfu_1993	PWY-4981	L-proline biosynthesis II (from arginine)
Tfu_2002	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Tfu_2002	PWY-5723	Rubisco shunt
Tfu_2002	PWY-6891	thiazole biosynthesis II (Bacillus)
Tfu_2002	PWY-6892	thiazole biosynthesis I (E. coli)
Tfu_2002	PWY-6901	superpathway of glucose and xylose degradation
Tfu_2002	PWY-7560	methylerythritol phosphate pathway II
Tfu_2003	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Tfu_2003	PWY-5723	Rubisco shunt
Tfu_2004	PWY-3801	sucrose degradation II (sucrose synthase)
Tfu_2004	PWY-5054	sorbitol biosynthesis I
Tfu_2004	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Tfu_2004	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Tfu_2004	PWY-5659	GDP-mannose biosynthesis
Tfu_2004	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Tfu_2004	PWY-621	sucrose degradation III (sucrose invertase)
Tfu_2004	PWY-622	starch biosynthesis
Tfu_2004	PWY-6531	mannitol cycle
Tfu_2004	PWY-6981	chitin biosynthesis
Tfu_2004	PWY-7238	sucrose biosynthesis II
Tfu_2004	PWY-7347	sucrose biosynthesis III
Tfu_2004	PWY-7385	1,3-propanediol biosynthesis (engineered)
Tfu_2005	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Tfu_2007	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Tfu_2007	PWY-6855	chitin degradation I (archaea)
Tfu_2007	PWY-6906	chitin derivatives degradation
Tfu_2015	PWY-1042	glycolysis IV (plant cytosol)
Tfu_2015	PWY-5484	glycolysis II (from fructose 6-phosphate)
Tfu_2015	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Tfu_2015	PWY-7003	glycerol degradation to butanol
Tfu_2016	PWY-1042	glycolysis IV (plant cytosol)
Tfu_2016	PWY-5484	glycolysis II (from fructose 6-phosphate)
Tfu_2016	PWY-6886	1-butanol autotrophic biosynthesis
Tfu_2016	PWY-6901	superpathway of glucose and xylose degradation
Tfu_2016	PWY-7003	glycerol degradation to butanol
Tfu_2017	PWY-1042	glycolysis IV (plant cytosol)
Tfu_2017	PWY-5484	glycolysis II (from fructose 6-phosphate)
Tfu_2017	PWY-6901	superpathway of glucose and xylose degradation
Tfu_2017	PWY-7003	glycerol degradation to butanol
Tfu_2030	PWY-6898	thiamin salvage III
Tfu_2030	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Tfu_2030	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Tfu_2033	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Tfu_2033	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Tfu_2033	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Tfu_2051	PWY-4983	L-citrulline-nitric oxide cycle
Tfu_2051	PWY-4984	urea cycle
Tfu_2051	PWY-5	canavanine biosynthesis
Tfu_2051	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Tfu_2051	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Tfu_2052	PWY-4983	L-citrulline-nitric oxide cycle
Tfu_2052	PWY-4984	urea cycle
Tfu_2052	PWY-5	canavanine biosynthesis
Tfu_2052	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Tfu_2052	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Tfu_2055	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Tfu_2055	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Tfu_2056	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Tfu_2057	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Tfu_2057	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Tfu_2067	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Tfu_2091	PWY-6605	adenine and adenosine salvage II
Tfu_2091	PWY-6610	adenine and adenosine salvage IV
Tfu_2097	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
Tfu_2099	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
Tfu_2114	PWY-5530	sorbitol biosynthesis II
Tfu_2114	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Tfu_2115	PWY-6823	molybdenum cofactor biosynthesis
Tfu_2128	PWY-5392	reductive TCA cycle II
Tfu_2128	PWY-5537	pyruvate fermentation to acetate V
Tfu_2128	PWY-5538	pyruvate fermentation to acetate VI
Tfu_2128	PWY-5690	TCA cycle II (plants and fungi)
Tfu_2128	PWY-5913	TCA cycle VI (obligate autotrophs)
Tfu_2128	PWY-6728	methylaspartate cycle
Tfu_2128	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Tfu_2128	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Tfu_2132	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Tfu_2132	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Tfu_2132	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Tfu_2132	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Tfu_2149	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Tfu_2149	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Tfu_2149	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Tfu_2149	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Tfu_2149	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Tfu_2149	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Tfu_2149	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Tfu_2149	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Tfu_2161	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tfu_2161	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tfu_2162	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tfu_2162	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tfu_2171	PWY-5381	pyridine nucleotide cycling (plants)
Tfu_2171	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Tfu_2176	PWY-6788	cellulose degradation II (fungi)
Tfu_2188	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Tfu_2188	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Tfu_2188	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Tfu_2188	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Tfu_2188	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Tfu_2188	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Tfu_2188	PWY-7205	CMP phosphorylation
Tfu_2188	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Tfu_2188	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Tfu_2188	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Tfu_2188	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Tfu_2188	PWY-7224	purine deoxyribonucleosides salvage
Tfu_2188	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Tfu_2188	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Tfu_2190	PWY-2161	folate polyglutamylation
Tfu_2202	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Tfu_2202	PWY-5723	Rubisco shunt
Tfu_2204	PWY-4061	glutathione-mediated detoxification I
Tfu_2204	PWY-6842	glutathione-mediated detoxification II
Tfu_2204	PWY-7112	4-hydroxy-2-nonenal detoxification
Tfu_2205	PWY-5941	glycogen degradation II (eukaryotic)
Tfu_2205	PWY-6724	starch degradation II
Tfu_2205	PWY-6737	starch degradation V
Tfu_2205	PWY-7238	sucrose biosynthesis II
Tfu_2207	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Tfu_2209	PWY-5101	L-isoleucine biosynthesis II
Tfu_2209	PWY-5103	L-isoleucine biosynthesis III
Tfu_2209	PWY-5104	L-isoleucine biosynthesis IV
Tfu_2209	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Tfu_2221	PWY-5194	siroheme biosynthesis
Tfu_2221	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Tfu_2222	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Tfu_2222	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Tfu_2222	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Tfu_2222	PWY-6269	adenosylcobalamin salvage from cobinamide II
Tfu_2239	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Tfu_2239	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
Tfu_2239	PWY-6920	6-gingerol analog biosynthesis
Tfu_2239	PWY-7007	methyl ketone biosynthesis
Tfu_2239	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
Tfu_2239	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
Tfu_2239	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
Tfu_2239	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
Tfu_2239	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
Tfu_2239	PWY-735	jasmonic acid biosynthesis
Tfu_2242	PWY-4202	arsenate detoxification I (glutaredoxin)
Tfu_2242	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Tfu_2242	PWY-6608	guanosine nucleotides degradation III
Tfu_2242	PWY-6609	adenine and adenosine salvage III
Tfu_2242	PWY-6611	adenine and adenosine salvage V
Tfu_2242	PWY-6620	guanine and guanosine salvage
Tfu_2242	PWY-6627	salinosporamide A biosynthesis
Tfu_2242	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Tfu_2242	PWY-7179	purine deoxyribonucleosides degradation I
Tfu_2242	PWY-7179-1	purine deoxyribonucleosides degradation
Tfu_2247	PWY-3341	L-proline biosynthesis III
Tfu_2247	PWY-4981	L-proline biosynthesis II (from arginine)
Tfu_2247	PWY-6344	L-ornithine degradation II (Stickland reaction)
Tfu_2247	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Tfu_2250	PWY-6910	hydroxymethylpyrimidine salvage
Tfu_2250	PWY-7356	thiamin salvage IV (yeast)
Tfu_2250	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Tfu_2318	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Tfu_2318	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Tfu_2345	PWY-5874	heme degradation
Tfu_2345	PWY-5915	phycoerythrobilin biosynthesis I
Tfu_2345	PWY-5917	phycocyanobilin biosynthesis
Tfu_2345	PWY-7170	phytochromobilin biosynthesis
Tfu_2350	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Tfu_2350	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Tfu_2350	PWY-6164	3-dehydroquinate biosynthesis I
Tfu_2353	PWY-1622	formaldehyde assimilation I (serine pathway)
Tfu_2353	PWY-181	photorespiration
Tfu_2353	PWY-2161	folate polyglutamylation
Tfu_2353	PWY-2201	folate transformations I
Tfu_2353	PWY-3661	glycine betaine degradation I
Tfu_2353	PWY-3661-1	glycine betaine degradation II (mammalian)
Tfu_2353	PWY-3841	folate transformations II
Tfu_2353	PWY-5497	purine nucleobases degradation II (anaerobic)
Tfu_2356	PWY-2201	folate transformations I
Tfu_2356	PWY-5497	purine nucleobases degradation II (anaerobic)
Tfu_2357	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Tfu_2364	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Tfu_2368	PWY-6936	seleno-amino acid biosynthesis
Tfu_2373	PWY-5381	pyridine nucleotide cycling (plants)
Tfu_2391	PWY-7205	CMP phosphorylation
Tfu_2395	PWY-5743	3-hydroxypropanoate cycle
Tfu_2395	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Tfu_2395	PWY-6728	methylaspartate cycle
Tfu_2395	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Tfu_2399	PWY-1361	benzoyl-CoA degradation I (aerobic)
Tfu_2399	PWY-5109	2-methylbutanoate biosynthesis
Tfu_2399	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Tfu_2399	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Tfu_2399	PWY-5177	glutaryl-CoA degradation
Tfu_2399	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Tfu_2399	PWY-6435	4-hydroxybenzoate biosynthesis V
Tfu_2399	PWY-6583	pyruvate fermentation to butanol I
Tfu_2399	PWY-6863	pyruvate fermentation to hexanol
Tfu_2399	PWY-6883	pyruvate fermentation to butanol II
Tfu_2399	PWY-6944	androstenedione degradation
Tfu_2399	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Tfu_2399	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Tfu_2399	PWY-7007	methyl ketone biosynthesis
Tfu_2399	PWY-7046	4-coumarate degradation (anaerobic)
Tfu_2399	PWY-7094	fatty acid salvage
Tfu_2399	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Tfu_2399	PWY-735	jasmonic acid biosynthesis
Tfu_2399	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Tfu_2404	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Tfu_2404	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Tfu_2404	PWY-6268	adenosylcobalamin salvage from cobalamin
Tfu_2404	PWY-6269	adenosylcobalamin salvage from cobinamide II
Tfu_2407	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Tfu_2409	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Tfu_2416	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Tfu_2416	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Tfu_2416	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Tfu_2421	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Tfu_2422	PWY-702	L-methionine biosynthesis II
Tfu_2425	PWY-2941	L-lysine biosynthesis II
Tfu_2425	PWY-2942	L-lysine biosynthesis III
Tfu_2425	PWY-5097	L-lysine biosynthesis VI
Tfu_2430	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Tfu_2440	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Tfu_2440	PWY-6596	adenosine nucleotides degradation I
Tfu_2440	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Tfu_2451	PWY-3781	aerobic respiration I (cytochrome c)
Tfu_2451	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Tfu_2451	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Tfu_2451	PWY-5690	TCA cycle II (plants and fungi)
Tfu_2451	PWY-6728	methylaspartate cycle
Tfu_2451	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Tfu_2451	PWY-7254	TCA cycle VII (acetate-producers)
Tfu_2451	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Tfu_2452	PWY-3781	aerobic respiration I (cytochrome c)
Tfu_2452	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Tfu_2452	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Tfu_2452	PWY-5690	TCA cycle II (plants and fungi)
Tfu_2452	PWY-6728	methylaspartate cycle
Tfu_2452	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Tfu_2452	PWY-7254	TCA cycle VII (acetate-producers)
Tfu_2452	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Tfu_2461	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tfu_2461	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tfu_2467	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Tfu_2473	PWY-6906	chitin derivatives degradation
Tfu_2473	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Tfu_2473	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Tfu_2481	PWY-5022	4-aminobutanoate degradation V
Tfu_2481	PWY-6728	methylaspartate cycle
Tfu_2481	PWY-7126	ethylene biosynthesis IV
Tfu_2505	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Tfu_2508	PWY-3801	sucrose degradation II (sucrose synthase)
Tfu_2508	PWY-3861	mannitol degradation II
Tfu_2508	PWY-3881	mannitol biosynthesis
Tfu_2508	PWY-5054	sorbitol biosynthesis I
Tfu_2508	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Tfu_2508	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Tfu_2508	PWY-5659	GDP-mannose biosynthesis
Tfu_2508	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Tfu_2508	PWY-621	sucrose degradation III (sucrose invertase)
Tfu_2508	PWY-622	starch biosynthesis
Tfu_2508	PWY-6531	mannitol cycle
Tfu_2508	PWY-6981	chitin biosynthesis
Tfu_2508	PWY-7238	sucrose biosynthesis II
Tfu_2508	PWY-7347	sucrose biosynthesis III
Tfu_2508	PWY-7385	1,3-propanediol biosynthesis (engineered)
Tfu_2508	PWY-7456	mannan degradation
Tfu_2508	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Tfu_2510	PWY-6749	CMP-legionaminate biosynthesis I
Tfu_2517	PWY-5198	factor 420 biosynthesis
Tfu_2518	PWY-5199	factor 420 polyglutamylation
Tfu_2519	PWY-5198	factor 420 biosynthesis
Tfu_2533	PWY-6349	CDP-archaeol biosynthesis
Tfu_2539	PWY-7560	methylerythritol phosphate pathway II
Tfu_2544	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Tfu_2546	PWY-6123	inosine-5'-phosphate biosynthesis I
Tfu_2546	PWY-7234	inosine-5'-phosphate biosynthesis III
Tfu_2553	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Tfu_2553	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Tfu_2554	PWY-1622	formaldehyde assimilation I (serine pathway)
Tfu_2554	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Tfu_2554	PWY-5913	TCA cycle VI (obligate autotrophs)
Tfu_2554	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Tfu_2554	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Tfu_2554	PWY-6549	L-glutamine biosynthesis III
Tfu_2554	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Tfu_2554	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Tfu_2554	PWY-7124	ethylene biosynthesis V (engineered)
Tfu_2555	PWY-4381	fatty acid biosynthesis initiation I
Tfu_2555	PWY-5743	3-hydroxypropanoate cycle
Tfu_2555	PWY-5744	glyoxylate assimilation
Tfu_2555	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Tfu_2555	PWY-6679	jadomycin biosynthesis
Tfu_2555	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Tfu_2560	PWY-4041	&gamma;-glutamyl cycle
Tfu_2563	PWY-6609	adenine and adenosine salvage III
Tfu_2563	PWY-6611	adenine and adenosine salvage V
Tfu_2563	PWY-7179	purine deoxyribonucleosides degradation I
Tfu_2563	PWY-7179-1	purine deoxyribonucleosides degradation
Tfu_2565	PWY-6840	homoglutathione biosynthesis
Tfu_2565	PWY-7255	ergothioneine biosynthesis I (bacteria)
Tfu_2566	PWY-3821	galactose degradation III
Tfu_2566	PWY-6317	galactose degradation I (Leloir pathway)
Tfu_2566	PWY-6527	stachyose degradation
Tfu_2568	PWY-5913	TCA cycle VI (obligate autotrophs)
Tfu_2568	PWY-6549	L-glutamine biosynthesis III
Tfu_2568	PWY-6728	methylaspartate cycle
Tfu_2568	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Tfu_2568	PWY-7124	ethylene biosynthesis V (engineered)
Tfu_2568	PWY-7254	TCA cycle VII (acetate-producers)
Tfu_2568	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Tfu_2571	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Tfu_2571	PWY-2201	folate transformations I
Tfu_2571	PWY-3841	folate transformations II
Tfu_2571	PWY-5030	L-histidine degradation III
Tfu_2571	PWY-5497	purine nucleobases degradation II (anaerobic)
Tfu_2571	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Tfu_2572	PWY-6123	inosine-5'-phosphate biosynthesis I
Tfu_2572	PWY-6124	inosine-5'-phosphate biosynthesis II
Tfu_2572	PWY-7234	inosine-5'-phosphate biosynthesis III
Tfu_2573	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Tfu_2573	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Tfu_2576	PWY-5392	reductive TCA cycle II
Tfu_2576	PWY-5537	pyruvate fermentation to acetate V
Tfu_2576	PWY-5538	pyruvate fermentation to acetate VI
Tfu_2576	PWY-5690	TCA cycle II (plants and fungi)
Tfu_2576	PWY-5913	TCA cycle VI (obligate autotrophs)
Tfu_2576	PWY-6728	methylaspartate cycle
Tfu_2576	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Tfu_2576	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Tfu_2577	PWY-5392	reductive TCA cycle II
Tfu_2577	PWY-5537	pyruvate fermentation to acetate V
Tfu_2577	PWY-5538	pyruvate fermentation to acetate VI
Tfu_2577	PWY-5690	TCA cycle II (plants and fungi)
Tfu_2577	PWY-5913	TCA cycle VI (obligate autotrophs)
Tfu_2577	PWY-6728	methylaspartate cycle
Tfu_2577	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Tfu_2577	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Tfu_2589	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Tfu_2591	PWY-3821	galactose degradation III
Tfu_2591	PWY-6317	galactose degradation I (Leloir pathway)
Tfu_2591	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Tfu_2591	PWY-6527	stachyose degradation
Tfu_2591	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Tfu_2591	PWY-7344	UDP-D-galactose biosynthesis
Tfu_2593	PWY-4261	glycerol degradation I
Tfu_2593	PWY-6118	glycerol-3-phosphate shuttle
Tfu_2593	PWY-6952	glycerophosphodiester degradation
Tfu_2596	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Tfu_2596	PWY-6596	adenosine nucleotides degradation I
Tfu_2596	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Tfu_2606	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Tfu_2608	PWY-6938	NADH repair
Tfu_2610	PWY-3961	phosphopantothenate biosynthesis II
Tfu_2611	PWY-6749	CMP-legionaminate biosynthesis I
Tfu_2612	PWY-6749	CMP-legionaminate biosynthesis I
Tfu_2625	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Tfu_2664	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tfu_2664	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tfu_2683	PWY-3781	aerobic respiration I (cytochrome c)
Tfu_2683	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Tfu_2683	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Tfu_2683	PWY-6692	Fe(II) oxidation
Tfu_2697	PWY-5839	menaquinol-7 biosynthesis
Tfu_2697	PWY-5844	menaquinol-9 biosynthesis
Tfu_2697	PWY-5849	menaquinol-6 biosynthesis
Tfu_2697	PWY-5890	menaquinol-10 biosynthesis
Tfu_2697	PWY-5891	menaquinol-11 biosynthesis
Tfu_2697	PWY-5892	menaquinol-12 biosynthesis
Tfu_2697	PWY-5895	menaquinol-13 biosynthesis
Tfu_2708	PWY-3341	L-proline biosynthesis III
Tfu_2708	PWY-4981	L-proline biosynthesis II (from arginine)
Tfu_2708	PWY-6344	L-ornithine degradation II (Stickland reaction)
Tfu_2719	PWY-5350	thiosulfate disproportionation III (rhodanese)
Tfu_2726	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Tfu_2730	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Tfu_2730	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Tfu_2731	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Tfu_2731	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Tfu_2731	PWY-5194	siroheme biosynthesis
Tfu_2731	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Tfu_2732	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Tfu_2732	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Tfu_2733	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Tfu_2747	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Tfu_2747	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Tfu_2747	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Tfu_2747	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Tfu_2748	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Tfu_2748	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Tfu_2748	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Tfu_2761	PWY-5743	3-hydroxypropanoate cycle
Tfu_2761	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Tfu_2761	PWY-6728	methylaspartate cycle
Tfu_2761	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Tfu_2762	PWY-5743	3-hydroxypropanoate cycle
Tfu_2762	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Tfu_2762	PWY-6728	methylaspartate cycle
Tfu_2762	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Tfu_2766	PWY-6854	ethylene biosynthesis III (microbes)
Tfu_2783	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Tfu_2783	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Tfu_2783	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Tfu_2783	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Tfu_2783	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Tfu_2783	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Tfu_2791	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Tfu_2794	PWY-6523	nitrite-dependent anaerobic methane oxidation
Tfu_2794	PWY-6748	nitrate reduction VII (denitrification)
Tfu_2794	PWY-7084	nitrifier denitrification
Tfu_2801	PWY-6349	CDP-archaeol biosynthesis
Tfu_2811	PWY-5743	3-hydroxypropanoate cycle
Tfu_2811	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Tfu_2811	PWY-6728	methylaspartate cycle
Tfu_2811	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Tfu_2822	PWY-5344	L-homocysteine biosynthesis
Tfu_2823	PWY-5344	L-homocysteine biosynthesis
Tfu_2823	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Tfu_2844	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tfu_2844	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tfu_2856	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Tfu_2856	PWY-7118	chitin degradation to ethanol
Tfu_2882	PWY-3961	phosphopantothenate biosynthesis II
Tfu_2883	PWY-5316	nicotine biosynthesis
Tfu_2883	PWY-5381	pyridine nucleotide cycling (plants)
Tfu_2883	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Tfu_2883	PWY-7342	superpathway of nicotine biosynthesis
Tfu_2890	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Tfu_2890	PWY-6148	tetrahydromethanopterin biosynthesis
Tfu_2890	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Tfu_2890	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Tfu_2891	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Tfu_2891	PWY-6148	tetrahydromethanopterin biosynthesis
Tfu_2891	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Tfu_2891	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Tfu_2893	PWY-6614	tetrahydrofolate biosynthesis
Tfu_2894	PWY-5663	tetrahydrobiopterin biosynthesis I
Tfu_2894	PWY-5664	tetrahydrobiopterin biosynthesis II
Tfu_2894	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Tfu_2894	PWY-6703	preQ<sub>0</sub> biosynthesis
Tfu_2894	PWY-6983	tetrahydrobiopterin biosynthesis III
Tfu_2894	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Tfu_2896	PWY-6599	guanine and guanosine salvage II
Tfu_2896	PWY-6609	adenine and adenosine salvage III
Tfu_2896	PWY-6610	adenine and adenosine salvage IV
Tfu_2896	PWY-6620	guanine and guanosine salvage
Tfu_2903	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Tfu_2903	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Tfu_2906	PWY-7560	methylerythritol phosphate pathway II
Tfu_2911	PWY-1622	formaldehyde assimilation I (serine pathway)
Tfu_2911	PWY-5484	glycolysis II (from fructose 6-phosphate)
Tfu_2923	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Tfu_2932	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Tfu_2953	PWY-6899	base-degraded thiamin salvage
Tfu_2953	PWY-7356	thiamin salvage IV (yeast)
Tfu_2971	PWY-5482	pyruvate fermentation to acetate II
Tfu_2971	PWY-5485	pyruvate fermentation to acetate IV
Tfu_2971	PWY-5497	purine nucleobases degradation II (anaerobic)
Tfu_2979	PWY-5941	glycogen degradation II (eukaryotic)
Tfu_2979	PWY-6724	starch degradation II
Tfu_2979	PWY-6737	starch degradation V
Tfu_2979	PWY-7238	sucrose biosynthesis II
Tfu_2995	PWY-4061	glutathione-mediated detoxification I
Tfu_2995	PWY-6842	glutathione-mediated detoxification II
Tfu_2995	PWY-7112	4-hydroxy-2-nonenal detoxification
Tfu_2995	PWY-7533	gliotoxin biosynthesis
Tfu_3001	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Tfu_3001	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Tfu_3001	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Tfu_3001	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Tfu_3001	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Tfu_3001	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Tfu_3001	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Tfu_3001	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Tfu_3002	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Tfu_3002	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Tfu_3002	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Tfu_3002	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Tfu_3002	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Tfu_3002	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Tfu_3002	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Tfu_3002	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Tfu_3008	PWY-5686	UMP biosynthesis
Tfu_3010	PWY-1042	glycolysis IV (plant cytosol)
Tfu_3010	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Tfu_3010	PWY-5484	glycolysis II (from fructose 6-phosphate)
Tfu_3010	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Tfu_3010	PWY-7385	1,3-propanediol biosynthesis (engineered)
Tfu_3012	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Tfu_3013	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Tfu_3013	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Tfu_3013	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Tfu_3014	PWY-6123	inosine-5'-phosphate biosynthesis I
Tfu_3014	PWY-6124	inosine-5'-phosphate biosynthesis II
Tfu_3014	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Tfu_3014	PWY-7234	inosine-5'-phosphate biosynthesis III
Tfu_3015	PWY-6123	inosine-5'-phosphate biosynthesis I
Tfu_3015	PWY-6124	inosine-5'-phosphate biosynthesis II
Tfu_3015	PWY-7234	inosine-5'-phosphate biosynthesis III
Tfu_3016	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Tfu_3016	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Tfu_3053	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Tfu_3099	PWY-2301	<i>myo</i>-inositol biosynthesis
Tfu_3099	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
Tfu_3099	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
Tfu_3099	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
Tfu_3099	PWY-6664	di-myo-inositol phosphate biosynthesis
