Thein_0002	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Thein_0002	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Thein_0006	PWY-5101	L-isoleucine biosynthesis II
Thein_0006	PWY-5103	L-isoleucine biosynthesis III
Thein_0006	PWY-5104	L-isoleucine biosynthesis IV
Thein_0006	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Thein_0013	PWY-6317	galactose degradation I (Leloir pathway)
Thein_0013	PWY-6527	stachyose degradation
Thein_0017	PWY-4202	arsenate detoxification I (glutaredoxin)
Thein_0017	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Thein_0017	PWY-6608	guanosine nucleotides degradation III
Thein_0017	PWY-6609	adenine and adenosine salvage III
Thein_0017	PWY-6611	adenine and adenosine salvage V
Thein_0017	PWY-6620	guanine and guanosine salvage
Thein_0017	PWY-6627	salinosporamide A biosynthesis
Thein_0017	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Thein_0017	PWY-7179	purine deoxyribonucleosides degradation I
Thein_0017	PWY-7179-1	purine deoxyribonucleosides degradation
Thein_0019	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Thein_0019	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Thein_0019	PWY-6936	seleno-amino acid biosynthesis
Thein_0019	PWY-702	L-methionine biosynthesis II
Thein_0024	PWY-5484	glycolysis II (from fructose 6-phosphate)
Thein_0031	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Thein_0033	PWY-5663	tetrahydrobiopterin biosynthesis I
Thein_0033	PWY-5664	tetrahydrobiopterin biosynthesis II
Thein_0033	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Thein_0033	PWY-6703	preQ<sub>0</sub> biosynthesis
Thein_0033	PWY-6983	tetrahydrobiopterin biosynthesis III
Thein_0033	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Thein_0042	PWY-5839	menaquinol-7 biosynthesis
Thein_0042	PWY-5844	menaquinol-9 biosynthesis
Thein_0042	PWY-5849	menaquinol-6 biosynthesis
Thein_0042	PWY-5890	menaquinol-10 biosynthesis
Thein_0042	PWY-5891	menaquinol-11 biosynthesis
Thein_0042	PWY-5892	menaquinol-12 biosynthesis
Thein_0042	PWY-5895	menaquinol-13 biosynthesis
Thein_0049	PWY-3801	sucrose degradation II (sucrose synthase)
Thein_0049	PWY-5054	sorbitol biosynthesis I
Thein_0049	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Thein_0049	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Thein_0049	PWY-5659	GDP-mannose biosynthesis
Thein_0049	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Thein_0049	PWY-621	sucrose degradation III (sucrose invertase)
Thein_0049	PWY-622	starch biosynthesis
Thein_0049	PWY-6531	mannitol cycle
Thein_0049	PWY-6981	chitin biosynthesis
Thein_0049	PWY-7238	sucrose biosynthesis II
Thein_0049	PWY-7347	sucrose biosynthesis III
Thein_0049	PWY-7385	1,3-propanediol biosynthesis (engineered)
Thein_0060	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Thein_0065	PWY-5491	diethylphosphate degradation
Thein_0070	PWY-6123	inosine-5'-phosphate biosynthesis I
Thein_0070	PWY-6124	inosine-5'-phosphate biosynthesis II
Thein_0070	PWY-7234	inosine-5'-phosphate biosynthesis III
Thein_0074	PWY-6749	CMP-legionaminate biosynthesis I
Thein_0077	PWY-6614	tetrahydrofolate biosynthesis
Thein_0085	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Thein_0091	PWY-2723	trehalose degradation V
Thein_0091	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Thein_0091	PWY-5661	GDP-glucose biosynthesis
Thein_0091	PWY-7238	sucrose biosynthesis II
Thein_0091	PWY-7385	1,3-propanediol biosynthesis (engineered)
Thein_0114	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Thein_0121	PWY-6683	sulfate reduction III (assimilatory)
Thein_0124	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Thein_0124	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Thein_0124	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Thein_0129	PWY-4381	fatty acid biosynthesis initiation I
Thein_0129	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Thein_0129	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Thein_0131	PWY-6823	molybdenum cofactor biosynthesis
Thein_0148	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Thein_0148	PWY-6596	adenosine nucleotides degradation I
Thein_0148	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Thein_0153	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Thein_0153	PWY-7118	chitin degradation to ethanol
Thein_0154	PWY-1341	phenylacetate degradation II (anaerobic)
Thein_0154	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Thein_0176	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Thein_0177	PWY-5194	siroheme biosynthesis
Thein_0177	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Thein_0200	PWY-1042	glycolysis IV (plant cytosol)
Thein_0200	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Thein_0200	PWY-5484	glycolysis II (from fructose 6-phosphate)
Thein_0200	PWY-5723	Rubisco shunt
Thein_0200	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Thein_0200	PWY-6886	1-butanol autotrophic biosynthesis
Thein_0200	PWY-6901	superpathway of glucose and xylose degradation
Thein_0200	PWY-7003	glycerol degradation to butanol
Thein_0200	PWY-7124	ethylene biosynthesis V (engineered)
Thein_0200	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Thein_0201	PWY-5316	nicotine biosynthesis
Thein_0201	PWY-7342	superpathway of nicotine biosynthesis
Thein_0239	PWY-5674	nitrate reduction IV (dissimilatory)
Thein_0254	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Thein_0257	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Thein_0257	PWY-5686	UMP biosynthesis
Thein_0257	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Thein_0261	PWY-5667	CDP-diacylglycerol biosynthesis I
Thein_0261	PWY-5981	CDP-diacylglycerol biosynthesis III
Thein_0261	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
Thein_0261	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
Thein_0262	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Thein_0262	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Thein_0264	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Thein_0265	PWY-7560	methylerythritol phosphate pathway II
Thein_0297	PWY-5155	&beta;-alanine biosynthesis III
Thein_0302	PWY-5101	L-isoleucine biosynthesis II
Thein_0302	PWY-6871	3-methylbutanol biosynthesis
Thein_0303	PWY-2941	L-lysine biosynthesis II
Thein_0303	PWY-2942	L-lysine biosynthesis III
Thein_0303	PWY-5097	L-lysine biosynthesis VI
Thein_0303	PWY-6559	spermidine biosynthesis II
Thein_0303	PWY-6562	norspermidine biosynthesis
Thein_0303	PWY-7153	grixazone biosynthesis
Thein_0306	PWY-6683	sulfate reduction III (assimilatory)
Thein_0314	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Thein_0314	PWY-5723	Rubisco shunt
Thein_0341	PWY-2781	<i>cis</i>-zeatin biosynthesis
Thein_0351	PWY-6012	acyl carrier protein metabolism I
Thein_0351	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Thein_0352	PWY-1281	sulfoacetaldehyde degradation I
Thein_0352	PWY-5482	pyruvate fermentation to acetate II
Thein_0352	PWY-5485	pyruvate fermentation to acetate IV
Thein_0352	PWY-5497	purine nucleobases degradation II (anaerobic)
Thein_0352	PWY-6637	sulfolactate degradation II
Thein_0353	PWY-5392	reductive TCA cycle II
Thein_0353	PWY-5537	pyruvate fermentation to acetate V
Thein_0353	PWY-5538	pyruvate fermentation to acetate VI
Thein_0353	PWY-5690	TCA cycle II (plants and fungi)
Thein_0353	PWY-5913	TCA cycle VI (obligate autotrophs)
Thein_0353	PWY-6728	methylaspartate cycle
Thein_0353	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Thein_0353	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Thein_0359	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Thein_0359	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Thein_0359	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Thein_0359	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Thein_0359	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Thein_0359	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Thein_0359	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Thein_0359	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Thein_0360	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Thein_0360	PWY-6416	quinate degradation II
Thein_0360	PWY-6707	gallate biosynthesis
Thein_0361	PWY-6123	inosine-5'-phosphate biosynthesis I
Thein_0361	PWY-6124	inosine-5'-phosphate biosynthesis II
Thein_0361	PWY-7234	inosine-5'-phosphate biosynthesis III
Thein_0374	PWY-723	alkylnitronates degradation
Thein_0375	PWY-5367	petroselinate biosynthesis
Thein_0375	PWY-5676	acetyl-CoA fermentation to butanoate II
Thein_0375	PWY-5741	ethylmalonyl-CoA pathway
Thein_0375	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Thein_0375	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Thein_0375	PWY-5989	stearate biosynthesis II (bacteria and plants)
Thein_0375	PWY-5994	palmitate biosynthesis I (animals and fungi)
Thein_0375	PWY-6113	superpathway of mycolate biosynthesis
Thein_0375	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Thein_0375	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Thein_0375	PWY-6951	Thein_0375
Thein_0375	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Thein_0375	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Thein_0375	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Thein_0375	PWYG-321	mycolate biosynthesis
Thein_0381	PWY-1622	formaldehyde assimilation I (serine pathway)
Thein_0381	PWY-181	photorespiration
Thein_0381	PWY-2161	folate polyglutamylation
Thein_0381	PWY-2201	folate transformations I
Thein_0381	PWY-3661	glycine betaine degradation I
Thein_0381	PWY-3661-1	glycine betaine degradation II (mammalian)
Thein_0381	PWY-3841	folate transformations II
Thein_0381	PWY-5497	purine nucleobases degradation II (anaerobic)
Thein_0386	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Thein_0386	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Thein_0389	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Thein_0389	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Thein_0389	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Thein_0389	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Thein_0393	PWY-5674	nitrate reduction IV (dissimilatory)
Thein_0394	PWY-5674	nitrate reduction IV (dissimilatory)
Thein_0397	PWY-6167	flavin biosynthesis II (archaea)
Thein_0397	PWY-6168	flavin biosynthesis III (fungi)
Thein_0397	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Thein_0404	PWY-6683	sulfate reduction III (assimilatory)
Thein_0405	PWY-6683	sulfate reduction III (assimilatory)
Thein_0432	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Thein_0432	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Thein_0433	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Thein_0433	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Thein_0434	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Thein_0434	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Thein_0434	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Thein_0434	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Thein_0435	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Thein_0435	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Thein_0436	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Thein_0436	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Thein_0436	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Thein_0437	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Thein_0437	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Thein_0445	PWY-6143	CMP-pseudaminate biosynthesis
Thein_0445	PWY-7330	UDP-<i>N</i>-acetyl-&beta;-L-fucosamine biosynthesis
Thein_0445	PWY-7331	UDP-<i>N</i>-acetyl-&beta;-L-quinovosamine biosynthesis
Thein_0445	PWY-7332	superpathway of UDP-<I>N</i>-acetylglucosamine-derived O-antigen building blocks biosynthesis
Thein_0447	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Thein_0447	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Thein_0448	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Thein_0448	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Thein_0448	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Thein_0448	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Thein_0449	PWY-6143	CMP-pseudaminate biosynthesis
Thein_0472	PWY-6123	inosine-5'-phosphate biosynthesis I
Thein_0472	PWY-7234	inosine-5'-phosphate biosynthesis III
Thein_0473	PWY-5686	UMP biosynthesis
Thein_0474	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Thein_0474	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Thein_0482	PWY-6891	thiazole biosynthesis II (Bacillus)
Thein_0482	PWY-6892	thiazole biosynthesis I (E. coli)
Thein_0482	PWY-7560	methylerythritol phosphate pathway II
Thein_0488	PWY-5381	pyridine nucleotide cycling (plants)
Thein_0491	PWY-5392	reductive TCA cycle II
Thein_0491	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Thein_0491	PWY-5690	TCA cycle II (plants and fungi)
Thein_0491	PWY-5913	TCA cycle VI (obligate autotrophs)
Thein_0491	PWY-6728	methylaspartate cycle
Thein_0491	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Thein_0491	PWY-7254	TCA cycle VII (acetate-producers)
Thein_0491	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Thein_0493	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Thein_0497	PWY-6759	hydrogen production III
Thein_0497	PWY-6785	hydrogen production VIII
Thein_0500	PWY-5198	factor 420 biosynthesis
Thein_0500	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Thein_0522	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Thein_0524	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Thein_0524	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Thein_0524	PWY-6897	thiamin salvage II
Thein_0524	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Thein_0524	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Thein_0524	PWY-6910	hydroxymethylpyrimidine salvage
Thein_0524	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Thein_0524	PWY-7356	thiamin salvage IV (yeast)
Thein_0524	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Thein_0536	PWY-5669	phosphatidylethanolamine biosynthesis I
Thein_0537	PWY-5669	phosphatidylethanolamine biosynthesis I
Thein_0538	PWY-6871	3-methylbutanol biosynthesis
Thein_0554	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Thein_0556	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Thein_0556	PWY-5723	Rubisco shunt
Thein_0557	PWY-4983	L-citrulline-nitric oxide cycle
Thein_0557	PWY-4984	urea cycle
Thein_0557	PWY-5	canavanine biosynthesis
Thein_0557	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Thein_0557	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Thein_0572	PWY-3961	phosphopantothenate biosynthesis II
Thein_0583	PWY-7560	methylerythritol phosphate pathway II
Thein_0588	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Thein_0588	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Thein_0598	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Thein_0598	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Thein_0620	PWY-6599	guanine and guanosine salvage II
Thein_0620	PWY-6609	adenine and adenosine salvage III
Thein_0620	PWY-6610	adenine and adenosine salvage IV
Thein_0620	PWY-6620	guanine and guanosine salvage
Thein_0637	PWY-6823	molybdenum cofactor biosynthesis
Thein_0647	PWY-6829	tRNA methylation (yeast)
Thein_0647	PWY-7285	methylwyosine biosynthesis
Thein_0647	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Thein_0658	PWY-6123	inosine-5'-phosphate biosynthesis I
Thein_0658	PWY-6124	inosine-5'-phosphate biosynthesis II
Thein_0658	PWY-7234	inosine-5'-phosphate biosynthesis III
Thein_0660	PWY-6834	spermidine biosynthesis III
Thein_0670	PWY-6936	seleno-amino acid biosynthesis
Thein_0700	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
Thein_0700	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
Thein_0726	PWY-3221	dTDP-L-rhamnose biosynthesis II
Thein_0726	PWY-6808	dTDP-D-forosamine biosynthesis
Thein_0726	PWY-6942	dTDP-D-desosamine biosynthesis
Thein_0726	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Thein_0726	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Thein_0726	PWY-6974	dTDP-L-olivose biosynthesis
Thein_0726	PWY-6976	dTDP-L-mycarose biosynthesis
Thein_0726	PWY-7104	dTDP-L-megosamine biosynthesis
Thein_0726	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Thein_0726	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Thein_0726	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Thein_0726	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Thein_0726	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Thein_0726	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Thein_0726	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Thein_0726	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Thein_0729	PWY-3221	dTDP-L-rhamnose biosynthesis II
Thein_0729	PWY-6808	dTDP-D-forosamine biosynthesis
Thein_0729	PWY-6942	dTDP-D-desosamine biosynthesis
Thein_0729	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Thein_0729	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Thein_0729	PWY-6974	dTDP-L-olivose biosynthesis
Thein_0729	PWY-6976	dTDP-L-mycarose biosynthesis
Thein_0729	PWY-7104	dTDP-L-megosamine biosynthesis
Thein_0729	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Thein_0729	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Thein_0729	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Thein_0729	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Thein_0729	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Thein_0729	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Thein_0729	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Thein_0729	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Thein_0736	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Thein_0736	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Thein_0736	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Thein_0736	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Thein_0736	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Thein_0736	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Thein_0747	PWY-6654	phosphopantothenate biosynthesis III
Thein_0752	PWY-7560	methylerythritol phosphate pathway II
Thein_0754	PWY-2301	<i>myo</i>-inositol biosynthesis
Thein_0754	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
Thein_0754	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
Thein_0754	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
Thein_0754	PWY-6664	di-myo-inositol phosphate biosynthesis
Thein_0755	PWY-5097	L-lysine biosynthesis VI
Thein_0756	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Thein_0756	PWY-6148	tetrahydromethanopterin biosynthesis
Thein_0756	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Thein_0756	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Thein_0760	PWY-5663	tetrahydrobiopterin biosynthesis I
Thein_0760	PWY-5664	tetrahydrobiopterin biosynthesis II
Thein_0760	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Thein_0760	PWY-6703	preQ<sub>0</sub> biosynthesis
Thein_0760	PWY-6983	tetrahydrobiopterin biosynthesis III
Thein_0760	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Thein_0768	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Thein_0770	PWY-5381	pyridine nucleotide cycling (plants)
Thein_0770	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Thein_0770	PWY-6596	adenosine nucleotides degradation I
Thein_0770	PWY-6606	guanosine nucleotides degradation II
Thein_0770	PWY-6607	guanosine nucleotides degradation I
Thein_0770	PWY-6608	guanosine nucleotides degradation III
Thein_0770	PWY-7185	UTP and CTP dephosphorylation I
Thein_0791	PWY-5316	nicotine biosynthesis
Thein_0791	PWY-7342	superpathway of nicotine biosynthesis
Thein_0798	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Thein_0798	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Thein_0798	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Thein_0798	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Thein_0798	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Thein_0798	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Thein_0798	PWY-7205	CMP phosphorylation
Thein_0798	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Thein_0798	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Thein_0798	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Thein_0798	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Thein_0798	PWY-7224	purine deoxyribonucleosides salvage
Thein_0798	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Thein_0798	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Thein_0799	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Thein_0799	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Thein_0799	PWY-6896	thiamin salvage I
Thein_0799	PWY-6897	thiamin salvage II
Thein_0821	PWY-6700	queuosine biosynthesis
Thein_0837	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Thein_0837	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Thein_0837	PWY-6268	adenosylcobalamin salvage from cobalamin
Thein_0837	PWY-6269	adenosylcobalamin salvage from cobinamide II
Thein_0839	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Thein_0839	PWY-7177	UTP and CTP dephosphorylation II
Thein_0839	PWY-7185	UTP and CTP dephosphorylation I
Thein_0844	PWY-5958	acridone alkaloid biosynthesis
Thein_0844	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Thein_0844	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Thein_0845	PWY-5958	acridone alkaloid biosynthesis
Thein_0845	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Thein_0845	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Thein_0846	PWY-5269	cardiolipin biosynthesis II
Thein_0846	PWY-5668	cardiolipin biosynthesis I
Thein_0854	PWY-6832	2-aminoethylphosphonate degradation II
Thein_0855	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Thein_0867	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
Thein_0872	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Thein_0872	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Thein_0873	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Thein_0873	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Thein_0873	PWY-5194	siroheme biosynthesis
Thein_0873	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Thein_0876	PWY-6823	molybdenum cofactor biosynthesis
Thein_0876	PWY-6891	thiazole biosynthesis II (Bacillus)
Thein_0876	PWY-6892	thiazole biosynthesis I (E. coli)
Thein_0876	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Thein_0886	PWY-6823	molybdenum cofactor biosynthesis
Thein_0887	PWY-5659	GDP-mannose biosynthesis
Thein_0887	PWY-6073	alginate biosynthesis I (algal)
Thein_0887	PWY-6082	alginate biosynthesis II (bacterial)
Thein_0887	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Thein_0888	PWY-1042	glycolysis IV (plant cytosol)
Thein_0888	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Thein_0888	PWY-5484	glycolysis II (from fructose 6-phosphate)
Thein_0888	PWY-7385	1,3-propanediol biosynthesis (engineered)
Thein_0895	PWY-6703	preQ<sub>0</sub> biosynthesis
Thein_0897	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Thein_0897	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Thein_0897	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Thein_0915	PWY-5269	cardiolipin biosynthesis II
Thein_0915	PWY-5668	cardiolipin biosynthesis I
Thein_0917	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Thein_0917	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Thein_0917	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Thein_0921	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Thein_0921	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Thein_0921	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Thein_0929	PWY-3461	L-tyrosine biosynthesis II
Thein_0929	PWY-3462	L-phenylalanine biosynthesis II
Thein_0929	PWY-6120	L-tyrosine biosynthesis III
Thein_0929	PWY-6627	salinosporamide A biosynthesis
Thein_0929	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Thein_0944	PWY-7425	2-chloroacrylate degradation I
Thein_0947	PWY-7183	pyrimidine nucleobases salvage I
Thein_0948	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Thein_0948	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Thein_0957	PWY-6164	3-dehydroquinate biosynthesis I
Thein_0991	PWY-5686	UMP biosynthesis
Thein_0992	PWY-5686	UMP biosynthesis
Thein_0996	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Thein_0996	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Thein_1014	PWY-1042	glycolysis IV (plant cytosol)
Thein_1014	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Thein_1014	PWY-5484	glycolysis II (from fructose 6-phosphate)
Thein_1014	PWY-5723	Rubisco shunt
Thein_1014	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Thein_1014	PWY-6886	1-butanol autotrophic biosynthesis
Thein_1014	PWY-6901	superpathway of glucose and xylose degradation
Thein_1014	PWY-7003	glycerol degradation to butanol
Thein_1014	PWY-7124	ethylene biosynthesis V (engineered)
Thein_1014	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Thein_1016	PWY-6700	queuosine biosynthesis
Thein_1033	PWY-5198	factor 420 biosynthesis
Thein_1038	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Thein_1038	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Thein_1038	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Thein_1038	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Thein_1041	PWY-2161	folate polyglutamylation
Thein_1048	PWY-6871	3-methylbutanol biosynthesis
Thein_1066	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Thein_1066	PWY-6167	flavin biosynthesis II (archaea)
Thein_1066	PWY-6168	flavin biosynthesis III (fungi)
Thein_1068	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Thein_1068	PWY-5686	UMP biosynthesis
Thein_1068	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Thein_1070	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Thein_1070	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Thein_1070	PWY-7185	UTP and CTP dephosphorylation I
Thein_1070	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Thein_1070	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Thein_1070	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Thein_1070	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Thein_1074	PWY-6700	queuosine biosynthesis
Thein_1085	PWY-6823	molybdenum cofactor biosynthesis
Thein_1085	PWY-6891	thiazole biosynthesis II (Bacillus)
Thein_1085	PWY-6892	thiazole biosynthesis I (E. coli)
Thein_1085	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Thein_1096	PWY-3221	dTDP-L-rhamnose biosynthesis II
Thein_1096	PWY-6808	dTDP-D-forosamine biosynthesis
Thein_1096	PWY-6942	dTDP-D-desosamine biosynthesis
Thein_1096	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Thein_1096	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Thein_1096	PWY-6974	dTDP-L-olivose biosynthesis
Thein_1096	PWY-6976	dTDP-L-mycarose biosynthesis
Thein_1096	PWY-7104	dTDP-L-megosamine biosynthesis
Thein_1096	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Thein_1096	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Thein_1096	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Thein_1096	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Thein_1096	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Thein_1096	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Thein_1096	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Thein_1096	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Thein_1098	PWY-622	starch biosynthesis
Thein_1104	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Thein_1105	PWY-4981	L-proline biosynthesis II (from arginine)
Thein_1105	PWY-4984	urea cycle
Thein_1105	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Thein_1115	PWY-5381	pyridine nucleotide cycling (plants)
Thein_1123	PWY-2941	L-lysine biosynthesis II
Thein_1123	PWY-2942	L-lysine biosynthesis III
Thein_1123	PWY-5097	L-lysine biosynthesis VI
Thein_1124	PWY-2941	L-lysine biosynthesis II
Thein_1124	PWY-5097	L-lysine biosynthesis VI
Thein_1125	PWY-2941	L-lysine biosynthesis II
Thein_1125	PWY-2942	L-lysine biosynthesis III
Thein_1125	PWY-5097	L-lysine biosynthesis VI
Thein_1126	PWY-2941	L-lysine biosynthesis II
Thein_1126	PWY-2942	L-lysine biosynthesis III
Thein_1126	PWY-5097	L-lysine biosynthesis VI
Thein_1137	PWY-5704	urea degradation II
Thein_1138	PWY-5704	urea degradation II
Thein_1139	PWY-5704	urea degradation II
Thein_1161	PWY-2201	folate transformations I
Thein_1161	PWY-3841	folate transformations II
Thein_1168	PWY-5278	sulfite oxidation III
Thein_1168	PWY-5340	sulfate activation for sulfonation
Thein_1168	PWY-6683	sulfate reduction III (assimilatory)
Thein_1168	PWY-6932	selenate reduction
Thein_1173	PWY-622	starch biosynthesis
Thein_1190	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Thein_1191	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Thein_1191	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Thein_1191	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Thein_1191	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Thein_1210	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Thein_1214	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Thein_1214	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Thein_1214	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Thein_1218	PWY-6749	CMP-legionaminate biosynthesis I
Thein_1226	PWY-5198	factor 420 biosynthesis
Thein_1226	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
Thein_1226	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
Thein_1244	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Thein_1244	PWY-7118	chitin degradation to ethanol
Thein_1247	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Thein_1280	PWY-622	starch biosynthesis
Thein_1299	PWY-3341	L-proline biosynthesis III
Thein_1299	PWY-4981	L-proline biosynthesis II (from arginine)
Thein_1299	PWY-6344	L-ornithine degradation II (Stickland reaction)
Thein_1300	PWY-4983	L-citrulline-nitric oxide cycle
Thein_1300	PWY-4984	urea cycle
Thein_1300	PWY-5	canavanine biosynthesis
Thein_1300	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Thein_1300	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Thein_1318	PWY-2301	<i>myo</i>-inositol biosynthesis
Thein_1318	PWY-4702	phytate degradation I
Thein_1318	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Thein_1319	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
Thein_1319	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Thein_1322	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Thein_1332	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Thein_1334	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Thein_1367	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Thein_1369	PWY-5057	L-valine degradation II
Thein_1369	PWY-5076	L-leucine degradation III
Thein_1369	PWY-5078	L-isoleucine degradation II
Thein_1369	PWY-5101	L-isoleucine biosynthesis II
Thein_1369	PWY-5103	L-isoleucine biosynthesis III
Thein_1369	PWY-5104	L-isoleucine biosynthesis IV
Thein_1369	PWY-5108	L-isoleucine biosynthesis V
Thein_1375	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Thein_1375	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Thein_1392	PWY-6683	sulfate reduction III (assimilatory)
Thein_1397	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Thein_1397	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Thein_1398	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Thein_1398	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Thein_1408	PWY-1042	glycolysis IV (plant cytosol)
Thein_1408	PWY-5484	glycolysis II (from fructose 6-phosphate)
Thein_1408	PWY-6901	superpathway of glucose and xylose degradation
Thein_1408	PWY-7003	glycerol degradation to butanol
Thein_1411	PWY-1042	glycolysis IV (plant cytosol)
Thein_1411	PWY-5484	glycolysis II (from fructose 6-phosphate)
Thein_1411	PWY-6886	1-butanol autotrophic biosynthesis
Thein_1411	PWY-6901	superpathway of glucose and xylose degradation
Thein_1411	PWY-7003	glycerol degradation to butanol
Thein_1412	PWY-1042	glycolysis IV (plant cytosol)
Thein_1412	PWY-5484	glycolysis II (from fructose 6-phosphate)
Thein_1412	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Thein_1412	PWY-7003	glycerol degradation to butanol
Thein_1414	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Thein_1422	PWY-5372	carbon tetrachloride degradation II
Thein_1422	PWY-6780	hydrogen production VI
Thein_1427	PWY-1622	formaldehyde assimilation I (serine pathway)
Thein_1427	PWY-5392	reductive TCA cycle II
Thein_1427	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Thein_1427	PWY-5690	TCA cycle II (plants and fungi)
Thein_1427	PWY-5913	TCA cycle VI (obligate autotrophs)
Thein_1427	PWY-6728	methylaspartate cycle
Thein_1427	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Thein_1427	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Thein_1427	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Thein_1433	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Thein_1433	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Thein_1433	PWY-6269	adenosylcobalamin salvage from cobinamide II
Thein_1445	PWY-6167	flavin biosynthesis II (archaea)
Thein_1484	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Thein_1514	PWY-2941	L-lysine biosynthesis II
Thein_1514	PWY-2942	L-lysine biosynthesis III
Thein_1514	PWY-5097	L-lysine biosynthesis VI
Thein_1514	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Thein_1514	PWY-6559	spermidine biosynthesis II
Thein_1514	PWY-6562	norspermidine biosynthesis
Thein_1514	PWY-7153	grixazone biosynthesis
Thein_1514	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Thein_1518	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Thein_1518	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Thein_1518	PWY-5989	stearate biosynthesis II (bacteria and plants)
Thein_1518	PWY-5994	palmitate biosynthesis I (animals and fungi)
Thein_1518	PWY-6113	superpathway of mycolate biosynthesis
Thein_1518	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Thein_1518	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Thein_1518	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Thein_1518	PWYG-321	mycolate biosynthesis
Thein_1523	PWY-5941	glycogen degradation II (eukaryotic)
Thein_1523	PWY-6724	starch degradation II
Thein_1523	PWY-6737	starch degradation V
Thein_1523	PWY-7238	sucrose biosynthesis II
Thein_1530	PWY-7560	methylerythritol phosphate pathway II
Thein_1541	PWY-6891	thiazole biosynthesis II (Bacillus)
Thein_1541	PWY-6892	thiazole biosynthesis I (E. coli)
Thein_1541	PWY-7560	methylerythritol phosphate pathway II
Thein_1546	PWY-5686	UMP biosynthesis
Thein_1560	PWY-6829	tRNA methylation (yeast)
Thein_1566	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Thein_1568	PWY-5667	CDP-diacylglycerol biosynthesis I
Thein_1568	PWY-5981	CDP-diacylglycerol biosynthesis III
Thein_1608	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Thein_1608	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Thein_1634	PWY-3781	aerobic respiration I (cytochrome c)
Thein_1634	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Thein_1634	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Thein_1634	PWY-6692	Fe(II) oxidation
Thein_1638	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Thein_1656	PWY-5958	acridone alkaloid biosynthesis
Thein_1656	PWY-6543	4-aminobenzoate biosynthesis
Thein_1656	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Thein_1656	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Thein_1656	PWY-6722	candicidin biosynthesis
Thein_1666	PWY-1042	glycolysis IV (plant cytosol)
Thein_1666	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Thein_1666	PWY-5484	glycolysis II (from fructose 6-phosphate)
Thein_1666	PWY-5723	Rubisco shunt
Thein_1666	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Thein_1666	PWY-6886	1-butanol autotrophic biosynthesis
Thein_1666	PWY-6901	superpathway of glucose and xylose degradation
Thein_1666	PWY-7003	glycerol degradation to butanol
Thein_1666	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Thein_1666	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Thein_1671	PWY-5340	sulfate activation for sulfonation
Thein_1682	PWY-3821	galactose degradation III
Thein_1682	PWY-6317	galactose degradation I (Leloir pathway)
Thein_1682	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Thein_1682	PWY-6527	stachyose degradation
Thein_1682	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Thein_1682	PWY-7344	UDP-D-galactose biosynthesis
Thein_1683	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Thein_1683	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Thein_1691	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Thein_1695	PWY-5381	pyridine nucleotide cycling (plants)
Thein_1695	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Thein_1703	PWY-6823	molybdenum cofactor biosynthesis
Thein_1720	PWY-4381	fatty acid biosynthesis initiation I
Thein_1762	PWY-5491	diethylphosphate degradation
Thein_1767	PWY-1622	formaldehyde assimilation I (serine pathway)
Thein_1767	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Thein_1767	PWY-5913	TCA cycle VI (obligate autotrophs)
Thein_1767	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Thein_1767	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Thein_1767	PWY-6549	L-glutamine biosynthesis III
Thein_1767	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Thein_1767	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Thein_1767	PWY-7124	ethylene biosynthesis V (engineered)
Thein_1789	PWY-5674	nitrate reduction IV (dissimilatory)
Thein_1798	PWY-5674	nitrate reduction IV (dissimilatory)
Thein_1804	PWY-5532	adenosine nucleotides degradation IV
Thein_1805	PWY-5316	nicotine biosynthesis
Thein_1805	PWY-5381	pyridine nucleotide cycling (plants)
Thein_1805	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Thein_1805	PWY-7342	superpathway of nicotine biosynthesis
Thein_1815	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Thein_1828	PWY-5913	TCA cycle VI (obligate autotrophs)
Thein_1828	PWY-6549	L-glutamine biosynthesis III
Thein_1828	PWY-6728	methylaspartate cycle
Thein_1828	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Thein_1828	PWY-7124	ethylene biosynthesis V (engineered)
Thein_1828	PWY-7254	TCA cycle VII (acetate-producers)
Thein_1828	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Thein_1837	PWY-6938	NADH repair
Thein_1841	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Thein_1841	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Thein_1841	PWY-6269	adenosylcobalamin salvage from cobinamide II
Thein_1842	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Thein_1842	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Thein_1842	PWY-6269	adenosylcobalamin salvage from cobinamide II
Thein_1844	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Thein_1844	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Thein_1849	PWY-5101	L-isoleucine biosynthesis II
Thein_1849	PWY-5103	L-isoleucine biosynthesis III
Thein_1849	PWY-5104	L-isoleucine biosynthesis IV
Thein_1849	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Thein_1850	PWY-5839	menaquinol-7 biosynthesis
Thein_1850	PWY-5844	menaquinol-9 biosynthesis
Thein_1850	PWY-5849	menaquinol-6 biosynthesis
Thein_1850	PWY-5890	menaquinol-10 biosynthesis
Thein_1850	PWY-5891	menaquinol-11 biosynthesis
Thein_1850	PWY-5892	menaquinol-12 biosynthesis
Thein_1850	PWY-5895	menaquinol-13 biosynthesis
Thein_1853	PWY-6823	molybdenum cofactor biosynthesis
Thein_1867	PWY-6123	inosine-5'-phosphate biosynthesis I
Thein_1867	PWY-6124	inosine-5'-phosphate biosynthesis II
Thein_1867	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Thein_1867	PWY-7234	inosine-5'-phosphate biosynthesis III
Thein_1872	PWY-6823	molybdenum cofactor biosynthesis
Thein_1874	PWY-6834	spermidine biosynthesis III
Thein_1875	PWY-40	putrescine biosynthesis I
Thein_1875	PWY-6305	putrescine biosynthesis IV
Thein_1877	PWY-6167	flavin biosynthesis II (archaea)
Thein_1877	PWY-6168	flavin biosynthesis III (fungi)
Thein_1877	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Thein_1878	PWY-6167	flavin biosynthesis II (archaea)
Thein_1878	PWY-6168	flavin biosynthesis III (fungi)
Thein_1890	PWY-6610	adenine and adenosine salvage IV
Thein_1897	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Thein_1898	PWY-5194	siroheme biosynthesis
Thein_1898	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Thein_1899	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Thein_1903	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Thein_1904	PWY-5194	siroheme biosynthesis
Thein_1904	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Thein_1905	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Thein_1909	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Thein_1909	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Thein_1911	PWY-7560	methylerythritol phosphate pathway II
Thein_1918	PWY-5101	L-isoleucine biosynthesis II
Thein_1918	PWY-5103	L-isoleucine biosynthesis III
Thein_1918	PWY-5104	L-isoleucine biosynthesis IV
Thein_1918	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Thein_1918	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Thein_1918	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Thein_1918	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Thein_1919	PWY-5101	L-isoleucine biosynthesis II
Thein_1919	PWY-5103	L-isoleucine biosynthesis III
Thein_1919	PWY-5104	L-isoleucine biosynthesis IV
Thein_1919	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Thein_1919	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Thein_1919	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Thein_1919	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Thein_1921	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Thein_1922	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Thein_1923	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Thein_1987	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Thein_1989	PWY-4381	fatty acid biosynthesis initiation I
Thein_1989	PWY-5743	3-hydroxypropanoate cycle
Thein_1989	PWY-5744	glyoxylate assimilation
Thein_1989	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Thein_1989	PWY-6679	jadomycin biosynthesis
Thein_1989	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Thein_2014	PWY-1042	glycolysis IV (plant cytosol)
Thein_2014	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Thein_2014	PWY-5484	glycolysis II (from fructose 6-phosphate)
Thein_2014	PWY-5723	Rubisco shunt
Thein_2014	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Thein_2014	PWY-6886	1-butanol autotrophic biosynthesis
Thein_2014	PWY-6901	superpathway of glucose and xylose degradation
Thein_2014	PWY-7003	glycerol degradation to butanol
Thein_2014	PWY-7124	ethylene biosynthesis V (engineered)
Thein_2014	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Thein_2016	PWY-6897	thiamin salvage II
Thein_2016	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Thein_2016	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Thein_2017	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Thein_2017	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Thein_2017	PWY-6897	thiamin salvage II
Thein_2017	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Thein_2017	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Thein_2017	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Thein_2017	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Thein_2019	PWY-5392	reductive TCA cycle II
Thein_2019	PWY-5537	pyruvate fermentation to acetate V
Thein_2019	PWY-5538	pyruvate fermentation to acetate VI
Thein_2019	PWY-5690	TCA cycle II (plants and fungi)
Thein_2019	PWY-5913	TCA cycle VI (obligate autotrophs)
Thein_2019	PWY-6728	methylaspartate cycle
Thein_2019	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Thein_2019	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Thein_2025	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Thein_2025	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Thein_2043	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Thein_2043	PWY-6683	sulfate reduction III (assimilatory)
Thein_2043	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Thein_2045	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Thein_2045	PWY-622	starch biosynthesis
Thein_2050	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Thein_2050	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Thein_2050	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Thein_2052	PWY-4041	&gamma;-glutamyl cycle
Thein_2052	PWY-5826	hypoglycin biosynthesis
Thein_2053	PWY-6840	homoglutathione biosynthesis
Thein_2053	PWY-7255	ergothioneine biosynthesis I (bacteria)
Thein_2081	PWY-5381	pyridine nucleotide cycling (plants)
Thein_2081	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Thein_2081	PWY-6596	adenosine nucleotides degradation I
Thein_2081	PWY-6606	guanosine nucleotides degradation II
Thein_2081	PWY-6607	guanosine nucleotides degradation I
Thein_2081	PWY-6608	guanosine nucleotides degradation III
Thein_2081	PWY-7185	UTP and CTP dephosphorylation I
Thein_2089	PWY-7560	methylerythritol phosphate pathway II
Thein_2101	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Thein_2136	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Thein_2140	PWY-3801	sucrose degradation II (sucrose synthase)
Thein_2140	PWY-6527	stachyose degradation
Thein_2140	PWY-6981	chitin biosynthesis
Thein_2140	PWY-7238	sucrose biosynthesis II
Thein_2140	PWY-7343	UDP-glucose biosynthesis
Thein_2150	PWY-7205	CMP phosphorylation
Thein_2165	PWY-6749	CMP-legionaminate biosynthesis I
Thein_2170	PWY-1042	glycolysis IV (plant cytosol)
Thein_2170	PWY-1622	formaldehyde assimilation I (serine pathway)
Thein_2170	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Thein_2170	PWY-5484	glycolysis II (from fructose 6-phosphate)
Thein_2170	PWY-5723	Rubisco shunt
Thein_2170	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Thein_2170	PWY-6886	1-butanol autotrophic biosynthesis
Thein_2170	PWY-6901	superpathway of glucose and xylose degradation
Thein_2170	PWY-7003	glycerol degradation to butanol
Thein_2170	PWY-7124	ethylene biosynthesis V (engineered)
Thein_2170	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Thein_2184	PWY-2201	folate transformations I
Thein_2184	PWY-3841	folate transformations II
Thein_2190	PWY-5372	carbon tetrachloride degradation II
Thein_2190	PWY-6780	hydrogen production VI
Thein_2191	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Thein_2191	PWY-2201	folate transformations I
Thein_2191	PWY-3841	folate transformations II
Thein_2191	PWY-5030	L-histidine degradation III
Thein_2191	PWY-5497	purine nucleobases degradation II (anaerobic)
Thein_2191	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Thein_2192	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Thein_2192	PWY-2161	folate polyglutamylation
Thein_2192	PWY-2201	folate transformations I
Thein_2192	PWY-3841	folate transformations II
Thein_2196	PWY-381	nitrate reduction II (assimilatory)
Thein_2196	PWY-5675	nitrate reduction V (assimilatory)
Thein_2196	PWY-6549	L-glutamine biosynthesis III
Thein_2196	PWY-6963	ammonia assimilation cycle I
Thein_2196	PWY-6964	ammonia assimilation cycle II
Thein_2200	PWY-6703	preQ<sub>0</sub> biosynthesis
Thein_2201	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Thein_2202	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Thein_2202	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Thein_2208	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Thein_2208	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Thein_2213	PWY-1341	phenylacetate degradation II (anaerobic)
Thein_2213	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
