Thal_0025	PWY-6829	tRNA methylation (yeast)
Thal_0029	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Thal_0029	PWY-622	starch biosynthesis
Thal_0031	PWY-4983	L-citrulline-nitric oxide cycle
Thal_0031	PWY-4984	urea cycle
Thal_0031	PWY-5	canavanine biosynthesis
Thal_0031	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Thal_0031	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Thal_0049	PWY-5484	glycolysis II (from fructose 6-phosphate)
Thal_0052	PWY-2941	L-lysine biosynthesis II
Thal_0052	PWY-2942	L-lysine biosynthesis III
Thal_0052	PWY-5097	L-lysine biosynthesis VI
Thal_0067	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Thal_0092	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Thal_0110	PWY-6654	phosphopantothenate biosynthesis III
Thal_0118	PWY-5667	CDP-diacylglycerol biosynthesis I
Thal_0118	PWY-5981	CDP-diacylglycerol biosynthesis III
Thal_0120	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Thal_0130	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Thal_0130	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Thal_0130	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Thal_0133	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
Thal_0133	PWY-5739	GDP-D-perosamine biosynthesis
Thal_0133	PWY-5740	GDP-L-colitose biosynthesis
Thal_0133	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Thal_0157	PWY-6749	CMP-legionaminate biosynthesis I
Thal_0158	PWY-4981	L-proline biosynthesis II (from arginine)
Thal_0158	PWY-4984	urea cycle
Thal_0158	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Thal_0162	PWY-6938	NADH repair
Thal_0163	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Thal_0163	PWY-5686	UMP biosynthesis
Thal_0163	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Thal_0164	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Thal_0164	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Thal_0164	PWY-7185	UTP and CTP dephosphorylation I
Thal_0164	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Thal_0164	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Thal_0165	PWY-2781	<i>cis</i>-zeatin biosynthesis
Thal_0166	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Thal_0166	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Thal_0166	PWY-6897	thiamin salvage II
Thal_0166	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Thal_0166	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Thal_0166	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Thal_0166	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Thal_0180	PWY-3341	L-proline biosynthesis III
Thal_0180	PWY-4981	L-proline biosynthesis II (from arginine)
Thal_0180	PWY-6344	L-ornithine degradation II (Stickland reaction)
Thal_0182	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Thal_0185	PWY-5316	nicotine biosynthesis
Thal_0185	PWY-7342	superpathway of nicotine biosynthesis
Thal_0200	PWY-5392	reductive TCA cycle II
Thal_0200	PWY-5537	pyruvate fermentation to acetate V
Thal_0200	PWY-5538	pyruvate fermentation to acetate VI
Thal_0200	PWY-5690	TCA cycle II (plants and fungi)
Thal_0200	PWY-5913	TCA cycle VI (obligate autotrophs)
Thal_0200	PWY-6728	methylaspartate cycle
Thal_0200	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Thal_0200	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Thal_0201	PWY-5392	reductive TCA cycle II
Thal_0201	PWY-5537	pyruvate fermentation to acetate V
Thal_0201	PWY-5538	pyruvate fermentation to acetate VI
Thal_0201	PWY-5690	TCA cycle II (plants and fungi)
Thal_0201	PWY-5913	TCA cycle VI (obligate autotrophs)
Thal_0201	PWY-6728	methylaspartate cycle
Thal_0201	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Thal_0201	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Thal_0211	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Thal_0211	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Thal_0221	PWY-6599	guanine and guanosine salvage II
Thal_0221	PWY-6609	adenine and adenosine salvage III
Thal_0221	PWY-6610	adenine and adenosine salvage IV
Thal_0221	PWY-6620	guanine and guanosine salvage
Thal_0223	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
Thal_0229	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Thal_0229	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Thal_0235	PWY-6614	tetrahydrofolate biosynthesis
Thal_0239	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Thal_0242	PWY-6703	preQ<sub>0</sub> biosynthesis
Thal_0245	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Thal_0245	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Thal_0246	PWY-6012	acyl carrier protein metabolism I
Thal_0246	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Thal_0247	PWY-6910	hydroxymethylpyrimidine salvage
Thal_0247	PWY-7356	thiamin salvage IV (yeast)
Thal_0247	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Thal_0249	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Thal_0249	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Thal_0249	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Thal_0259	PWY-6823	molybdenum cofactor biosynthesis
Thal_0259	PWY-6891	thiazole biosynthesis II (Bacillus)
Thal_0259	PWY-6892	thiazole biosynthesis I (E. coli)
Thal_0259	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Thal_0265	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Thal_0265	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Thal_0271	PWY-2161	folate polyglutamylation
Thal_0275	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Thal_0275	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Thal_0277	PWY-5381	pyridine nucleotide cycling (plants)
Thal_0277	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Thal_0280	PWY-5269	cardiolipin biosynthesis II
Thal_0280	PWY-5668	cardiolipin biosynthesis I
Thal_0282	PWY-5663	tetrahydrobiopterin biosynthesis I
Thal_0282	PWY-5664	tetrahydrobiopterin biosynthesis II
Thal_0282	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Thal_0282	PWY-6703	preQ<sub>0</sub> biosynthesis
Thal_0282	PWY-6983	tetrahydrobiopterin biosynthesis III
Thal_0282	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Thal_0286	PWY-6167	flavin biosynthesis II (archaea)
Thal_0286	PWY-6168	flavin biosynthesis III (fungi)
Thal_0286	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Thal_0289	PWY-3781	aerobic respiration I (cytochrome c)
Thal_0289	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Thal_0289	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Thal_0289	PWY-5690	TCA cycle II (plants and fungi)
Thal_0289	PWY-6728	methylaspartate cycle
Thal_0289	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Thal_0289	PWY-7254	TCA cycle VII (acetate-producers)
Thal_0289	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Thal_0305	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Thal_0312	PWY-7560	methylerythritol phosphate pathway II
Thal_0322	PWY-5316	nicotine biosynthesis
Thal_0322	PWY-7342	superpathway of nicotine biosynthesis
Thal_0323	PWY-7560	methylerythritol phosphate pathway II
Thal_0326	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Thal_0326	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Thal_0326	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Thal_0331	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Thal_0333	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Thal_0342	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Thal_0342	PWY-2201	folate transformations I
Thal_0342	PWY-3841	folate transformations II
Thal_0342	PWY-5030	L-histidine degradation III
Thal_0342	PWY-5497	purine nucleobases degradation II (anaerobic)
Thal_0342	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Thal_0345	PWY-4381	fatty acid biosynthesis initiation I
Thal_0345	PWY-5743	3-hydroxypropanoate cycle
Thal_0345	PWY-5744	glyoxylate assimilation
Thal_0345	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Thal_0345	PWY-6679	jadomycin biosynthesis
Thal_0345	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Thal_0353	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Thal_0354	PWY-2941	L-lysine biosynthesis II
Thal_0354	PWY-2942	L-lysine biosynthesis III
Thal_0354	PWY-5097	L-lysine biosynthesis VI
Thal_0354	PWY-6559	spermidine biosynthesis II
Thal_0354	PWY-6562	norspermidine biosynthesis
Thal_0354	PWY-7153	grixazone biosynthesis
Thal_0362	PWY-7560	methylerythritol phosphate pathway II
Thal_0368	PWY-3781	aerobic respiration I (cytochrome c)
Thal_0368	PWY-6692	Fe(II) oxidation
Thal_0368	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
Thal_0368	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Thal_0374	PWY-5964	guanylyl molybdenum cofactor biosynthesis
Thal_0380	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Thal_0380	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Thal_0381	PWY-6749	CMP-legionaminate biosynthesis I
Thal_0387	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Thal_0387	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Thal_0388	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Thal_0388	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Thal_0389	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Thal_0389	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Thal_0391	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Thal_0391	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Thal_0406	PWY-6823	molybdenum cofactor biosynthesis
Thal_0407	PWY-6823	molybdenum cofactor biosynthesis
Thal_0413	PWY-6823	molybdenum cofactor biosynthesis
Thal_0418	PWY-6871	3-methylbutanol biosynthesis
Thal_0435	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Thal_0435	PWY-7177	UTP and CTP dephosphorylation II
Thal_0435	PWY-7185	UTP and CTP dephosphorylation I
Thal_0446	PWY-1622	formaldehyde assimilation I (serine pathway)
Thal_0446	PWY-181	photorespiration
Thal_0446	PWY-2161	folate polyglutamylation
Thal_0446	PWY-2201	folate transformations I
Thal_0446	PWY-3661	glycine betaine degradation I
Thal_0446	PWY-3661-1	glycine betaine degradation II (mammalian)
Thal_0446	PWY-3841	folate transformations II
Thal_0446	PWY-5497	purine nucleobases degradation II (anaerobic)
Thal_0452	PWY-7205	CMP phosphorylation
Thal_0453	PWY-5958	acridone alkaloid biosynthesis
Thal_0453	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Thal_0453	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Thal_0457	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
Thal_0457	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Thal_0458	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Thal_0462	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
Thal_0465	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Thal_0469	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Thal_0472	PWY-5057	L-valine degradation II
Thal_0472	PWY-5076	L-leucine degradation III
Thal_0472	PWY-5078	L-isoleucine degradation II
Thal_0472	PWY-5101	L-isoleucine biosynthesis II
Thal_0472	PWY-5103	L-isoleucine biosynthesis III
Thal_0472	PWY-5104	L-isoleucine biosynthesis IV
Thal_0472	PWY-5108	L-isoleucine biosynthesis V
Thal_0477	PWY-3801	sucrose degradation II (sucrose synthase)
Thal_0477	PWY-6527	stachyose degradation
Thal_0477	PWY-6981	chitin biosynthesis
Thal_0477	PWY-7238	sucrose biosynthesis II
Thal_0477	PWY-7343	UDP-glucose biosynthesis
Thal_0487	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Thal_0487	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Thal_0515	PWY-723	alkylnitronates degradation
Thal_0516	PWY-6123	inosine-5'-phosphate biosynthesis I
Thal_0516	PWY-6124	inosine-5'-phosphate biosynthesis II
Thal_0516	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Thal_0516	PWY-7234	inosine-5'-phosphate biosynthesis III
Thal_0519	PWY-5381	pyridine nucleotide cycling (plants)
Thal_0519	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Thal_0522	PWY-5269	cardiolipin biosynthesis II
Thal_0522	PWY-5668	cardiolipin biosynthesis I
Thal_0525	PWY-2201	folate transformations I
Thal_0525	PWY-3841	folate transformations II
Thal_0538	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Thal_0538	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Thal_0538	PWY-5989	stearate biosynthesis II (bacteria and plants)
Thal_0538	PWY-6113	superpathway of mycolate biosynthesis
Thal_0538	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Thal_0538	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Thal_0538	PWY-7096	triclosan resistance
Thal_0538	PWYG-321	mycolate biosynthesis
Thal_0539	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
Thal_0541	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Thal_0542	PWY-4983	L-citrulline-nitric oxide cycle
Thal_0542	PWY-4984	urea cycle
Thal_0542	PWY-5	canavanine biosynthesis
Thal_0542	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Thal_0542	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Thal_0543	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Thal_0543	PWY-6416	quinate degradation II
Thal_0543	PWY-6707	gallate biosynthesis
Thal_0544	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Thal_0544	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Thal_0545	PWY-6829	tRNA methylation (yeast)
Thal_0550	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Thal_0557	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Thal_0557	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Thal_0557	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Thal_0557	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Thal_0557	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Thal_0557	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Thal_0557	PWY-7205	CMP phosphorylation
Thal_0557	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Thal_0557	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Thal_0557	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Thal_0557	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Thal_0557	PWY-7224	purine deoxyribonucleosides salvage
Thal_0557	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Thal_0557	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Thal_0565	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
Thal_0565	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
Thal_0575	PWY-1042	glycolysis IV (plant cytosol)
Thal_0575	PWY-1622	formaldehyde assimilation I (serine pathway)
Thal_0575	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Thal_0575	PWY-5484	glycolysis II (from fructose 6-phosphate)
Thal_0575	PWY-5723	Rubisco shunt
Thal_0575	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Thal_0575	PWY-6886	1-butanol autotrophic biosynthesis
Thal_0575	PWY-6901	superpathway of glucose and xylose degradation
Thal_0575	PWY-7003	glycerol degradation to butanol
Thal_0575	PWY-7124	ethylene biosynthesis V (engineered)
Thal_0575	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Thal_0592	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Thal_0607	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Thal_0607	PWY-5723	Rubisco shunt
Thal_0634	PWY-1042	glycolysis IV (plant cytosol)
Thal_0634	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Thal_0634	PWY-5484	glycolysis II (from fructose 6-phosphate)
Thal_0634	PWY-5723	Rubisco shunt
Thal_0634	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Thal_0634	PWY-6886	1-butanol autotrophic biosynthesis
Thal_0634	PWY-6901	superpathway of glucose and xylose degradation
Thal_0634	PWY-7003	glycerol degradation to butanol
Thal_0634	PWY-7124	ethylene biosynthesis V (engineered)
Thal_0634	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Thal_0638	PWY-6167	flavin biosynthesis II (archaea)
Thal_0638	PWY-6168	flavin biosynthesis III (fungi)
Thal_0638	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Thal_0644	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Thal_0644	PWY-6167	flavin biosynthesis II (archaea)
Thal_0644	PWY-6168	flavin biosynthesis III (fungi)
Thal_0648	PWY-5367	petroselinate biosynthesis
Thal_0648	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Thal_0648	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Thal_0648	PWY-5989	stearate biosynthesis II (bacteria and plants)
Thal_0648	PWY-5994	palmitate biosynthesis I (animals and fungi)
Thal_0648	PWY-6113	superpathway of mycolate biosynthesis
Thal_0648	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Thal_0648	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Thal_0648	PWY-6951	Thal_0648
Thal_0648	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Thal_0648	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Thal_0648	PWYG-321	mycolate biosynthesis
Thal_0649	PWY-6700	queuosine biosynthesis
Thal_0673	PWY-5381	pyridine nucleotide cycling (plants)
Thal_0674	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Thal_0674	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Thal_0679	PWY-6834	spermidine biosynthesis III
Thal_0684	PWY-1622	formaldehyde assimilation I (serine pathway)
Thal_0684	PWY-5392	reductive TCA cycle II
Thal_0684	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Thal_0684	PWY-5690	TCA cycle II (plants and fungi)
Thal_0684	PWY-5913	TCA cycle VI (obligate autotrophs)
Thal_0684	PWY-6728	methylaspartate cycle
Thal_0684	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Thal_0684	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Thal_0684	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Thal_0687	PWY-5155	&beta;-alanine biosynthesis III
Thal_0688	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Thal_0688	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Thal_0688	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Thal_0688	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Thal_0688	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Thal_0688	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Thal_0688	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Thal_0688	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Thal_0689	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Thal_0689	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Thal_0689	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Thal_0689	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Thal_0689	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Thal_0689	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Thal_0689	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Thal_0689	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Thal_0695	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Thal_0695	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Thal_0707	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Thal_0707	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Thal_0709	PWY-5704	urea degradation II
Thal_0710	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Thal_0710	PWY-5723	Rubisco shunt
Thal_0715	PWY-5704	urea degradation II
Thal_0721	PWY-5704	urea degradation II
Thal_0722	PWY-5704	urea degradation II
Thal_0749	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Thal_0761	PWY-5198	factor 420 biosynthesis
Thal_0761	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
Thal_0761	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
Thal_0772	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Thal_0772	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Thal_0772	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Thal_0772	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Thal_0782	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Thal_0782	PWY-7118	chitin degradation to ethanol
Thal_0785	PWY-5988	wound-induced proteolysis I
Thal_0785	PWY-6018	seed germination protein turnover
Thal_0802	PWY-6703	preQ<sub>0</sub> biosynthesis
Thal_0812	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Thal_0812	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Thal_0819	PWY-622	starch biosynthesis
Thal_0824	PWY-1042	glycolysis IV (plant cytosol)
Thal_0824	PWY-5484	glycolysis II (from fructose 6-phosphate)
Thal_0824	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Thal_0824	PWY-7003	glycerol degradation to butanol
Thal_0829	PWY-2941	L-lysine biosynthesis II
Thal_0829	PWY-2942	L-lysine biosynthesis III
Thal_0829	PWY-5097	L-lysine biosynthesis VI
Thal_0830	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Thal_0831	PWY-6936	seleno-amino acid biosynthesis
Thal_0842	PWY-6823	molybdenum cofactor biosynthesis
Thal_0848	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Thal_0850	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Thal_0850	PWY-5686	UMP biosynthesis
Thal_0850	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Thal_0852	PWY-6891	thiazole biosynthesis II (Bacillus)
Thal_0852	PWY-6892	thiazole biosynthesis I (E. coli)
Thal_0852	PWY-7560	methylerythritol phosphate pathway II
Thal_0853	PWY-5659	GDP-mannose biosynthesis
Thal_0853	PWY-6073	alginate biosynthesis I (algal)
Thal_0853	PWY-6082	alginate biosynthesis II (bacterial)
Thal_0853	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Thal_0861	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Thal_0861	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Thal_0867	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Thal_0867	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Thal_0867	PWY-6896	thiamin salvage I
Thal_0867	PWY-6897	thiamin salvage II
Thal_0870	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Thal_0870	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Thal_0870	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Thal_0873	PWY-6703	preQ<sub>0</sub> biosynthesis
Thal_0880	PWY-6832	2-aminoethylphosphonate degradation II
Thal_0886	PWY-5958	acridone alkaloid biosynthesis
Thal_0886	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Thal_0886	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Thal_0890	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Thal_0891	PWY-702	L-methionine biosynthesis II
Thal_0892	PWY-3961	phosphopantothenate biosynthesis II
Thal_0893	PWY-5198	factor 420 biosynthesis
Thal_0895	PWY-6167	flavin biosynthesis II (archaea)
Thal_0895	PWY-6168	flavin biosynthesis III (fungi)
Thal_0897	PWY-5101	L-isoleucine biosynthesis II
Thal_0897	PWY-5103	L-isoleucine biosynthesis III
Thal_0897	PWY-5104	L-isoleucine biosynthesis IV
Thal_0897	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Thal_0901	PWY-4381	fatty acid biosynthesis initiation I
Thal_0908	PWY-7560	methylerythritol phosphate pathway II
Thal_0917	PWY-3801	sucrose degradation II (sucrose synthase)
Thal_0917	PWY-3861	mannitol degradation II
Thal_0917	PWY-3881	mannitol biosynthesis
Thal_0917	PWY-5054	sorbitol biosynthesis I
Thal_0917	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Thal_0917	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Thal_0917	PWY-5659	GDP-mannose biosynthesis
Thal_0917	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Thal_0917	PWY-621	sucrose degradation III (sucrose invertase)
Thal_0917	PWY-622	starch biosynthesis
Thal_0917	PWY-6531	mannitol cycle
Thal_0917	PWY-6981	chitin biosynthesis
Thal_0917	PWY-7238	sucrose biosynthesis II
Thal_0917	PWY-7347	sucrose biosynthesis III
Thal_0917	PWY-7385	1,3-propanediol biosynthesis (engineered)
Thal_0917	PWY-7456	mannan degradation
Thal_0917	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Thal_0920	PWY-1042	glycolysis IV (plant cytosol)
Thal_0920	PWY-5484	glycolysis II (from fructose 6-phosphate)
Thal_0920	PWY-6901	superpathway of glucose and xylose degradation
Thal_0920	PWY-7003	glycerol degradation to butanol
Thal_0925	PWY-6123	inosine-5'-phosphate biosynthesis I
Thal_0925	PWY-7234	inosine-5'-phosphate biosynthesis III
Thal_0926	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Thal_0927	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Thal_0927	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Thal_0929	PWY-3461	L-tyrosine biosynthesis II
Thal_0929	PWY-3462	L-phenylalanine biosynthesis II
Thal_0929	PWY-6120	L-tyrosine biosynthesis III
Thal_0929	PWY-6627	salinosporamide A biosynthesis
Thal_0929	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Thal_0953	PWY-5101	L-isoleucine biosynthesis II
Thal_0953	PWY-5103	L-isoleucine biosynthesis III
Thal_0953	PWY-5104	L-isoleucine biosynthesis IV
Thal_0953	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Thal_0953	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Thal_0953	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Thal_0953	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Thal_0954	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Thal_0954	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Thal_0954	PWY-6897	thiamin salvage II
Thal_0954	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Thal_0954	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Thal_0954	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Thal_0954	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Thal_0963	PWY-6854	ethylene biosynthesis III (microbes)
Thal_0975	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Thal_0981	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Thal_0981	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Thal_0981	PWY-5989	stearate biosynthesis II (bacteria and plants)
Thal_0981	PWY-5994	palmitate biosynthesis I (animals and fungi)
Thal_0981	PWY-6113	superpathway of mycolate biosynthesis
Thal_0981	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Thal_0981	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Thal_0981	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Thal_0981	PWYG-321	mycolate biosynthesis
Thal_0990	PWY-5101	L-isoleucine biosynthesis II
Thal_0990	PWY-6871	3-methylbutanol biosynthesis
Thal_0991	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Thal_0991	PWY-5723	Rubisco shunt
Thal_0996	PWY-3821	galactose degradation III
Thal_0996	PWY-6317	galactose degradation I (Leloir pathway)
Thal_0996	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Thal_0996	PWY-6527	stachyose degradation
Thal_0996	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Thal_0996	PWY-7344	UDP-D-galactose biosynthesis
Thal_0997	PWY-3821	galactose degradation III
Thal_0997	PWY-6317	galactose degradation I (Leloir pathway)
Thal_0997	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Thal_0997	PWY-6527	stachyose degradation
Thal_0997	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Thal_0997	PWY-7344	UDP-D-galactose biosynthesis
Thal_1004	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Thal_1004	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Thal_1007	PWY-2941	L-lysine biosynthesis II
Thal_1007	PWY-2942	L-lysine biosynthesis III
Thal_1007	PWY-5097	L-lysine biosynthesis VI
Thal_1009	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Thal_1010	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Thal_1010	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Thal_1010	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Thal_1013	PWY-7560	methylerythritol phosphate pathway II
Thal_1024	PWY-5686	UMP biosynthesis
Thal_1025	PWY-6871	3-methylbutanol biosynthesis
Thal_1061	PWY-1042	glycolysis IV (plant cytosol)
Thal_1061	PWY-5484	glycolysis II (from fructose 6-phosphate)
Thal_1061	PWY-6886	1-butanol autotrophic biosynthesis
Thal_1061	PWY-6901	superpathway of glucose and xylose degradation
Thal_1061	PWY-7003	glycerol degradation to butanol
Thal_1062	PWY-2301	<i>myo</i>-inositol biosynthesis
Thal_1062	PWY-4702	phytate degradation I
Thal_1062	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Thal_1070	PWY-6700	queuosine biosynthesis
Thal_1071	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Thal_1071	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Thal_1071	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Thal_1074	PWY-4381	fatty acid biosynthesis initiation I
Thal_1074	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Thal_1074	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Thal_1076	PWY-101	photosynthesis light reactions
Thal_1076	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Thal_1097	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Thal_1097	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Thal_1111	PWY-6683	sulfate reduction III (assimilatory)
Thal_1114	PWY-5194	siroheme biosynthesis
Thal_1114	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Thal_1115	PWY-5278	sulfite oxidation III
Thal_1115	PWY-5340	sulfate activation for sulfonation
Thal_1115	PWY-6683	sulfate reduction III (assimilatory)
Thal_1115	PWY-6932	selenate reduction
Thal_1122	PWY-5686	UMP biosynthesis
Thal_1135	PWY-7158	L-phenylalanine degradation V
Thal_1137	PWY-5350	thiosulfate disproportionation III (rhodanese)
Thal_1156	PWY-5392	reductive TCA cycle II
Thal_1156	PWY-5537	pyruvate fermentation to acetate V
Thal_1156	PWY-5538	pyruvate fermentation to acetate VI
Thal_1156	PWY-5690	TCA cycle II (plants and fungi)
Thal_1156	PWY-5913	TCA cycle VI (obligate autotrophs)
Thal_1156	PWY-6728	methylaspartate cycle
Thal_1156	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Thal_1156	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Thal_1165	PWY-3781	aerobic respiration I (cytochrome c)
Thal_1165	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Thal_1165	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Thal_1165	PWY-5690	TCA cycle II (plants and fungi)
Thal_1165	PWY-6728	methylaspartate cycle
Thal_1165	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Thal_1165	PWY-7254	TCA cycle VII (acetate-producers)
Thal_1165	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Thal_1175	PWY-5316	nicotine biosynthesis
Thal_1175	PWY-5381	pyridine nucleotide cycling (plants)
Thal_1175	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Thal_1175	PWY-7342	superpathway of nicotine biosynthesis
Thal_1190	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Thal_1190	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Thal_1192	PWY-6854	ethylene biosynthesis III (microbes)
Thal_1197	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Thal_1203	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Thal_1203	PWY-6596	adenosine nucleotides degradation I
Thal_1203	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Thal_1204	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Thal_1204	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Thal_1204	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Thal_1204	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Thal_1224	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Thal_1224	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Thal_1224	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Thal_1224	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Thal_1224	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Thal_1224	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Thal_1229	PWY-6123	inosine-5'-phosphate biosynthesis I
Thal_1229	PWY-6124	inosine-5'-phosphate biosynthesis II
Thal_1229	PWY-7234	inosine-5'-phosphate biosynthesis III
Thal_1230	PWY-5941	glycogen degradation II (eukaryotic)
Thal_1230	PWY-622	starch biosynthesis
Thal_1230	PWY-6731	starch degradation III
Thal_1230	PWY-6737	starch degradation V
Thal_1230	PWY-7238	sucrose biosynthesis II
Thal_1232	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
Thal_1233	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Thal_1233	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Thal_1233	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Thal_1242	PWY-5941	glycogen degradation II (eukaryotic)
Thal_1242	PWY-6724	starch degradation II
Thal_1242	PWY-6737	starch degradation V
Thal_1242	PWY-7238	sucrose biosynthesis II
Thal_1243	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Thal_1252	PWY-6700	queuosine biosynthesis
Thal_1264	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Thal_1266	PWY-6167	flavin biosynthesis II (archaea)
Thal_1266	PWY-6168	flavin biosynthesis III (fungi)
Thal_1271	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Thal_1271	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Thal_1281	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Thal_1281	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Thal_1282	PWY-6891	thiazole biosynthesis II (Bacillus)
Thal_1282	PWY-6892	thiazole biosynthesis I (E. coli)
Thal_1287	PWY-2941	L-lysine biosynthesis II
Thal_1287	PWY-5097	L-lysine biosynthesis VI
Thal_1291	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Thal_1312	PWY-381	nitrate reduction II (assimilatory)
Thal_1312	PWY-5675	nitrate reduction V (assimilatory)
Thal_1312	PWY-6549	L-glutamine biosynthesis III
Thal_1312	PWY-6963	ammonia assimilation cycle I
Thal_1312	PWY-6964	ammonia assimilation cycle II
Thal_1316	PWY-5194	siroheme biosynthesis
Thal_1316	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Thal_1317	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Thal_1317	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Thal_1326	PWY-6683	sulfate reduction III (assimilatory)
Thal_1332	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Thal_1332	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Thal_1359	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Thal_1362	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Thal_1362	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Thal_1382	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Thal_1382	PWY-5723	Rubisco shunt
Thal_1382	PWY-6891	thiazole biosynthesis II (Bacillus)
Thal_1382	PWY-6892	thiazole biosynthesis I (E. coli)
Thal_1382	PWY-6901	superpathway of glucose and xylose degradation
Thal_1382	PWY-7560	methylerythritol phosphate pathway II
Thal_1383	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Thal_1387	PWY-5101	L-isoleucine biosynthesis II
Thal_1387	PWY-5103	L-isoleucine biosynthesis III
Thal_1387	PWY-5104	L-isoleucine biosynthesis IV
Thal_1387	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Thal_1402	PWY-3781	aerobic respiration I (cytochrome c)
Thal_1402	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Thal_1402	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Thal_1402	PWY-5690	TCA cycle II (plants and fungi)
Thal_1402	PWY-6728	methylaspartate cycle
Thal_1402	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Thal_1402	PWY-7254	TCA cycle VII (acetate-producers)
Thal_1402	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Thal_1444	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Thal_1444	PWY-6148	tetrahydromethanopterin biosynthesis
Thal_1444	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Thal_1444	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Thal_1461	PWY-5392	reductive TCA cycle II
Thal_1461	PWY-5537	pyruvate fermentation to acetate V
Thal_1461	PWY-5538	pyruvate fermentation to acetate VI
Thal_1461	PWY-5690	TCA cycle II (plants and fungi)
Thal_1461	PWY-5913	TCA cycle VI (obligate autotrophs)
Thal_1461	PWY-6728	methylaspartate cycle
Thal_1461	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Thal_1461	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Thal_1463	PWY-3221	dTDP-L-rhamnose biosynthesis II
Thal_1463	PWY-6808	dTDP-D-forosamine biosynthesis
Thal_1463	PWY-6942	dTDP-D-desosamine biosynthesis
Thal_1463	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Thal_1463	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Thal_1463	PWY-6974	dTDP-L-olivose biosynthesis
Thal_1463	PWY-6976	dTDP-L-mycarose biosynthesis
Thal_1463	PWY-7104	dTDP-L-megosamine biosynthesis
Thal_1463	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Thal_1463	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Thal_1463	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Thal_1463	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Thal_1463	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Thal_1463	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Thal_1463	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Thal_1463	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Thal_1465	PWY-3221	dTDP-L-rhamnose biosynthesis II
Thal_1465	PWY-6808	dTDP-D-forosamine biosynthesis
Thal_1465	PWY-6942	dTDP-D-desosamine biosynthesis
Thal_1465	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Thal_1465	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Thal_1465	PWY-6974	dTDP-L-olivose biosynthesis
Thal_1465	PWY-6976	dTDP-L-mycarose biosynthesis
Thal_1465	PWY-7104	dTDP-L-megosamine biosynthesis
Thal_1465	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Thal_1465	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Thal_1465	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Thal_1465	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Thal_1465	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Thal_1465	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Thal_1465	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Thal_1465	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Thal_1468	PWY-5686	UMP biosynthesis
Thal_1471	PWY-2301	<i>myo</i>-inositol biosynthesis
Thal_1471	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
Thal_1471	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
Thal_1471	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
Thal_1471	PWY-6664	di-myo-inositol phosphate biosynthesis
Thal_1474	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Thal_1474	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Thal_1474	PWY-6936	seleno-amino acid biosynthesis
Thal_1474	PWY-702	L-methionine biosynthesis II
Thal_1476	PWY-5686	UMP biosynthesis
Thal_1480	PWY-3781	aerobic respiration I (cytochrome c)
Thal_1480	PWY-4521	arsenite oxidation I (respiratory)
Thal_1480	PWY-6692	Fe(II) oxidation
Thal_1480	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Thal_1481	PWY-5381	pyridine nucleotide cycling (plants)
Thal_1481	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Thal_1481	PWY-6596	adenosine nucleotides degradation I
Thal_1481	PWY-6606	guanosine nucleotides degradation II
Thal_1481	PWY-6607	guanosine nucleotides degradation I
Thal_1481	PWY-6608	guanosine nucleotides degradation III
Thal_1481	PWY-7185	UTP and CTP dephosphorylation I
Thal_1507	PWY-3781	aerobic respiration I (cytochrome c)
Thal_1507	PWY-4521	arsenite oxidation I (respiratory)
Thal_1507	PWY-6692	Fe(II) oxidation
Thal_1507	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Thal_1510	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Thal_1510	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Thal_1511	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Thal_1511	PWY-5686	UMP biosynthesis
Thal_1511	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Thal_1513	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Thal_1516	PWY-2941	L-lysine biosynthesis II
Thal_1516	PWY-2942	L-lysine biosynthesis III
Thal_1516	PWY-5097	L-lysine biosynthesis VI
Thal_1516	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Thal_1516	PWY-6559	spermidine biosynthesis II
Thal_1516	PWY-6562	norspermidine biosynthesis
Thal_1516	PWY-7153	grixazone biosynthesis
Thal_1516	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Thal_1518	PWY-5097	L-lysine biosynthesis VI
Thal_1525	PWY-4381	fatty acid biosynthesis initiation I
Thal_1525	PWY-5743	3-hydroxypropanoate cycle
Thal_1525	PWY-5744	glyoxylate assimilation
Thal_1525	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Thal_1525	PWY-6679	jadomycin biosynthesis
Thal_1525	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Thal_1536	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Thal_1538	PWY-6578	8-amino-7-oxononanoate biosynthesis III
Thal_1552	PWY-5958	acridone alkaloid biosynthesis
Thal_1552	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Thal_1552	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Thal_1554	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Thal_1554	PWY-6578	8-amino-7-oxononanoate biosynthesis III
Thal_1554	PWY-7147	8-amino-7-oxononanoate biosynthesis II
Thal_1555	PWY-5194	siroheme biosynthesis
Thal_1555	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Thal_1562	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Thal_1562	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Thal_1562	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Thal_1562	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Thal_1563	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Thal_1563	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Thal_1568	PWY-3781	aerobic respiration I (cytochrome c)
Thal_1568	PWY-4521	arsenite oxidation I (respiratory)
Thal_1568	PWY-6692	Fe(II) oxidation
Thal_1568	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Thal_1574	PWY-3781	aerobic respiration I (cytochrome c)
Thal_1574	PWY-4521	arsenite oxidation I (respiratory)
Thal_1574	PWY-6692	Fe(II) oxidation
Thal_1574	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Thal_1578	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Thal_1578	PWY-6855	chitin degradation I (archaea)
Thal_1578	PWY-6906	chitin derivatives degradation
Thal_1579	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Thal_1582	PWY-6123	inosine-5'-phosphate biosynthesis I
Thal_1582	PWY-6124	inosine-5'-phosphate biosynthesis II
Thal_1582	PWY-7234	inosine-5'-phosphate biosynthesis III
Thal_1583	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Thal_1583	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Thal_1583	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Thal_1584	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Thal_1584	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Thal_1584	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Thal_1586	PWY-5101	L-isoleucine biosynthesis II
Thal_1586	PWY-5103	L-isoleucine biosynthesis III
Thal_1586	PWY-5104	L-isoleucine biosynthesis IV
Thal_1586	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Thal_1586	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Thal_1586	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Thal_1586	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Thal_1600	PWY-6829	tRNA methylation (yeast)
Thal_1600	PWY-7285	methylwyosine biosynthesis
Thal_1600	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
